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source: palm/trunk/SCRIPTS/mrun @ 195

Last change on this file since 195 was 193, checked in by raasch, 16 years ago
bugfix for last change in mrun
Property svn:keywords set to `Id`
File size: 147.0 KB

Rev	Line
[71]	1	#!/bin/ksh
[66]	2	# mrun - Plot-Shellskript
[169]	3	# $Id: mrun 193 2008-08-28 11:26:33Z steinfeld $
[1]	4
	5	# Prozedur zum Starten von Modellaeufen
	6
	7	# letzte Aenderung:
	8	# 03/03/94 - Siggi - Entwicklungsbeginn
	9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	11	# zelne Variable exportiert. Dies ist noetig, weil an-
	12	# sonsten irgendein Speicher ueberlaeuft und von mrun
	13	# aufgerufene Programme (z.B. stageout) mit Fehlern
	14	# abbrechen (too many arguments)
	15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	16	# defaultmaessig im RRZN-Profile eingeschaltet
	17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	18	# wegfallen
	19	# 25/04/00 - Siggi - Version 1.5
	20	# remote_addres und remote_user in return_addres bzw.
	21	# return_username umbenannt, return_username wird dem
	22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	23	# Neue Variable remote_username, die beim interaktiven
	24	# mrun-Aufruf zwingend ueber die neue Option -u oder
	25	# in der Konfigurationsdatei angegeben werden muss.
	26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	27	# Version 1.7
	28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	31	# zu bestimmen; Praeprozessoroptionen haben nun alle
	32	# die Form -Dtext=text, weil auf IBM sonst text durch
	33	# die leere Zeichenkette ersetzt wird
	34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	36	# (-D$OMP=OMP) in order to avoid problems with
	37	# OMP_NUM_THREADS
	38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	39	# tar files, one for each node used
	40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	42	# 17/01/05 - Siggi - job for data transfer to local machine now within
	43	# job class c1 (HLRN)
	44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	46	# base filename and cycle number
	47	# 16/02/05 - Gerald - hababai validated
	48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	49	# 29/03/05 - Marcus - berni*-en0 validated
	50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	51	# 24/04/05 - Siggi - netcdf support on lcmuk
	52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	54	# number) can now be used within interactive runs
	55	# 12/05/05 - Siggi - netcdf support on ibm
	56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	57	# 18/05/05 - Siggi - netcdf support on nec
	58	# 24/05/05 - Siggi - netcdf support on ibms
	59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	60	# to 30 seconds
	61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	62	# PATH is temporarily set)
	63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	64	# caused warnings in the job protocol
	65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	67	# removed
	68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	69	# realized by file attribute trpe
	70	# 28/10/05 - Siggi - if existing, the file extension is output in case
	71	# of missing input file - no job abort in case of
	72	# missing input files with file extensions
	73	# (preliminary solution)
	74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	76	# 07/12/05 - Siggi - gallego and elephanta admitted
	77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	79	# 20/01/06 - Siggi - cpp directive for ibmy
	80	# 09/02/06 - Siggi - ibmy admitted for batch mode
	81	# 13/04/06 - Siggi - ostria admitted
	82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	84	# optimization of OpenMP runs (option stacksize is
	85	# necessary for large gridpoint numbers because
	86	# otherwise a segmentation fault occurs)
	87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	90	# 20/09/06 - Marcus - add DVRP library on nech
	91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	92	# on local NAMELIST file ENVPAR
	93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	95	# 06/02/07 - Siggi - add DVRP library on lcmuk
	96	# 07/02/07 - Siggi - revision of source code handling, source code is
	97	# now expected in directory given by source_path and
	98	# not in the current working directory, source code
	99	# files provided in add_source_path are allways
	100	# compiled, source code to be compiled is allways
	101	# sampled in SOURCES_FOR_RUN_$fname which is a
	102	# subdirectory of the current working directory,
[5]	103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	104	# adapted for RIAM (neck)
[5]	105	# bugfix for cycle number of output file (extout)
	106	# all hpmuk-related code removed
[14]	107	# 14/02/07 - Siggi - dvrp support for neck added
[21]	108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	109	# mrun_path replaced by PALM_BIN,
	110	# all machines are calling interpret_config.x
[66]	111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	112	# output
[69]	113	# 16/03/07 - Siggi - adjustments for lctit
[78]	114	# 29/03/07 - Siggi - global revision transfered to batch job by new
	115	# option -G
[82]	116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	117	# + netcdf/dvrp-options are read from configuration
	118	# file, host identifier (local_host) is read from
	119	# config file, code related to ftp filetransfer
	120	# removed (incl. option -f)
[97]	121	# 19/06/07 - Siggi - time limit for cdata jobs increased
[102]	122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
	123	# if new option -Y (coupling) is given,
	124	# output of executables to aout_output removed,
	125	# messages are immediately written to stdout instead
[108]	126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
	127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
	128	# variables out to the nodes in coupled mode -disabled-
	129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
[109]	130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
	131	# environment variables out to the nodes in coupled mode
[118]	132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
	133	# suggestions
[122]	134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
	135	# argument -g group_number, admit all sla* node_usage
	136	# queues
[129]	137	# 30/10/07 - Marcus - further adjustments for queues on lctit
[149]	138	# 14/02/08 - Bjoern - link of restart files with long file name possible
	139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
	140	# true, mrun tries "ln -f" on local output and resorts
	141	# to "cp" or "cp -r" on error
[164]	142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
	143	# which allows the user to choose his own job catalog
	144	# by setting job_catalog in the configuration file
	145	# (default is ~/job_queue),
[172]	146	# workaround for mpiexec with -env option,
[164]	147	# adjustments for lcxt4 (Bergen Center for Computational
	148	# Science)
[183]	149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
	150	# true, mrun tries "ln -f" on local input and resorts
	151	# to "cp" or "cp -r" on error
[180]	152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
[179]	153	# 14/07/08 - Siggi - adjustments for lcsgih
[188]	154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
[1]	155
	156	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	157
	158	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	159	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	160	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	161
	162	AddFilenames=""
	163	additional_conditions=""
	164	add_source_path=""
	165	afname=""
	166	archive_save=true
	167	archive_system=none
	168	compiler_name=""
	169	cond1=""
	170	cond2=""
	171	config_file=.mrun.config
	172	cpp_opts=""
[82]	173	cpp_options=""
[1]	174	cpumax=0
	175	cpurest=0
	176	delete_temporary_catalog=true
	177	do_batch=false
	178	do_compile=true
	179	do_remote=false
	180	do_stagein=true
	181	do_stageout=true
	182	do_trace=false
	183	email_notification=""
	184	exclude=""
	185	executable=""
	186	execution_error=false
[67]	187	fimm=false
[1]	188	fname=test
	189	fromhost=""
[78]	190	global_revision=""
[122]	191	group_number=none
[1]	192	host=""
	193	host_file=""
	194	hp=""
	195	ignore_archive_error=false
	196	input_list=""
	197	interpreted_config_file=""
[164]	198	job_catalog="~/job_queue"
[1]	199	job_on_file=""
	200	keep_data_from_previous_run=false
[183]	201	link_local_input=false
[149]	202	link_local_output=false
[1]	203	localhost_realname=$(hostname)
	204	local_compile=false
	205	locat=normal
	206	mainprog=""
	207	makefile=""
	208	mc=$0
	209	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	210	do
	211	mc=`echo $mc \| cut -f2- -d"/"`
	212	done
	213	module_files=""
	214	mrun_script_name=$mc
[82]	215	netcdf_inc=""
	216	netcdf_lib=""
[1]	217	netcdf_support=false
	218	node_usage=default
	219	numprocs=""
	220	OOPT=""
	221	openmp=false
	222	output_list=""
	223	package_list=""
	224	punkte="..........................................................."
	225	queue=none
	226	read_from_config=""
[5]	227	restart_run=false
[146]	228	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	229	if [[ $return_addres = 130.75.105.158 ]]
	230	then
	231	return_addres=172.20.25.41
	232	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	233	fi
	234	# if [[ $return_addres = 210.117.65.1 ]]
	235	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
	236	# then
	237	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
	238	# fi
	239	return_password=""
	240	return_username=$LOGNAME
	241	remotecall=false
	242	remote_username=""
[102]	243	run_coupled_model=false
[1]	244	run_mode=""
	245	scirocco=false
	246	store_on_archive_system=true
	247	striche=" ----------------------------------------------------------------------------"
	248	silent=false
	249	source_list=""
	250	source_path=SOURCE
	251	tasks_per_node=""
	252	threads_per_task=1
	253	tmpcreate=false
	254	tmp_data_catalog=""
	255	transfer_problems=false
	256	usern=$LOGNAME
	257	working_directory=`pwd`
	258	TOPT=""
	259	XOPT=""
	260	zeit=$( date \| cut -c 12-19 )
	261
	262	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
[102]	263	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
[1]	264
[66]	265	typeset -R30 calltime
[1]	266	typeset -L20 spalte1
	267	typeset -L40 spalte2
	268	typeset -L60 spalte3
	269	typeset -L35 string1=`date`
	270	typeset -L12 string2=$usern
	271	typeset -L12 string3=$localhost_realname
	272	typeset -L12 string4
	273	typeset -L12 string5
[169]	274	typeset -L30 version="MRUN 2.0 Rev$Rev: 164 $"
[1]	275
	276
	277
	278	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	279	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	280
	281	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	282	# EXPORTIERT WERDEN
	283	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
[127]	284	export group_number input_list memory numprocs output_list queue run_mode
[1]	285
	286
	287
	288	# FEHLERBEHANDLUNG
	289	# BEI EXIT:
[83]	290	trap 'rm -rf $working_directory/tmp_mrun
[69]	291	if [[ $locat != localhost ]]
[1]	292	then
[22]	293	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	294	# then
	295	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	296	#MRUN-calls on $localhost
	297	#
	298	#date and time user localhost remotehost termination mrun-command
	299	#--------------------------------------------------------------------------------------------------------------------
	300	#%STATEND%
	301	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	302	# fi
	303	#
	304	# # EINTRAG IN DIE STATISTIK-DATEI
	305	# string4=$host
	306	# string5=$locat
	307	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	308	# then
	309	# if [[ $do_batch = true ]]
	310	# then
	311	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	312	# else
	313	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	314	# fi
	315	# fi
[69]	316	echo " " > /dev/null
[1]	317	fi
	318
	319	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	320	then
	321
	322	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	323	(( i = 0 ))
	324	while (( i < iec ))
	325	do
	326	(( i = i + 1 ))
	327	printf "\n *** Execution of ERROR-command:\n"
	328	printf " >>> ${err_command[$i]}\n"
	329	eval ${err_command[$i]}
	330	done
	331	if [[ -n $interpreted_config_file ]] then
	332	rm -rf $interpreted_config_file
	333	fi
[71]	334	if [[ -n .mrun_environment ]] then
	335	rm -rf .mrun_environment
	336	fi
[1]	337	if [[ $tmpcreate = true ]]
	338	then
	339	printf "\n *** Contents of \"$TEMPDIR\":\n"
	340	ls -al; cd
	341	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	342	fi
	343	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	344	then
	345	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	346	fi
	347	printf "\n\n+++ MRUN killed \n\n"
	348	elif [[ $locat != control_c ]]
	349	then
	350	printf "\n\n --> all actions finished\n\n"
	351	printf " Bye, bye $usern !!\n\n"
	352	fi' exit
	353
	354
	355	# BEI TERMINAL-BREAK:
[83]	356	trap 'rm -rf $working_directory/tmp_mrun
[69]	357	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	358	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	359	then
	360	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	361	fi
	362	printf "\n+++ MRUN killed by \"^C\" \n\n"
	363	locat=control_c
	364	exit
	365	' 2
	366
	367
[22]	368	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	369	# BEEN SET
	370	if [[ "$PALM_BIN" = "" ]]
	371	then
	372	printf "\n +++ environment variable PALM_BIN has not been set"
	373	printf "\n please set it to the directory where the PALM scripts are located"
	374	locat=palm_bin; exit
	375	fi
[180]	376	export PATH=$PALM_BIN:$PATH
[22]	377
	378
[1]	379
	380	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	381	# FUER FOLGEJOBS BENOETIGT WIRD
[122]	382	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
[1]	383	do
	384	case $option in
	385	(a) afname=$OPTARG;;
	386	(A) store_on_archive_system=false; mc="$mc -A";;
	387	(b) do_batch=true; mc="$mc -b";;
	388	(B) delete_temporary_catalog=false; mc="$mc -B";;
	389	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	390	(C) restart_run=true; mc="$mc -C";;
[1]	391	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
	392	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
[79]	393	(F) job_on_file="-D"; mc="$mc -F";;
[122]	394	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
[78]	395	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	396	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	397	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	398	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	399	(I) ignore_archive_error=true; mc="$mc -I";;
	400	(k) keep_data_from_previous_run=true; mc="$mc -k";;
	401	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
	402	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	403	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	404	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	405	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	406	(O) use_openmp=true; mc="$mc -O";;
	407	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	408	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	409	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	410	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	411	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	412	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	413	(S) read_from_config=false; mc="$mc -S";;
	414	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	415	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	416	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	417	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	418	(v) silent=true; mc="$mc -v";;
	419	(x) do_trace=true;set -x; mc="$mc -x";;
	420	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
[102]	421	(Y) run_coupled_model=true; mc="$mc -Y";;
[1]	422	(\?) printf "\n +++ unknown option $OPTARG \n"
	423	printf "\n --> type \"$0 ?\" for available options \n"
	424	locat=parameter;exit;;
	425	esac
	426	done
	427
	428
	429	# EVTL. POSITIONSPARAMETER EINLESEN
	430	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	431	shift OPTIND-1
	432
	433
	434	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	435	if [[ "$1" = "?" ]]
	436	then
	437	(printf "\n *** mrun can be called as follows:\n"
	438	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
	439	printf "\n Description of available options:\n"
	440	printf "\n Option Description Default-Value"
	441	printf "\n -a base name of input files equiv. -d"
	442	printf "\n -A no archiving when using file-attribute fl"
	443	printf "\n -b batch-job on local machine ---"
	444	printf "\n -B do not delete temporary directory at end ---"
	445	printf "\n -c configuration file .mrun.config"
	446	printf "\n -d base name of files attached to program test"
	447	printf "\n -D preprocessor(cpp)-directives \"\" "
	448	printf "\n -F create remote job file only ---"
	449	printf "\n -h execution host $localhost_realname"
	450	printf "\n -i INPUT control list \"\" "
	451	printf "\n -I archiving errors of previous batch-jobs"
	452	printf "\n will be ignored"
	453	printf "\n -k keep data from previous run"
	454	printf "\n -K additional conditions for controling"
	455	printf "\n usage of conditional code and"
	456	printf "\n env-variables in configuration file \"\" "
	457	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	458	printf "\n -M Makefile name Makefile"
	459	printf "\n -n node usage (shared/not_shared) depending on -h"
	460	printf "\n -o OUTPUT control list \"\" "
	461	printf "\n -O use OpenMP ---"
	462	printf "\n -p software package list \"\" "
	463	printf "\n -q queue \"$queue\" "
	464	printf "\n -r run control list (combines -i -o) \"\" "
	465	printf "\n -s filenames of routines to be compiled \"\" "
	466	printf "\n must end with .f, .f90, .F, or .c !"
	467	printf "\n use \"..\" for more than one file and wildcards"
	468	printf "\n -s TEST compiles all files with w-permit"
	469	printf "\n -S config file interpreted by shellscript ---"
	470	printf "\n -t allowed cpu-time in seconds (batch) 0"
	471	printf "\n -T tasks per node depending on -h"
	472	printf "\n -u username on remote machine \"\" "
	473	printf "\n -v no prompt for confirmation ---"
	474	printf "\n -x tracing of mrun for debug purposes ---"
	475	printf "\n -X # of processors (on parallel machines) 1"
[102]	476	printf "\n -Y run coupled model ---"
[1]	477	printf "\n "
	478	printf "\n Possible values of positional parameter <modus>:"
	479	printf "\n \"?\" - this outline \n\n") \| more
	480	exit
	481	elif [[ "$1" != "" ]]
	482	then
	483	printf "\n +++ positional parameter $1 unknown \n"
	484	locat=parameter; exit
	485	fi
	486
	487
	488
	489	# KURZE STARTMELDUNG
	490	printf "\n*** $version "
	491	printf "\n will be executed. Please wait ..."
	492
	493
[82]	494
	495	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	496	if [[ ! -f $config_file ]]
	497	then
	498	printf "\n\n +++ configuration file: "
	499	printf "\n $config_file"
	500	printf "\n does not exist"
	501	locat=connect; exit
	502	fi
	503
	504
	505	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	506	line=""
	507	grep "%host_identifier" $config_file > tmp_mrun
	508	while read line
	509	do
	510	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
	511	then
	512	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	513	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	514	if [[ $localhost_realname = $HOSTNAME ]]
[82]	515	then
	516	localhost=$host_identifier
	517	break
	518	fi
	519	fi
	520	done < tmp_mrun
	521
	522	if [[ "$localhost" = "" ]]
	523	then
	524	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	525	printf "\n for local host \"$localhost_realname\"."
	526	printf "\n Please add line"
	527	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	528	printf "\n to the configuration file."
	529	locat=localhost; exit
	530	fi
	531
	532
	533
	534	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	535	case $localhost_realname in
	536	(breg-en0\|berni-en0) archive_system=tivoli;;
	537	(cs*) archive_system=ut;;
	538	(fimm.bccs.uib.no) fimm=true;;
	539	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	540	(hreg-en0\|hanni-en0) archive_system=tivoli;;
	541	(scirocco) scirocco=true;;
	542	esac
	543
	544
	545
[1]	546	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	547	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	548	[[ "$afname" = "" ]] && afname=$fname
	549
	550
	551	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	552	if [[ "$run_mode" != "" ]]
	553	then
	554	input_list="$input_list $run_mode"
	555	output_list="$output_list $run_mode"
	556	fi
	557
	558
	559	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	560	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	561	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	562	# STARTET)
	563	if [[ "$fromhost" = "" ]]
	564	then
	565	fromhost=$localhost
	566	fi
	567
	568
	569	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	570	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	571	then
	572	source_list=TEST
	573	local_compile=true
	574	host=$localhost
	575	fi
	576
	577
	578	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	579	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	580	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	581	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	582	if [[ -n $host && "$host" != $localhost ]]
	583	then
	584	do_batch=true
	585	do_remote=true
	586	case $host in
[181]	587	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lcsgib\|lcsgih\|lctit\|unics) true;;
[1]	588	(*) printf "\n"
[83]	589	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	590	printf "\n is not available"
[1]	591	locat=nqs; (( iec = 0 )); exit;;
	592	esac
	593	else
	594	host=$localhost
	595	fi
	596
	597
	598	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	599	if [[ -n $additional_conditions ]]
	600	then
[69]	601	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	602	cond1=`echo $additional_conditions \| cut -d" " -f1`
	603	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	604	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	605	if [[ -n $dummy ]]
	606	then
	607	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	608	locat=options; exit
	609	fi
	610	fi
	611
	612
	613	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	614	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	615	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	616	then
	617	if [[ $ignore_archive_error = false ]]
	618	then
	619	printf "\n +++ data archiving of previous run failed"
	620	printf "\n see directory \~/job_queue on remote machine"
	621	locat=archive; exit
	622	else
	623	printf "\n +++ warning: data archiving in a previous run failed"
	624	printf "\n MRUN continues, trying to get backup copy"
	625	fi
	626	fi
	627
	628
	629
	630	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	631	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	632	if [[ "$read_from_config" = false ]]
	633	then
	634
	635	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	636	while read zeile
	637	do
	638	[[ $silent = false ]] && printf "."
	639
	640
	641	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	642	# ERSETZEN
	643	eval zeile=\"$zeile\"
	644
	645
	646	# INTERPRETATION DER ZEILE
[21]	647	if [[ "$(echo $zeile)" = "" ]]
[1]	648	then
[21]	649	# LEERZEILE, KEINE AKTION
	650	continue
[1]	651
[21]	652	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	653	then
	654
[1]	655	# ZEILE IST KOMMENTARZEILE
	656	true
	657
	658	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	659	then
	660
	661	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	662	zeile=$(echo $zeile \| cut -c2-)
[69]	663	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	664	var=`echo $zeile \| cut -d" " -f1`
	665	value=`echo $zeile \| cut -d" " -s -f2`
	666	for_host=`echo $zeile \| cut -d" " -s -f3`
	667	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	668	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	669
	670	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	671	then
	672
	673	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	674	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	675	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	676
	677
	678	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	679	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	680	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	681	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	682	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	683	# KONFIGURATIONSDATEI
	684	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	685	then
	686	eval $var=\$value
	687
	688	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	689	if [[ $do_trace = true ]]
	690	then
	691	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	692	fi
	693	fi
	694
	695	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	696	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	697	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	698	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	699	if [[ $var = host ]]
	700	then
	701	if [[ -n $host && "$host" != $localhost ]]
	702	then
	703	do_batch=true
	704	do_remote=true
	705	case $host in
[181]	706	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
[83]	707	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	708	printf "\n is not available"
[1]	709	locat=nqs; exit;;
	710	esac
	711	else
	712	host=$localhost
	713	fi
	714	fi
	715
	716	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	717	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	718	# DEN PROGRAMMEN BENOETIGT WERDEN
	719	export $var
	720	fi
	721
	722
	723
	724
	725	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	726	then
	727
	728	# ZEILE DEFINIERT ERROR-KOMMANDO
	729	(( iec = iec + 1 ))
	730	zeile=$(echo $zeile \| cut -c4-)
	731	err_command[$iec]="$zeile"
	732
	733	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	734	then
	735
	736	# ZEILE DEFINIERT INPUT-KOMMANDO
	737	(( iic = iic + 1 ))
	738	zeile=$(echo $zeile \| cut -c4-)
	739	in_command[$iic]="$zeile"
	740
	741	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	742	then
	743
	744	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	745	(( ioc = ioc + 1 ))
	746	zeile=$(echo $zeile \| cut -c4-)
	747	out_command[$ioc]="$zeile"
	748
	749	else
	750
	751	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	752	# s2a: in/out - Feld
	753	# s2b: loc - Feld (optional)
	754	# s2c: tr/ar - Feld (optional)
[69]	755	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	756	s1=`echo $zeile \| cut -d" " -f1`
	757	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	758	s2a=$(echo $s2 \| cut -d":" -f1)
	759	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	760	then
	761	s2b=""
	762	s2c=""
	763	else
[69]	764	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	765	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	766	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	767	fi
[69]	768	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	769	s3=`echo $zeile \| cut -d" " -f3`
	770	s4=`echo $zeile \| cut -d" " -s -f4`
	771	s5=`echo $zeile \| cut -d" " -s -f5`
	772	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	773
	774
	775	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	776	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	777	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	778	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	779	# HANDEN SEIN MUSS (D.H. s2b = loc)
	780	IFSALT="$IFS"; IFS="$IFS:"
	781	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	782	then
	783	found=false
	784	for actual in $input_list
	785	do
	786	for formal in $s3
	787	do
	788	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	789	done
	790	done
	791	if [[ $found = true ]]
	792	then
	793	(( iin = iin + 1 ))
	794	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	795	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	796	extin[$iin]=$s6
	797	fi
	798	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	799	then
	800	found=false
	801	for actual in $output_list
	802	do
	803	for formal in $s3
	804	do
	805	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	806	done
	807	done
	808	if [[ $found = true ]]
	809	then
	810	(( iout = iout + 1 ))
	811	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	812	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	813	fi
	814	elif [[ "$s2a" != in && "$s2a" != out ]]
	815	then
	816	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	817	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	818	locat=connect; exit
	819	fi
	820	IFS="$IFSALT"
	821	fi
	822	done < $config_file
	823
	824	else
	825
	826
	827	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	828	[[ $silent = false ]] && printf "..."
	829	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	830	export interpreted_config_file=.icf.$RANDOM
	831
	832
[69]	833
	834	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	835	# VERFUEGUNG STELLEN
	836	cat > .mrun_environment << %%END%%
	837	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	838	config_file = '$config_file', do_remote = '$do_remote',
	839	do_trace = '$do_trace', host = '$host',
	840	input_list = '$input_list', icf = '$interpreted_config_file',
	841	localhost = '$localhost', output_list = '$output_list' /
	842
	843	%%END%%
	844
	845	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	846	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	847	mrun_memory=$memory
[127]	848	mrun_group_number=$group_number
[69]	849	mrun_cpumax=$cpumax
	850	mrun_numprocs=$numprocs
	851
[66]	852	if [[ $localhost_realname = "gate" ]]
	853	then
	854	interpret_config_gate.x
	855	else
	856	interpret_config.x
	857	fi
[71]	858	rm .mrun_environment
[1]	859
[71]	860
[1]	861	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	862	chmod u+x $interpreted_config_file
	863	export PATH=$PATH:.
	864	. $interpreted_config_file
[71]	865	rm $interpreted_config_file
[1]	866
[71]	867
[69]	868	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	869	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
[127]	870	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
[71]	871	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	872	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	873
[1]	874	fi
	875
	876
	877	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	878	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	879	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	880	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	881	if [[ "$SOURCES_COMPLETE" = "" ]]
	882	then
	883
	884	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	885	# VEREINBART WURDE
	886	source_path=""
	887	line=""
	888	grep "%source_path" $config_file > tmp_mrun
	889	while read line
	890	do
	891	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	892	then
	893	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	894	then
	895	global_source_path=`echo $line \| cut -d" " -f2`
	896	fi
	897	fi
	898	done < tmp_mrun
	899
	900	line=""
	901	found=false
	902	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	903	while read line
	904	do
	905	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	906	then
	907	if [[ $found = true ]]
	908	then
	909	printf "\n\n +++ more than one source path found in configuration file"
	910	printf "\n for local host \"$localhost\" "
	911	locat=source_path; exit
	912	fi
	913	source_path=`echo $line \| cut -d" " -f2`
	914	found=true
	915	fi
	916	done < tmp_mrun
	917	rm tmp_mrun
	918
	919	if [[ "$source_path" = "" ]]
	920	then
	921	if [[ "$global_source_path" != "" ]]
	922	then
	923	source_path=$global_source_path
	924	else
	925	printf "\n\n +++ no source path found in configuration file"
	926	printf "\n for local host \"$localhost\" "
	927	locat=source_path; exit
	928	fi
	929	fi
	930	eval source_path=$source_path
	931
	932	if [[ ! -d $source_path ]]
	933	then
	934	printf "\n\n +++ source path \"$source_path\" on local host"
	935	printf "\n \"$localhost\" does not exist"
	936	locat=source_path; exit
	937	fi
	938
	939	fi
	940
	941
[78]	942	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	943	# DURCH OPTION -G MITGETEILT)
	944	if [[ "$global_revision" = "" ]]
	945	then
	946	global_revision=`svnversion $source_path 2>/dev/null`
	947	global_revision="Rev: $global_revision"
	948	fi
[1]	949
[78]	950
[1]	951	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	952	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	953	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	954	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	955	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	956	if [[ -n $host && "$host" != $localhost ]]
	957	then
	958	do_batch=true
	959	do_remote=true
	960	case $host in
[181]	961	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
[1]	962	(*) printf "\n"
[83]	963	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	964	printf "\n is not available"
[1]	965	locat=nqs; (( iec = 0 )); exit;;
	966	esac
	967	else
	968	host=$localhost
	969	fi
	970
	971
	972	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	973	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	974	then
	975
	976	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	977	if [[ ! -n $numprocs ]]
	978	then
	979	printf "\n"
	980	printf "\n +++ option \"-K parallel\" requires additional specification"
	981	printf "\n of the number of processors to be used by"
	982	printf "\n mrun-option \"-X\" or by environment-variable"
	983	printf "\n \"numprocs\" in the configuration file"
	984	locat=numprocs; (( iec = 0 )); exit
	985	fi
	986
	987	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	988	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	989	# GESAMTPROZESSORANZAHL IST
	990	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
	991	then
	992	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	993	(( ival = $tasks_per_node ))
	994	(( pes = numprocs ))
	995	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	996	# then
	997	# (( pes = pes - 1 ))
	998	# fi
	999	(( ii = pes / ival ))
	1000	if (( pes - ii * ival > 0 ))
	1001	then
	1002	printf "\n"
	1003	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	1004	printf "\n divisor of the total number of processors (option \"-X\")"
	1005	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1006	locat=tasks_per_node; (( iec = 0 )); exit
	1007	fi
	1008	fi
	1009
	1010	# IBMY HAT NUR EINEN KNOTEN
	1011	if [[ $host = ibmy ]]
	1012	then
	1013	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	1014	then
	1015	printf "\n"
	1016	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	1017	printf "\n total number of processors (option \"-X\")"
	1018	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1019	locat=tasks_per_node; (( iec = 0 )); exit
	1020	fi
	1021	fi
	1022
	1023	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	1024	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	1025	if [[ $use_openmp = true ]]
	1026	then
	1027	threads_per_task=$tasks_per_node
	1028	tasks_per_node=1
	1029	fi
	1030	OOPT="-O $threads_per_task"
	1031	TOPT="-T $tasks_per_node"
	1032
	1033	# GESAMTZAHL DER KNOTEN BESTIMMEN
	1034	if [[ "$tasks_per_node" != "" ]]
	1035	then
	1036	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	1037	fi
	1038
	1039	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	1040	# SETZEN
	1041	if [[ $node_usage = default ]]
	1042	then
	1043	if [[ $host = ibms ]]
	1044	then
	1045	node_usage=shared
[118]	1046	elif [[ $host = lctit ]]
	1047	then
[129]	1048	node_usage=sla3
[181]	1049	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
	1050	then
	1051	node_usage=singlejob
[1]	1052	else
	1053	node_usage=not_shared
	1054	fi
	1055	fi
[181]	1056
	1057	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
[1]	1058	then
	1059	printf "\n"
	1060	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1061	printf "\n \"shared\" or \"not_shared\""
	1062	locat=tasks_per_node; (( iec = 0 )); exit
	1063	fi
	1064
	1065	fi
	1066
	1067	# PRUEFEN, OB HOSTFILE EXISTIERT
	1068	if [[ -n $hostfile ]]
	1069	then
	1070	if [[ ! -f $hostfile ]]
	1071	then
	1072	printf "\n"
	1073	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1074	locat=hostfile; exit
	1075	fi
	1076	fi
	1077
	1078	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1079	if [[ $host = ibmy && $do_remote = false ]]
	1080	then
	1081	if [[ ! -f $HOME/.rhosts ]]
	1082	then
	1083	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1084	printf "\n\n *** file:"
	1085	printf "\n $HOME/.rhosts"
	1086	printf "\n was created\n"
	1087	fi
	1088	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1089	then
	1090	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1091	printf "\n\n *** file:"
	1092	printf "\n $HOME/.rhosts"
	1093	printf "\n was extended by the name of the current host\n"
	1094	fi
	1095	fi
	1096
	1097
	1098
	1099	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1100	if [[ $queue = none ]]
	1101	then
	1102	case $host in
	1103	(ibmb) if [[ $node_usage = shared ]]
	1104	then
	1105	queue=cshare
	1106	else
	1107	queue=csolo
	1108	fi;;
	1109	(ibmh) if [[ $node_usage = shared ]]
	1110	then
	1111	queue=cshare
	1112	else
	1113	queue=csolo
	1114	fi;;
	1115	(ibmy) queue=parallel;;
[191]	1116	(lcsgib) queue=bigq;;
	1117	(lcsgih) queue=bigq;;
[129]	1118	(lctit) queue=sla3;;
[1]	1119	(nech) queue=none;;
	1120	(neck) queue=P;;
	1121	(unics) queue=unics;;
	1122	esac
	1123	fi
	1124
	1125
	1126	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1127	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1128	# ERMITTELN
	1129	(( i = 0 ))
	1130	while (( i < iin ))
	1131	do
	1132	(( i = i + 1 ))
	1133	(( maxcycle = 0 ))
	1134
	1135	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1136	if [[ "${actionin[$i]}" = di ]]
	1137	then
	1138	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1139	# REM-MASCHINE AUSWERTEN
	1140	eval filename=${pathin[$i]}/${endin[$i]}
	1141	else
	1142	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1143	# REM-MASCHINE AUSWERTEN
	1144	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1145	fi
	1146
	1147	# PRUEFEN AUF VORHANDENSEIN
	1148	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1149	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1150	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1151	then
	1152	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1153	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1154	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1155	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1156	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1157	if [[ "${transin[$i]}" != "locopt" ]]
	1158	then
	1159	printf "\n\n +++ INPUT-file: "
	1160	if [[ "${extin[$i]}" = "" ]]
	1161	then
	1162	printf "\n $filename"
	1163	else
	1164	printf "\n $filename.${extin[$i]}"
	1165	fi
	1166	printf "\n does not exist\n"
	1167	locat=input; exit
	1168	else
	1169	transin[$i]="unavailable"
	1170	fi
	1171	else
	1172
	1173	# ZYKLUSNUMMER FESTSTELLEN
	1174	ls -1 -d $filename > filelist 2>/dev/null
	1175	ls -1 -d $filename.* >> filelist 2>/dev/null
	1176	while read zeile
	1177	do
	1178	cycle=$(print $zeile \| cut -f2 -d".")
	1179	if [[ "$cycle" = "$zeile" ]]
	1180	then
	1181	(( icycle = 0 ))
	1182	elif [[ "$cycle" = "${extin[$i]}" ]]
	1183	then
	1184	(( icycle = 0 ))
	1185	else
	1186	(( icycle = $cycle ))
	1187	fi
	1188	if (( icycle > maxcycle ))
	1189	then
	1190	(( maxcycle = icycle ))
	1191	file_to_be_used=$zeile
	1192	fi
	1193	done <filelist
	1194	rm filelist
	1195
	1196	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1197	if (( maxcycle > 0 ))
	1198	then
	1199	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1200	then
	1201	filename=${filename}.$maxcycle.${extin[$i]}
	1202	else
	1203	filename=${filename}.$maxcycle
	1204	fi
	1205	else
	1206	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1207	then
	1208	filename=${filename}.${extin[$i]}
	1209	fi
	1210	fi
	1211
	1212	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1213	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1214	absnamein[$i]=$filename
	1215	if (( maxcycle > 0 ))
	1216	then
	1217	if [[ "${actionin[$i]}" = di ]]
	1218	then
	1219	frelin[$i]=${endin[$i]}.$maxcycle
	1220	else
	1221	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1222	fi
	1223	else
	1224	if [[ "${actionin[$i]}" = di ]]
	1225	then
	1226	frelin[$i]=${endin[$i]}
	1227	else
	1228	frelin[$i]=${afname}${endin[$i]}
	1229	fi
	1230	fi
	1231
	1232	fi
	1233	done
	1234
	1235
	1236	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1237	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1238	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1239	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1240	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1241	(( i = 0 ))
	1242	while (( i < iout ))
	1243	do
	1244	(( i = i + 1 ))
	1245	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1246	then
	1247	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
	1248	then
	1249	actionout[$i]=""
	1250	elif [[ "${actionout[$i]}" = tra ]]
	1251	then
	1252	actionout[$i]=a
	1253	fi
	1254	(( maxcycle = 0 ))
	1255	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1256	eval catalogname=${pathout[$i]}
	1257	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1258	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1259	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1260	then
	1261
	1262	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1263	if cat /dev/null > $filename
	1264	then
	1265	rm $filename
	1266	else
	1267
	1268	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1269	if [[ ! -d $catalogname ]]
	1270	then
	1271	if mkdir -p $catalogname
	1272	then
	1273	printf "\n\n *** directory:"
	1274	printf "\n $catalogname"
	1275	printf "\n was created\n"
	1276	else
	1277	printf "\n\n +++ OUTPUT-file:"
	1278	printf "\n $filename"
	1279	printf "\n cannot be created, because directory does not exist"
	1280	printf "\n and cannot be created either"
	1281	printf "\n"
	1282	locat=output ; exit
	1283	fi 2>/dev/null
	1284	else
	1285	printf "\n\n +++ OUTPUT-file:"
	1286	printf "\n $filename"
	1287	printf "\n cannot be created, although directory exists"
	1288	printf "\n"
	1289	locat=output ; exit
	1290	fi
	1291	fi 2>/dev/null
	1292	else
	1293
	1294	# ZYKLUSNUMMER FESTSTELLEN
	1295	ls -1 -d $filename > filelist 2>/dev/null
	1296	ls -1 -d $filename.* >> filelist 2>/dev/null
	1297	while read zeile
	1298	do
	1299	cycle=$(print $zeile \| cut -f2 -d".")
	1300	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1301	then
	1302	(( icycle = 1 ))
	1303	else
	1304	(( icycle = $cycle + 1 ))
	1305	fi
	1306	if (( icycle > maxcycle ))
	1307	then
	1308	(( maxcycle = icycle ))
	1309	fi
	1310	done <filelist
	1311	rm filelist
	1312	fi
	1313
	1314	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1315	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1316	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1317	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1318	if [[ "${actionout[$i]}" != a ]]
	1319	then
	1320	if (( maxcycle > 0 ))
	1321	then
	1322	filename=${filename}.$maxcycle
	1323	if cat /dev/null > $filename
	1324	then
	1325	rm $filename
	1326	else
	1327	printf "\n +++ OUTPUT-file:"
	1328	printf "\n $filename"
	1329	printf "\n cannot be created"
	1330	locat=output ; exit
	1331	fi
	1332	fi
	1333	else
	1334	(( maxcycle = maxcycle - 1 ))
	1335	if (( maxcycle > 0 ))
	1336	then
	1337	filename=${filename}.$maxcycle
	1338	fi
	1339	fi
	1340
	1341	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1342	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1343	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1344	pathout[$i]=$filename
	1345	if (( maxcycle > 0 ))
	1346	then
	1347	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1348	else
	1349	frelout[$i]=${fname}${endout[$i]}
	1350	fi
	1351
	1352	fi
	1353	done
	1354
	1355
[83]	1356	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
	1357	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1358	then
	1359	if [[ "$dvrp_inc" = "" ]]
	1360	then
	1361	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
	1362	printf "\n This is required for the dvrp_graphics package.\n"
	1363	locat=dvrp; exit
	1364	fi
	1365	if [[ "$dvrp_lib" = "" ]]
	1366	then
	1367	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
	1368	printf "\n This is required for the dvrp_graphics package.\n"
	1369	locat=dvrp; exit
	1370	fi
	1371	fi
	1372
	1373
[1]	1374	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1375	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1376	# UEBERSETZT ZU WERDEN)
	1377	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1378	then
	1379	printf "\n +++ neither main program nor executable defined"
	1380	locat=source; exit
	1381	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1382	then
	1383	printf "\n +++ main program as well as executable defined"
	1384	locat=source; exit
	1385	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1386	then
	1387	do_compile=false
	1388	fi
	1389
	1390
[191]	1391	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
	1392	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
	1393	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
[193]	1394	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
[191]	1395	then
	1396	rm -rf SOURCES_FOR_RUN_$fname
	1397	mkdir SOURCES_FOR_RUN_$fname
	1398	fi
	1399
	1400
[1]	1401	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1402	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1403	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1404	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1405	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1406	then
	1407
[5]	1408	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1409	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1410
	1411
	1412	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1413	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1414	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1415	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1416	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1417	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1418	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1419	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1420	# GESAMMELT
[5]	1421	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1422	then
	1423
	1424	source_list=""
	1425	cd $source_path
	1426
	1427
	1428	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1429	Names=$(ls -1 *.f90 2>&1)
	1430	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1431	Names=$(ls -1 *.F90 2>&1)
	1432	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1433	Names=$(ls -1 *.F 2>&1)
	1434	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1435	Names=$(ls -1 *.f 2>&1)
	1436	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1437	Names=$(ls -1 *.c 2>&1)
	1438	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1439
	1440
	1441	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1442	for dateiname in $Filenames
	1443	do
	1444	if [[ -w $dateiname ]]
	1445	then
	1446	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1447	then
	1448	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1449	source_list=$source_list"$dateiname "
	1450	fi
	1451	fi
	1452	done
	1453
	1454	cd - > /dev/null
	1455
	1456
[5]	1457	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1458	then
	1459
	1460	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1461	source_list=""
	1462	cd $source_path
	1463
	1464
	1465	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1466	if [[ ! -d .svn ]]
	1467	then
	1468	printf "\n\n +++ source directory"
	1469	printf "\n \"$source_path\" "
	1470	printf "\n is not under control of \"subversion\"."
	1471	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1472	fi
	1473
	1474
	1475	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1476	Filenames=""
[69]	1477	svn status > tmp_mrun
	1478	while read line
[5]	1479	do
	1480	firstc=`echo $line \| cut -c1`
	1481	if [[ $firstc = M \|\| $firstc = "?" ]]
	1482	then
	1483	Name=`echo "$line" \| cut -c8-`
	1484	extension=`echo $Name \| cut -d. -f2`
	1485	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1486	then
	1487	Filenames="$Filenames "$Name
	1488	fi
	1489	fi
[69]	1490	done < tmp_mrun
[5]	1491
	1492
	1493	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1494	for dateiname in $Filenames
	1495	do
	1496	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1497	source_list=$source_list"$dateiname "
	1498	done
	1499
	1500	cd - > /dev/null
	1501
	1502
[1]	1503	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1504	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1505	# VORHANDEN
[5]	1506	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1507	then
	1508
	1509	cd $source_path
	1510
	1511	for filename in $source_list
	1512	do
	1513
	1514	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1515	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1516	then
	1517	printf "\n +++ source code file: $filename"
	1518	printf "\n must not contain (\"/\") "
	1519	locat=source; exit
	1520	fi
	1521
	1522	if [[ ! -f $filename ]]
	1523	then
	1524	printf "\n +++ source code file: $filename"
	1525	printf "\n does not exist"
	1526	locat=source; exit
	1527	else
	1528	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1529	fi
	1530
	1531	done
	1532
	1533	cd - > /dev/null
	1534
	1535	fi
	1536
	1537
	1538	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1539	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1540	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1541	if [[ $restart_run != true ]]
[1]	1542	then
	1543
	1544	if [[ ! -f "$source_path/$mainprog" ]]
	1545	then
	1546	printf "\n\n +++ main program: $mainprog"
	1547	printf "\n does not exist in source directory"
	1548	printf "\n \"$source_path\"\n"
	1549	locat=source; exit
	1550	else
	1551	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1552	then
	1553	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1554	source_list=${mainprog}" $source_list"
	1555	fi
	1556	fi
	1557	fi
	1558
	1559
	1560	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1561	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1562	then
	1563
	1564	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1565	if [[ ! -d $add_source_path ]]
	1566	then
	1567	printf "\n\n +++ WARNING: additional source code directory"
	1568	printf "\n \"$add_source_path\" "
	1569	printf "\n does not exist or is not a directory."
	1570	printf "\n No source code will be used from this directory!\n"
	1571	add_source_path=""
	1572	sleep 3
	1573	else
	1574
	1575	cd $add_source_path
	1576
	1577	Names=$(ls -1 *.f90 2>&1)
	1578	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1579	Names=$(ls -1 *.F90 2>&1)
	1580	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1581	Names=$(ls -1 *.F 2>&1)
	1582	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1583	Names=$(ls -1 *.f 2>&1)
	1584	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1585	Names=$(ls -1 *.c 2>&1)
	1586	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1587
	1588	cd - > /dev/null
	1589	cd SOURCES_FOR_RUN_$fname
	1590
	1591	for dateiname in $AddFilenames
	1592	do
	1593	if [[ -f $dateiname ]]
	1594	then
	1595	printf "\n +++ source code file \"$dateiname\" found in additional"
	1596	printf "\n source code directory \"$add_source_path\" "
	1597	printf "\n as well as in directory \"$source_path\"."
	1598	locat=source; exit
	1599	fi
	1600
	1601	cp $add_source_path/$dateiname .
	1602	source_list="$source_list $dateiname"
	1603
	1604	# Default User-Interface von der Liste entfernen, falls Datei
	1605	# ein User-Interface enthaelt
	1606	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1607	then
[50]	1608	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
[1]	1609	then
	1610	rm -rf user_interface.f90
	1611	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
[50]	1612	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
[1]	1613	printf "\n since a user-interface is found in file"
	1614	printf "\n \"$add_source_path/$dateiname\" \n"
	1615	sleep 3
	1616	else
	1617	printf "\n\n *** user-interface file \"$dateiname\" "
	1618	printf "\n added to the files to be translated \n"
	1619	sleep 3
	1620	fi
	1621	fi
	1622	done
	1623
	1624	cd - > /dev/null
	1625	fi
	1626	fi
	1627
	1628
	1629	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1630	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1631	if [[ $restart_run != true && -n $package_list ]]
[1]	1632	then
	1633
	1634	cd $source_path
	1635
	1636	for package in $package_list
	1637	do
	1638
	1639	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1640
	1641	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1642	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1643	# LIEFERT
	1644	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1645
	1646
	1647	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1648	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1649	for source_list_name in $package_source_list
	1650	do
	1651	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1652	then
	1653
	1654	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1655	ending=`echo $source_list_name \| cut -f2 -d.`
	1656	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1657	then
	1658	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1659	source_list="$source_list $source_list_name"
	1660	fi
	1661	fi
	1662	done
	1663	done
	1664
	1665	cd - > /dev/null
	1666	fi
	1667
	1668
	1669	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1670	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[82]	1671	if [[ "$restart_run" != true ]]
[1]	1672	then
	1673	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1674	if [[ ! -f $makefile ]]
	1675	then
	1676	printf "\n +++ file \"$makefile\" does not exist"
	1677	locat=make; exit
	1678	else
	1679	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1680	fi
	1681	fi
	1682
	1683	fi # do_compile=true
	1684
	1685
	1686	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1687	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1688	if [[ $do_compile = true ]]
	1689	then
	1690
	1691	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1692	# ZUSAMMENSETZEN
[83]	1693	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1694	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1695	then
[82]	1696	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1697	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1698	then
[82]	1699	cpp_options="$cpp_options -D__nec"
	1700	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1701	then
	1702	cpp_options="$cpp_options -D__lc"
[1]	1703	else
[82]	1704	cpp_options="$cpp_options -D__$localhost"
[1]	1705	fi
[83]	1706
	1707	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1708	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1709	then
[82]	1710	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1711	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1712	else
[82]	1713	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1714	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1715	fi
[83]	1716
	1717	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1718	if [[ -n $package_list ]]
	1719	then
	1720	for package in $package_list
	1721	do
	1722	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1723	then
	1724	if [[ $package != "dvrp_graphics+1PE" ]]
	1725	then
[82]	1726	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1727	else
[82]	1728	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1729	export use_seperate_pe_for_dvrp_output=true
	1730	fi
	1731	else
	1732	if [[ $package != "dvrp_graphics+1PE" ]]
	1733	then
[82]	1734	cpp_options="$cpp_options -D__$package"
[1]	1735	else
[82]	1736	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1737	export use_seperate_pe_for_dvrp_output=true
	1738	fi
	1739	fi
	1740	done
	1741	fi
[83]	1742
	1743	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1744	if [[ -n $cpp_opts ]]
	1745	then
	1746	for popts in $cpp_opts
	1747	do
[82]	1748	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1749	then
	1750	cpp_options="${cpp_options},-D__$popts=__$popts"
	1751	else
	1752	cpp_options="$cpp_options -D__$popts"
	1753	fi
[1]	1754	done
	1755	fi
	1756
	1757	else
	1758
	1759
	1760	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1761	if [[ $do_remote = false ]]
	1762	then
	1763	if [[ ! -f $executable ]]
	1764	then
	1765	printf "\n +++ executable file: $executable"
	1766	printf "\n does not exist"
	1767	locat=executable; exit
	1768	fi
	1769	fi
	1770	fi
	1771
	1772
	1773	# JOBMODUS FESTSTELLEN
	1774	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1775	then
	1776	jobmo=BATCH
	1777	else
	1778	jobmo=INTERACTIVE
	1779	fi
	1780
	1781
	1782	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1783	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1784	if [[ "$compiler_name" = "" ]]
	1785	then
[82]	1786
	1787	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
	1788	locat=compiler_name; exit
	1789
[1]	1790	fi
	1791
	1792
	1793	# COMPILER AUF NECK UEBERSCHREIBEN
	1794	[[ $localhost = neck ]] && compiler_name=mpif90
	1795
	1796
	1797
	1798	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1799	kennung=$RANDOM
	1800	if [[ "$tmp_user_catalog" = "" ]]
	1801	then
	1802	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1803	then
	1804	tmp_user_catalog=$TMPDIR
	1805	elif [[ $localhost = nech ]]
	1806	then
	1807	tmp_user_catalog=$WRKSHR
	1808	else
	1809	tmp_user_catalog=/tmp
	1810	fi
	1811	fi
	1812	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1813
	1814
	1815	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1816	# BESTIMMEN
	1817	if [[ "$tmp_data_catalog" = "" ]]
	1818	then
	1819	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1820	then
	1821	tmp_data_catalog=$WORK/mrun_restart_data
	1822	elif [[ $localhost = nech ]]
	1823	then
	1824	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1825	else
	1826	tmp_data_catalog=/tmp/mrun_restart_data
	1827	fi
	1828	fi
	1829
	1830
	1831	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1832	# ERSETZEN
	1833	if [[ $do_remote = false && $do_compile = true ]]
	1834	then
	1835	eval fopts=\"$fopts\"
	1836	eval lopts=\"$lopts\"
	1837	fi
	1838
	1839
	1840
	1841	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[82]	1842	fopts="$fopts $netcdf_inc $dvrp_inc"
	1843	lopts="$lopts $netcdf_lib $dvrp_lib"
[1]	1844	ROPTS="$ropts"
[179]	1845	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
[1]	1846	then
	1847	XOPT="-X $numprocs"
	1848	fi
	1849
	1850
	1851
	1852	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1853	# GRAMM BENOETIGT
	1854	done=false
	1855	while [[ $done = false ]]
	1856	do
	1857	cputime=$cpumax
	1858	if (( $cputime == 0 ))
	1859	then
	1860	printf "\n +++ cpu-time is undefined"
	1861	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1862	printf "\n >>> "
	1863	read cputime 1>/dev/null 2>&1
	1864	else
	1865	done=true
	1866	fi
	1867	cpumax=$cputime
	1868	done
	1869
	1870	(( minuten = cputime / 60 ))
	1871	(( sekunden = cputime - minuten * 60 ))
	1872
	1873
	1874	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	1875	if [[ $do_batch = true ]]
	1876	then
	1877	done=false
	1878	while [[ $done = false ]]
	1879	do
	1880	if (( memory == 0 ))
	1881	then
	1882	printf "\n +++ memory demand is undefined"
	1883	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	1884	printf "\n >>> "
	1885	read memory 1>/dev/null 2>&1
	1886	else
	1887	done=true
	1888	fi
	1889	done
	1890	fi
	1891
	1892
	1893	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	1894	if [[ $do_remote = true && -z $remote_username ]]
	1895	then
	1896	while [[ -z $remote_username ]]
	1897	do
	1898	printf "\n +++ username on remote host \"$host\" is undefined"
	1899	printf "\n >>> Please type username:"
	1900	printf "\n >>> "
	1901	read remote_username
	1902	done
	1903	mc="$mc -u$remote_username"
	1904	fi
	1905
	1906	###########################################################################
	1907	# HEADER-AUSGABE
	1908	###########################################################################
	1909
	1910
	1911	calltime=$(date)
	1912	printf "\n"
	1913	# [[ $silent = false ]] && clear
	1914	printf "#--------------------------------------------------------------# \n"
	1915	printf "\| $version$calltime \| \n"
	1916	printf "\| \| \n"
	1917	spalte1="called on:"; spalte2=$localhost_realname
	1918	printf "\| $spalte1$spalte2 \| \n"
	1919	if [[ $local_compile = false ]]
	1920	then
	1921	if [[ $do_remote = true ]]
	1922	then
	1923	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	1924	else
	1925	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	1926	fi
	1927	else
	1928	spalte1="compiling test only!"; spalte2=""
	1929	fi
	1930	printf "\| $spalte1$spalte2 \| \n"
	1931	if [[ -n $numprocs ]]
	1932	then
	1933	spalte1="number of PEs:"; spalte2=$numprocs
	1934	printf "\| $spalte1$spalte2 \| \n"
	1935	fi
	1936	if [[ -n $tasks_per_node ]]
	1937	then
	1938	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	1939	printf "\| $spalte1$spalte2 \| \n"
	1940	fi
	1941	if [[ $threads_per_task != 1 ]]
	1942	then
	1943	spalte1="threads per task:"; spalte2="$threads_per_task"
	1944	printf "\| $spalte1$spalte2 \| \n"
	1945	fi
	1946	printf "\| \| \n"
	1947	if [[ $do_compile = true ]]
	1948	then
[82]	1949	spalte1=cpp-directives:; spalte2=$cpp_options
[1]	1950	printf "\| $spalte1$spalte2 \| \n"
[82]	1951	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	1952	while [[ "$zeile" != "" ]]
	1953	do
	1954	spalte1=""
	1955	spalte2=$zeile
	1956	printf "\| $spalte1$spalte2 \| \n"
	1957	zeile=$(echo "$zeile" \| cut -c41-)
	1958	done
	1959
[82]	1960	spalte1=compiler-options:; spalte2="$fopts"
[1]	1961	printf "\| $spalte1$spalte2 \| \n"
[82]	1962	zeile=$(echo "$fopts" \| cut -c41-)
[1]	1963	while [[ "$zeile" != "" ]]
	1964	do
	1965	spalte1=""
	1966	spalte2=$zeile
	1967	printf "\| $spalte1$spalte2 \| \n"
	1968	zeile=$(echo "$zeile" \| cut -c41-)
	1969	done
	1970
[82]	1971	spalte1=linker-options:; spalte2=$lopts
[1]	1972	printf "\| $spalte1$spalte2 \| \n"
[82]	1973	zeile=$(echo "$lopts" \| cut -c41-)
[1]	1974	while [[ "$zeile" != "" ]]
	1975	do
	1976	spalte1=""
	1977	spalte2=$zeile
	1978	printf "\| $spalte1$spalte2 \| \n"
	1979	zeile=$(echo "$zeile" \| cut -c41-)
	1980	done
	1981
	1982	spalte1="main program":; spalte2=$mainprog
	1983	printf "\| $spalte1$spalte2 \| \n"
	1984	else
	1985	spalte1=executable:; spalte2=$executable
	1986	printf "\| $spalte1$spalte2 \| \n"
	1987	fi
	1988	printf "\| \| \n"
	1989	spalte1="base name of files":; spalte2=$fname
	1990	printf "\| $spalte1$spalte2 \| \n"
	1991	if [[ $fname != $afname ]]
	1992	then
	1993	spalte1="base name of input files":; spalte2=$afname
	1994	printf "\| $spalte1$spalte2 \| \n"
	1995	fi
	1996	spalte1="INPUT control list":; spalte2=$input_list
	1997	printf "\| $spalte1$spalte2 \| \n"
	1998	spalte1="OUTPUT control list":; spalte2=$output_list
	1999	printf "\| $spalte1$spalte2 \| \n"
	2000
	2001	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	2002	then
	2003	spalte1="memory demand / PE":; spalte2="$memory MB"
	2004	printf "\| $spalte1$spalte2 \| \n"
	2005	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	2006	printf "\| $spalte1$spalte2 \| \n"
	2007	fi
	2008
	2009	if [[ $do_compile = true ]]
	2010	then
	2011	printf "\| \| \n"
	2012	printf "\| Files to be compiled: \| \n"
	2013	zeile=$source_list
	2014	while [[ "$zeile" != "" ]]
	2015	do
	2016	spalte3=$zeile
	2017	printf "\| $spalte3 \| \n"
	2018	zeile=$(echo "$zeile" \| cut -c61-)
	2019	done
	2020	fi
	2021	printf "#--------------------------------------------------------------#"
	2022
	2023
	2024
	2025	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2026	if [[ $do_trace = true ]]
	2027	then
	2028	(( i = 0 ))
	2029	while (( i < iin ))
	2030	do
	2031	(( i = i + 1 ))
	2032	if (( i == 1 ))
	2033	then
	2034	printf "\n\n >>> INPUT-file assignments:\n"
	2035	fi
	2036	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2037	done
	2038	(( i = 0 ))
	2039	while (( i < iout ))
	2040	do
	2041	(( i = i + 1 ))
	2042	if (( i == 1 ))
	2043	then
	2044	printf "\n\n >>> OUTPUT-file assignments:\n"
	2045	fi
	2046	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2047	done
	2048	(( i = 0 ))
	2049	while (( i < iic ))
	2050	do
	2051	(( i = i + 1 ))
	2052	if (( i == 1 ))
	2053	then
	2054	printf "\n\n >>> INPUT-commands:\n"
	2055	fi
	2056	printf "\n ${in_command[$i]}"
	2057	done
	2058	(( i = 0 ))
	2059	while (( i < ioc ))
	2060	do
	2061	(( i = i + 1 ))
	2062	if (( i == 1 ))
	2063	then
	2064	printf "\n\n >>> OUTPUT-commands:\n"
	2065	fi
	2066	printf "\n ${out_command[$i]}"
	2067	done
	2068	fi
	2069
	2070
	2071	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2072	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2073	then
	2074	antwort=dummy
	2075	printf "\n\n"
	2076	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2077	do
	2078	printf " >>> everything o.k. (y/n) ? "
	2079	read antwort
	2080	done
	2081	if [[ $antwort = n \|\| $antwort = N ]]
	2082	then
	2083	locat=user_abort; (( iec = 0 )); exit
	2084	fi
	2085	if [[ $do_batch = true ]]
	2086	then
	2087	printf " >>> batch-job will be created and submitted"
	2088	else
	2089	if [[ $local_compile = false ]]
	2090	then
	2091	printf " >>> MRUN will now continue to execute on this machine"
	2092	else
	2093	printf " >>> a test compilation will now be carried out on this machine"
	2094	fi
	2095	fi
	2096	fi
	2097
	2098
	2099
	2100
	2101	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2102	# CHENDE AKTIONEN DURCHGEFUEHRT
	2103	if [[ $do_batch = false ]]
	2104	then
	2105
	2106
	2107	# TEMPORAEREN KATALOG ERZEUGEN
	2108	mkdir -p $TEMPDIR
	2109	chmod go+rx $TEMPDIR
	2110	tmpcreate=true
	2111
	2112
	2113	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2114	# TEMPORAERES VERZEICHNIS KOPIEREN
	2115	if [[ $do_compile = true ]]
	2116	then
	2117
	2118	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2119	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2120	if [[ $localhost = nech ]]
	2121	then
	2122	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2123	if mkdir -p $TEMPDIR_COMPILE
	2124	then
	2125	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2126	printf "\n is generated as temporary directory for cross compiling\n"
	2127	else
	2128	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2129	printf "\n needed for cross compilation failed"
	2130	locat=compile
	2131	exit
	2132	fi
	2133	else
	2134	TEMPDIR_COMPILE=$TEMPDIR
	2135	fi
	2136
	2137
[82]	2138	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2139	line=""
	2140	grep "%depository_path" $config_file > tmp_mrun
	2141	while read line
	2142	do
	2143	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2144	then
	2145	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2146	then
[82]	2147	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2148	fi
[82]	2149	fi
	2150	done < tmp_mrun
[1]	2151
[82]	2152	line=""
	2153	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2154	while read line
	2155	do
	2156	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2157	then
[82]	2158	local_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2159	fi
[82]	2160	done < tmp_mrun
[1]	2161
[82]	2162	if [[ "$local_depository_path" = "" ]]
	2163	then
	2164	if [[ "$global_depository_path" != "" ]]
[1]	2165	then
[82]	2166	local_depository_path=$global_depository_path
[1]	2167	else
[82]	2168	printf "\n\n +++ no depository path found in configuration file"
	2169	printf "\n for local host \"$localhost\" "
	2170	printf "\n please set \"\%depository_path\" in configuration file\n"
	2171	locat=config_file; exit
[1]	2172	fi
[82]	2173	fi
	2174	eval local_depository_path=$local_depository_path
[1]	2175
[82]	2176	basename=`print $mainprog \| cut -f1 -d"."`
	2177	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2178	if [[ ! -f $make_depository ]]
	2179	then
	2180	printf "\n"
	2181	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2182	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2183	else
	2184	cp $make_depository $TEMPDIR_COMPILE
[1]	2185	cd $TEMPDIR_COMPILE
[82]	2186	tar -xf $make_depository > /dev/null 2>&1
[1]	2187	cd - > /dev/null
	2188	fi
[82]	2189
	2190	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2191
	2192	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2193	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2194	# MAKEFILE EINTRAGEN
	2195	cd $TEMPDIR_COMPILE
	2196	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2197	if [[ "$interface_file" != "" ]]
	2198	then
	2199	interface_file=`echo $interface_file \| cut -d"." -f1`
	2200	mv Makefile Makefile_old
	2201	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2202	fi
	2203	cd - > /dev/null
[1]	2204	else
	2205	cp $executable ${TEMPDIR}/a.out
	2206	fi
	2207
	2208
	2209	# WECHSEL IN TEMPORAEREN KATALOG
	2210	cd $TEMPDIR
	2211	printf "\n *** changed to temporary directory: $TEMPDIR"
	2212
	2213
	2214	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2215	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2216	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2217	# ERMITTELN
	2218	(( i = 0 ))
	2219	while (( i < iout ))
	2220	do
	2221	(( i = i + 1 ))
	2222	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2223	then
	2224	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2225	else
	2226	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2227	fi
	2228	done
	2229
	2230
	2231	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2232	if [[ $do_compile = true ]]
	2233	then
	2234
	2235
	2236	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2237	printf "\n\n\n *** compilation starts \n$striche\n"
	2238	printf " *** compilation with make using following options:\n"
	2239	printf " compilername: $compiler_name\n"
	2240	printf " options: $fopts\n"
	2241	printf " preprocessor-directives: $cpp_options \n"
	2242	printf " linker-options: $lopts \n"
	2243	printf " source code files: $source_list \n"
	2244
	2245	if [[ $localhost = nech ]]
[1]	2246	then
[82]	2247	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2248	cp $TEMPDIR_COMPILE/a.out .
	2249	[[ $? != 0 ]] && compile_error=true
	2250	rm -rf $TEMPDIR_COMPILE
[1]	2251	else
[118]	2252	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
[82]	2253	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
	2254	fi
[1]	2255
	2256	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2257	then
	2258	printf "\n +++ error occured while compiling or linking"
	2259	locat=compile
[181]	2260
[182]	2261	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
[181]	2262	if [[ $localhost != lcsgib && $localhost != lcsgih ]]
	2263	then
	2264	exit
[182]	2265	else
	2266	locat=normal
[181]	2267	fi
[1]	2268	else
	2269	printf "$striche\n *** compilation finished \n"
	2270	fi
	2271	fi
	2272
	2273
	2274	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2275	if [[ $local_compile = true ]]
	2276	then
	2277	cd $HOME
	2278	rm -rf $TEMPDIR
	2279	locat=local_compile; exit
	2280	fi
	2281
	2282
	2283	# BEREITSTELLEN DER INPUT-DATEIEN
	2284	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2285	(( i = 0 ))
	2286	while (( i < iin ))
	2287	do
	2288	(( i = i + 1 ))
	2289	if (( i == 1 ))
	2290	then
	2291	printf "\n\n *** providing INPUT-files:\n$striche"
	2292	fi
	2293
	2294
	2295	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2296	if [[ "${transin[$i]}" = unavailable ]]
	2297	then
	2298	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2299	then
	2300	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2301	printf "\n is not available!"
	2302	else
	2303	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2304	printf "\n is not available!"
	2305	fi
	2306	continue
	2307	fi
	2308
	2309	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2310	files_for_pes=false; datentyp=file
	2311	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2312	then
	2313	files_for_pes=true; datentyp=directory
	2314	actionin[$i]=""
	2315	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2316	then
	2317	actionin[$i]=""
	2318	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2319	then
	2320	files_for_pes=true; datentyp=directory
	2321	actionin[$i]="ar"
	2322	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2323	then
	2324	actionin[$i]="ar"
	2325	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2326	then
	2327	files_for_pes=true; datentyp=directory
	2328	actionin[$i]="fl"
	2329	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2330	then
	2331	actionin[$i]="fl"
	2332	fi
	2333
	2334	if [[ $files_for_pes = true ]]
	2335	then
	2336	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2337	else
	2338	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2339	fi
	2340
	2341	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2342	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2343	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2344	# SERVER ZU HOLEN
	2345	if [[ "${actionin[$i]}" = fl ]]
	2346	then
	2347	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2348	if [[ $files_for_pes = false ]]
	2349	then
	2350	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2351	then
	2352	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2353	got_tmp[$i]=true
	2354	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2355	then
	2356	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2357	printf "\n *** trying to use backup copy in \"$WORK\" "
	2358	cp $WORK/${frelin[$i]} ${localin[$i]}
	2359	else
	2360	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2361	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2362	printf "\n *** trying to get copy from archive"
	2363	actionin[$i]=ar
	2364	fi
	2365	else
	2366	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2367	then
	2368	mkdir ${localin[$i]}
[149]	2369	cd $tmp_data_catalog/${frelin[$i]}
	2370	for file in $(ls *)
	2371	do
	2372	ln $file $TEMPDIR/${localin[$i]}
	2373	done
	2374	cd $TEMPDIR
[1]	2375	got_tmp[$i]=true
	2376	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2377	then
	2378	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2379	printf "\n *** trying to use backup copy in \"$WORK\" "
	2380	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2381	else
	2382	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2383	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2384	printf "\n *** trying to get copy from archive"
	2385	actionin[$i]=ar
	2386	fi
	2387	fi
	2388	fi
	2389
	2390
	2391	# DATEI LIEGT AUF ARCHIV-SERVER
	2392	if [[ "${actionin[$i]}" = ar ]]
	2393	then
	2394
	2395	if [[ $files_for_pes = false ]]
	2396	then
	2397	printf "\n file will be restored from archive-system ($archive_system)!"
	2398	else
	2399	printf "\n directory will be restored from archive-system ($archive_system)!"
	2400	fi
	2401
	2402	file_restored=false
	2403
	2404	if [[ $archive_system = asterix ]]
	2405	then
	2406	do_stagein=true
	2407	(( stagein_anz = 0 ))
	2408	while [[ $do_stagein = true ]]
	2409	do
	2410	if [[ $files_for_pes = false ]]
	2411	then
	2412	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2413	else
	2414	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2415	fi
	2416	cat STAGEIN_OUTPUT
	2417	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2418	then
	2419	file_restored=true
	2420	do_stagein=false
	2421	else
	2422	(( stagein_anz = stagein_anz + 1 ))
	2423	if (( stagein_anz == 10 ))
	2424	then
	2425	printf "\n +++ stagein stoped after 10 tries"
	2426	locat=stage
	2427	exit
	2428	fi
	2429	printf "\n +++ restoring from archive failed, trying again:"
	2430	sleep 900
	2431	fi
	2432	done
	2433	elif [[ $archive_system = DMF ]]
	2434	then
	2435	if [[ $files_for_pes = false ]]
	2436	then
	2437	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2438	locat=DMF
	2439	exit
	2440	else
	2441	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2442	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2443	file_restored=true
	2444	fi
	2445	elif [[ $archive_system = tivoli ]]
	2446	then
	2447	if [[ $files_for_pes = false ]]
	2448	then
	2449	if [[ $localhost = ibmh ]]
	2450	then
	2451	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2452	else
	2453	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2454	fi
	2455	else
	2456	(( inode = 0 ))
	2457	while (( inode < nodes ))
	2458	do
	2459	if [[ $localhost = ibmh ]]
	2460	then
	2461	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2462	else
	2463	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2464	fi
	2465	(( inode = inode + 1 ))
	2466	done
	2467	fi
	2468	file_restored=true
	2469	elif [[ $archive_system = ut ]]
	2470	then
	2471	if [[ $files_for_pes = false ]]
	2472	then
	2473	cp $UT/${frelin[$i]} .
	2474	else
	2475	(( inode = 0 ))
	2476	while (( inode < nodes ))
	2477	do
	2478	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2479	(( inode = inode + 1 ))
	2480	done
	2481	fi
	2482	file_restored=true
	2483	else
	2484	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2485	locat=rearchive
	2486	exit
	2487	fi
	2488
	2489	if [[ $file_restored = true ]]
	2490	then
	2491
	2492	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2493	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2494	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2495	if [[ $files_for_pes = false ]]
	2496	then
	2497	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2498	else
	2499	mkdir $tmp_data_catalog/${frelin[$i]}
	2500	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2501	fi
	2502	got_tmp[$i]=true
	2503
	2504	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2505	mv ${frelin[$i]} ${localin[$i]}
	2506
	2507	fi
	2508	fi
	2509
	2510
	2511	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2512	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2513	then
	2514
	2515	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2516	then
	2517
	2518	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2519	printf "\n file will be provided for $numprocs processors"
	2520	mkdir ${localin[$i]}
	2521	ival=$numprocs
	2522	(( ii = 0 ))
	2523	while (( ii <= ival-1 ))
	2524	do
	2525	if (( ii < 10 ))
	2526	then
	2527	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2528	elif (( ii < 100 ))
	2529	then
	2530	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2531	elif (( ii < 1000 ))
	2532	then
	2533	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2534	else
	2535	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2536	fi
	2537	(( ii = ii + 1 ))
	2538	done
	2539
	2540	else
	2541
	2542	if [[ $files_for_pes = true ]]
	2543	then
	2544
	2545	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2546	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2547	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2548	# PER MOVE UMBENANNT WERDEN
	2549	printf "\n providing $numprocs files for the respective processors"
	2550	mkdir ${localin[$i]}
[183]	2551	if [[ $link_local_input = true ]]
	2552	then
	2553	printf " using ln -f\n"
	2554	cd ${absnamein[$i]}
	2555	for file in $(ls *)
	2556	do
	2557	ln -f $file ${localin[$i]}
	2558	done
	2559	cd $TEMPDIR
	2560	fi
	2561	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
	2562	if [[ ! -f "${localin[$i]}/_0000" ]]
	2563	then
	2564	if [[ $link_local_input = true ]]
	2565	then
	2566	printf " ln failed for .../_0000, using cp...\n"
	2567	fi
	2568	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2569	fi
[1]	2570
	2571	else
	2572	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
[183]	2573	if [[ $link_local_input = true ]]
	2574	then
	2575	printf " using ln -f\n"
	2576	ln -f ${absnamein[$i]} ${localin[$i]}
	2577	fi
	2578	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
	2579	if [[ ! -f "${localin[$i]}" ]]
	2580	then
	2581	if [[ $link_local_input = true ]]
	2582	then
	2583	printf " ln failed, using cp...\n"
	2584	fi
	2585	cp ${absnamein[$i]} ${localin[$i]}
	2586	fi
[1]	2587	fi
	2588	fi
	2589	fi
	2590
	2591	done
	2592	if (( i != 0 ))
	2593	then
	2594	printf "\n$striche\n *** all INPUT-files provided \n"
	2595	fi
	2596
	2597
	2598	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2599	# LESEN VON PALM)
	2600	cat > ENVPAR << %%END%%
	2601	&envpar run_identifier = '$fname', host = '$localhost',
	2602	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
[75]	2603	maximum_cpu_time_allowed = ${cpumax}.,
	2604	revision = '$global_revision' /
[1]	2605
	2606	%%END%%
	2607
	2608
	2609	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2610	(( i = 0 ))
	2611	while (( i < iic ))
	2612	do
	2613	(( i = i + 1 ))
	2614	if (( i == 1 ))
	2615	then
	2616	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2617	fi
	2618	printf "\n >>> ${in_command[$i]}"
	2619	eval ${in_command[$i]}
	2620	if (( i == iic ))
	2621	then
	2622	printf "\n$striche\n"
	2623	fi
	2624	done
	2625
	2626
	2627	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2628	cpurest=${cpumax}.
	2629
	2630
	2631	# PROGRAMMSTART
	2632	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2633	PATH=$PATH:$TEMPDIR
	2634
	2635	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2636	then
	2637	if [[ "$ENVIRONMENT" = BATCH ]]
	2638	then
	2639	printf "\n +++ debug is allowed in interactive mode only"
	2640	locat=debug
	2641	exit
	2642	fi
[5]	2643	if [[ $localhost = decalpha ]]
[1]	2644	then
	2645	dxladebug a.out
	2646	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2647	then
	2648
	2649	# SETUP THE IBM MPI ENVIRONMENT
	2650	export MP_SHARED_MEMORY=yes
	2651	export AIXTHREADS_SCOPE=S
	2652	export OMP_NUM_THREADS=$threads_per_task
	2653	export AUTHSTATE=files
	2654	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2655
	2656	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2657	export MP_ADAPTER_USE=shared
	2658	export MP_CPU_USE=multiple
	2659	export MP_TIMEOUT=1200
	2660
	2661	unset MP_TASK_AFFINITY
	2662
	2663	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2664	#(( ii = 1 ))
	2665	#while (( ii <= $numprocs ))
	2666	#do
	2667	# echo $localhost_realname >> hostfile
	2668	# (( ii = ii + 1 ))
	2669	#done
	2670	#export MP_HOSTFILE=hostfile
	2671
	2672	if [[ "$LOADLBATCH" = yes ]]
	2673	then
	2674	totalview poe a.out $ROPTS
	2675	else
	2676	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2677	export TVDSVRLAUNCHCMD=ssh
	2678	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2679	fi
	2680	else
	2681	printf "\n +++ no debug available on \"$localhost\" "
	2682	printf "\n or not implemented in mrun so far"
	2683	locat=debug
	2684	exit
	2685	fi
	2686	else
	2687	if [[ -n $numprocs ]]
	2688	then
	2689
	2690	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2691	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2692	then
	2693	# SETUP THE IBM MPI ENVIRONMENT
	2694	export MP_SHARED_MEMORY=yes
	2695	export AIXTHREAD_SCOPE=S
	2696	export OMP_NUM_THREADS=$threads_per_task
	2697	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2698	export AUTHSTATE=files
	2699	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2700	# export MP_PRINTENV=yes
	2701
	2702	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2703	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2704	export MP_WAIT_MODE=poll
	2705	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2706	# export MP_EAGER_LIMIT=65535
	2707
	2708	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2709	# export MPJ_MTAB=128
	2710	# export MPJ_ALLTOALL=1
	2711	# export MPJ_ALLTOALLV=1
	2712
	2713	if [[ "$LOADLBATCH" = yes ]]
	2714	then
	2715	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2716	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2717	then
[102]	2718	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
[1]	2719	else
[102]	2720	poe ./a.out $ROPTS
[1]	2721	fi
	2722	else
	2723	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2724	then
[102]	2725	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
[1]	2726	elif [[ $localhost = ibmy ]]
	2727	then
	2728	if [[ -f $hostfile ]]
	2729	then
	2730	cp $hostfile hostfile
	2731	else
	2732	(( ii = 1 ))
	2733	while (( ii <= $numprocs ))
	2734	do
	2735	echo $localhost_realname >> hostfile
	2736	(( ii = ii + 1 ))
	2737	done
	2738	fi
	2739	export MP_HOSTFILE=hostfile
[102]	2740	./a.out -procs $tasks_per_node $ROPTS
[1]	2741	else
	2742	if [[ "$host_file" = "" ]]
	2743	then
	2744	printf "\n +++ no hostfile given in configuration file"
	2745	locat=config_file
	2746	exit
	2747	else
	2748	eval host_file=$host_file
	2749	fi
	2750	export MP_HOSTFILE=$host_file
[102]	2751	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
[1]	2752	fi
	2753	fi
	2754	elif [[ $host = nech \|\| $host = neck ]]
	2755	then
	2756	(( ii = nodes ))
	2757	if [[ $ii = 1 ]]
	2758	then
	2759	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	2760	export MPIPROGINF=YES
[61]	2761	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	2762	echo "*** execution on single node with mpirun"
[102]	2763	mpirun -np $numprocs ./a.out $ROPTS
[1]	2764	else
	2765	(( i = 0 ))
	2766	while (( i < ii ))
	2767	do
	2768	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	2769	(( i = i + 1 ))
	2770	done
	2771
	2772	echo "#!/bin/sh" > mpi_exec_shell
	2773	echo " " >> mpi_exec_shell
	2774	echo "set -u" >> mpi_exec_shell
	2775	echo "F_ERRCNT=0" >> mpi_exec_shell
	2776	echo "MPIPROGINV=YES" >> mpi_exec_shell
	2777	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	2778	echo "cpurest=$cpurest" >> mpi_exec_shell
	2779	echo "fname=$fname" >> mpi_exec_shell
	2780	echo "localhost=$localhost" >> mpi_exec_shell
	2781	echo "return_addres=$return_addres" >> mpi_exec_shell
	2782	echo "return_username=$return_username" >> mpi_exec_shell
	2783	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	2784	echo "write_binary=$write_binary" >> mpi_exec_shell
	2785	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2786	echo " " >> mpi_exec_shell
	2787	echo "export F_ERRCNT" >> mpi_exec_shell
	2788	echo "export MPIPROGINV" >> mpi_exec_shell
	2789	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	2790	echo "export cpurest" >> mpi_exec_shell
	2791	echo "export fname" >> mpi_exec_shell
	2792	echo "export localhost" >> mpi_exec_shell
	2793	echo "export return_addres" >> mpi_exec_shell
	2794	echo "export return_username" >> mpi_exec_shell
	2795	echo "export tasks_per_node" >> mpi_exec_shell
	2796	echo "export write_binary" >> mpi_exec_shell
	2797	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2798	echo " " >> mpi_exec_shell
[102]	2799	echo "exec ./a.out" >> mpi_exec_shell
[1]	2800
	2801	chmod u+x mpi_exec_shell
	2802	export MPIPROGINF=YES
	2803	mpirun -f multinode_config &
	2804	wait
	2805
	2806	fi
[82]	2807	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
[1]	2808	then
	2809
	2810	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	2811	# DOES NOT EXIST
[179]	2812	if [[ $host != lcsgih && $host != lcsgib ]]
[1]	2813	then
[179]	2814	if [[ -f $hostfile ]]
	2815	then
	2816	cp $hostfile hostfile
	2817	else
	2818	(( ii = 1 ))
	2819	while (( ii <= $numprocs / $threads_per_task ))
	2820	do
	2821	echo $localhost_realname >> hostfile
	2822	(( ii = ii + 1 ))
	2823	done
	2824	fi
	2825	eval zeile=\"`head -n $ii hostfile`\"
	2826	printf "\n *** running on: $zeile"
[1]	2827	fi
[179]	2828
[1]	2829	(( ii = $numprocs / $threads_per_task ))
	2830	export OMP_NUM_THREADS=$threads_per_task
[179]	2831	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
[1]	2832	if [[ $threads_per_task != 1 ]]
	2833	then
	2834	printf "\n threads per task: $threads_per_task"
	2835	fi
[102]	2836	if [[ $run_coupled_model = false ]]
[1]	2837	then
[102]	2838	printf "\n\n"
[179]	2839	if [[ $host = lcsgih \|\| $host = lcsgib ]]
[164]	2840	then
[191]	2841	ulimit -s 30000 # A too large stack size causes problems
[182]	2842	export MV2_NUM_PORTS=2
[181]	2843	# export MV2_CPU_MAPPING=0:1:2:3
[182]	2844	mpiexec ./palm $ROPTS
[179]	2845	elif [[ $host = lcxt4 ]]
	2846	then
[164]	2847	aprun -n $ii -N $tasks_per_node a.out $ROPTS
	2848	else
[172]	2849	echo "no_coupling" > runfile_atmos
	2850	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
[164]	2851	fi
[1]	2852	else
[102]	2853	(( iii = ii / 2 ))
[164]	2854	echo "atmosphere_to_ocean" > runfile_atmos
	2855	echo "ocean_to_atmosphere" > runfile_ocean
	2856
[102]	2857	printf "\n coupled run ($iii atmosphere, $iii ocean)"
	2858	printf "\n\n"
[164]	2859
[188]	2860	if [[ $host = lcxt4 ]]
[164]	2861	then
	2862	aprun -n $iii -N $tasks_per_node a.out < runfile_atmos $ROPTS &
	2863	aprun -n $iii -N $tasks_per_node a.out < runfile_ocean $ROPTS &
	2864	else
	2865
	2866	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
	2867	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_atmos &
	2868	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_ocean &
	2869	# mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
	2870	# mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
	2871	fi
[102]	2872	wait
[1]	2873	fi
[102]	2874
	2875	# if [[ $scirocco = true ]]
	2876	# then
	2877	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
	2878	# else
	2879	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
	2880	# fi
	2881
[1]	2882	elif [[ $host = decalpha ]]
	2883	then
[102]	2884	dmpirun -np $numprocs a.out $ROPTS
[1]	2885	elif [[ $host = lctit ]]
	2886	then
	2887	export runfile=runfile.$kennung
	2888
	2889	echo "cd $PWD" > $runfile
	2890	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	2891	echo "export cpurest=$cpurest" >> $runfile
	2892	echo "export fname=$fname" >> $runfile
	2893	echo "export localhost=$localhost" >> $runfile
	2894	echo "export return_addres=$return_addres" >> $runfile
	2895	echo "export return_username=$return_username" >> $runfile
	2896	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	2897	echo "export write_binary=$write_binary" >> $runfile
	2898	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	2899	echo "./a.out" >> $runfile
	2900	chmod u+x $runfile
	2901
	2902	if [[ "$QUEUE" = interactive ]]
	2903	then
[102]	2904	mpirun -np $numprocs a.out $ROPTS
[1]	2905	else
[127]	2906	(( mem_tsubame = $memory / 1024.0 ))
	2907	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
[118]	2908	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
[126]	2909	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
[1]	2910	fi
	2911
	2912	rm $runfile
	2913	else
[102]	2914	mpprun -n $numprocs a.out $ROPTS
[1]	2915	fi
	2916	[[ $? != 0 ]] && execution_error=true
	2917
	2918
	2919	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	2920	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	2921	then
	2922	apprentice
	2923	fi
	2924	else
[102]	2925	a.out $ROPTS
[1]	2926	fi
	2927	fi
	2928	if [[ $? != 0 \|\| $execution_error = true ]]
	2929	then
	2930
	2931	# ABBRUCH BEI LAUFZEITFEHLER
[102]	2932	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	2933	printf "\n +++ runtime error occured"
	2934	locat=execution
	2935	exit
	2936	else
[102]	2937	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	2938	printf "\n$striche\n *** execution finished \n"
	2939	fi
	2940
	2941
	2942
	2943	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	2944	(( i = 0 ))
	2945	while (( i < ioc ))
	2946	do
	2947	(( i = i + 1 ))
	2948	if (( i == 1 ))
	2949	then
	2950	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	2951	fi
	2952	printf "\n >>> ${out_command[$i]}"
	2953	eval ${out_command[$i]}
	2954	if (( i == ioc ))
	2955	then
	2956	printf "\n$striche\n"
	2957	fi
	2958	done
	2959
	2960
	2961	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	2962	if [[ $do_trace = true ]]
	2963	then
	2964	printf "\n\n"
	2965	ls -al
	2966	fi
	2967
	2968
	2969
	2970	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	2971	(( i = 0 ))
	2972	while (( i < iout ))
	2973	do
	2974	(( i = i + 1 ))
	2975	if (( i == 1 ))
	2976	then
	2977	printf "\n\n *** saving OUTPUT-files:\n$striche"
	2978	fi
	2979
	2980	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2981	files_for_pes=false; filetyp=file
	2982	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	2983	then
	2984	files_for_pes=true; filetyp=directory
	2985	actionout[$i]=""
	2986	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	2987	then
	2988	actionout[$i]=""
	2989	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	2990	then
	2991	files_for_pes=true; filetyp=directory
	2992	actionout[$i]="ar"
	2993	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	2994	then
	2995	actionout[$i]="ar"
	2996	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	2997	then
	2998	files_for_pes=true; filetyp=directory
	2999	actionout[$i]="fl"
	3000	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	3001	then
	3002	actionout[$i]="fl"
	3003	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	3004	then
	3005	files_for_pes=true; filetyp=directory
	3006	actionout[$i]="tr"
	3007	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	3008	then
	3009	actionout[$i]="tr"
	3010	fi
	3011
	3012	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	3013	then
	3014	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
	3015	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
	3016	then
	3017	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	3018	else
	3019
	3020
	3021	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3022	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3023	# REMOTE-RECHNUNGEN
	3024	if [[ "${actionout[$i]}" = tr ]]
	3025	then
	3026	if [[ $localhost != $fromhost ]]
	3027	then
	3028	if [[ $files_for_pes = false ]]
	3029	then
	3030	cps=""
	3031	cst=""
	3032	else
	3033	cps=-c
	3034	cst="/"
	3035	fi
	3036	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3037	then
	3038
	3039	# TRANSFER IN EIGENSTAENDIGEM JOB
	3040	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3041	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3042	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3043	if [[ $files_for_pes = false ]]
	3044	then
	3045	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3046	else
	3047	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	3048	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	3049	fi
	3050
	3051	echo "set -x" > transfer_${localout[$i]}
	3052	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3053
	3054	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	3055	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	3056	printf "\n or higher cycle\n"
	3057	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3058
[1]	3059	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3060
	3061	if [[ $localhost = nech ]]
	3062	then
[82]	3063	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3064	else
	3065	if [[ "$LOGNAME" = b323013 ]]
	3066	then
[164]	3067	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3068	else
[164]	3069	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3070	fi
	3071	fi
	3072
	3073	else
	3074
	3075	# TRANSFER INNERHALB DIESES JOBS
	3076	transfer_failed=false
[82]	3077	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	3078	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	3079	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3080	[[ $? != 0 ]] && transfer_failed=true
[1]	3081
	3082	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3083	# LOKALER MASCHINE ANLEGEN
	3084	if [[ $transfer_failed = true ]]
	3085	then
	3086	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3087	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3088
	3089	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3090	# ANLEGEN.
	3091	eval local_catalog=${pathout[$i]}
	3092	if [[ ! -d $local_catalog ]]
	3093	then
	3094	printf " *** local directory does not exist. Trying to create:\n"
	3095	printf " $local_catalog \n"
	3096	mkdir -p $local_catalog
	3097	fi
	3098	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3099	transfer_problems=true
	3100	fi
	3101	fi
	3102	else
	3103
	3104	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3105	actionout[$i]=""
	3106	fi
	3107	fi
	3108
	3109
	3110	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3111	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3112	# REMOTE-RECHNUNGEN
	3113	if [[ "${actionout[$i]}" = tra ]]
	3114	then
	3115	if [[ $localhost != $fromhost ]]
	3116	then
	3117	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3118	then
	3119
	3120	# TRANSFER IN EIGENSTAENDIGEM JOB
	3121	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3122	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3123	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3124	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3125
	3126	echo "set -x" > transfer_${localout[$i]}
	3127	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3128
	3129	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3130	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3131	printf "\n or higher cycle\n"
	3132	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3133
[1]	3134	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3135
	3136	if [[ $localhost = nech ]]
	3137	then
[82]	3138	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3139	else
	3140	if [[ $LOGNAME = b323013 ]]
	3141	then
[164]	3142	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3143	else
[164]	3144	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3145	fi
	3146	fi
	3147
	3148	else
	3149
	3150	# TRANSFER INNERHALB DIESES JOBS
	3151	transfer_failed=false
[82]	3152	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3153	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3154	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3155	[[ $? != 0 ]] && transfer_failed=true
[1]	3156
	3157	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3158	# LOKALER MASCHINE ANLEGEN
	3159	if [[ $transfer_failed = true ]]
	3160	then
	3161	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3162	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3163
	3164	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3165	# ANLEGEN
	3166	eval local_catalog=${pathout[$i]}
	3167	if [[ ! -d $local_catalog ]]
	3168	then
	3169	printf " *** local directory does not exist. Trying to create:\n"
	3170	printf " $local_catalog \n"
	3171	mkdir -p $local_catalog
	3172	fi
	3173
	3174	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3175	transfer_problems=true
	3176	fi
	3177	fi
	3178	else
	3179
	3180	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3181	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3182	actionout[$i]=a
	3183	fi
	3184	fi
	3185
	3186
	3187	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3188	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3189	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3190	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3191	if [[ "${actionout[$i]}" = fl ]]
	3192	then
	3193	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3194	chmod g+rx $tmp_data_catalog
	3195	if [[ $files_for_pes = false ]]
	3196	then
	3197	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3198	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3199	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3200	else
	3201	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3202	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3203	mkdir $tmp_data_catalog/${frelout[$i]}
[149]	3204	cd ${localout[$i]}
	3205	for file in $(ls *)
	3206	do
	3207	ln -f $file $tmp_data_catalog/${frelout[$i]}
	3208	done
	3209	cd $TEMPDIR
[1]	3210	fi
	3211
	3212
	3213	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3214	if [[ $store_on_archive_system = true ]]
	3215	then
	3216
	3217	if [[ $archive_system = asterix ]]
	3218	then
	3219	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3220	if [[ $files_for_pes = false ]]
	3221	then
	3222	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3223	else
	3224	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3225	fi
	3226	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3227	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3228	echo "then" >> archive_${frelout[$i]}
	3229	echo " do_stageout=false" >> archive_${frelout[$i]}
	3230	echo "else" >> archive_${frelout[$i]}
	3231	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3232	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3233	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3234	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3235	if [[ $files_for_pes = false ]]
	3236	then
	3237	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3238	else
	3239	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3240	fi
	3241	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3242	echo "fi" >> archive_${frelout[$i]}
	3243	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3244	elif [[ $archive_system = DMF ]]
	3245	then
	3246	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3247	if [[ $files_for_pes = false ]]
	3248	then
	3249	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3250	locat=DMF
	3251	exit
	3252	else
	3253	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3254	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3255	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3256	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3257	fi
	3258	elif [[ $archive_system = tivoli ]]
	3259	then
	3260	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3261	if [[ $files_for_pes = false ]]
	3262	then
	3263	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3264	echo "set -x" >> archive_${frelout[$i]}
	3265	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3266	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3267	else
	3268
	3269	echo "set -x" >> archive_${frelout[$i]}
	3270	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3271	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3272	cd $tmp_data_catalog
	3273	all_files=`ls -1 ${frelout[$i]}/*`
	3274	cd - > /dev/null
	3275	(( inode = 0 ))
	3276	(( tp1 = tasks_per_node + 1 ))
	3277	while (( inode < nodes ))
	3278	do
	3279	# echo "*** all_files = \"$all_files\" "
	3280	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3281	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3282	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3283	# echo "*** files = \"$files\" "
	3284	# echo "*** all_files = \"$all_files\" "
	3285	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3286	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3287	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3288	(( inode = inode + 1 ))
	3289	done
	3290	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3291	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3292	fi
	3293	elif [[ $archive_system = ut ]]
	3294	then
	3295	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3296	if [[ $files_for_pes = false ]]
	3297	then
	3298	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3299	echo "set -x" >> archive_${frelout[$i]}
	3300	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3301	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3302	else
	3303
	3304	echo "set -x" >> archive_${frelout[$i]}
	3305	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3306	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3307	cd $tmp_data_catalog
	3308	all_files=`ls -1 ${frelout[$i]}/*`
	3309	cd - > /dev/null
	3310	(( inode = 0 ))
	3311	(( tp1 = tasks_per_node + 1 ))
	3312	while (( inode < nodes ))
	3313	do
	3314	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3315	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3316	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3317	(( inode = inode + 1 ))
	3318	done
	3319	fi
	3320	elif [[ $archive_system = none ]]
	3321	then
	3322	printf " +++ archiving on $localhost not available!\n"
	3323	fi
	3324
	3325	if [[ $archive_system != none ]]
	3326	then
	3327	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3328	then
[164]	3329	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
	3330	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3331	elif [[ $localhost = nech ]]
	3332	then
[82]	3333	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3334	fi
	3335	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3336	fi
	3337	else
	3338	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3339	fi
	3340
	3341
	3342	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3343	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3344	if [[ $files_for_pes = false ]]
	3345	then
	3346	cat /dev/null > ${pathout[$i]}
	3347	else
	3348	mkdir -p ${pathout[$i]}
	3349	fi
	3350
	3351	fi
	3352
	3353
	3354	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3355	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3356	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3357	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3358	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3359	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3360	if [[ "${actionout[$i]}" = ar ]]
	3361	then
	3362	if [[ $files_for_pes = false ]]
	3363	then
	3364	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3365	printf "\n ${pathout[$i]}"
	3366	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3367	else
	3368	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3369	printf "\n ${pathout[$i]}"
	3370	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3371	fi
	3372	mv ${localout[$i]} ${frelout[$i]}
	3373
	3374	file_saved=false
	3375
	3376	if [[ $archive_system = asterix ]]
	3377	then
	3378	do_stageout=true
	3379	(( stageout_anz = 0 ))
	3380	while [[ $do_stageout = true ]]
	3381	do
	3382	if [[ $files_for_pes = false ]]
	3383	then
	3384	stageout ${frelout[$i]} > STAGE_OUTPUT
	3385	else
	3386	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3387	fi
	3388	cat STAGE_OUTPUT
	3389	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3390	then
	3391	file_saved=true
	3392	do_stageout=false
	3393	else
	3394	if [[ $files_for_pes = false ]]
	3395	then
	3396	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3397	else
	3398	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3399	fi
	3400	(( stageout_anz = stageout_anz + 1 ))
	3401	if (( stageout_anz == 10 ))
	3402	then
	3403	printf "\n +++ stoped after 10 unsuccessful tries!"
	3404	archive_save=false
	3405	do_stageout=false
	3406	else
	3407	printf "\n *** new try to store on archive after 15 min:"
	3408	sleep 900
	3409	fi
	3410	fi
	3411	done
	3412	elif [[ $archive_system = DMF ]]
	3413	then
	3414	if [[ $files_for_pes = false ]]
	3415	then
	3416	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3417	locat=DMF
	3418	exit
	3419	else
	3420	rm -rf $ARCHIVE/${frelout[$i]}
	3421	cp -r ${frelout[$i]} $ARCHIVE
	3422	fi
	3423	file_saved=true
	3424	elif [[ $archive_system = tivoli ]]
	3425	then
	3426	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3427	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3428	# GELEGT WERDEN
	3429	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3430	chmod g+rx $tmp_data_catalog
	3431	if [[ $files_for_pes = false ]]
	3432	then
	3433	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3434	else
	3435	mkdir $tmp_data_catalog/${frelout[$i]}
	3436	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3437	fi
	3438
	3439	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3440	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3441	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3442	if [[ $files_for_pes = false ]]
	3443	then
	3444	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3445	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3446	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3447	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3448	else
	3449	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3450	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3451	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3452	fi
	3453
[164]	3454	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3455	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3456	file_saved=true
	3457
	3458	elif [[ $archive_system = ut ]]
	3459	then
	3460	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3461	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3462	# GELEGT WERDEN
	3463	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3464	chmod g+rx $tmp_data_catalog
	3465	if [[ $files_for_pes = false ]]
	3466	then
	3467	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3468	else
	3469	mkdir $tmp_data_catalog/${frelout[$i]}
	3470	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3471	fi
	3472
	3473	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3474	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3475	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3476	if [[ $files_for_pes = false ]]
	3477	then
	3478	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3479	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3480	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3481	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3482	else
	3483	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3484	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3485	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3486	fi
	3487
[82]	3488	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3489	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3490	file_saved=true
	3491
	3492	else
	3493	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3494	archive_save=false
	3495	fi
	3496	if [[ $file_saved = true ]]
	3497	then
	3498	if [[ $files_for_pes = false ]]
	3499	then
	3500	cat /dev/null > ${pathout[$i]}
	3501	else
	3502	mkdir -p ${pathout[$i]}
	3503	fi
	3504	fi
	3505	fi
	3506
	3507	# APPEND AUF LOKALER MASCHINE
	3508	if [[ "${actionout[$i]}" = "a" ]]
	3509	then
	3510	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3511	cat ${localout[$i]} >> ${pathout[$i]}
	3512	fi
	3513
	3514	# KOPIEREN AUF LOKALER MASCHINE
	3515	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3516	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3517	then
	3518
	3519	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3520	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3521	then
	3522	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
[149]	3523	if [[ $link_local_output = true ]]
	3524	then
	3525	printf " using ln -f\n"
	3526	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3527	fi
	3528	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3529	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
	3530	then
	3531	if [[ $link_local_output = true ]]
	3532	then
	3533	printf " ln failed, using cp...\n"
	3534	fi
	3535	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3536	fi
[1]	3537	else
	3538	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
[149]	3539	if [[ $link_local_output = true ]]
	3540	then
	3541	printf " using ln -f\n"
	3542	ln -f ${localout[$i]} ${pathout[$i]}
	3543	fi
	3544	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3545	if [[ ! -f "${pathout[$i]}" ]]
	3546	then
	3547	if [[ $link_local_output = true ]]
	3548	then
	3549	printf " ln failed, using cp...\n"
	3550	fi
	3551	cp ${localout[$i]} ${pathout[$i]}
	3552	fi
[1]	3553	fi
	3554
	3555	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3556	then
	3557
	3558	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3559	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3560	# WIRD DANN KOPIERT
	3561	# PER MOVE UMBENANNT WERDEN
	3562	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
[149]	3563	if [[ $link_local_output = true ]]
	3564	then
	3565	printf " using ln -f\n"
	3566	mkdir ${pathout[$i]}
	3567	cd ${localout[$i]}
	3568	for file in $(ls *)
	3569	do
	3570	ln -f $file ${pathout[$i]}
	3571	done
	3572	cd $TEMPDIR
	3573	fi
	3574	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
	3575	if [[ ! -f "${pathout[$i]}/_0000" ]]
	3576	then
	3577	if [[ $link_local_output = true ]]
	3578	then
	3579	printf " ln failed for .../_0000, using cp...\n"
	3580	fi
	3581	cp -r ${localout[$i]} ${pathout[$i]}
	3582	fi
[1]	3583
	3584	fi
	3585	fi
	3586	done
	3587	if (( i != 0 ))
	3588	then
	3589	if [[ $transfer_problems = true ]]
	3590	then
	3591	printf "\n$striche\n *** OUTPUT-files saved"
	3592	printf "\n +++ WARNING: some data transfers failed! \n"
	3593	else
	3594	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3595	fi
	3596	fi
	3597
	3598
	3599	# EVENTUELL FOLGEJOB STARTEN
	3600	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3601	if [[ -f CONTINUE_RUN ]]
	3602	then
	3603
	3604	if [[ $archive_save = true ]]
	3605	then
	3606
	3607	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3608	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3609	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3610	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3611	# HANDEN
	3612	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3613	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3614	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3615	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3616	then
	3617	mc=`echo $mc \| sed 's/#/f/g'`
	3618	fi
	3619
	3620
	3621	# JOB STARTEN
	3622	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3623	echo " $mc"
	3624	printf "\n$striche\n"
	3625	if [[ $localhost != $fromhost ]]
	3626	then
	3627
	3628	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
	3629	then
	3630	echo "*** ssh will be used to initiate restart-runs!"
	3631	echo " return_addres=\"$return_addres\" "
	3632	echo " return_username=\"$return_username\" "
	3633	if [[ $return_addres = 172.20.25.41 ]]
	3634	then
	3635	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3636	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3637	else
[33]	3638	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3639	fi
	3640	else
	3641	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3642	locat=restart; exit
	3643	fi
	3644
	3645	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3646	# DER AKTUELLE JOB ENDET
	3647	sleep 30
	3648
	3649	else
	3650
	3651	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
[108]	3652	# RUFEN WERDEN, AUSSER AUF lcfimm
[1]	3653	cd $LOCAL_PWD
[108]	3654	if [[ $localhost = lcfimm ]]
	3655	then
	3656	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
	3657	else
	3658	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	3659	fi
[1]	3660	cd - > /dev/null
	3661	fi
	3662	printf "\n$striche\n *** restart-run initiated \n"
	3663
	3664
	3665	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	3666	# GEHOLT WORDEN SIND, LOESCHEN
	3667	(( i = 0 ))
	3668	while (( i < iin ))
	3669	do
	3670	(( i = i + 1 ))
	3671	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	3672	then
	3673	rm -r $tmp_data_catalog/${frelin[$i]}
	3674	fi
	3675	done
	3676
	3677	else
	3678
	3679	printf "\n +++ no restart-run possible, since errors occured"
	3680	printf "\n during the archive process"
	3681	fi
	3682
	3683	fi
	3684
	3685
	3686
	3687	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	3688	if [[ "$email_notification" != "" ]]
	3689	then
	3690
	3691	if [[ $localhost != $fromhost ]]
	3692	then
	3693	if [[ -f CONTINUE_RUN ]]
	3694	then
	3695	echo "PALM restart run necessary" > email_text
	3696	echo "description header of actual run:" >> email_text
	3697	cat CONTINUE_RUN >> email_text
	3698	echo "mrun-command to restart:" >> email_text
	3699	echo "$mc" >> email_text
	3700	else
	3701	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	3702	fi
	3703	mail $email_notification < email_text
	3704	printf "\n *** email notification sent to \"$email_notification\" "
	3705	fi
	3706	fi
	3707
	3708
	3709
	3710	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	3711	cd $HOME
	3712	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	3713
	3714	else
	3715
	3716
	3717	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	3718	# CHENDE AKTIONEN DURCHGEFUEHRT
	3719
	3720	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	3721	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	3722	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	3723	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[123]	3724	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
[1]	3725	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	3726	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	3727	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	3728	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	3729	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	3730	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	3731	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	3732	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	3733	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	3734	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	3735	if [[ $use_openmp = true ]]
	3736	then
	3737	mrun_com=${mrun_com}" -O"
	3738	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	3739	else
	3740	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	3741	fi
	3742	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	3743	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	3744	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	3745	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
[127]	3746	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
[102]	3747	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
[1]	3748	if [[ $do_remote = true ]]
	3749	then
	3750	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	3751	fi
	3752
	3753
	3754	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	3755	jobfile=jobfile.$RANDOM
	3756
	3757
	3758	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	3759	echo "mkdir $TEMPDIR" >> $jobfile
	3760	echo "cd $TEMPDIR" >> $jobfile
	3761
	3762
	3763	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	3764	if [[ $do_trace = true ]]
	3765	then
	3766	echo "set -x" >> $jobfile
	3767	else
	3768	echo "set +vx" >> $jobfile
	3769	fi
	3770
	3771
[191]	3772	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
	3773	# DATEI FUER DEN JOB
	3774	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
[1]	3775	then
	3776
[191]	3777	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
	3778	# KOPIEREN
	3779	if [[ $restart_run != true ]]
	3780	then
	3781	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
	3782	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
	3783	fi
[1]	3784
[191]	3785	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
[193]	3786	echo "set -x" >> $jobfile
	3787	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
	3788	echo "export SOURCES_COMPLETE=true" >> $jobfile
[1]	3789
[193]	3790	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
	3791	# ARBEITSVERZEICHNIS VERSCHIEBEN
	3792	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
	3793	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
	3794	echo "execute_mrun=true" >> $jobfile
	3795	echo " " >> $jobfile
	3796
[191]	3797	else
	3798
	3799	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	3800	# SOWIE GEGEBENENFALLS DES MAKEFILES
	3801	if [[ $do_compile = true ]]
	3802	then
	3803
	3804	source_catalog=SOURCES_FOR_RUN_$fname
	3805
	3806	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	3807	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	3808	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	3809	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	3810	echo "export SOURCES_COMPLETE=true" >> $jobfile
	3811	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	3812
	3813	for filename in $source_list
	3814	do
	3815	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3816	echo "cat > $filename << \"%END%\"" >> $jobfile
	3817	cat $source_catalog/$filename >> $jobfile
	3818	echo " " >> $jobfile
	3819	echo "%END%" >> $jobfile
	3820	echo " " >> $jobfile
	3821	done
	3822
[1]	3823	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
[191]	3824	echo "cat > Makefile << \"%END%\"" >> $jobfile
	3825	cat $source_catalog/Makefile >> $jobfile
[1]	3826	echo " " >> $jobfile
	3827	echo "%END%" >> $jobfile
	3828	echo " " >> $jobfile
	3829
[191]	3830	echo "cd - > /dev/null" >> $jobfile
[1]	3831
[191]	3832	fi
[1]	3833
	3834
[191]	3835	# ABSPEICHERN DER KONFIGURATIONSDATEI
	3836	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3837	echo "cat > $config_file << \"%END%\"" >> $jobfile
	3838	cat $config_file >> $jobfile
	3839	echo "%END%" >> $jobfile
	3840	echo " " >> $jobfile
[1]	3841
	3842
[191]	3843	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	3844	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3845	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
	3846	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
	3847	echo "%END%" >> $jobfile
	3848	if [[ $host = lctit ]]
	3849	then
	3850	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	3851	echo "mv mrun_new $mrun_script_name" >> $jobfile
	3852	fi
	3853	echo "chmod u+x $mrun_script_name" >> $jobfile
	3854	echo "execute_mrun=true" >> $jobfile
	3855	echo " " >> $jobfile
[1]	3856
	3857	fi
	3858
[191]	3859
[1]	3860	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	3861	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	3862	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	3863	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	3864	if [[ $do_remote = true ]]
	3865	then
	3866	(( i = 0 ))
	3867	while (( i < iin ))
	3868	do
	3869	(( i = i + 1 ))
	3870	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	3871	if [[ "${transin[$i]}" = job ]]
	3872	then
	3873	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	3874	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	3875	echo " " >> $jobfile
	3876	echo "%END%" >> $jobfile
	3877	else
[82]	3878	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	3879	fi
	3880
	3881	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	3882	echo "if [[ \$? = 1 ]]" >> $jobfile
	3883	echo "then" >> $jobfile
	3884	echo " echo \" \" " >> $jobfile
	3885	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	3886	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	3887	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	3888	echo " execute_mrun=false" >> $jobfile
	3889	echo "fi" >> $jobfile
	3890	done
	3891	fi
	3892
	3893	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	3894	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	3895	echo "LOCAL_PWD=$working_directory" >> $jobfile
	3896	echo "export LOCAL_PWD" >> $jobfile
	3897
	3898	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	3899	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	3900	echo "export LOCAL_MRUN_PATH" >> $jobfile
	3901
[66]	3902	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	3903	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	3904	then
	3905	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	3906	fi
[1]	3907
	3908	# MRUN AUF ZIELRECHNER AUFRUFEN
	3909	echo "set -x" >> $jobfile
	3910	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	3911
	3912	echo 'ls -al; echo `pwd`' >> $jobfile
	3913	echo "cd \$HOME" >> $jobfile
	3914	echo "rm -rf $TEMPDIR" >> $jobfile
	3915
	3916
	3917
	3918
	3919	# JOB PER SUBJOB STARTEN
	3920	if [[ $silent = false ]]
	3921	then
	3922	printf "\n "
	3923	else
	3924	printf "\n\n"
	3925	fi
	3926
[164]	3927	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
[1]	3928	rm -rf $jobfile
	3929
	3930
	3931	fi # ENDE REMOTE-TEIL
	3932
	3933
	3934
	3935	# ENDE DER PROZEDUR

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