1 | <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN"> |
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2 | <HTML> |
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3 | <HEAD> |
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4 | <META HTTP-EQUIV="CONTENT-TYPE" CONTENT="text/html; charset=utf-8"> |
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5 | <TITLE>PALM technical/numerical documentation</TITLE> |
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6 | <META NAME="GENERATOR" CONTENT="OpenOffice.org 3.0 (Unix)"> |
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7 | <META NAME="AUTHOR" CONTENT="Siegfried Raasch"> |
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8 | <META NAME="CREATED" CONTENT="0;0"> |
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9 | <META NAME="CHANGED" CONTENT="20100909;12050600"> |
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10 | <META NAME="KEYWORDS" CONTENT="parallel LES model"> |
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11 | </HEAD> |
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12 | <BODY LANG="en-US" DIR="LTR"> |
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13 | <P STYLE="margin-bottom: 0in"><FONT SIZE=7>PALM </FONT>a |
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14 | <B>pa</B>rallelized <B>L</B>ES <B>m</B>odel |
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15 | </P> |
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16 | <HR> |
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17 | <P STYLE="margin-bottom: 0in"><BR><FONT SIZE=5>technical/numerical |
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18 | documentation</FONT> <BR> <BR> |
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19 | </P> |
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20 | <P ALIGN=CENTER STYLE="margin-bottom: 0in"> |
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21 | </P> |
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22 | <TABLE CELLPADDING=0 CELLSPACING=0> |
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23 | <TR> |
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24 | <TD> |
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25 | <P><B>Current fixed release:</B></P> |
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26 | </TD> |
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27 | <TD> |
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28 | <P><B>3.7a</B></P> |
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29 | </TD> |
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30 | </TR> |
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31 | <TR> |
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32 | <TD> |
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33 | <P><B>Last change of this document</B>: </P> |
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34 | </TD> |
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35 | <TD> |
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36 | <P><B>$Id: technical_documentation.html 544 2010-08-17 10:44:58Z |
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37 | maronga $</B></P> |
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38 | </TD> |
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39 | </TR> |
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40 | </TABLE> |
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41 | <HR> |
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42 | <P><FONT SIZE=5>Table of contents</FONT> <BR> <BR> |
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43 | </P> |
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44 | <UL> |
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45 | <P><A HREF="#Kapitel1.0">1.0</A> History of changes |
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46 | </P> |
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47 | <P><A HREF="#Kapitel2.0">2.0</A> How to change the source code |
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48 | and how to document modifications</P> |
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49 | <P><A HREF="#Kapitel3.0">3.0</A> Description of selected model |
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50 | numerics<BR> </P> |
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51 | </UL> |
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52 | <P><BR><BR> |
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53 | </P> |
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54 | <H2><A NAME="Kapitel1.0"></A>1.0 History of changes</H2> |
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55 | <P STYLE="margin-bottom: 0in">The following table documents all |
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56 | changes to the PALM repository since 2009. Older changes can be found |
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57 | <A HREF="tec_doc_1998-2008.html">here</A>.<BR><BR>Entries in the |
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58 | fifth column specify the type of the change: change of existing |
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59 | code (C), new code (N) or bugfix (B). More detailed information about |
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60 | the changes may sometimes be found in the header comment lines of the |
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61 | respective routines. <BR> |
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62 | </P> |
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63 | <TABLE WIDTH=1223 BORDER=1 CELLPADDING=2 CELLSPACING=3> |
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64 | <COL WIDTH=37> |
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65 | <COL WIDTH=56> |
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66 | <COL WIDTH=68> |
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67 | <COL WIDTH=62> |
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68 | <COL WIDTH=36> |
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69 | <COL WIDTH=517> |
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70 | <COL WIDTH=393> |
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71 | <TR> |
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72 | <TD WIDTH=37> |
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73 | <P><FONT SIZE=4><B>date</B></FONT></P> |
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74 | </TD> |
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75 | <TD WIDTH=56> |
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76 | <P><FONT SIZE=4><B>author</B></FONT></P> |
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77 | </TD> |
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78 | <TD WIDTH=68> |
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79 | <P><FONT SIZE=4><B>svn revision</B></FONT></P> |
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80 | </TD> |
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81 | <TD WIDTH=62> |
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82 | <P><FONT SIZE=4><B>last release</B></FONT></P> |
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83 | </TD> |
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84 | <TD WIDTH=36> |
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85 | <P><FONT SIZE=4><B>type</B></FONT></P> |
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86 | </TD> |
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87 | <TD WIDTH=517> |
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88 | <P><FONT SIZE=4><B>description</B></FONT></P> |
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89 | </TD> |
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90 | <TD WIDTH=393> |
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91 | <P><FONT SIZE=4><B>affected routines</B></FONT></P> |
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92 | </TD> |
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93 | </TR> |
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94 | <TR> |
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95 | <TD WIDTH=37 SDVAL="40430" SDNUM="1033;0;MM/DD/YY"> |
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96 | <P STYLE="font-weight: normal"><FONT SIZE=3>09/09/10</FONT></P> |
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97 | </TD> |
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98 | <TD WIDTH=56> |
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99 | <P STYLE="font-weight: normal"><FONT SIZE=3>CH</FONT></P> |
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100 | </TD> |
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101 | <TD WIDTH=68 SDVAL="560" SDNUM="1033;"> |
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102 | <P STYLE="font-weight: normal"><FONT SIZE=3>560</FONT></P> |
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103 | </TD> |
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104 | <TD WIDTH=62> |
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105 | <P STYLE="font-weight: normal"><FONT SIZE=3>3.7a</FONT></P> |
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106 | </TD> |
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107 | <TD WIDTH=36> |
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108 | <P STYLE="font-weight: normal"><FONT SIZE=3>B</FONT></P> |
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109 | </TD> |
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110 | <TD WIDTH=517> |
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111 | <P STYLE="font-weight: normal"><FONT SIZE=3>Bugfix of calculating |
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112 | <FONT FACE="Courier New, monospace">ngp_3d</FONT> for 64 bit. So |
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113 | far <FONT FACE="Courier New, monospace">ngp_3d</FONT><FONT FACE="Times New Roman, serif"> |
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114 | has not been 64 bit.</FONT></FONT></P> |
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115 | </TD> |
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116 | <TD WIDTH=393> |
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117 | <P STYLE="font-weight: normal"><FONT SIZE=3>init_3d_model</FONT></P> |
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118 | </TD> |
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119 | </TR> |
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120 | <TR> |
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121 | <TD WIDTH=37 SDVAL="40368" SDNUM="1033;0;MM/DD/YY"> |
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122 | <P STYLE="font-weight: normal"><FONT SIZE=3>07/09/10</FONT></P> |
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123 | </TD> |
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124 | <TD WIDTH=56> |
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125 | <P STYLE="font-weight: normal"><FONT SIZE=3>CH</FONT></P> |
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126 | </TD> |
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127 | <TD WIDTH=68 SDVAL="557" SDNUM="1033;"> |
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128 | <P STYLE="font-weight: normal"><FONT SIZE=3>557</FONT></P> |
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129 | </TD> |
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130 | <TD WIDTH=62> |
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131 | <P STYLE="font-weight: normal"><FONT SIZE=3>3.7a</FONT></P> |
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132 | </TD> |
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133 | <TD WIDTH=36> |
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134 | <P STYLE="font-weight: normal"><FONT SIZE=3>B</FONT></P> |
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135 | </TD> |
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136 | <TD WIDTH=517> |
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137 | <P STYLE="font-weight: normal"><FONT SIZE=3>Bugfix of message |
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138 | string in if statement (dz_stretch_level) of subroutine |
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139 | set_mask_locations.</FONT></P> |
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140 | <P STYLE="font-weight: normal"><FONT SIZE=3>The changes concern |
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141 | the masked data output, which is still not documented.</FONT></P> |
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142 | </TD> |
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143 | <TD WIDTH=393> |
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144 | <P STYLE="font-weight: normal"><FONT SIZE=3>init_masks</FONT></P> |
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145 | </TD> |
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146 | </TR> |
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147 | <TR> |
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148 | <TD WIDTH=37> |
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149 | <P>07/09/10</P> |
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150 | </TD> |
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151 | <TD WIDTH=56> |
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152 | <P>SR</P> |
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153 | </TD> |
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154 | <TD WIDTH=68> |
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155 | <P>556</P> |
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156 | </TD> |
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157 | <TD WIDTH=62> |
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158 | <P>3.7a</P> |
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159 | </TD> |
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160 | <TD WIDTH=36> |
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161 | <P>C</P> |
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162 | </TD> |
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163 | <TD WIDTH=517> |
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164 | <P>Documentation for <FONT FACE="Courier New, Courier, monospace">surface_heatflux |
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165 | </FONT>in case of <FONT FACE="Courier New, Courier, monospace">prandtl_layer |
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166 | </FONT>= <I>.F.</I> improved.<BR><BR>bugfix for wrong netcdf/3.6.3 |
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167 | module on lcsgi (mbuild, mrun)</P> |
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168 | </TD> |
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169 | <TD WIDTH=393> |
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170 | <P>mbuild, mrun</P> |
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171 | </TD> |
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172 | </TR> |
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173 | <TR> |
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174 | <TD WIDTH=37> |
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175 | <P><BR> |
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176 | </P> |
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177 | </TD> |
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178 | <TD WIDTH=56> |
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179 | <P><BR> |
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180 | </P> |
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181 | </TD> |
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182 | <TD WIDTH=68> |
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183 | <P><BR> |
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184 | </P> |
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185 | </TD> |
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186 | <TD WIDTH=62> |
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187 | <P><BR> |
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188 | </P> |
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189 | </TD> |
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190 | <TD WIDTH=36> |
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191 | <P>B</P> |
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192 | </TD> |
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193 | <TD WIDTH=517> |
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194 | <P>Bugfix in if statement (disturb_heatflux)<BR><BR>Bugfix: in |
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195 | 2201 statement: closing " was missing |
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196 | (interpret_config)<BR><BR>Bugfix: default setting of nzb_local for |
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197 | flat topography (init_grid)<BR><BR>Bugfix: wrong dimension used |
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198 | for ts_value_l (user_statistics)</P> |
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199 | </TD> |
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200 | <TD WIDTH=393> |
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201 | <P>disturb_heatflux, init_grid, user_statistics<BR><BR>interpret_config</P> |
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202 | </TD> |
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203 | </TR> |
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204 | <TR> |
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205 | <TD WIDTH=37 SDVAL="40187" SDNUM="1033;0;MM/DD/YY"> |
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206 | <P STYLE="font-weight: normal"><FONT SIZE=3>01/09/10</FONT></P> |
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207 | </TD> |
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208 | <TD WIDTH=56> |
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209 | <P STYLE="font-weight: normal"><FONT SIZE=3>CH</FONT></P> |
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210 | </TD> |
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211 | <TD WIDTH=68 SDVAL="553" SDNUM="1033;"> |
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212 | <P STYLE="font-weight: normal"><FONT SIZE=3>553</FONT></P> |
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213 | </TD> |
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214 | <TD WIDTH=62> |
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215 | <P STYLE="font-weight: normal"><FONT SIZE=3>3.7a</FONT></P> |
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216 | </TD> |
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217 | <TD WIDTH=36> |
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218 | <P STYLE="font-weight: normal"><FONT SIZE=3>C</FONT></P> |
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219 | </TD> |
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220 | <TD WIDTH=517> |
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221 | <P STYLE="font-weight: normal"><FONT SIZE=3>d3dpar-parameters for |
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222 | masked output <FONT FACE="Courier New, monospace">data_output_mask_*, |
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223 | data_output_mask_user_*, mask_*_x, mask_*_y, mask_*_z, |
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224 | mask_*_x_loop, mask_*_y_loop </FONT><FONT FACE="Times New Roman, serif">and |
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225 | </FONT><FONT FACE="Courier New, monospace">mask_*_z_loop </FONT>have |
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226 | been replaced by corresponding arrays <FONT FACE="Courier New, monospace">data_output_masks, |
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227 | data_output_masks_user, mask_x, mask_y, mask_z, mask_x_loop, |
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228 | mask_y_loop </FONT><FONT FACE="Times New Roman, serif">and</FONT> |
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229 | <FONT FACE="Courier New, monospace">mask_z_loop</FONT></FONT></P> |
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230 | <P STYLE="font-weight: normal"><FONT SIZE=3>inipar-parameter <FONT FACE="Courier New, monospace">masks</FONT> |
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231 | has been removed. </FONT> |
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232 | </P> |
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233 | <P STYLE="font-weight: normal"><FONT SIZE=3>The changes concern |
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234 | the masked data output, which is still not documented.</FONT></P> |
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235 | </TD> |
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236 | <TD WIDTH=393> |
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237 | <P STYLE="font-weight: normal"><FONT SIZE=3>check_parameters, |
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238 | init_masks, modules, parin, user_parin</FONT></P> |
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239 | </TD> |
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240 | </TR> |
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241 | <TR> |
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242 | <TD WIDTH=37> |
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243 | <P>17/08/10</P> |
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244 | </TD> |
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245 | <TD WIDTH=56> |
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246 | <P>BM</P> |
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247 | </TD> |
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248 | <TD WIDTH=68> |
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249 | <P>544</P> |
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250 | </TD> |
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251 | <TD WIDTH=62> |
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252 | <P>3.7a</P> |
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253 | </TD> |
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254 | <TD WIDTH=36> |
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255 | <P>B/C/N</P> |
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256 | </TD> |
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257 | <TD WIDTH=517> |
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258 | <P>adjustments for lcxt4; bugfix (mbuild): loading of user-defined |
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259 | modules; new .mrun.config.lcxt4 for Cray XT4 in Bergen/Norway</P> |
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260 | </TD> |
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261 | <TD WIDTH=393> |
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262 | <P>mrun, mbuild, subjob</P> |
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263 | </TD> |
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264 | </TR> |
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265 | <TR> |
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266 | <TD WIDTH=37> |
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267 | <P>15/06/10</P> |
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268 | </TD> |
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269 | <TD WIDTH=56> |
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270 | <P>RH</P> |
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271 | </TD> |
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272 | <TD WIDTH=68> |
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273 | <P>540</P> |
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274 | </TD> |
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275 | <TD WIDTH=62> |
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276 | <P>3.7a</P> |
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277 | </TD> |
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278 | <TD WIDTH=36> |
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279 | <P>C</P> |
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280 | </TD> |
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281 | <TD WIDTH=517> |
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282 | <P>ssh from compute nodes to login nodes on hosts lcsgih/lcsgib is |
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283 | done using the names hicegate0/bicegate0 instead of the IP |
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284 | addresses</P> |
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285 | </TD> |
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286 | <TD WIDTH=393> |
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287 | <P>mrun</P> |
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288 | </TD> |
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289 | </TR> |
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290 | <TR> |
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291 | <TD WIDTH=37> |
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292 | <P>21/04/10</P> |
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293 | </TD> |
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294 | <TD WIDTH=56> |
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295 | <P>RH</P> |
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296 | </TD> |
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297 | <TD WIDTH=68> |
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298 | <P>532</P> |
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299 | </TD> |
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300 | <TD WIDTH=62> |
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301 | <P>3.7a</P> |
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302 | </TD> |
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303 | <TD WIDTH=36> |
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304 | <P>C</P> |
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305 | </TD> |
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306 | <TD WIDTH=517> |
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307 | <P>Large scale vertical motion (subsidence/ascent) can be added as |
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308 | additional source to the prognostic equation for humidity/passive |
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309 | scalar<BR> <BR>character length for dopr_unit |
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310 | enlarged<BR><BR>Adjustment of the NCL scripts to allow for output |
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311 | of png files |
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312 | </P> |
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313 | </TD> |
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314 | <TD WIDTH=393> |
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315 | <P>modules, prognostic_equations<BR><BR>.ncl.config.default, |
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316 | cross_sections.ncl, profiles.ncl, timeseries.ncl, spectra.ncl</P> |
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317 | </TD> |
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318 | </TR> |
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319 | <TR> |
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320 | <TD WIDTH=37> |
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321 | <P><BR> |
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322 | </P> |
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323 | </TD> |
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324 | <TD WIDTH=56> |
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325 | <P><BR> |
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326 | </P> |
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327 | </TD> |
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328 | <TD WIDTH=68> |
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329 | <P><BR> |
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330 | </P> |
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331 | </TD> |
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332 | <TD WIDTH=62> |
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333 | <P><BR> |
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334 | </P> |
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335 | </TD> |
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336 | <TD WIDTH=36> |
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337 | <P>B</P> |
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338 | </TD> |
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339 | <TD WIDTH=517> |
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340 | <P>Bugfix: unit of hyp changed to dbar</P> |
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341 | </TD> |
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342 | <TD WIDTH=393> |
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343 | <P>check_parameters</P> |
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344 | </TD> |
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345 | </TR> |
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346 | <TR> |
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347 | <TD WIDTH=37> |
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348 | <P>01/04/10</P> |
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349 | </TD> |
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350 | <TD WIDTH=56> |
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351 | <P>RH</P> |
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352 | </TD> |
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353 | <TD WIDTH=68> |
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354 | <P>530</P> |
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355 | </TD> |
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356 | <TD WIDTH=62> |
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357 | <P>3.7a</P> |
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358 | </TD> |
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359 | <TD WIDTH=36> |
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360 | <P>B</P> |
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361 | </TD> |
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362 | <TD WIDTH=517> |
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363 | <P>Bugfix: treatment of special character * in NCL variables |
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364 | containing lists corrected</P> |
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365 | </TD> |
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366 | <TD WIDTH=393> |
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367 | <P>palmplot</P> |
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368 | </TD> |
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369 | </TR> |
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370 | <TR> |
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371 | <TD WIDTH=37> |
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372 | <P>31/03/10</P> |
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373 | </TD> |
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374 | <TD WIDTH=56> |
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375 | <P>RH</P> |
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376 | </TD> |
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377 | <TD WIDTH=68> |
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378 | <P>529</P> |
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379 | </TD> |
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380 | <TD WIDTH=62> |
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381 | <P>3.7a</P> |
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382 | </TD> |
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383 | <TD WIDTH=36> |
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384 | <P>C</P> |
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385 | </TD> |
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386 | <TD WIDTH=517> |
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387 | <P>List of variable names have to specified using blank separated |
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388 | lists and single quotes</P> |
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389 | </TD> |
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390 | <TD WIDTH=393> |
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391 | <P>palmplot</P> |
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392 | </TD> |
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393 | </TR> |
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394 | <TR> |
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395 | <TD WIDTH=37> |
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396 | <P>30/03/10</P> |
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397 | </TD> |
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398 | <TD WIDTH=56> |
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399 | <P>RH</P> |
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400 | </TD> |
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401 | <TD WIDTH=68> |
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402 | <P>526</P> |
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403 | </TD> |
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404 | <TD WIDTH=62> |
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405 | <P>3.7a</P> |
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406 | </TD> |
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407 | <TD WIDTH=36> |
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408 | <P>C</P> |
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409 | </TD> |
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410 | <TD WIDTH=517> |
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411 | <P>Adjustment of the NCL scripts and <FONT FACE="Courier New, Courier, monospace">palmplot |
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412 | </FONT>to allow for special characters in NetCDF variable names |
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413 | </P> |
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414 | </TD> |
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415 | <TD WIDTH=393> |
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416 | <P>palmplot, .ncl.config.default, cross_sections.ncl, |
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417 | profiles.ncl, timeseries.ncl, spectra.ncl</P> |
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418 | </TD> |
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419 | </TR> |
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420 | <TR> |
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421 | <TD WIDTH=37> |
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422 | <P>30/03/10</P> |
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423 | </TD> |
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424 | <TD WIDTH=56> |
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425 | <P>SR</P> |
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426 | </TD> |
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427 | <TD WIDTH=68> |
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428 | <P>525</P> |
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429 | </TD> |
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430 | <TD WIDTH=62> |
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431 | <P>3.7a</P> |
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432 | </TD> |
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433 | <TD WIDTH=36> |
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434 | <P>B</P> |
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435 | </TD> |
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436 | <TD WIDTH=517> |
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437 | <P>Bugfix: "/" in netcdf profile variable names replaced |
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438 | by ":"</P> |
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439 | </TD> |
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440 | <TD WIDTH=393> |
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441 | <P>check_parameters</P> |
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442 | </TD> |
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443 | </TR> |
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444 | <TR> |
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445 | <TD WIDTH=37> |
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446 | <P>19/03/10</P> |
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447 | </TD> |
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448 | <TD WIDTH=56> |
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449 | <P>SR</P> |
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450 | </TD> |
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451 | <TD WIDTH=68> |
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452 | <P>520</P> |
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453 | </TD> |
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454 | <TD WIDTH=62> |
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455 | <P>3.7a</P> |
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456 | </TD> |
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457 | <TD WIDTH=36> |
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458 | <P>N</P> |
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459 | </TD> |
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460 | <TD WIDTH=517> |
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461 | <P>NetCDF4 support for particle data. Total number of particles is |
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462 | allowed to increase during the run, when netcdf_data_format > <I>2</I> |
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463 | is used.</P> |
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464 | </TD> |
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465 | <TD WIDTH=393> |
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466 | <P>advec_particles, check_open, netcdf</P> |
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467 | </TD> |
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468 | </TR> |
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469 | <TR> |
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470 | <TD WIDTH=37> |
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471 | <P><BR> |
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472 | </P> |
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473 | </TD> |
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474 | <TD WIDTH=56> |
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475 | <P><BR> |
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476 | </P> |
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477 | </TD> |
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478 | <TD WIDTH=68> |
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479 | <P><BR> |
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480 | </P> |
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481 | </TD> |
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482 | <TD WIDTH=62> |
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483 | <P><BR> |
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484 | </P> |
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485 | </TD> |
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486 | <TD WIDTH=36> |
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487 | <P>C</P> |
---|
488 | </TD> |
---|
489 | <TD WIDTH=517> |
---|
490 | <P>Special characters like * and " are now allowed for NetCDF |
---|
491 | variable names. Replacement of these characters has been removed |
---|
492 | (routine clean_netcdf_varname removed)</P> |
---|
493 | </TD> |
---|
494 | <TD WIDTH=393> |
---|
495 | <P><BR> |
---|
496 | </P> |
---|
497 | </TD> |
---|
498 | </TR> |
---|
499 | <TR> |
---|
500 | <TD WIDTH=37> |
---|
501 | <P>18/03/10</P> |
---|
502 | </TD> |
---|
503 | <TD WIDTH=56> |
---|
504 | <P>SR</P> |
---|
505 | </TD> |
---|
506 | <TD WIDTH=68> |
---|
507 | <P>516</P> |
---|
508 | </TD> |
---|
509 | <TD WIDTH=62> |
---|
510 | <P>3.7a</P> |
---|
511 | </TD> |
---|
512 | <TD WIDTH=36> |
---|
513 | <P>N</P> |
---|
514 | </TD> |
---|
515 | <TD WIDTH=517> |
---|
516 | <P>Simple installation method has been documented (see chapter |
---|
517 | 5.0). Respective scripts and configuration files have been |
---|
518 | updated.</P> |
---|
519 | </TD> |
---|
520 | <TD WIDTH=393> |
---|
521 | <P>palm_simple_install, palm_simple_run</P> |
---|
522 | </TD> |
---|
523 | </TR> |
---|
524 | <TR> |
---|
525 | <TD WIDTH=37> |
---|
526 | <P><BR> |
---|
527 | </P> |
---|
528 | </TD> |
---|
529 | <TD WIDTH=56> |
---|
530 | <P><BR> |
---|
531 | </P> |
---|
532 | </TD> |
---|
533 | <TD WIDTH=68> |
---|
534 | <P><BR> |
---|
535 | </P> |
---|
536 | </TD> |
---|
537 | <TD WIDTH=62> |
---|
538 | <P><BR> |
---|
539 | </P> |
---|
540 | </TD> |
---|
541 | <TD WIDTH=36> |
---|
542 | <P>B</P> |
---|
543 | </TD> |
---|
544 | <TD WIDTH=517> |
---|
545 | <P>opt=1 is forced for PGI-compiler in routine <FONT FACE="Courier New, Courier, monospace">buoyancy |
---|
546 | </FONT>by compiler-directive. Otherwise, program aborts with |
---|
547 | SIGFPE.</P> |
---|
548 | </TD> |
---|
549 | <TD WIDTH=393> |
---|
550 | <P>buoyancy</P> |
---|
551 | </TD> |
---|
552 | </TR> |
---|
553 | <TR> |
---|
554 | <TD WIDTH=37> |
---|
555 | <P>16/03/10</P> |
---|
556 | </TD> |
---|
557 | <TD WIDTH=56> |
---|
558 | <P>RH</P> |
---|
559 | </TD> |
---|
560 | <TD WIDTH=68> |
---|
561 | <P>513</P> |
---|
562 | </TD> |
---|
563 | <TD WIDTH=62> |
---|
564 | <P>3.7a</P> |
---|
565 | </TD> |
---|
566 | <TD WIDTH=36> |
---|
567 | <P>N</P> |
---|
568 | </TD> |
---|
569 | <TD WIDTH=517> |
---|
570 | <P>NCL scripts can be run with the shell script <FONT FACE="Courier New, Courier, monospace">palmplot.</FONT></P> |
---|
571 | </TD> |
---|
572 | <TD WIDTH=393> |
---|
573 | <P>palmplot, .ncl.config.default, cross_sections.ncl, profiles.ncl</P> |
---|
574 | </TD> |
---|
575 | </TR> |
---|
576 | <TR> |
---|
577 | <TD WIDTH=37> |
---|
578 | <P>12/03/10</P> |
---|
579 | </TD> |
---|
580 | <TD WIDTH=56> |
---|
581 | <P>SR</P> |
---|
582 | </TD> |
---|
583 | <TD WIDTH=68> |
---|
584 | <P>509</P> |
---|
585 | </TD> |
---|
586 | <TD WIDTH=62> |
---|
587 | <P>3.7a</P> |
---|
588 | </TD> |
---|
589 | <TD WIDTH=36> |
---|
590 | <P>B</P> |
---|
591 | </TD> |
---|
592 | <TD WIDTH=517> |
---|
593 | <P>bugfix for rev 504: remode_md was given a wrong value</P> |
---|
594 | </TD> |
---|
595 | <TD WIDTH=393> |
---|
596 | <P>mbuild</P> |
---|
597 | </TD> |
---|
598 | </TR> |
---|
599 | <TR> |
---|
600 | <TD WIDTH=37> |
---|
601 | <P>08/03/10</P> |
---|
602 | </TD> |
---|
603 | <TD WIDTH=56> |
---|
604 | <P>SR</P> |
---|
605 | </TD> |
---|
606 | <TD WIDTH=68> |
---|
607 | <P>506</P> |
---|
608 | </TD> |
---|
609 | <TD WIDTH=62> |
---|
610 | <P>3.7a</P> |
---|
611 | </TD> |
---|
612 | <TD WIDTH=36> |
---|
613 | <P>C</P> |
---|
614 | </TD> |
---|
615 | <TD WIDTH=517> |
---|
616 | <P>hack for better usage of <B>mrun</B> on Kyoto computing center |
---|
617 | machine (<FONT FACE="Courier New, Courier, monospace">lckyoto</FONT>)</P> |
---|
618 | </TD> |
---|
619 | <TD WIDTH=393> |
---|
620 | <P>mrun</P> |
---|
621 | </TD> |
---|
622 | </TR> |
---|
623 | <TR> |
---|
624 | <TD WIDTH=37> |
---|
625 | <P>03/03/10</P> |
---|
626 | </TD> |
---|
627 | <TD WIDTH=56> |
---|
628 | <P>SR</P> |
---|
629 | </TD> |
---|
630 | <TD WIDTH=68> |
---|
631 | <P>504</P> |
---|
632 | </TD> |
---|
633 | <TD WIDTH=62> |
---|
634 | <P>3.7a</P> |
---|
635 | </TD> |
---|
636 | <TD WIDTH=36> |
---|
637 | <P>C</P> |
---|
638 | </TD> |
---|
639 | <TD WIDTH=517> |
---|
640 | <P><FONT FACE="Courier New, Courier, monospace">combine_plot_fields</FONT> |
---|
641 | is now directly called within <B>mrun</B> and must not be given by |
---|
642 | an output command in the configuration file any more. Please |
---|
643 | remove the respective output command (<FONT FACE="Courier New, Courier, monospace">OC:combine_plot_fields.x</FONT>) |
---|
644 | from your configuration file!<BR><BR>Utility programs |
---|
645 | (<FONT FACE="Courier New, Courier, monospace">combine_plot_fields</FONT>, |
---|
646 | <FONT FACE="Courier New, Courier, monospace">interpret_config</FONT>) |
---|
647 | are created by <B>mbuild</B> separately for each block in the |
---|
648 | configuration file. Depending on option <FONT FACE="Courier New, Courier, monospace">-K</FONT>, |
---|
649 | <B>mrun</B> is using the utility programs for the respective |
---|
650 | block.<BR><BR>Utility programs are also compiled in parallel, |
---|
651 | depending on variable <FONT FACE="Courier New, Courier, monospace">%mopts</FONT> |
---|
652 | in the configuration file..<BR><BR>Default configuration files |
---|
653 | updated.</P> |
---|
654 | </TD> |
---|
655 | <TD WIDTH=393> |
---|
656 | <P>mbuild, mrun, UTIL/Makefile, SCRIPTS/.mrun.config.*</P> |
---|
657 | </TD> |
---|
658 | </TR> |
---|
659 | <TR> |
---|
660 | <TD WIDTH=37> |
---|
661 | <P>02/03/10</P> |
---|
662 | </TD> |
---|
663 | <TD WIDTH=56> |
---|
664 | <P>SR</P> |
---|
665 | </TD> |
---|
666 | <TD WIDTH=68> |
---|
667 | <P>496</P> |
---|
668 | </TD> |
---|
669 | <TD WIDTH=62> |
---|
670 | <P>3.7a</P> |
---|
671 | </TD> |
---|
672 | <TD WIDTH=36> |
---|
673 | <P>C</P> |
---|
674 | </TD> |
---|
675 | <TD WIDTH=517> |
---|
676 | <P>Particle data for restart runs are only written if environment |
---|
677 | variable <FONT FACE="Courier New, Courier, monospace">write_binary</FONT> |
---|
678 | = <I>.T.</I>, i.e. particle data are now handled in the same way |
---|
679 | as the other restart data.</P> |
---|
680 | </TD> |
---|
681 | <TD WIDTH=393> |
---|
682 | <P>palm</P> |
---|
683 | </TD> |
---|
684 | </TR> |
---|
685 | <TR> |
---|
686 | <TD WIDTH=37> |
---|
687 | <P>01/03/10</P> |
---|
688 | </TD> |
---|
689 | <TD WIDTH=56> |
---|
690 | <P>SR</P> |
---|
691 | </TD> |
---|
692 | <TD WIDTH=68> |
---|
693 | <P>494</P> |
---|
694 | </TD> |
---|
695 | <TD WIDTH=62> |
---|
696 | <P>3.7a</P> |
---|
697 | </TD> |
---|
698 | <TD WIDTH=36> |
---|
699 | <P>N</P> |
---|
700 | </TD> |
---|
701 | <TD WIDTH=517> |
---|
702 | <P>Output in NetCDF4-format.<BR><BR>NetCDF4 allows for parallel |
---|
703 | I/O. Also, variables are not limited in size any more (i.e. arrays |
---|
704 | can be larger than 2GB). The new d3par-parameter |
---|
705 | <FONT FACE="Courier New, Courier, monospace">netcdf_data_format</FONT>.can |
---|
706 | be used to select among the different NetCDF file formats (<I>1</I>: |
---|
707 | classic format, <I>2</I>: 64-bit-offset format (this is now the |
---|
708 | default), <I>3</I>: NetCDF4/HDF5 format, <I>4</I>: NetCDF4 format |
---|
709 | with NF90_CLASSIC_MODEL bit set). Setting <FONT FACE="Courier New, Courier, monospace">netcdf_data_format</FONT> |
---|
710 | > <I>2</I> only affects 2d- and 3d-output, i.e. there is no |
---|
711 | parallel output for profiles, time series, spectra, and particles. |
---|
712 | Parallel output of particle data may realized in the future.<BR><BR>In |
---|
713 | case of parallel output, all PEs write into one file, which means |
---|
714 | that postprocessing the data with <FONT FACE="Courier New, Courier, monospace">combine_plot_fields</FONT> |
---|
715 | (merging data from single files - one per PE - into one file) is |
---|
716 | not neccessary. In this case, flag files are automatically set, |
---|
717 | telling <FONT FACE="Courier New, Courier, monospace">combine_plot_fields</FONT> |
---|
718 | that nothing is to be done.<BR><BR>Using NetCDF4 format requires a |
---|
719 | NetCDF4/HDF library. Respective settings for -I, -L, and -l |
---|
720 | compiler/loader options for the SGI-ICE at HLRN can be found in |
---|
721 | the new example configuration file |
---|
722 | <FONT FACE="Courier New, Courier, monospace">..../trunk/SCRIPTS/.mrun.config.imuk_ice2_netcdf4</FONT><BR><BR><B>Attention:</B><BR>So |
---|
723 | far, NetCDF parallel I/O has only been tested a little. Further |
---|
724 | performance optimizations may be required, especially in case of |
---|
725 | large data sets (e.g. data chunking, or lustre file system |
---|
726 | settings with <FONT FACE="Courier New, Courier, monospace">lfs |
---|
727 | setstripe</FONT>). <B>Please report bugs and performance problems |
---|
728 | immediately!</B><BR><BR><FONT FACE="Courier New, Courier, monospace">combine_plot_fields</FONT> |
---|
729 | outputs cpu-time needed for file merging.<BR><BR>Modules to be |
---|
730 | loaded for compilation (mbuild) or job execution (mrun) can/should |
---|
731 | now be given in the configuration file (<FONT FACE="Courier New, Courier, monospace">.mrun.config</FONT>) |
---|
732 | using variable <FONT FACE="Courier New, Courier, monospace">modules</FONT>. |
---|
733 | Example:<BR><BR> <FONT FACE="Courier New, Courier, monospace">%modules |
---|
734 | ifort/11.0.069:netcdf lcsgih |
---|
735 | parallel</FONT><BR><BR>This method replaces the (undocumented) |
---|
736 | <FONT FACE="Courier New, Courier, monospace">mpilib</FONT>-variable.<BR><BR><B>WARNING:</B><BR><B>All |
---|
737 | fixed settings of modules in the scripts mbuild, mrun, and subjob |
---|
738 | have been removed! Please set the </B><FONT FACE="Courier New, Courier, monospace"><B>modules</B></FONT> |
---|
739 | <B>variable appropriately and remove the mpilib variable in your |
---|
740 | configuration file.<BR><BR></B>Compilation time can be reduced be |
---|
741 | using parallel make. The number of allowed simultaneous compiler |
---|
742 | calls (threads) is set in the configuration file using variable |
---|
743 | <FONT FACE="Courier New, Courier, monospace">mopt</FONT>, e.g.<BR><BR> |
---|
744 | <FONT FACE="Courier New, Courier, monospace">%mopts -j:4 |
---|
745 | lcsgih parallel</FONT><BR><BR>allows a maximum of 4 routines to be |
---|
746 | compiled simultaneously (provided that the makefile does not show |
---|
747 | any dependencies between these routines).</P> |
---|
748 | </TD> |
---|
749 | <TD WIDTH=393> |
---|
750 | <P>check_open, check_parameters, close_file, data_output_2d, |
---|
751 | data_output_3d, header, modules, netcdf, |
---|
752 | parin<BR><BR>combine_plot_fields<BR><BR>mbuild, mrun, subjob</P> |
---|
753 | </TD> |
---|
754 | </TR> |
---|
755 | <TR> |
---|
756 | <TD WIDTH=37> |
---|
757 | <P><BR> |
---|
758 | </P> |
---|
759 | </TD> |
---|
760 | <TD WIDTH=56> |
---|
761 | <P><BR> |
---|
762 | </P> |
---|
763 | </TD> |
---|
764 | <TD WIDTH=68> |
---|
765 | <P><BR> |
---|
766 | </P> |
---|
767 | </TD> |
---|
768 | <TD WIDTH=62> |
---|
769 | <P><BR> |
---|
770 | </P> |
---|
771 | </TD> |
---|
772 | <TD WIDTH=36> |
---|
773 | <P>C</P> |
---|
774 | </TD> |
---|
775 | <TD WIDTH=517> |
---|
776 | <P>d3par-parameters <FONT FACE="Courier New, Courier, monospace">netcdf_64bit</FONT> |
---|
777 | and <FONT FACE="Courier New, Courier, monospace">netcdf_64bit_3d</FONT> |
---|
778 | have been removed. Use the new d3par-variable <FONT FACE="Courier New, Courier, monospace">netcdf_data_format</FONT> |
---|
779 | = <I>2</I> for choosing the NetCDF 64bit-offset format (this is |
---|
780 | the default from now on). The offset-format can not be set |
---|
781 | independently for the 3d-output-data any more.<BR><BR>d3par-parameters |
---|
782 | <FONT FACE="Courier New, Courier, monospace">netcdf_format_mask</FONT>, |
---|
783 | <FONT FACE="Courier New, Courier, monospace">netcdf_format_mask_av</FONT>, |
---|
784 | and variables <FONT FACE="Courier New, Courier, monospace">nc_format_mask</FONT>, |
---|
785 | <FONT FACE="Courier New, Courier, monospace">format_parallel_io</FONT> |
---|
786 | removed. They are replaced by the new parameter |
---|
787 | <FONT FACE="Courier New, Courier, monospace">netcdf_data_format</FONT>. |
---|
788 | This change concerns the masked data output, which is still not |
---|
789 | documented.</P> |
---|
790 | </TD> |
---|
791 | <TD WIDTH=393> |
---|
792 | <P>check_open, close_file,<BR>data_output_mask, header, |
---|
793 | init_masks, modules, parin</P> |
---|
794 | </TD> |
---|
795 | </TR> |
---|
796 | <TR> |
---|
797 | <TD WIDTH=37> |
---|
798 | <P><BR> |
---|
799 | </P> |
---|
800 | </TD> |
---|
801 | <TD WIDTH=56> |
---|
802 | <P><BR> |
---|
803 | </P> |
---|
804 | </TD> |
---|
805 | <TD WIDTH=68> |
---|
806 | <P><BR> |
---|
807 | </P> |
---|
808 | </TD> |
---|
809 | <TD WIDTH=62> |
---|
810 | <P><BR> |
---|
811 | </P> |
---|
812 | </TD> |
---|
813 | <TD WIDTH=36> |
---|
814 | <P>B</P> |
---|
815 | </TD> |
---|
816 | <TD WIDTH=517> |
---|
817 | <P>Bugfix in trunk/UTIL/Makefile: forgot to compile for |
---|
818 | interpret_config.<BR><BR>Bugfix: timeseries data have to be |
---|
819 | collected by PE0 (user_statistics).</P> |
---|
820 | </TD> |
---|
821 | <TD WIDTH=393> |
---|
822 | <P>user_statistics<BR><BR>trunk/UTIL/Makefile</P> |
---|
823 | </TD> |
---|
824 | </TR> |
---|
825 | <TR> |
---|
826 | <TD WIDTH=37> |
---|
827 | <P>05/02/10</P> |
---|
828 | </TD> |
---|
829 | <TD WIDTH=56> |
---|
830 | <P>SR</P> |
---|
831 | </TD> |
---|
832 | <TD WIDTH=68> |
---|
833 | <P>485</P> |
---|
834 | </TD> |
---|
835 | <TD WIDTH=62> |
---|
836 | <P>3.7a</P> |
---|
837 | </TD> |
---|
838 | <TD WIDTH=36> |
---|
839 | <P>B</P> |
---|
840 | </TD> |
---|
841 | <TD WIDTH=517> |
---|
842 | <P><FONT FACE="Courier New, Courier, monospace">ngp_3d</FONT>, |
---|
843 | <FONT FACE="Courier New, Courier, monospace">ngp_3d_inner</FONT> |
---|
844 | changed to 64 bit. Otherwise, on large grids > 2*10**9 grid |
---|
845 | points some global statistics (e.g. total kinetic energy) have |
---|
846 | wrong values.</P> |
---|
847 | </TD> |
---|
848 | <TD WIDTH=393> |
---|
849 | <P>init_3d_model, modules</P> |
---|
850 | </TD> |
---|
851 | </TR> |
---|
852 | <TR> |
---|
853 | <TD WIDTH=37> |
---|
854 | <P>05/02/10</P> |
---|
855 | </TD> |
---|
856 | <TD WIDTH=56> |
---|
857 | <P>SR</P> |
---|
858 | </TD> |
---|
859 | <TD WIDTH=68> |
---|
860 | <P>484</P> |
---|
861 | </TD> |
---|
862 | <TD WIDTH=62> |
---|
863 | <P>3.7a</P> |
---|
864 | </TD> |
---|
865 | <TD WIDTH=36> |
---|
866 | <P>B</P> |
---|
867 | </TD> |
---|
868 | <TD WIDTH=517> |
---|
869 | <P>Typo in file headers removed ("current" instead of |
---|
870 | "actual").</P> |
---|
871 | </TD> |
---|
872 | <TD WIDTH=393> |
---|
873 | <P>many</P> |
---|
874 | </TD> |
---|
875 | </TR> |
---|
876 | <TR> |
---|
877 | <TD WIDTH=37> |
---|
878 | <P>05/02/10</P> |
---|
879 | </TD> |
---|
880 | <TD WIDTH=56> |
---|
881 | <P>SR</P> |
---|
882 | </TD> |
---|
883 | <TD WIDTH=68> |
---|
884 | <P>483</P> |
---|
885 | </TD> |
---|
886 | <TD WIDTH=62> |
---|
887 | <P>3.7a</P> |
---|
888 | </TD> |
---|
889 | <TD WIDTH=36> |
---|
890 | <P>N</P> |
---|
891 | </TD> |
---|
892 | <TD WIDTH=517> |
---|
893 | <P><FONT FACE="Courier New, Courier, monospace">compare_palm_logs |
---|
894 | </FONT>is additionally compiled with <B>mbuild</B> <FONT FACE="Courier New, Courier, monospace">-u</FONT> |
---|
895 | . (<FONT FACE="Courier New, Courier, monospace">Makefile</FONT> in |
---|
896 | <FONT FACE="Courier New, Courier, monospace">trunk/UTIL</FONT>)<BR><BR>make |
---|
897 | options (<FONT FACE="Courier New, Courier, monospace">mopts</FONT>) |
---|
898 | to be set by configuration file implemented. (<B>mrun</B>, |
---|
899 | <B>mbuild</B>)<BR><BR><FONT FACE="Courier New, Courier, monospace">humidity</FONT> |
---|
900 | = <I>.T.</I> can be used for runs with topography. |
---|
901 | <FONT FACE="Courier New, Courier, monospace">wall_humidityflux</FONT> |
---|
902 | and<BR><FONT FACE="Courier New, Courier, monospace">wall_scalarflux</FONT> |
---|
903 | are the corresponding new inipar parameters.<BR>(<FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>, |
---|
904 | <FONT FACE="Courier New, Courier, monospace">init_3d_model</FONT>, |
---|
905 | <FONT FACE="Courier New, Courier, monospace">parin</FONT>)<BR><BR>Large |
---|
906 | scale vertical motion (subsidence/ascent) can be added as |
---|
907 | additional source to the prognostic equation for potential |
---|
908 | temperature. See new parameters <FONT FACE="Courier New, Courier, monospace">large_scale_subsidence</FONT>, |
---|
909 | <FONT FACE="Courier New, Courier, monospace">ws_vertical_gradient</FONT>, |
---|
910 | and <FONT FACE="Courier New, Courier, monospace">ws_vertical_gradient_level</FONT>. |
---|
911 | (<FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>, |
---|
912 | <FONT FACE="Courier New, Courier, monospace">header</FONT>, |
---|
913 | <FONT FACE="Courier New, Courier, monospace">Makefile</FONT>, |
---|
914 | <FONT FACE="Courier New, Courier, monospace">modules</FONT>, |
---|
915 | <FONT FACE="Courier New, Courier, monospace">parin</FONT>, |
---|
916 | <FONT FACE="Courier New, Courier, monospace">prognostic_equations</FONT>, |
---|
917 | <FONT FACE="Courier New, Courier, monospace">read_var_list</FONT>, |
---|
918 | <FONT FACE="Courier New, Courier, monospace">subsidence</FONT>, |
---|
919 | <FONT FACE="Courier New, Courier, monospace">write_var_list</FONT>)<BR><BR>Scripts |
---|
920 | have been updated for Cray-XT5 machine (lcxt5m) and |
---|
921 | Hitachi-machine (lckyoto).<BR><BR>A simple method for installing |
---|
922 | and running palm (with limited features) has been added. |
---|
923 | (<FONT FACE="Courier New, Courier, monospace">Makefile</FONT>, new |
---|
924 | scripts <B>palm_simple_install</B>, <B>palm_simple_run</B>)<BR><BR>Masked |
---|
925 | data output has been implemented but it is not documented in the |
---|
926 | user manual so far. This feature can already use NetCDF4 file |
---|
927 | format. (check_open, check_parameters, close_file, modules, |
---|
928 | netcdf, parin, time_integration, user_parin, new: |
---|
929 | data_output_mask, init_masks, user_data_output_mask)</P> |
---|
930 | </TD> |
---|
931 | <TD WIDTH=393> |
---|
932 | <P>check_open, check parameters, close_file, header, |
---|
933 | init_3d_model, Makefile, mbuild, modules, mrun, netcdf, parin, |
---|
934 | prognostic_equations, read_var_list, time_integration, user_parin, |
---|
935 | write_var_list<BR><BR><B>new:</B> data_output_mask, |
---|
936 | init_masks, palm_simple_install, palm_simple_run, subsidence, |
---|
937 | user_data_output_mask</P> |
---|
938 | </TD> |
---|
939 | </TR> |
---|
940 | <TR> |
---|
941 | <TD WIDTH=37> |
---|
942 | <P><BR> |
---|
943 | </P> |
---|
944 | </TD> |
---|
945 | <TD WIDTH=56> |
---|
946 | <P><BR> |
---|
947 | </P> |
---|
948 | </TD> |
---|
949 | <TD WIDTH=68> |
---|
950 | <P><BR> |
---|
951 | </P> |
---|
952 | </TD> |
---|
953 | <TD WIDTH=62> |
---|
954 | <P><BR> |
---|
955 | </P> |
---|
956 | </TD> |
---|
957 | <TD WIDTH=36> |
---|
958 | <P>C</P> |
---|
959 | </TD> |
---|
960 | <TD WIDTH=517> |
---|
961 | <P>2d-decomposition is default for Cray-XT machines. |
---|
962 | (<FONT FACE="Courier New, Courier, monospace">init_pegrid</FONT>)<BR><BR><FONT FACE="Courier New, Courier, monospace">var_ts</FONT> |
---|
963 | is replaced by <FONT FACE="Courier New, Courier, monospace">dots_max</FONT>. |
---|
964 | (<FONT FACE="Courier New, Courier, monospace">modules</FONT>, |
---|
965 | <FONT FACE="Courier New, Courier, monospace">init_3d_model</FONT>)<BR><BR>Every |
---|
966 | cloud droplet has now an own weighting factor and can be deleted |
---|
967 | due to collisions. Condensation and collision of cloud droplets |
---|
968 | are adjusted accordingly. (<FONT FACE="Courier New, Courier, monospace">advec_particles</FONT>)<BR><BR>Collision |
---|
969 | efficiency for large cloud droplets has changed according to table |
---|
970 | of Rogers and Yau. (<FONT FACE="Courier New, Courier, monospace">collision_efficiency</FONT>)</P> |
---|
971 | </TD> |
---|
972 | <TD WIDTH=393> |
---|
973 | <P>advec_particles, collision_efficiency, init_3d_model, |
---|
974 | init_pegrid, modules</P> |
---|
975 | </TD> |
---|
976 | </TR> |
---|
977 | <TR> |
---|
978 | <TD WIDTH=37> |
---|
979 | <P><BR> |
---|
980 | </P> |
---|
981 | </TD> |
---|
982 | <TD WIDTH=56> |
---|
983 | <P><BR> |
---|
984 | </P> |
---|
985 | </TD> |
---|
986 | <TD WIDTH=68> |
---|
987 | <P><BR> |
---|
988 | </P> |
---|
989 | </TD> |
---|
990 | <TD WIDTH=62> |
---|
991 | <P><BR> |
---|
992 | </P> |
---|
993 | </TD> |
---|
994 | <TD WIDTH=36> |
---|
995 | <P>B</P> |
---|
996 | </TD> |
---|
997 | <TD WIDTH=517> |
---|
998 | <P>Bugfix for generating serial jobs. (<B>subjob</B>)<BR><BR>Bugfix: |
---|
999 | index problem concerning gradient_level indices removed. |
---|
1000 | (<FONT FACE="Courier New, Courier, monospace">header</FONT>)<BR><BR>Dimension |
---|
1001 | of array <FONT FACE="Courier New, Courier, monospace">stat</FONT> |
---|
1002 | in cascade change to prevent type problems with mpi2 libraries. |
---|
1003 | (<FONT FACE="Courier New, Courier, monospace">poisfft_hybrid</FONT>)<BR><BR>Loop |
---|
1004 | was split to make runs reproducible when using ifort compiler. |
---|
1005 | (<FONT FACE="Courier New, Courier, monospace">disturb_field</FONT>)<BR><BR>Bugfix: |
---|
1006 | exchange of ghost points for <FONT FACE="Courier New, Courier, monospace">prho</FONT> |
---|
1007 | included. (<FONT FACE="Courier New, Courier, monospace">time_integration</FONT>)<BR><BR>Bugfix |
---|
1008 | in calculation of time-averaged surface heatfluxes. |
---|
1009 | (<FONT FACE="Courier New, Courier, monospace">sum_up_3d_data</FONT>)<BR><BR>Bugfix |
---|
1010 | in calculation of precipitation_rate. |
---|
1011 | (<FONT FACE="Courier New, Courier, monospace">calc_precipitation</FONT>)<BR><BR>Bugfix: |
---|
1012 | initial data assignments to some dvrp arrays changed due to error |
---|
1013 | messages from gfortran compiler. (<FONT FACE="Courier New, Courier, monospace">modules</FONT>)<BR><BR>Bugfix |
---|
1014 | in calculation of cloud droplet velocity. |
---|
1015 | (<FONT FACE="Courier New, Courier, monospace">advec_particles</FONT>)<BR><BR>Bugfix |
---|
1016 | in transfer of particles at south/left edge. |
---|
1017 | (<FONT FACE="Courier New, Courier, monospace">advec_particles</FONT>)<BR><BR>Bugfix |
---|
1018 | in calculation of collision efficiency. (<FONT FACE="Courier New, Courier, monospace">collision_efficiency</FONT>)</P> |
---|
1019 | </TD> |
---|
1020 | <TD WIDTH=393> |
---|
1021 | <P>advec_particles, calc_precipitation, collision_efficiency, |
---|
1022 | disturb_field, header, modules, poisfft_hybrid, subjob, |
---|
1023 | sum_up_3d_data, time_integration</P> |
---|
1024 | </TD> |
---|
1025 | </TR> |
---|
1026 | <TR> |
---|
1027 | <TD WIDTH=37> |
---|
1028 | <P>23/09/09</P> |
---|
1029 | </TD> |
---|
1030 | <TD WIDTH=56> |
---|
1031 | <P>SR</P> |
---|
1032 | </TD> |
---|
1033 | <TD WIDTH=68> |
---|
1034 | <P>392</P> |
---|
1035 | </TD> |
---|
1036 | <TD WIDTH=62> |
---|
1037 | <P>3.7</P> |
---|
1038 | </TD> |
---|
1039 | <TD WIDTH=36> |
---|
1040 | <P>N</P> |
---|
1041 | </TD> |
---|
1042 | <TD WIDTH=517> |
---|
1043 | <P><B>Most important changes:</B> atmosphere-ocean coupling has |
---|
1044 | been improved and steering of dvr-software is more user-friendly |
---|
1045 | now. Beside that, the release contains a lot of optimizations, |
---|
1046 | changes, and bugfixes which have accumulated over the last |
---|
1047 | months.<BR><BR>The atmosphere-ocean coupling allows to use |
---|
1048 | independent precursor runs in order to account for different |
---|
1049 | spin-up times. The time when coupling has to be started is given |
---|
1050 | by new inipar parameter <FONT FACE="Courier New, Courier, monospace">coupling_start_time</FONT>. |
---|
1051 | The precursor ocean run has to be started using new <B>mrun</B> |
---|
1052 | option "<FONT FACE="Courier New, Courier, monospace">-y</FONT>" |
---|
1053 | in order to add the appendix "<FONT FACE="Courier New, Courier, monospace">_O</FONT>" |
---|
1054 | to all output files. (<FONT FACE="Courier New, Courier, monospace">check_for_restart</FONT>, |
---|
1055 | <FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>, |
---|
1056 | <FONT FACE="Courier New, Courier, monospace">data_output_2d</FONT>, |
---|
1057 | <FONT FACE="Courier New, Courier, monospace">data_output_3d</FONT>, |
---|
1058 | <FONT FACE="Courier New, Courier, monospace">data_output_profiles</FONT>, |
---|
1059 | <FONT FACE="Courier New, Courier, monospace">data_output_ptseries</FONT>, |
---|
1060 | <FONT FACE="Courier New, Courier, monospace">data_output_spectra</FONT>, |
---|
1061 | <FONT FACE="Courier New, Courier, monospace">data_output_tseries</FONT>, |
---|
1062 | <FONT FACE="Courier New, Courier, monospace">header</FONT>, |
---|
1063 | <FONT FACE="Courier New, Courier, monospace">init_coupling</FONT>, |
---|
1064 | <FONT FACE="Courier New, Courier, monospace">modules</FONT>, <FONT FACE="Courier New, Courier, monospace">mrun</FONT>, |
---|
1065 | <FONT FACE="Courier New, Courier, monospace">parin</FONT>, |
---|
1066 | <FONT FACE="Courier New, Courier, monospace">read_var_list</FONT>, |
---|
1067 | <FONT FACE="Courier New, Courier, monospace">surface_coupler</FONT>, |
---|
1068 | <FONT FACE="Courier New, Courier, monospace">time_integration</FONT>, |
---|
1069 | <FONT FACE="Courier New, Courier, monospace">write_var_list</FONT>)<BR><BR>Clipping |
---|
1070 | of dvrp output implemented. Default colourtable for particles |
---|
1071 | implemented, particle attributes (color, dvrp_size) can be set |
---|
1072 | with new parameters <FONT FACE="Courier New, Courier, monospace">particle_color</FONT>, |
---|
1073 | <FONT FACE="Courier New, Courier, monospace">particle_dvrpsize</FONT>, |
---|
1074 | <FONT FACE="Courier New, Courier, monospace">color_interval</FONT>, |
---|
1075 | <FONT FACE="Courier New, Courier, monospace">dvrpsize_interval</FONT>. |
---|
1076 | Slicer attributes (dvrp) are set with new routine |
---|
1077 | <FONT FACE="Courier New, Courier, monospace">set_slicer_attributes_dvrp</FONT> |
---|
1078 | and are controlled with existing parameters <FONT FACE="Courier New, Courier, monospace">slicer_range_limits</FONT>. |
---|
1079 | (<FONT FACE="Courier New, Courier, monospace">init_dvrp</FONT>, |
---|
1080 | <FONT FACE="Courier New, Courier, monospace">data_output_dvrp</FONT>, |
---|
1081 | <FONT FACE="Courier New, Courier, monospace">modules</FONT>, |
---|
1082 | <FONT FACE="Courier New, Courier, monospace">set_slicer_attributes_dvrp</FONT>, |
---|
1083 | <FONT FACE="Courier New, Courier, monospace">user_data_output_dvrp</FONT>)<BR><BR>Polygon |
---|
1084 | reduction for topography and ground plate isosurface. Reduction |
---|
1085 | level for buildings can be chosen with parameter cluster_size. |
---|
1086 | (<FONT FACE="Courier New, Courier, monospace">init_dvrp</FONT>)<BR><BR>Variables |
---|
1087 | <FONT FACE="Courier New, Courier, monospace">bc_lr</FONT> / <FONT FACE="Courier New, Courier, monospace">bc_ns</FONT> |
---|
1088 | in most subroutines replaced by LOGICAL variables |
---|
1089 | <FONT FACE="Courier New, Courier, monospace">bc_lr_cyc</FONT>,<BR><FONT FACE="Courier New, Courier, monospace">bc_ns_cyc</FONT> |
---|
1090 | for speed optimization. This gives a significant speedup of more |
---|
1091 | than 10%. (<FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>, |
---|
1092 | <FONT FACE="Courier New, Courier, monospace">diffusion_u</FONT>, |
---|
1093 | <FONT FACE="Courier New, Courier, monospace">diffusion_v</FONT>, |
---|
1094 | <FONT FACE="Courier New, Courier, monospace">diffusion_w</FONT>, |
---|
1095 | <FONT FACE="Courier New, Courier, monospace">modules</FONT>)<BR><BR>Scripts |
---|
1096 | have been adapted for machine lck (Yonsei Univ.). (<FONT FACE="Courier New, Courier, monospace">mrun</FONT>, |
---|
1097 | <FONT FACE="Courier New, Courier, monospace">mbuild</FONT>, |
---|
1098 | <FONT FACE="Courier New, Courier, monospace">subjob</FONT>)<BR><BR>Additional |
---|
1099 | timestep criterion in case of simulations with plant canopy. |
---|
1100 | (<FONT FACE="Courier New, Courier, monospace">timestep</FONT>)<BR><BR>Check |
---|
1101 | for illegal entries in <FONT FACE="Courier New, Courier, monospace">section_xy</FONT>|<FONT FACE="Courier New, Courier, monospace">xz</FONT>|<FONT FACE="Courier New, Courier, monospace">yz</FONT> |
---|
1102 | that exceed <FONT FACE="Courier New, Courier, monospace">nz+1</FONT>|<FONT FACE="Courier New, Courier, monospace">ny+1</FONT>|<FONT FACE="Courier New, Courier, monospace">nx+1</FONT>. |
---|
1103 | (<FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>)<BR><BR>External |
---|
1104 | pressure gradient can be used as driving force. (<FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>, |
---|
1105 | <FONT FACE="Courier New, Courier, monospace">header</FONT>, |
---|
1106 | <FONT FACE="Courier New, Courier, monospace">init_3d_model</FONT>, |
---|
1107 | <FONT FACE="Courier New, Courier, monospace">modules</FONT>, |
---|
1108 | <FONT FACE="Courier New, Courier, monospace">parin</FONT>, |
---|
1109 | <FONT FACE="Courier New, Courier, monospace">prognostic_equations</FONT>, |
---|
1110 | <FONT FACE="Courier New, Courier, monospace">read_var_list</FONT>, |
---|
1111 | <FONT FACE="Courier New, Courier, monospace">write_var_list</FONT>)<BR><BR>New |
---|
1112 | topography case '<I>single_street_canyon</I>'. (<FONT FACE="Courier New, Courier, monospace">header</FONT>, |
---|
1113 | <FONT FACE="Courier New, Courier, monospace">init_grid</FONT>, |
---|
1114 | <FONT FACE="Courier New, Courier, monospace">modules</FONT>, |
---|
1115 | <FONT FACE="Courier New, Courier, monospace">parin</FONT>, |
---|
1116 | <FONT FACE="Courier New, Courier, monospace">read_var_list</FONT>, |
---|
1117 | <FONT FACE="Courier New, Courier, monospace">user_check_parameters</FONT>, |
---|
1118 | <FONT FACE="Courier New, Courier, monospace">user_header</FONT>, |
---|
1119 | <FONT FACE="Courier New, Courier, monospace">user_init_grid</FONT>, |
---|
1120 | <FONT FACE="Courier New, Courier, monospace">write_var_list</FONT>)<BR><BR>Option |
---|
1121 | to predefine a target bulk velocity for <FONT FACE="Courier New, Courier, monospace">conserve_volume_flow</FONT>. |
---|
1122 | (<FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>, |
---|
1123 | <FONT FACE="Courier New, Courier, monospace">header</FONT>, |
---|
1124 | <FONT FACE="Courier New, Courier, monospace">init_3d_model</FONT>, |
---|
1125 | <FONT FACE="Courier New, Courier, monospace">modules</FONT>, |
---|
1126 | <FONT FACE="Courier New, Courier, monospace">parin</FONT>, |
---|
1127 | <FONT FACE="Courier New, Courier, monospace">read_var_list</FONT>, |
---|
1128 | <FONT FACE="Courier New, Courier, monospace">write_var_list</FONT>)<BR><BR>Option |
---|
1129 | for user defined 2D data output in xy cross sections at z=<FONT FACE="Courier New, Courier, monospace">nzb</FONT>+1. |
---|
1130 | (<FONT FACE="Courier New, Courier, monospace">data_output_2d</FONT>, |
---|
1131 | <FONT FACE="Courier New, Courier, monospace">user_data_output_2d</FONT>)<BR><BR>xy |
---|
1132 | cross section output of surface heatfluxes (sensible and latent). |
---|
1133 | (<FONT FACE="Courier New, Courier, monospace">average_3d_data</FONT>, |
---|
1134 | <FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>, |
---|
1135 | <FONT FACE="Courier New, Courier, monospace">data_output_2d</FONT>, |
---|
1136 | <FONT FACE="Courier New, Courier, monospace">modules</FONT>, |
---|
1137 | <FONT FACE="Courier New, Courier, monospace">read_3d_binary</FONT>, |
---|
1138 | <FONT FACE="Courier New, Courier, monospace">sum_up_3d_data</FONT>, |
---|
1139 | <FONT FACE="Courier New, Courier, monospace">write_3d_binary</FONT>)</P> |
---|
1140 | </TD> |
---|
1141 | <TD WIDTH=393> |
---|
1142 | <P>average_3d_data, check_for_restart, check_parameters, |
---|
1143 | data_output_2d, data_output_3d, data_output_dvrp, |
---|
1144 | data_output_profiles, data_output_ptseries, data_output_spectra, |
---|
1145 | data_output_tseries, diffusion_u, diffusion_v, diffusion_w, |
---|
1146 | init_coupling, init_dvrp, init_grid, init_3d_model, header, |
---|
1147 | mbuild, modules, mrun, package_parin, parin, prognostic_equations, |
---|
1148 | read_3d_binary, read_var_list, subjob, sum_up_3d_data, |
---|
1149 | surface_coupler, timestep, time_integration, |
---|
1150 | user_check_parameters, user_data_output_2d, user_data_output_dvrp, |
---|
1151 | user_header, user_init_grid, write_3d_binary, write_var_list<BR><BR><B>new:</B> |
---|
1152 | set_particle_attributes, set_slicer_attributes_dvrp</P> |
---|
1153 | </TD> |
---|
1154 | </TR> |
---|
1155 | <TR> |
---|
1156 | <TD WIDTH=37> |
---|
1157 | <P><BR> |
---|
1158 | </P> |
---|
1159 | </TD> |
---|
1160 | <TD WIDTH=56> |
---|
1161 | <P><BR> |
---|
1162 | </P> |
---|
1163 | </TD> |
---|
1164 | <TD WIDTH=68> |
---|
1165 | <P><BR> |
---|
1166 | </P> |
---|
1167 | </TD> |
---|
1168 | <TD WIDTH=62> |
---|
1169 | <P><BR> |
---|
1170 | </P> |
---|
1171 | </TD> |
---|
1172 | <TD WIDTH=36> |
---|
1173 | <P>C</P> |
---|
1174 | </TD> |
---|
1175 | <TD WIDTH=517> |
---|
1176 | <P>Output of messages replaced by message handling routine. |
---|
1177 | (<FONT FACE="Courier New, Courier, monospace">advec_particles</FONT>, |
---|
1178 | <FONT FACE="Courier New, Courier, monospace">advec_s_bc</FONT>, |
---|
1179 | <FONT FACE="Courier New, Courier, monospace">buoyancy</FONT>, |
---|
1180 | <FONT FACE="Courier New, Courier, monospace">calc_spectra</FONT>, |
---|
1181 | <FONT FACE="Courier New, Courier, monospace">check_for_restart</FONT>, |
---|
1182 | <FONT FACE="Courier New, Courier, monospace">check_open</FONT>, |
---|
1183 | <FONT FACE="Courier New, Courier, monospace">coriolis</FONT>, |
---|
1184 | <FONT FACE="Courier New, Courier, monospace">cpu_log</FONT>, |
---|
1185 | <FONT FACE="Courier New, Courier, monospace">data_output_2d</FONT>, |
---|
1186 | <FONT FACE="Courier New, Courier, monospace">data_output_3d</FONT>, |
---|
1187 | <FONT FACE="Courier New, Courier, monospace">data_output_dvrp</FONT>, |
---|
1188 | <FONT FACE="Courier New, Courier, monospace">data_output_profiles</FONT>, |
---|
1189 | <FONT FACE="Courier New, Courier, monospace">data_output_spectra</FONT>, |
---|
1190 | <FONT FACE="Courier New, Courier, monospace">fft_xy</FONT>, |
---|
1191 | <FONT FACE="Courier New, Courier, monospace">flow_statistics</FONT>, |
---|
1192 | <FONT FACE="Courier New, Courier, monospace">header</FONT>, |
---|
1193 | <FONT FACE="Courier New, Courier, monospace">init_1d_model</FONT>, |
---|
1194 | <FONT FACE="Courier New, Courier, monospace">init_3d_model</FONT>, |
---|
1195 | <FONT FACE="Courier New, Courier, monospace">init_dvrp</FONT>, |
---|
1196 | <FONT FACE="Courier New, Courier, monospace">init_grid</FONT>, |
---|
1197 | <FONT FACE="Courier New, Courier, monospace">init_particles</FONT>, |
---|
1198 | <FONT FACE="Courier New, Courier, monospace">init_pegrid</FONT>, |
---|
1199 | <FONT FACE="Courier New, Courier, monospace">netcdf</FONT>, <FONT FACE="Courier New, Courier, monospace">parin</FONT>, |
---|
1200 | <FONT FACE="Courier New, Courier, monospace">plant_canopy_model</FONT>, |
---|
1201 | <FONT FACE="Courier New, Courier, monospace">poisfft_hybrid</FONT>, |
---|
1202 | <FONT FACE="Courier New, Courier, monospace">poismg</FONT>, |
---|
1203 | <FONT FACE="Courier New, Courier, monospace">read_3d_binary</FONT>, |
---|
1204 | <FONT FACE="Courier New, Courier, monospace">read_var_list</FONT>, |
---|
1205 | <FONT FACE="Courier New, Courier, monospace">surface_coupler</FONT>, |
---|
1206 | <FONT FACE="Courier New, Courier, monospace">temperton_fft</FONT>, |
---|
1207 | <FONT FACE="Courier New, Courier, monospace">timestep</FONT>, |
---|
1208 | <FONT FACE="Courier New, Courier, monospace">user_actions</FONT>, |
---|
1209 | <FONT FACE="Courier New, Courier, monospace">user_data_output_dvrp</FONT>, |
---|
1210 | <FONT FACE="Courier New, Courier, monospace">user_dvrp_coltab</FONT>, |
---|
1211 | <FONT FACE="Courier New, Courier, monospace">user_init_grid</FONT>, |
---|
1212 | <FONT FACE="Courier New, Courier, monospace">user_init_plant_canopy</FONT>, |
---|
1213 | <FONT FACE="Courier New, Courier, monospace">user_parin</FONT>, |
---|
1214 | <FONT FACE="Courier New, Courier, monospace">user_read_restart_data</FONT>, |
---|
1215 | <FONT FACE="Courier New, Courier, monospace">user_spectra</FONT>)<BR><BR>Output |
---|
1216 | of NetCDF messages with aid of message handling routine. |
---|
1217 | (<FONT FACE="Courier New, Courier, monospace">check_open</FONT>, |
---|
1218 | <FONT FACE="Courier New, Courier, monospace">close_file</FONT>, |
---|
1219 | <FONT FACE="Courier New, Courier, monospace">data_output_2d</FONT>, |
---|
1220 | <FONT FACE="Courier New, Courier, monospace">data_output_3d</FONT>, |
---|
1221 | <FONT FACE="Courier New, Courier, monospace">data_output_profiles</FONT>, |
---|
1222 | <FONT FACE="Courier New, Courier, monospace">data_output_ptseries</FONT>, |
---|
1223 | <FONT FACE="Courier New, Courier, monospace">data_output_spectra</FONT>, |
---|
1224 | <FONT FACE="Courier New, Courier, monospace">data_output_tseries</FONT>, |
---|
1225 | <FONT FACE="Courier New, Courier, monospace">netcdf</FONT>)<BR><BR>__lcmuk |
---|
1226 | changed to __lc to avoid problems with Intel compiler on sgi-ice. |
---|
1227 | (<FONT FACE="Courier New, Courier, monospace">poisfft</FONT>)<BR><BR>For |
---|
1228 | extended NetCDF files, the updated title attribute includes an |
---|
1229 | update of time_average_text where appropriate. (<FONT FACE="Courier New, Courier, monospace">netcdf</FONT>)<BR><BR>In |
---|
1230 | case of restart runs without extension, initial profiles are not |
---|
1231 | written to NetCDF-file anymore. So far, time axis always started |
---|
1232 | at t=0. (<FONT FACE="Courier New, Courier, monospace">data_output_profiles</FONT>, |
---|
1233 | <FONT FACE="Courier New, Courier, monospace">modules</FONT>, |
---|
1234 | <FONT FACE="Courier New, Courier, monospace">read_var_list</FONT>, |
---|
1235 | <FONT FACE="Courier New, Courier, monospace">write_var_list</FONT>)<BR><BR><FONT FACE="Courier New, Courier, monospace">initializing_actions</FONT>='<I>read_data_for_recycling</I>' |
---|
1236 | renamed to '<I>cyclic_fill</I>'. A cyclic fill can now <BR>be used |
---|
1237 | independent of <FONT FACE="Courier New, Courier, monospace">turbulent_inflow</FONT>. |
---|
1238 | (<FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>, |
---|
1239 | <FONT FACE="Courier New, Courier, monospace">header</FONT>, |
---|
1240 | <FONT FACE="Courier New, Courier, monospace">init_3d_model</FONT>)<BR><BR>2 |
---|
1241 | NetCDF error numbers changed. (<FONT FACE="Courier New, Courier, monospace">data_output_3d</FONT>)<BR><BR>A |
---|
1242 | link to the webspage appendix_a.html is printed for further |
---|
1243 | information about possible reasons of the error that appeared. |
---|
1244 | (message)<BR><BR>Temperature gradient criterion for estimating the |
---|
1245 | boundary layer height replaced by the gradient criterion of |
---|
1246 | Sullivan et al. (1998). (<FONT FACE="Courier New, Courier, monospace">flow_statistics</FONT>)<BR><BR>NetCDF |
---|
1247 | unit attribute in timeseries output in case of statistic regions |
---|
1248 | added. (<FONT FACE="Courier New, Courier, monospace">netcdf</FONT>)<BR><BR>Maximum |
---|
1249 | number of tails is calculated from maximum number of particles and |
---|
1250 | <FONT FACE="Courier New, Courier, monospace">skip_particles_for_tail</FONT>. |
---|
1251 | (<FONT FACE="Courier New, Courier, monospace">init_particles</FONT>)<BR><BR>Value |
---|
1252 | of <FONT FACE="Courier New, Courier, monospace">vertical_particle_advection</FONT> |
---|
1253 | is allowed to differ for each particle group. (<FONT FACE="Courier New, Courier, monospace">advec_particles</FONT>, |
---|
1254 | <FONT FACE="Courier New, Courier, monospace">header</FONT>, |
---|
1255 | <FONT FACE="Courier New, Courier, monospace">modules</FONT>) |
---|
1256 | <BR><BR>First constant in array <FONT FACE="Courier New, Courier, monospace">den</FONT> |
---|
1257 | also defined as type double. (<FONT FACE="Courier New, Courier, monospace">eqn_state_seawater</FONT>)<BR><BR>Parameter |
---|
1258 | <FONT FACE="Courier New, Courier, monospace">dvrp_psize</FONT> |
---|
1259 | moved from <FONT FACE="Courier New, Courier, monospace">particles_par</FONT> |
---|
1260 | to <FONT FACE="Courier New, Courier, monospace">dvrp_graphics_par</FONT>. |
---|
1261 | (<FONT FACE="Courier New, Courier, monospace">package_parin</FONT>)<BR><BR><FONT FACE="Courier New, Courier, monospace">topography_grid_convention</FONT> |
---|
1262 | moved from <FONT FACE="Courier New, Courier, monospace">userpar</FONT> |
---|
1263 | to <FONT FACE="Courier New, Courier, monospace">inipar</FONT> |
---|
1264 | (<FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>, |
---|
1265 | <FONT FACE="Courier New, Courier, monospace">header</FONT>, <FONT FACE="Courier New, Courier, monospace">parin</FONT>, |
---|
1266 | <FONT FACE="Courier New, Courier, monospace">read_var_list</FONT>, |
---|
1267 | <FONT FACE="Courier New, Courier, monospace">user_check_parameters</FONT>, |
---|
1268 | <FONT FACE="Courier New, Courier, monospace">user_header</FONT>, |
---|
1269 | <FONT FACE="Courier New, Courier, monospace">user_init_grid</FONT>, |
---|
1270 | <FONT FACE="Courier New, Courier, monospace">user_parin</FONT>, |
---|
1271 | <FONT FACE="Courier New, Courier, monospace">write_var_list</FONT>)<BR><BR>Default |
---|
1272 | value of <FONT FACE="Courier New, Courier, monospace">grid_matching</FONT> |
---|
1273 | changed to '<I>strict</I>'. (<FONT FACE="Courier New, Courier, monospace">modules</FONT>)<BR><BR>Adjustments |
---|
1274 | for runs on lcxt4 (necessary due to a software update on CRAY) and |
---|
1275 | for coupled runs on ibmy. (<FONT FACE="Courier New, Courier, monospace">mrun</FONT>, |
---|
1276 | <FONT FACE="Courier New, Courier, monospace">subjob</FONT>)</P> |
---|
1277 | </TD> |
---|
1278 | <TD WIDTH=393> |
---|
1279 | <P>advec_particles, advec_s_bc, buoyancy, calc_spectra, |
---|
1280 | check_for_restart, check_open, check_parameters, close_file, |
---|
1281 | coriolis, cpu_log, data_output_2d, data_output_3d, |
---|
1282 | data_output_dvrp, data_output_profiles, data_output_ptseries, |
---|
1283 | data_output_spectra, data_output_tseries, eqn_state_seawater, |
---|
1284 | fft_xy, flow_statistics, header, init_1d_model, init_3d_model, |
---|
1285 | init_dvrp, init_grid, init_particles, init_pegrid, message, mrun, |
---|
1286 | netcdf, package_parin, parin, plant_canopy_model, poisfft, |
---|
1287 | poisfft_hybrid, poismg, read_3d_binary, read_var_list, subjob, |
---|
1288 | surface_coupler, temperton_fft, timestep, |
---|
1289 | user_actions,user_check_parameters, user_data_output_dvrp, |
---|
1290 | user_dvrp_coltab, user_header, user_init_grid, |
---|
1291 | user_init_plant_canopy, user_parin, user_read_restart_data, |
---|
1292 | user_spectra, write_var_list |
---|
1293 | </P> |
---|
1294 | </TD> |
---|
1295 | </TR> |
---|
1296 | <TR> |
---|
1297 | <TD WIDTH=37> |
---|
1298 | <P><BR> |
---|
1299 | </P> |
---|
1300 | </TD> |
---|
1301 | <TD WIDTH=56> |
---|
1302 | <P><BR> |
---|
1303 | </P> |
---|
1304 | </TD> |
---|
1305 | <TD WIDTH=68> |
---|
1306 | <P><BR> |
---|
1307 | </P> |
---|
1308 | </TD> |
---|
1309 | <TD WIDTH=62> |
---|
1310 | <P><BR> |
---|
1311 | </P> |
---|
1312 | </TD> |
---|
1313 | <TD WIDTH=36> |
---|
1314 | <P>B</P> |
---|
1315 | </TD> |
---|
1316 | <TD WIDTH=517> |
---|
1317 | <P>Bugfix: Initial hydrostatic pressure profile in case of ocean |
---|
1318 | runs is now calculated in 5 iteration steps. (<FONT FACE="Courier New, Courier, monospace">init_ocean</FONT>)<BR><BR>Bugfix: |
---|
1319 | wrong sign in buoyancy production of ocean part in case of not |
---|
1320 | using the reference density (only in 3D routine <FONT FACE="Courier New, Courier, monospace">production_e</FONT>). |
---|
1321 | (<FONT FACE="Courier New, Courier, monospace">production_e</FONT>)<BR><BR>Bugfix: |
---|
1322 | output of averaged 2d/3d quantities requires that an avaraging |
---|
1323 | interval has been set, respective error message is included. |
---|
1324 | (<FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>)<BR><BR>Bugfix: |
---|
1325 | Output on unit 14 only if requested by <FONT FACE="Courier New, Courier, monospace">write_binary</FONT>. |
---|
1326 | (<FONT FACE="Courier New, Courier, monospace">user_last_actions</FONT>)<BR><BR>Bugfix |
---|
1327 | to avoid zero division by <FONT FACE="Courier New, Courier, monospace">km_neutral</FONT>. |
---|
1328 | (<FONT FACE="Courier New, Courier, monospace">production_e</FONT>)<BR><BR>Bugfix |
---|
1329 | for extended NetCDF files: In order to avoid 'data mode' errors if |
---|
1330 | updated attributes are larger than their original size, |
---|
1331 | <FONT FACE="Courier New, Courier, monospace">NF90_PUT_ATT</FONT> |
---|
1332 | is called in 'define mode' enclosed by <FONT FACE="Courier New, Courier, monospace">NF90_REDEF</FONT> |
---|
1333 | and <FONT FACE="Courier New, Courier, monospace">NF90_ENDDEF</FONT> |
---|
1334 | calls. This implies a possible performance loss; an alternative |
---|
1335 | strategy would be to ensure equal attribute size in a job chain. |
---|
1336 | (<FONT FACE="Courier New, Courier, monospace">netcdf</FONT>)<BR><BR>Bugfix: |
---|
1337 | correction of initial volume flow for non-flat topography. |
---|
1338 | (<FONT FACE="Courier New, Courier, monospace">init_3d_model</FONT>)<BR><BR>Bugfix: |
---|
1339 | zero initialization of arrays within buildings for '<I>cyclic_fill</I>'. |
---|
1340 | (<FONT FACE="Courier New, Courier, monospace">init_3d_model</FONT>)<BR><BR>Bugfix: |
---|
1341 | <FONT FACE="Courier New, Courier, monospace">to_be_resorted</FONT> |
---|
1342 | => <FONT FACE="Courier New, Courier, monospace">s_av</FONT> for |
---|
1343 | time-averaged scalars. (<FONT FACE="Courier New, Courier, monospace">data_output_2d</FONT>, |
---|
1344 | <FONT FACE="Courier New, Courier, monospace">data_output_3d</FONT>)<BR><BR>Bugfix: |
---|
1345 | avoid that <FONT FACE="Courier New, Courier, monospace">ngp_2dh_s_inner</FONT> |
---|
1346 | becomes zero. (<FONT FACE="Courier New, Courier, monospace">init_3_model</FONT>)<BR><BR>Typographical |
---|
1347 | error: unit of wpt in dots_unit. (<FONT FACE="Courier New, Courier, monospace">modules</FONT>)<BR><BR>Bugfix: |
---|
1348 | error in check, if particles moved further than one subdomain |
---|
1349 | length. This check must not be applied for newly released |
---|
1350 | particles. (<FONT FACE="Courier New, Courier, monospace">advec_particles</FONT>)<BR><BR>Bugfix: |
---|
1351 | several tail counters are initialized, <FONT FACE="Courier New, Courier, monospace">particle_tail_coordinates</FONT> |
---|
1352 | is only written to file if its third index is > 0, arrays for |
---|
1353 | tails are allocated with a minimum size of 10 tails if there is no |
---|
1354 | tail initially. (<FONT FACE="Courier New, Courier, monospace">advec_particles</FONT>, |
---|
1355 | <FONT FACE="Courier New, Courier, monospace">init_particles</FONT>)<BR><BR>Bugfix: |
---|
1356 | pressure included for profile output. (<FONT FACE="Courier New, Courier, monospace">check_parameters</FONT>)<BR><BR>Bugfix: |
---|
1357 | Type of <FONT FACE="Courier New, Courier, monospace">count</FONT> |
---|
1358 | and <FONT FACE="Courier New, Courier, monospace">count_rate</FONT> |
---|
1359 | changed to default <FONT FACE="Courier New, Courier, monospace">INTEGER</FONT> |
---|
1360 | on NEC machines. (<FONT FACE="Courier New, Courier, monospace">cpu_log</FONT>)<BR><BR>Bugfix: |
---|
1361 | output of particle time series only if particle advection is |
---|
1362 | switched on. (<FONT FACE="Courier New, Courier, monospace">time_integration</FONT>)<BR><BR>Bugfix: |
---|
1363 | qsws was calculated in case of <FONT FACE="Courier New, Courier, monospace">constant |
---|
1364 | heatflux</FONT> = <FONT FACE="Courier New, Courier, monospace">.FALSE.</FONT>. |
---|
1365 | (<FONT FACE="Courier New, Courier, monospace">prandtl_fluxes</FONT>)<BR><BR>Bugfix: |
---|
1366 | averaging along z is not allowed for 2d quantities (e.g. u* and |
---|
1367 | z0). (<FONT FACE="Courier New, Courier, monospace">data_output_2d</FONT>)<BR><BR>Typographical |
---|
1368 | errors. (<FONT FACE="Courier New, Courier, monospace">netcdf</FONT>)<BR><BR>If |
---|
1369 | the inversion height calculated by the prerun is zero, |
---|
1370 | inflow_damping_height must be explicitly specified. |
---|
1371 | (<FONT FACE="Courier New, Courier, monospace">init_3d_model</FONT>)<BR><BR>Small |
---|
1372 | bugfix concerning 3d 64bit netcdf output format. (<FONT FACE="Courier New, Courier, monospace">header</FONT>)<BR><BR>Bugfix: |
---|
1373 | <FONT FACE="Courier New, Courier, monospace">dt_fixed</FONT> |
---|
1374 | removed from the restart file, because otherwise, no change from a |
---|
1375 | fixed to a variable timestep would be possible in restart runs. |
---|
1376 | (<FONT FACE="Courier New, Courier, monospace">read_var_list</FONT>, |
---|
1377 | <FONT FACE="Courier New, Courier, monospace">write_var_list</FONT>)<BR><BR>Bugfix: |
---|
1378 | initial setting of <FONT FACE="Courier New, Courier, monospace">time_coupling</FONT> |
---|
1379 | in coupled restart runs. (<FONT FACE="Courier New, Courier, monospace">time_integration</FONT>)</P> |
---|
1380 | </TD> |
---|
1381 | <TD WIDTH=393> |
---|
1382 | <P>advec_particles, check_parameters, cpu_log, data_output_2d, |
---|
1383 | data_output_3d, header, init_3d_model, init_particles, init_ocean, |
---|
1384 | modules, netcdf, prandtl_fluxes, production_e, read_var_list, |
---|
1385 | time_integration, user_last_actions, write_var_list</P> |
---|
1386 | </TD> |
---|
1387 | </TR> |
---|
1388 | <TR> |
---|
1389 | <TD WIDTH=37> |
---|
1390 | <P>02/02/09</P> |
---|
1391 | </TD> |
---|
1392 | <TD WIDTH=56> |
---|
1393 | <P>SR</P> |
---|
1394 | </TD> |
---|
1395 | <TD WIDTH=68> |
---|
1396 | <P>228</P> |
---|
1397 | </TD> |
---|
1398 | <TD WIDTH=62> |
---|
1399 | <P>3.6</P> |
---|
1400 | </TD> |
---|
1401 | <TD WIDTH=36> |
---|
1402 | <P>N</P> |
---|
1403 | </TD> |
---|
1404 | <TD WIDTH=517> |
---|
1405 | <P>This release contains further additions, changes, and bugfixes |
---|
1406 | for the SGI-ICE system, as well as important changes like the |
---|
1407 | splitting of the user-interface into single files, a complete |
---|
1408 | revision of the pre-compiling mechanism allowing to use different |
---|
1409 | make-depositories simultaneously, and a revision of the |
---|
1410 | reading-mechanism from restart files, which has no more |
---|
1411 | restrictions in case that the previous and current run have |
---|
1412 | different domain/subdomain sizes. A new handling of all kind of |
---|
1413 | output messages is introduced with this release and will be |
---|
1414 | applied to all existing messages within the next releases.<BR><BR><B>New |
---|
1415 | features are:</B><BR><BR>Restart runs on SGI-ICE are working. |
---|
1416 | (mrun)<BR>2d-decomposition is default on SGI-ICE systems. |
---|
1417 | (init_pegrid)<BR><BR>Ocean-atmosphere coupling realized with |
---|
1418 | MPI-1. mrun adjusted for this case (-Y option). Check that PALM is |
---|
1419 | called with <FONT FACE="Courier New, Courier, monospace">mrun</FONT>-option |
---|
1420 | "<I>-K parallel</I>" for coupling. Adjustments in <FONT FACE="Courier New, Courier, monospace">mrun</FONT>, |
---|
1421 | <FONT FACE="Courier New, Courier, monospace">mbuild</FONT>, and |
---|
1422 | <FONT FACE="Courier New, Courier, monospace">subjob</FONT> for |
---|
1423 | lcxt4.<BR><BR>DVRP arguments changed to single precision, mode |
---|
1424 | pathlines added.<BR><BR>User can add additional routines in files |
---|
1425 | <FONT FACE="Courier New, Courier, monospace">user_additional_routines</FONT>.<BR><BR>User |
---|
1426 | can check user parameters and deduce further quantities in |
---|
1427 | <FONT FACE="Courier New, Courier, monospace">user_check_parameters</FONT></P> |
---|
1428 | </TD> |
---|
1429 | <TD WIDTH=393> |
---|
1430 | <P>check_for_restart, check_parameters, data_output_dvrp, |
---|
1431 | init_dvrp, init_pegrid, local_stop, modules, package_parin, palm, |
---|
1432 | surface_coupler, timestep<BR><BR>Makefile, mbuild, mrun, |
---|
1433 | subjob<BR><BR><B>new:</B><BR>init_coupling, |
---|
1434 | user_additional_routines, user_check_parameters</P> |
---|
1435 | </TD> |
---|
1436 | </TR> |
---|
1437 | <TR> |
---|
1438 | <TD WIDTH=37> |
---|
1439 | <P><BR> |
---|
1440 | </P> |
---|
1441 | </TD> |
---|
1442 | <TD WIDTH=56> |
---|
1443 | <P><BR> |
---|
1444 | </P> |
---|
1445 | </TD> |
---|
1446 | <TD WIDTH=68> |
---|
1447 | <P><BR> |
---|
1448 | </P> |
---|
1449 | </TD> |
---|
1450 | <TD WIDTH=62> |
---|
1451 | <P><BR> |
---|
1452 | </P> |
---|
1453 | </TD> |
---|
1454 | <TD WIDTH=36> |
---|
1455 | <P>C</P> |
---|
1456 | </TD> |
---|
1457 | <TD WIDTH=517> |
---|
1458 | <P>User interface has been split into single files.<BR><BR>Type of |
---|
1459 | variables <FONT FACE="Courier New, Courier, monospace">count</FONT> |
---|
1460 | and <FONT FACE="Courier New, Courier, monospace">count_rate</FONT> |
---|
1461 | changed to INTEGER(8) in order to avoid "out of range" |
---|
1462 | problems, which result in measured negative time intervals. |
---|
1463 | (cpu_log, local_tremain, local_tremain_ini)<BR><BR>Reading |
---|
1464 | mechanism from restart files completely revised. The |
---|
1465 | subdomain/total domain size is now allowed to vary arbitrarily |
---|
1466 | between the current and previous run. (read_var_list, |
---|
1467 | read_3d_binary, user_read_restart_data)<BR><BR>Precompilation |
---|
1468 | mechanism (<FONT FACE="Courier New, Courier, monospace">mbuild</FONT>) |
---|
1469 | completely revised: the source-tarfile remains in the source |
---|
1470 | directory (<FONT FACE="Courier New, Courier, monospace">trunk/SOURCE</FONT>). |
---|
1471 | One depository per block (given in the config-file) is created. |
---|
1472 | Always all files from the source directory are copied to the |
---|
1473 | respective depository. No additional file checks are done any more |
---|
1474 | (mrun version 2.1). The depository name used contains the |
---|
1475 | conditions given by <FONT FACE="Courier New, Courier, monospace">mrun</FONT>-option |
---|
1476 | "<FONT FACE="Courier New, Courier, monospace">-K</FONT>". |
---|
1477 | (mbuild, mrun)<BR><BR>Output messages (including required stop of |
---|
1478 | execution) can now be handled with the new subroutine <FONT FACE="Courier New, Courier, monospace">message</FONT>. |
---|
1479 | All output messages will be replaced by this routine step by step |
---|
1480 | within the next revisions.<BR><BR>Neumann boundary condition at |
---|
1481 | <FONT FACE="Courier New, Courier, monospace">k=nzb</FONT> is |
---|
1482 | explicitly set for better reading, although this has been already |
---|
1483 | done in boundary_conds. (advec_s_bc)<BR><BR>Origin of the |
---|
1484 | xy-coordinate system shifted from the center of the first grid |
---|
1485 | cell (indices <FONT FACE="Courier New, Courier, monospace">i=0</FONT>, |
---|
1486 | <FONT FACE="Courier New, Courier, monospace">j=0</FONT>) to the |
---|
1487 | south-left corner of this cell. (netcdf) Topography definition |
---|
1488 | according to new user parameter <FONT FACE="Courier New, Courier, monospace">topography_grid_convention</FONT>. |
---|
1489 | (init_grid, modules, user_header, user_init_grid, user_parin)</P> |
---|
1490 | </TD> |
---|
1491 | <TD WIDTH=393> |
---|
1492 | <P>advec_s_bc, check_parameters, cpu_log, init_grid, local_stop, |
---|
1493 | local_tremain, local_tremain_ini, modules, netcdf, read_3d_binary, |
---|
1494 | read_var_list, user_read_restart_data<BR><BR>Makefile, mbuild, |
---|
1495 | mrun<BR><BR><B>removed:</B><BR>user_interface<BR><BR><B>new:</B><BR>message, |
---|
1496 | user_3d_data_averaging, user_actions, user_advec_particles, |
---|
1497 | user_check_data_output, user_check_data_output_pr, |
---|
1498 | user_data_output_2d, user_data_output_3d, user_data_output_dvrp, |
---|
1499 | user_define_netcdf_grid, user_dvrp_coltab, user_header, |
---|
1500 | user_init_3d_model, user_init, user_init_grid, |
---|
1501 | user_init_particles, user_init_plant_canopy, user_last_actions, |
---|
1502 | user_parin, user_parin, user_particle_attributes, |
---|
1503 | user_read_restart_data, user_spectra, user_statistics</P> |
---|
1504 | </TD> |
---|
1505 | </TR> |
---|
1506 | <TR> |
---|
1507 | <TD WIDTH=37> |
---|
1508 | <P><BR> |
---|
1509 | </P> |
---|
1510 | </TD> |
---|
1511 | <TD WIDTH=56> |
---|
1512 | <P><BR> |
---|
1513 | </P> |
---|
1514 | </TD> |
---|
1515 | <TD WIDTH=68> |
---|
1516 | <P><BR> |
---|
1517 | </P> |
---|
1518 | </TD> |
---|
1519 | <TD WIDTH=62> |
---|
1520 | <P><BR> |
---|
1521 | </P> |
---|
1522 | </TD> |
---|
1523 | <TD WIDTH=36> |
---|
1524 | <P>B</P> |
---|
1525 | </TD> |
---|
1526 | <TD WIDTH=517> |
---|
1527 | <P>Bugfix: array <FONT FACE="Courier New, Courier, monospace">d</FONT> |
---|
1528 | is reallocated in case that multigrid is used. |
---|
1529 | (calc_spectra)<BR><BR>Bugfixes for nonparallel execution. |
---|
1530 | (check_for_restart, cpu_statistics, |
---|
1531 | inflow_turbulence, timestep)<BR><BR>Size of <FONT FACE="Courier New, Courier, monospace">pf3d |
---|
1532 | </FONT>adjusted to the required output size (1 gridpoint less, |
---|
1533 | along all three dimensions), because output of a subset of the |
---|
1534 | data (<FONT FACE="Courier New, Courier, monospace">pf3d(nxa:nxe...)</FONT>) |
---|
1535 | in the NF90_PUT_VAR statement caused segmentation fault with the |
---|
1536 | INTEL compiler. (combine_plot_fields)<BR><BR>Bugfix: error in <FONT FACE="Courier New, Courier, monospace">zu</FONT> |
---|
1537 | index in case of <FONT FACE="Courier New, Courier, monospace">section_xy=-1</FONT>. |
---|
1538 | (header)<BR><BR>Inconsistency removed: as the thermal |
---|
1539 | stratification is not taken into account for the evaluation of the |
---|
1540 | wall fluxes at vertical walls, the eddy viscosity <FONT FACE="Courier New, Courier, monospace">km</FONT> |
---|
1541 | must not be used for the evaluation of the velocity gradients |
---|
1542 | <FONT FACE="Courier New, Courier, monospace">dudy</FONT>, <FONT FACE="Courier New, Courier, monospace">dwdy</FONT>, |
---|
1543 | <FONT FACE="Courier New, Courier, monospace">dvdx</FONT> and <FONT FACE="Courier New, Courier, monospace">dwdx</FONT>. |
---|
1544 | (production_e)<BR><BR>Bugfix in calculating <FONT FACE="Courier New, Courier, monospace">k</FONT> |
---|
1545 | index in case of oceans runs. (sort_particles)<BR><BR>Bugfix: no |
---|
1546 | output of particle concentration and radius unless particles have |
---|
1547 | been started. (data_output_2d)<BR><BR>Bugfix: reading of |
---|
1548 | <FONT FACE="Courier New, Courier, monospace">spectrum_x|y</FONT> |
---|
1549 | from restart files ignored if total numbers of grid points do not |
---|
1550 | match. (read_3d_binary)<BR><BR>Bugfix: abort in case that absolute |
---|
1551 | temperature is below zero. (init_cloud_physics)</P> |
---|
1552 | </TD> |
---|
1553 | <TD WIDTH=393> |
---|
1554 | <P>advec_particles, calc_spectra, check_for_restart, |
---|
1555 | cpu_statistics, data_output_2d, header, inflow_turbulence, |
---|
1556 | init_cloud_physics, production_e, read_3d_binary, |
---|
1557 | timestep<BR><BR>combine_plot_fields</P> |
---|
1558 | </TD> |
---|
1559 | </TR> |
---|
1560 | </TABLE> |
---|
1561 | <P><BR> <BR> |
---|
1562 | </P> |
---|
1563 | <H2><A NAME="Kapitel2.0"></A>2.0 How to change the source code |
---|
1564 | and how to document modifications</H2> |
---|
1565 | <P>Currently (Sep 23rd, 2009), only selected users are allowed to |
---|
1566 | commit changes to the repository. Rules given below are preliminary, |
---|
1567 | until we have switched to the "trac"-System.</P> |
---|
1568 | <OL> |
---|
1569 | <LI><P>Change source code in your current working copy. Document |
---|
1570 | changes in the respective file headers unter "<FONT FACE="Courier New, Courier, monospace">Current |
---|
1571 | revisions:</FONT>". Additionally, document all changes in a |
---|
1572 | local file (e.g. ~/palm/current_version/CURRENT_MODIFICATIONS), |
---|
1573 | including the files that have been changed. Classify changes in |
---|
1574 | three cases, new (N), changed (C), and bugfix (B). <B>Try to be as |
---|
1575 | short and as precise as possible in describing the changes!</B></P> |
---|
1576 | <LI><P>Test the changed version, unless it works sufficiently.</P> |
---|
1577 | <LI><P>Commit the changes to the repository<BR><BR> <FONT FACE="Courier New, Courier, monospace">svn |
---|
1578 | commit -m "message string" trunk<BR></FONT><BR>where |
---|
1579 | "<FONT FACE="Courier New, Courier, monospace">message string</FONT>" |
---|
1580 | is a short, <B>meaningful</B> summary of the |
---|
1581 | changes.<BR><BR>Alternatively, in case that you have made quite a |
---|
1582 | lot of changes, you can also give the contents of your file |
---|
1583 | CURRENT_MODIFICATIONS as the log message:<BR><BR> <FONT FACE="Courier New, Courier, monospace">svn |
---|
1584 | commit -F CURRENT_MODIFICATIONS trunk</FONT></P> |
---|
1585 | <LI><P>Enter the changes into the technical documentation (under |
---|
1586 | <FONT FACE="Courier New, Courier, monospace">.../trunk/DOC/tec/technical_documentation.html</FONT>).</P> |
---|
1587 | <LI><P>Move the change comments in the file headers from "Current |
---|
1588 | revisions:" to "Former revisions:". Set the current |
---|
1589 | svn id in front of that.<BR><BR><B>Example:</B><BR><BR><B>before |
---|
1590 | move:</B><BR><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1591 | Current revisions:</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1592 | -----------------</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1593 | </FONT><FONT FACE="Courier New, Courier, monospace"><B>new dummy |
---|
1594 | argument abcd</B></FONT><BR><FONT FACE="Courier New, Courier, monospace">!</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1595 | Former revisions:</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1596 | -----------------</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1597 | §Id: init_3d_model.f90 </FONT><FONT COLOR="#3366ff"><FONT FACE="Courier New, Courier, monospace"><B>425 |
---|
1598 | 2010-02-06 13:37:48Z raasch</B></FONT></FONT> <FONT FACE="Courier New, Courier, monospace">§</FONT><BR><FONT FACE="Courier New, Courier, monospace">!</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1599 | 407 2009-12-01 15:01:15Z maronga</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1600 | var_ts is replaced by dots_max </FONT><BR><BR><B>after move:</B><BR><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1601 | Current revisions:</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1602 | -----------------</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1603 | </FONT><BR><FONT FACE="Courier New, Courier, monospace">!</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1604 | Former revisions:</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1605 | -----------------</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1606 | §Id: init_3d_model.f90 425 2010-02-06 13:37:48Z raasch</FONT> <FONT FACE="Courier New, Courier, monospace">§<BR>!</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1607 | </FONT><FONT COLOR="#3366ff"><FONT FACE="Courier New, Courier, monospace"><B>425 |
---|
1608 | 2010-02-06 13:37:48Z raasch</B></FONT></FONT><FONT FACE="Courier New, Courier, monospace"><BR>! |
---|
1609 | </FONT><FONT FACE="Courier New, Courier, monospace"><B>new dummy |
---|
1610 | argument abcd</B></FONT><BR><FONT FACE="Courier New, Courier, monospace">!</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1611 | 407 2009-12-01 15:01:15Z maronga</FONT><BR><FONT FACE="Courier New, Courier, monospace">! |
---|
1612 | var_ts is replaced by dots_max<BR><BR></FONT><FONT FACE="Times New Roman, Times, serif">Note |
---|
1613 | that the "</FONT><FONT FACE="Courier New, Courier, monospace">§</FONT><FONT FACE="Times New Roman, Times, serif">" |
---|
1614 | in this example should read "$", but "$" cannot |
---|
1615 | be used here, because otherwise svn would replace these entries |
---|
1616 | after every change to this technical documentation.</FONT></P> |
---|
1617 | <LI><P>Commit the changes in the technical documentation and the |
---|
1618 | file headers:<BR><BR> <FONT FACE="Courier New, Courier, monospace">svn |
---|
1619 | commit -m "last commit documented" trunk</FONT><BR><BR><BR> |
---|
1620 | </P> |
---|
1621 | </OL> |
---|
1622 | <H2><A NAME="Kapitel3.0"></A>3.0 Description of selected parts |
---|
1623 | of the model source code</H2> |
---|
1624 | <P>This section gives links to existing descriptions about special |
---|
1625 | parts of the PALM code, e.g. special numerical methods that are used |
---|
1626 | (including mathematical background). Documents are stored in single |
---|
1627 | files with different formats. Some are in German (sorry for the |
---|
1628 | inconvenience). <BR> |
---|
1629 | </P> |
---|
1630 | <UL> |
---|
1631 | <LI><P STYLE="margin-bottom: 0in"><A NAME="UPS"></A>upstream-spline |
---|
1632 | advection scheme ( <A HREF="methods/upstream_spline/ups.pdf">.pdf</A> |
---|
1633 | , only in German) |
---|
1634 | </P> |
---|
1635 | <LI><P STYLE="margin-bottom: 0in"><A NAME="Cloud_physics"></A>cloud |
---|
1636 | physics module ( <A HREF="methods/cloud_physics/cloud_physics.pdf">.pdf</A> |
---|
1637 | ) |
---|
1638 | </P> |
---|
1639 | <LI><P STYLE="margin-bottom: 0in"><A NAME="Bitkompression"></A>data |
---|
1640 | compression with <A HREF="methods/bit_compression/bit_compression.html">bit |
---|
1641 | shifting method</A> (only in German)</P> |
---|
1642 | <LI><P>Runge-Kutta time integration scheme ( <A HREF="methods/runge_kutta/runge_kutta.pdf">.pdf</A> |
---|
1643 | , only in German) |
---|
1644 | </P> |
---|
1645 | </UL> |
---|
1646 | <P><BR> <BR> <BR> <BR> <BR> <BR> |
---|
1647 | <BR> <BR> |
---|
1648 | </P> |
---|
1649 | </BODY> |
---|
1650 | </HTML> |
---|