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Changeset 1804


Ignore:
Timestamp:
Apr 5, 2016 4:30:18 PM (9 years ago)
Author:
maronga
Message:

removed parameter file check. update of mrungui for compilation with qt5

Location:
palm/trunk
Files:
2 deleted
20 edited

Legend:

Unmodified
Added
Removed

  • palm/trunk/SCRIPTS/document_changes

    r1328 r1804  
    2020# Current revisions:
    2121# -----------------
    22 #
     22# Removed printing of "this is an alpha version"
    2323#
    2424# Former revisions:
    … …  
    7676    fi
    7777    printf "\n  *** Checking files in $input_dir\n"
    78     printf "\n  +++ THIS IS AN ALPHA VERSION. PLEASE CHECK THE MODIFIED FILES BEFORE COMMITTING\n"
    7978
    8079    for filename in $input_dir/*; do
    … …  
    186185       printf "\n  *** $count_files documents checked.\n"
    187186       printf "  *** $count_changes changed documents found.\n"
    188        printf "  *** You can now perform svn commit -m 'last commit documented' trunk\n"
    189        printf "\n  +++ THIS IS AN ALPHA VERSION. PLEASE CHECK THE MODIFIED FILES BEFORE COMMITTING\n"
     187       printf "\n"
     188       printf "  *** All files in $input_dir were checked.\n"     
     189       printf "  *** You can now proceed with checking other directories\n"
     190       printf "      - or you might want to perform svn commit -m 'last commit documented' trunk\n"
     191       printf "\n"     
     192       printf "  *** Please do not forget to commit your changes in the changelog \n under https://palm.muk.uni-hannover.de/trac/wiki/doc/tec/changelog !"     
    190193    else
    191194       printf "\n  *** $count_files documents checked.\n"

  • palm/trunk/SCRIPTS/mbuild

    r1653 r1804  
    2222# Current revisions:
    2323# ------------------
    24 #
     24# Removed parameter file check
    2525#
    2626# Former revisions:
    … …  
    14481448                echo "  +++ no qmake found. The (optional) GUI will not be compiled."
    14491449             fi
    1450 
    1451 #                 # COMPILE CHECK_NAMELIST_FILES (ONLY FOR ONE BRANCH on LOCALHOST NEEDED)
    1452 #              printf "\n\n"
    1453 #              echo "  *** compiling check_namelist_files ..."
    1454 #
    1455 #                 # GET CHECK OPTIONS
    1456 #              line=""
    1457 #              found=false
    1458 #              grep  "$remote_host_string" $config_file | grep "%cpp_options"  >  $tmp_mbuild
    1459 #              while read line1
    1460 #              do
    1461 #
    1462 #                 if [[ $(echo $line1 | cut -d" " -s -f3-) = "$remote_host_string" ]]
    1463 #                 then
    1464 #                    line="$line1"
    1465 #                 fi
    1466 #
    1467 #                 if [[ "$line" != ""  &&  $(echo $line | cut -c1) != "#" ]]
    1468 #                 then
    1469 #                       # REMOVE COLONS FROM THE OPTION-STRING, IF THERE ARE ANY
    1470 #                    line="$line "
    1471 #                    copts_check=`echo $line | cut -d" " -s -f2 | sed 's/::/%DUM%/g' | sed 's/:/ /g' | sed 's/%DUM%/:/g' | sed 's/-D[^ ]* //g' | sed 's/ -D.*//g'`
    1472 #                    found=true
    1473 #                 fi
    1474 #
    1475 #              done < $tmp_mbuild
    1476 #              copts_check="$copts_check -D__check -D__parallel"
    1477 #
    1478 #              check_depository_path=${local_source_path}/../UTIL
    1479 #              cd $check_depository_path
    1480 #              mkdir check_tmp
    1481 #              cp ${local_source_path}/${mainprog}_sources_check.tar ./check_tmp
    1482 #              cd check_tmp
    1483 #              tar -xf  ${mainprog}_sources_check.tar
    1484 #              rm -rf ${mainprog}_sources_check.tar
    1485 #              make  -f Makefile_check $make_options  F90=$compiler_name_ser  COPT="$copts_check"  F90FLAGS="$compiler_options"
    1486 #              tar -cf  check_namelist_files.tar Makefile_check check_namelist_files.x *.f90 *.o *.mod
    1487 #              mv check_namelist_files.tar $check_depository_path
    1488 #              mv check_namelist_files.x $PALM_BIN
    1489 #              cd $check_depository_path
    1490 #              rm -rf check_tmp
    1491 #              util_compiled_localhost=true
    14921450          else
    14931451             cd $check_depository_path
    14941452             printf "\n\n"
    1495              echo "  *** skipped compilation of mrun GUI."       
    1496              printf "\n\n"
    1497              echo "  *** skipped compilation of check_namelist_files (currently not available)."           
     1453             echo "  *** skipped compilation of mrun GUI."           
    14981454          fi
    14991455

  • palm/trunk/SCRIPTS/mrun

    r1779 r1804  
    2626# ROPTS removed from execution commands
    2727# Warnings about missing optional files or user code changed to informative messages
     28# Removed parameter file check
    2829#
    2930# Former revisions:
    … …  
    478479 then
    479480   (printf "\n  *** mrun can be called as follows:\n"
    480     printf "\n      $mrun_script_name  -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -y -Y.. -z -Z <modus> \n"
     481    printf "\n      $mrun_script_name  -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -y -Y.. -Z <modus> \n"
    481482    printf "\n      Description of available options:\n"
    482483    printf "\n      Option  Description                              Default-Value"
    … …  
    522523    printf "\n        -Y    run coupled model, \"#1 #2\" with"
    523524    printf "\n              #1 atmosphere and #2 ocean processors    \"#/2 #/2\" depending on -X"
    524     printf "\n        -z    disable a priori parameter file check    ---"
    525525    printf "\n        -Z    skip combine_plot_fields at the end of      "
    526526    printf "\n              the simulation                           ---"
    … …  
    12081208    fi
    12091209    eval pathname=${pathin[$i]}
    1210 
    1211        # SAVE INPUT FILE NAME FOR PARAMETER FILE CHECK
    1212     if [[ ("${transin[$i]}" = job) && (-f $filename) ]]
    1213     then
    1214        filename_input=$filename
    1215     fi
    12161210
    12171211       # CHECK IF FILE EXISTS
    … …  
    22072201 fi
    22082202
    2209 
    2210     # PERFORM PARAMETER FILE CHECK (COUPLED RUNS ARE NOT SUPPORTED YET)
    2211     # DEFINE VARIABLES FOR FREQUENTLY USED DIRECTORIES
    2212  check_depository="${working_directory}/trunk/UTIL"
    2213  check_sources="${working_directory}/tmp_check_namelist_files"
    2214  skip_check=false
    2215 
    2216     # CHECK IF NAMELIST_FILE_CHECK HAS BEEN COMPILED SUCCESSFULLY
    2217  if [[ ! -f $check_depository/check_namelist_files.tar ]]
    2218  then
    2219     skip_check=true
    2220     reason="run on remote host or parameter file check has not been compiled."
    2221  fi
    2222  if [[ ! -f $PALM_BIN/check_namelist_files.x ]]
    2223  then
    2224     skip_check=true
    2225     reason="parameter file check has not been compiled."
    2226  fi
    2227 
    2228     # CHECK FOR PARALLEL RUN; OTHERWISE SKIP CHECK
    2229  if [[ "$cond1" != "parallel"  &&  "$cond2" != "parallel" ]]
    2230  then
    2231     skip_check=true
    2232     reason="serial run."
    2233  fi
    2234 
    2235     # ONLY PERFORM CHECK IF -z OPTION IS NOT SET, NO RESTART RUN IS CARRIED OUT
    2236     # AND IF THE EXECUTION HOST IS THE LOCAL HOST
    2237     # ATTENTION: THIS ROUTINE DOES NOT WORK IF THE COMPILER ON THE LOCAL HOST
    2238     # DIFFERS FROM THE COMPILER ON THE REMOTE HOST
    2239  if [[ $check_namelist_files == false ]]
    2240  then
    2241     skip_check=true
    2242     reason="-z option set."
    2243  fi
    2244 
    2245  if [[ $fromhost != $localhost ]]
    2246  then
    2247     skip_check=true
    2248     reason="submitting host is local host." 
    2249  fi 
    2250 
    2251  if [[ $run_coupled_model == true ]]
    2252  then
    2253     skip_check=true
    2254     reason="coupled run." 
    2255  fi
    2256 
    2257  if [[ $restart_run == true ]]
    2258  then
    2259     skip_check=true
    2260     reason="restart run."     
    2261  fi
    2262 
    2263     # SKIP CHECK IN CASE OF RESTART RUN: CHECK WHETHER THE LAST CHAR IS "f" IN PARIN
    2264  (( last_char_int = `echo $filename_input | wc -c` - 1 ))
    2265  last_char=`echo $filename_input | cut -c $last_char_int`
    2266  if [[ "$last_char" == "f" ]]
    2267  then
    2268     skip_check=true
    2269     reason="restart run."
    2270  fi
    2271 
    2272  if [[ $skip_check == false ]]
    2273  then
    2274     tmp_check=${working_directory}/tmp_check
    2275 
    2276        # GET TOPOGRAPHY PARAMETER FILE SUFFIX (USUALLY "_TOPO"). THIS FILE IS
    2277        # NOT NECESSARILY REQUIRED
    2278     line=""
    2279     found=false
    2280     grep  "TOPOGRAPHY_DATA" $config_file  >  $tmp_check
    2281     while read line1
    2282     do
    2283        line="$line1"
    2284        if [[ "$line" != ""  &&  $(echo $line | cut -c1) != "#" ]]
    2285        then
    2286           topo_suffix=`echo $line | tr -s " " | cut -d" " -s -f5`
    2287           found=true
    2288        fi
    2289     done < $tmp_check
    2290 
    2291     if [[ $found = false ]]
    2292     then
    2293        printf "\n  +++ no TOPOGRAPHY list entry found in the configuration file."
    2294     fi
    2295 
    2296        # GET NUDGING PARAMETER FILE SUFFIX (USUALLY "_NUDGE"). THIS FILE IS
    2297        # NOT NECESSARILY REQUIRED
    2298     line=""
    2299     found=false
    2300     grep  "NUDGING_DATA" $config_file  >  $tmp_check
    2301     while read line1
    2302     do
    2303        line="$line1"
    2304        if [[ "$line" != ""  &&  $(echo $line | cut -c1) != "#" ]]
    2305        then
    2306           nudge_suffix=`echo $line | tr -s " " | cut -d" " -s -f5`
    2307           found=true
    2308        fi
    2309     done < $tmp_check
    2310 
    2311     if [[ $found = false ]]
    2312     then
    2313        printf "\n  +++ no NUDGING list entry found in the configuration file."
    2314     fi
    2315 
    2316        # GET LARGE SCALE FORCING PARAMETER FILE SUFFIX (USUALLY "_LSF"). THIS FILE IS
    2317        # NOT NECESSARILY REQUIRED
    2318     line=""
    2319     found=false
    2320     grep  "LSF_DATA" $config_file  >  $tmp_check
    2321     while read line1
    2322     do
    2323        line="$line1"
    2324        if [[ "$line" != ""  &&  $(echo $line | cut -c1) != "#" ]]
    2325        then
    2326           lsf_suffix=`echo $line | tr -s " " | cut -d" " -s -f5`
    2327           found=true
    2328        fi
    2329     done < $tmp_check
    2330 
    2331     if [[ $found = false ]]
    2332     then
    2333        printf "\n  +++ no LSF list entry found in the configuration file."
    2334     fi
    2335 
    2336     rm -rf ${working_directory}/tmp_check
    2337 
    2338        # CHECK IF THE P3DF FILE MUST BE CHECKED
    2339     for  item  in  $input_list
    2340     do
    2341        if [[ "$item" == "restart" ]]
    2342        then
    2343           check_restart=1
    2344        else
    2345           check_restart=0
    2346        fi
    2347     done
    2348 
    2349       # ERROR IF NO PARAMETER FILE WAS FOUND, OTHERWISE PROCEED
    2350     if [[ (! -f $filename_input) && ( "$filename_input" != "" ) ]]
    2351     then
    2352        printf "\n\n  +++ ERROR: parameter file ($filename_input) not found."
    2353        locat=check_namelist; exit
    2354     fi
    2355    
    2356        # CHECK IF THE RESTART PARAMETER FILE EXISTS (IF NECESSARY)
    2357     if  [[ $check_restart == 1 ]]
    2358     then
    2359 
    2360        filenamef="${filename_input}f"
    2361        if [[ ! -f $filenamef ]]
    2362        then
    2363           printf "\n\n  +++ WARNING: restart parameter file ($filenamef) is missing." 
    2364           check_restart=0
    2365           answer=dummy
    2366           printf "\n\n"
    2367 
    2368           if [[ $silent == false ]]
    2369           then
    2370              while [[ "$answer" != c  &&  "$answer" != C  && "$answer" != a  &&  "$answer" != A ]]
    2371              do
    2372                 printf " >>> continue anyway (c(ontinue)/a(bort)) ?  "
    2373                 read  answer
    2374              done
    2375              if [[ $answer = a  ||  $answer = A ]]
    2376              then
    2377                 printf "\n  +++ Aborting...."
    2378                 locat=normal; exit
    2379              fi
    2380           fi
    2381        else
    2382           check_restart=1
    2383        fi
    2384     fi
    2385 
    2386        # CREATE TEMPORARY SOURCES_FOR_CHECK PATH
    2387     mkdir $check_sources
    2388     cd $check_sources
    2389 
    2390 
    2391        # CHECK FOR USER CODE, OTHERWISE USE THE PRECOMPILED CHECK_NAMELIST_FILES.X
    2392     if [[ -d $add_source_path ]]
    2393     then
    2394        printf "\n\n  *** copying files from $check_depository"
    2395        cp $check_depository/check_namelist_files.tar ./
    2396 
    2397        printf "\n\n  *** untar of makefile and source files in $check_sources"
    2398        tar -xf check_namelist_files.tar  >  /dev/null  2>&1
    2399 
    2400        printf "\n\n  *** adding user code."
    2401        cp $add_source_path/* ./
    2402        touch check_namelist_files.f90
    2403 
    2404           # GET COMPILER OPTIONS AND PERFORM MAKE
    2405        printf "\n\n  *** compiling code if necessary...\n"
    2406 
    2407           # workaround for batch jobs on local machine (lcxe6)
    2408        if [[ $do_batch == true && $do_remote == false ]]
    2409        then
    2410           eval $init_cmds
    2411        fi
    2412 
    2413           # GET CHECK OPTIONS
    2414        line=""
    2415        found=false
    2416 
    2417        grep  "$localhost" ${base_directory}/${config_file} | grep "%cpp_options"  >  $tmp_check
    2418 
    2419        while read line1
    2420        do
    2421 
    2422           if [[ $(echo $line1 | cut -d" " -s -f3-) = "$localhost" ]]
    2423           then
    2424              line="$line1"
    2425           fi
    2426 
    2427           if [[ "$line" != ""  &&  $(echo $line | cut -c1) != "#" ]]
    2428           then
    2429                 # REMOVE COLONS FROM OPTION-STRING, REMOVE ALL -D OPTIONS
    2430              line="$line "
    2431              copts_check=`echo $line | cut -d" " -s -f2 | sed 's/::/%DUM%/g' | sed 's/:/ /g' | sed 's/%DUM%/:/g' | sed 's/-D[^ ]* //g' | sed 's/ -D.*//g'`
    2432              found=true
    2433           fi
    2434 
    2435        done < $tmp_check
    2436        copts_check="$copts_check -D__check -D__parallel"
    2437 
    2438        make -f Makefile_check F90=$compiler_name_ser  COPT="$copts_check"
    2439 
    2440           # GET MAKE OUTPUT
    2441        if [[ $? != 0 ]]
    2442        then
    2443           printf "\n  +++ error during make."       
    2444           answer=dummy
    2445           printf "\n\n"
    2446           if [[ $silent == false ]]
    2447           then
    2448              while [[ "$answer" != c  &&  "$answer" != C  && "$answer" != a  &&  "$answer" != A ]]
    2449              do
    2450                 printf " >>> continue anyway (c(ontinue)/a(bort)) ?  "
    2451                 read  answer
    2452              done
    2453              if [[ $answer = a  ||  $answer = A ]]
    2454              then
    2455                 printf "\n  +++ Aborting..."
    2456                 rm -rf  $check_sources
    2457                 locat=normal; exit
    2458              else
    2459                 skip_check=true
    2460              fi
    2461           else
    2462              skip_check=true
    2463           fi
    2464        fi
    2465     else
    2466        cp $PALM_BIN/check_namelist_files.x ./
    2467     fi
    2468 
    2469     cp $filename_input ./PARIN
    2470     if [[ $check_restart == 1 ]]
    2471     then
    2472        cp $filenamef ./PARINF   
    2473     fi
    2474 
    2475     if [[ -f ${pathname}/${fname}${topo_suffix} && $skip_check == false ]]
    2476     then
    2477        printf "\n  *** adding topography data"
    2478        cp ${pathname}/${fname}${topo_suffix} ./TOPOGRAPHY_DATA
    2479 
    2480           # IN CASE OF TOPOGRAPHY AND HIGH GRID POINT NUMBERS, THE STACK SIZE
    2481           # MUST BE INCREASED. THIS IS DUE TO THE ARRAY nzb_local AND topo_height,
    2482           # WHICH REQUIRE SUFFICIENT MEMORY
    2483        ulimit -s unlimited         
    2484     fi
    2485 
    2486     if [[ -f ${pathname}/${fname}${nudge_suffix} && $skip_check == false ]]
    2487     then
    2488        printf "\n  *** adding nudging data"
    2489        cp ${pathname}/${fname}${nudge_suffix} ./NUDGING_DATA       
    2490     fi
    2491 
    2492     if [[ -f ${pathname}/${fname}${lsf_suffix} && $skip_check == false ]]
    2493     then
    2494        printf "\n  *** adding large scale forcing data"
    2495        cp ${pathname}/${fname}${lsf_suffix} ./LSF_DATA       
    2496     fi
    2497 
    2498        # CREATE ENVPAR FILE, WHICH IS NEEDED BY CHECK_NAMELIST_FILES.X
    2499     cat  >  ENVPAR  <<  %%END%%
    2500  &envpar  run_identifier = '$fname', host = '$host',
    2501             write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
    2502             maximum_parallel_io_streams = $maximum_parallel_io_streams,
    2503             maximum_cpu_time_allowed = ${cpumax}.,
    2504             revision = '$global_revision',
    2505             local_dvrserver_running = $local_dvrserver_running /
    2506 
    2507 %%END%%
    2508 
    2509        # SAFETY CHECK: ONLY PROCEED IF THE PARAMETER CHECK PROGRAM WAS PROPERLY COMPILED
    2510     if [[ ! -f check_namelist_files.x  &&  $skip_check == false ]]
    2511     then
    2512        printf "\n  +++ WARNING: check_namelist_files.x not found."
    2513        answer=dummy
    2514        printf "\n\n"
    2515 
    2516        if [[ $silent == false ]]
    2517        then
    2518           while [[ "$answer" != c  &&  "$answer" != C  && "$answer" != a  &&  "$answer" != A ]]
    2519           do
    2520              printf " >>> continue anyway (c(ontinue)/a(bort)) ?  "
    2521              read  answer
    2522           done
    2523           if [[ $answer = a  ||  $answer = A ]]
    2524           then
    2525              printf "\n  +++ Aborting..."
    2526              rm -rf  $check_sources
    2527              locat=normal; exit
    2528           else
    2529              printf "\n  *** skipping parameter file check."         
    2530           fi
    2531       fi
    2532        
    2533     elif [[ $skip_check == false ]]
    2534     then
    2535           # STARTING THE PARAMETER FILE CHECK
    2536        printf "\n\n  *** starting parameter file check..."
    2537 
    2538           # CHECKING THE P3D FILE
    2539        printf "\n\n      (1) checking $filename_input" 
    2540        echo "$numprocs 0 0" > VARIN
    2541        errors=`./check_namelist_files.x < VARIN 2>&1`
    2542 
    2543        check_error=false
    2544        if [[ "$errors" == "" ]]
    2545        then
    2546           printf " --> o.k."
    2547        else
    2548           printf " --> failed."
    2549           check_error=true
    2550           printf "\n\n  $errors"
    2551        fi
    2552 
    2553           # CHECKING THE PD3F FILE IF NECESSARY
    2554        if [[ $check_restart == 1 && $check_error == false ]]
    2555        then
    2556           printf "\n\n      (2) checking $filenamef" 
    2557 
    2558              # FIRST CHECK IF INITIALIZING_ACTIONS="READ_RESTART_DATA" IS SET
    2559              # IN &INIPAR LIST
    2560           found=false
    2561           cat PARINF | while read line
    2562           do
    2563              line=$(echo $line|sed 's/ //g')
    2564              if [[ $line == *"&inipar"* ]]
    2565              then
    2566                 start_search=true
    2567              fi
    2568 
    2569              if [[ $start_search == true ]]
    2570              then
    2571                 if [[ $line == *"initializing_actions='read_restart_data'"* ]]
    2572                 then
    2573                    found=true
    2574                    break
    2575                 fi
    2576              fi
    2577 
    2578              if [[ $line == *"/"* ]]
    2579              then
    2580                 start_search=false
    2581              fi
    2582 
    2583           done
    2584 
    2585           if [[ $found = false ]]
    2586           then
    2587              printf "\n\n  +++ ERROR: initializing_actions = 'read_restart_data' not found"
    2588              printf "\n      in &inipar list in $fname$p3df_suffix."
    2589              rm -rf  $check_sources
    2590              locat=check_namelist; exit
    2591           fi
    2592 
    2593              # READ max_user_pr FROM FILES
    2594           if [[ -f parin_for_check ]]
    2595           then
    2596              read max_pr_user < parin_for_check
    2597           else
    2598              max_user_pr=0
    2599           fi
    2600 
    2601           echo "$numprocs 1 $max_pr_user" > VARIN
    2602           errors=`./check_namelist_files.x < VARIN 2>&1`
    2603 
    2604           if [[ "$errors" == "" ]]
    2605           then
    2606              printf " --> o.k."
    2607           else
    2608              printf " --> failed."
    2609              check_error=true
    2610              printf "\n\n  $errors"
    2611           fi
    2612        fi
    2613    
    2614           # REPORT ERRORS AND CONTINUE/EXIT
    2615        if [[ $check_error == true ]]
    2616        then
    2617           printf "\n  +++ errors found in the parameter file!\n"
    2618           answer=dummy
    2619           printf "\n\n"
    2620 
    2621           while [[ "$answer" != c  &&  "$answer" != C  && "$answer" != a  &&  "$answer" != A ]]
    2622           do
    2623              printf " >>> continue anyway (c(ontinue)/a(bort)) ?  "
    2624              read  answer
    2625           done
    2626 
    2627           if [[ $answer = a  ||  $answer = A ]]
    2628           then
    2629              printf "\n  +++ Aborting..."
    2630              rm -rf  $check_sources
    2631              locat=normal; exit
    2632           fi
    2633         else
    2634           printf "\n\n  *** parameter file(s) seem(s) to be o.k.\n"
    2635         fi
    2636         rm -rf $check_sources
    2637     fi
    2638  else
    2639     printf "\n\n  +++ skipping parameter file check due to following reason: $reason \n"
    2640  fi
    2641 
    2642     # DELETE TEMPORARY DIRECTORY AND FINISH NAMELIST FILE CHECK   
    2643  rm -rf  $check_sources
    2644  cd $working_directory
    2645 
     2203 
    26462204    # DETERMINE PATH FOR MAKE DEPOSITORY
    26472205 if [[ $do_batch = false  ||  $create_executable_for_batch = true ]]

  • palm/trunk/SOURCE/check_open.f90

    r1784 r1804  
    1111! A PARTICULAR PURPOSE.  See the GNU General Public License for more details.
    1212!
    13 ! You should have received a copy of the GNU General Public License along with
     13! You should have received a copy of the GNU fGeneral Public License along with
    1414! PALM. If not, see <http://www.gnu.org/licenses/>.
    1515!
    … …  
    1919! Current revisions:
    2020! -----------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    208208    IF ( openfile(file_id)%opened )  RETURN
    209209
    210 #if ! defined ( __check )
    211210!
    212211!-- Only certain files are allowed to be re-opened
    … …  
    231230       END SELECT
    232231    ENDIF
    233 #endif
    234232
    235233!
    … …  
    283281       CASE ( 11 )
    284282
    285 #if defined ( __check )
    286 !
    287 !--       In case of a prior parameter file check, the p3d data is stored in
    288 !--       PARIN, while the p3df is stored in PARINF. This only applies to
    289 !--       check_namelist_files!
    290           IF ( check_restart == 2 ) THEN
    291              OPEN ( 11, FILE='PARINF'//TRIM( coupling_char ),                  &
    292                         FORM='FORMATTED', STATUS='OLD' )
    293           ELSE
    294              OPEN ( 11, FILE='PARIN'//TRIM( coupling_char ), FORM='FORMATTED', &
    295                         STATUS='OLD' )
    296           END IF
    297 #else
    298 
    299283          OPEN ( 11, FILE='PARIN'//TRIM( coupling_char ), FORM='FORMATTED',    &
    300284                     STATUS='OLD' )
    301 #endif
    302285
    303286       CASE ( 13 )
    … …  
    328311                CALL local_system( 'mkdir  BINOUT' // TRIM( coupling_char ) )
    329312             ENDIF
    330 #if defined( __parallel ) && ! defined ( __check )
     313#if defined( __parallel )
    331314!
    332315!--          Set a barrier in order to allow that all other processors in the
    … …  
    371354                        FORM='UNFORMATTED', POSITION='APPEND' )
    372355          ELSE
    373 #if defined( __parallel ) && ! defined ( __check )
     356#if defined( __parallel )
    374357!
    375358!--          Set a barrier in order to allow that all other processors in the
    … …  
    563546                                   TRIM( coupling_char ) )
    564547             ENDIF
    565 #if defined( __parallel ) && ! defined ( __check )
     548#if defined( __parallel )
    566549!
    567550!--          Set a barrier in order to allow that thereafter all other
    … …  
    615598                                   TRIM( coupling_char ) )
    616599             ENDIF
    617 #if defined( __parallel ) && ! defined ( __check )
     600#if defined( __parallel )
    618601!
    619602!--          Set a barrier in order to allow that thereafter all other
    … …  
    673656                CALL netcdf_handle_error( 'check_open', 21 )
    674657                IF ( myid == 0 )  CALL local_system( 'rm ' // TRIM( filename ) )
    675 #if defined( __parallel ) && ! defined ( __check )
     658#if defined( __parallel )
    676659!
    677660!--             Set a barrier in order to assure that PE0 deleted the old file
    … …  
    735718                CALL netcdf_handle_error( 'check_open', 24 )
    736719                IF ( myid == 0 )  CALL local_system( 'rm ' // TRIM( filename ) )
    737 #if defined( __parallel ) && ! defined ( __check )
     720#if defined( __parallel )
    738721!
    739722!--             Set a barrier in order to assure that PE0 deleted the old file
    … …  
    797780                CALL netcdf_handle_error( 'check_open', 27 )
    798781                IF ( myid == 0 )  CALL local_system( 'rm ' // TRIM( filename ) )
    799 #if defined( __parallel ) && ! defined ( __check )
     782#if defined( __parallel )
    800783!
    801784!--             Set a barrier in order to assure that PE0 deleted the old file
    … …  
    940923                CALL netcdf_handle_error( 'check_open', 36 )
    941924                IF ( myid == 0 )  CALL local_system( 'rm ' // TRIM( filename ) )
    942 #if defined( __parallel ) && ! defined ( __check )
     925#if defined( __parallel )
    943926!
    944927!--             Set a barrier in order to assure that PE0 deleted the old file
    … …  
    10571040                                       TRIM( coupling_char ) // '/' )
    10581041                ENDIF
    1059 #if defined( __parallel ) && ! defined ( __check )
     1042#if defined( __parallel )
    10601043!
    10611044!--             Set a barrier in order to allow that all other processors in the

  • palm/trunk/SOURCE/check_parameters.f90

    r1796 r1804  
    1919! Current revisions:
    2020! -----------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    425425
    426426
    427 #if ! defined( __check )
    428427       IF ( myid == 0 ) THEN
    429428          CALL MPI_SEND( dt_coupling, 1, MPI_REAL, target_id, 11, comm_inter,  &
    … …  
    433432       ENDIF
    434433       CALL MPI_BCAST( remote, 1, MPI_REAL, 0, comm2d, ierr)
    435 #endif     
     434
    436435       IF ( dt_coupling /= remote )  THEN
    437436          WRITE( message_string, * ) 'coupling mode "', TRIM( coupling_mode ), &
    … …  
    441440       ENDIF
    442441       IF ( dt_coupling <= 0.0_wp )  THEN
    443 #if ! defined( __check )
     442
    444443          IF ( myid == 0  ) THEN
    445444             CALL MPI_SEND( dt_max, 1, MPI_REAL, target_id, 19, comm_inter, ierr )
    … …  
    448447          ENDIF   
    449448          CALL MPI_BCAST( remote, 1, MPI_REAL, 0, comm2d, ierr)
    450 #endif         
     449     
    451450          dt_coupling = MAX( dt_max, remote )
    452451          WRITE( message_string, * ) 'coupling mode "', TRIM( coupling_mode ), &
    … …  
    455454          CALL message( 'check_parameters', 'PA0005', 0, 1, 0, 6, 0 )
    456455       ENDIF
    457 #if ! defined( __check )
     456
    458457       IF ( myid == 0 ) THEN
    459458          CALL MPI_SEND( restart_time, 1, MPI_REAL, target_id, 12, comm_inter, &
    … …  
    463462       ENDIF
    464463       CALL MPI_BCAST( remote, 1, MPI_REAL, 0, comm2d, ierr)
    465 #endif     
     464 
    466465       IF ( restart_time /= remote )  THEN
    467466          WRITE( message_string, * ) 'coupling mode "', TRIM( coupling_mode ), &
    … …  
    470469          CALL message( 'check_parameters', 'PA0006', 1, 2, 0, 6, 0 )
    471470       ENDIF
    472 #if ! defined( __check )
     471
    473472       IF ( myid == 0 ) THEN
    474473          CALL MPI_SEND( dt_restart, 1, MPI_REAL, target_id, 13, comm_inter,   &
    … …  
    478477       ENDIF   
    479478       CALL MPI_BCAST( remote, 1, MPI_REAL, 0, comm2d, ierr)
    480 #endif     
     479   
    481480       IF ( dt_restart /= remote )  THEN
    482481          WRITE( message_string, * ) 'coupling mode "', TRIM( coupling_mode ), &
    … …  
    487486
    488487       simulation_time_since_reference = end_time - coupling_start_time
    489 #if ! defined( __check )
     488
    490489       IF  ( myid == 0 ) THEN
    491490          CALL MPI_SEND( simulation_time_since_reference, 1, MPI_REAL, target_id, &
    … …  
    495494       ENDIF
    496495       CALL MPI_BCAST( remote, 1, MPI_REAL, 0, comm2d, ierr)
    497 #endif     
     496   
    498497       IF ( simulation_time_since_reference /= remote )  THEN
    499498          WRITE( message_string, * ) 'coupling mode "', TRIM( coupling_mode ), &
    … …  
    504503       ENDIF
    505504
    506 #if ! defined( __check )
    507505       IF ( myid == 0 ) THEN
    508506          CALL MPI_SEND( dx, 1, MPI_REAL, target_id, 15, comm_inter, ierr )
    … …  
    512510       CALL MPI_BCAST( remote, 1, MPI_REAL, 0, comm2d, ierr)
    513511
    514 #endif
     512
    515513       IF ( coupling_mode == 'atmosphere_to_ocean') THEN
    516514
    … …  
    531529       ENDIF
    532530
    533 #if ! defined( __check )
    534531       IF ( myid == 0) THEN
    535532          CALL MPI_SEND( dy, 1, MPI_REAL, target_id, 16, comm_inter, ierr )
    … …  
    538535       ENDIF
    539536       CALL MPI_BCAST( remote, 1, MPI_REAL, 0, comm2d, ierr)
    540 #endif
     537
    541538       IF ( coupling_mode == 'atmosphere_to_ocean') THEN
    542539
    … …  
    579576    ENDIF
    580577
    581 #if defined( __parallel ) && ! defined ( __check )
     578#if defined( __parallel )
    582579!
    583580!-- Exchange via intercommunicator
    … …  
    38563853!
    38573854!-- Check the NetCDF data format
    3858 #if ! defined ( __check )
    38593855    IF ( netcdf_data_format > 2 )  THEN
    38603856#if defined( __netcdf4 )
    … …  
    38793875#endif
    38803876    ENDIF
    3881 #endif
    38823877
    38833878!

  • palm/trunk/SOURCE/exchange_horiz.f90

    r1683 r1804  
    1919! Current revisions:
    2020! -----------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    102102                        nxl-nbgp_local:nxr+nbgp_local) ::  ar  !<
    103103                       
    104 
    105 #if ! defined( __check )
    106104
    107105    CALL cpu_log( log_point_s(2), 'exchange_horiz', 'start' )
    … …  
    290288    CALL cpu_log( log_point_s(2), 'exchange_horiz', 'stop' )
    291289
    292 #endif
    293290 END SUBROUTINE exchange_horiz
    294291
    … …  
    319316                        nxl-nbgp_local:nxr+nbgp_local) ::  ar  !< treated array
    320317
    321 #if ! defined( __check )
    322318
    323319#if defined( __parallel )
    … …  
    386382
    387383#endif
    388 #endif
    389384
    390385

  • palm/trunk/SOURCE/exchange_horiz_2d.f90

    r1763 r1804  
    1919! Current revisions:
    2020! -----------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    8686   
    8787
    88 #if ! defined( __check )
    8988    CALL cpu_log( log_point_s(13), 'exchange_horiz_2d', 'start' )
    9089
    … …  
    181180    CALL cpu_log( log_point_s(13), 'exchange_horiz_2d', 'stop' )
    182181
    183 #endif
    184182 END SUBROUTINE exchange_horiz_2d
    185183
    … …  
    215213    INTEGER(iwp) ::  ar(nysg:nyng,nxlg:nxrg)  !<
    216214
    217 #if ! defined( __check )
    218215    CALL cpu_log( log_point_s(13), 'exchange_horiz_2d', 'start' )
    219216
    … …  
    308305    CALL cpu_log( log_point_s(13), 'exchange_horiz_2d', 'stop' )
    309306
    310 #endif
    311307 END SUBROUTINE exchange_horiz_2d_int

  • palm/trunk/SOURCE/init_grid.f90

    r1780 r1804  
    1919! Current revisions:
    2020! -----------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    703703
    704704             ENDIF
    705 #if defined( __parallel ) && ! defined ( __check )
     705#if defined( __parallel )
    706706             CALL MPI_BARRIER( comm2d, ierr )
    707707#endif
    … …  
    925925          ENDIF
    926926       ENDDO
    927 #if ! defined ( __check )
     927
    928928!
    929929!--    Exchange of lateral boundary values (parallel computers) and cyclic
    … …  
    962962          ENDDO
    963963       ENDDO
    964 #endif
     964
    965965    ENDIF
    966966
    967 #if ! defined ( __check )
    968967!
    969968!-- Preliminary: to be removed after completion of the topography code!
    … …  
    17361735                nzb_tmp, vertical_influence, wall_l, wall_n, wall_r, wall_s )
    17371736
    1738 #endif
    17391737
    17401738 END SUBROUTINE init_grid

  • palm/trunk/SOURCE/init_masks.f90

    r1784 r1804  
    1919! Current revisions:
    2020! -----------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    444444!--    Set global masks along all three dimensions (required by
    445445!--    define_netcdf_header).
    446 #if defined( __parallel ) && ! defined ( __check )
     446#if defined( __parallel )
    447447!
    448448!--    PE0 receives partial arrays from all processors of the respective mask
    … …  
    536536       ENDIF
    537537
    538 #elif ! defined ( __parallel )
     538#else
    539539!
    540540!--    Local arrays can be relocated directly.

  • palm/trunk/SOURCE/init_pegrid.f90

    r1780 r1804  
    1919! Current revisions:
    2020! ------------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    267267
    268268
    269 #if ! defined( __check)
    270269!
    271270!-- Create the virtual processor grid
    … …  
    293292    CALL MPI_COMM_RANK( comm1dy, myidy, ierr )
    294293
    295 #endif
    296294
    297295!
    … …  
    489487
    490488
    491 #if ! defined( __check)
    492489!
    493490!-- Collect index bounds from other PEs (to be written to restart file later)
    … …  
    520517    ENDIF
    521518
    522 #endif
    523519
    524520#if defined( __print )
    … …  
    556552#endif
    557553
    558 #if defined( __parallel ) && ! defined( __check)
     554#if defined( __parallel )
    559555#if defined( __mpi2 )
    560556!
    … …  
    897893
    898894          IF ( i == mg_switch_to_pe0_level )  THEN
    899 #if defined( __parallel ) && ! defined( __check )
     895#if defined( __parallel )
    900896!
    901897!--          Save the grid size of the subdomain at the switch level, because
    … …  
    930926                              ( nzt_l - nzb + 2 )
    931927
    932 #elif ! defined ( __parallel )
     928#else
    933929             message_string = 'multigrid gather/scatter impossible ' // &
    934930                          'in non parallel mode'
    … …  
    972968    grid_level = 0
    973969
    974 #if defined( __parallel ) && ! defined ( __check )
     970#if defined( __parallel )
    975971!
    976972!-- Gridpoint number for the exchange of ghost points (y-line for 2D-arrays)
    … …  
    10681064#endif
    10691065
    1070 #if defined( __parallel ) && ! defined ( __check )
     1066#if defined( __parallel )
    10711067!
    10721068!-- Setting of flags for inflow/outflow/nesting conditions in case of non-cyclic
    … …  
    11381134    CALL location_message( 'finished', .TRUE. )
    11391135
    1140 #elif ! defined ( __parallel )
     1136#else
    11411137    IF ( bc_lr == 'dirichlet/radiation' )  THEN
    11421138       inflow_l  = .TRUE.

  • palm/trunk/SOURCE/local_stop.f90

    r1765 r1804  
    1919! Current revisions:
    2020! -----------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    6868        ONLY:  nested_run
    6969
    70 #if defined( __parallel ) && ! defined ( __check )
     70#if defined( __parallel )
    7171    IF ( coupling_mode == 'uncoupled' )  THEN
    7272       IF ( nested_run )  THEN

  • palm/trunk/SOURCE/modules.f90

    r1789 r1804  
    1919! Current revisions:
    2020! ------------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    687687                     subs_vertical_gradient_level_i(10) = -9999
    688688
    689 #if defined ( __check )
    690     INTEGER(iwp) :: check_restart = 0
    691 #endif
    692689
    693690    INTEGER(iwp), DIMENSION(0:1) :: ntdim_2d_xy, ntdim_2d_xz, ntdim_2d_yz, ntdim_3d
    … …  
    11761173    USE kinds
    11771174
    1178 #if defined( __parallel ) && ! defined ( __check )
     1175#if defined( __parallel )
    11791176#if defined( __lc )
    11801177    USE MPI
    … …  
    12111208
    12121209    INTEGER(iwp) ::  ibuf(12), pcoord(2)
    1213 
    1214 #if ! defined ( __check )
    12151210    INTEGER(iwp) ::  status(MPI_STATUS_SIZE)
    12161211    INTEGER(iwp), DIMENSION(MPI_STATUS_SIZE,100) ::  wait_stat
    1217 #endif
    12181212
    12191213    INTEGER(iwp) :: ngp_yz_int, type_xz_int, type_yz_int

  • palm/trunk/SOURCE/parin.f90

    r1784 r1804  
    1919! Current revisions:
    2020! -----------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    363363          READ ( 11, inipar, ERR=10, END=11 )
    364364
    365 #if defined ( __check )
    366 !
    367 !--       In case of a namelist file check, &inipar from the p3d file is
    368 !--       used. The p3d file here must be closed and the p3df file for reading
    369 !--       3dpar is opened.
    370           IF ( check_restart == 1 )  THEN
    371              CALL close_file( 11 )
    372              check_restart = 2
    373              CALL check_open( 11 )             
    374              initializing_actions = 'read_restart_data'
    375           ENDIF
    376 #endif
    377365          GOTO 12
    378366
    … …  
    389377!--       check_open)
    390378 12       IF ( TRIM( initializing_actions ) == 'read_restart_data' )  THEN
    391 #if ! defined ( __check )
    392379             CALL read_var_list
    393380!
    … …  
    398385!--          Increment the run count
    399386             runnr = runnr + 1
    400 #endif
    401387          ENDIF
    402388
    … …  
    510496
    511497       ENDIF
    512 #if defined( __parallel ) && ! ( __check )
     498#if defined( __parallel )
    513499       CALL MPI_BARRIER( MPI_COMM_WORLD, ierr )
    514500#endif

  • palm/trunk/SOURCE/poisfft.f90

    r1683 r1804  
    1919! Current revisions:
    2020! -----------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    150150    PRIVATE
    151151
    152 #if ! defined ( __check )
    153152    PUBLIC  poisfft, poisfft_init
    154153
    … …  
    160159       MODULE PROCEDURE poisfft_init
    161160    END INTERFACE poisfft_init
    162 #else
    163     PUBLIC  poisfft_init
    164 
    165     INTERFACE poisfft_init
    166        MODULE PROCEDURE poisfft_init
    167     END INTERFACE poisfft_init
    168 #endif
     161
    169162
    170163 CONTAINS
    … …  
    196189
    197190
    198 #if ! defined ( __check )
     191
    199192!------------------------------------------------------------------------------!
    200193! Description:
    … …  
    14991492    END SUBROUTINE ffty_tri_ffty
    15001493
    1501 #endif
    1502 
    15031494 END MODULE poisfft_mod

  • palm/trunk/SOURCE/tridia_solver.f90

    r1683 r1804  
    1919! Current revisions:
    2020! ------------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    130130!
    131131!--    Calculate constant coefficients of the tridiagonal matrix
    132 #if ! defined ( __check )
    133132       CALL maketri
    134133       CALL split
    135 #endif
    136134
    137135    END SUBROUTINE tridia_init

  • palm/trunk/SOURCE/user_statistics.f90

    r1784 r1804  
    1919! Current revisions:
    2020! -----------------
    21 !
     21! Removed code for parameter file check (__check)
    2222!
    2323! Former revisions:
    … …  
    140140!--           value on all PEs, you can omit the MPI_ALLREDUCE call and
    141141!--           assign ts_value(dots_num_palm+1:,sr) = ts_value_l directly.
    142 !#if defined( __parallel ) && ! defined ( __check )
     142!#if defined( __parallel )
    143143!       IF ( collective_wait )  CALL MPI_BARRIER( comm2d, ierr )
    144144!       CALL MPI_ALLREDUCE( ts_value_l(dots_num_palm+1),                         &

  • palm/trunk/UTIL/mrungui/main.cpp

    r1047 r1804  
    1818// Current revisions:
    1919// -----------------
     20// Update for use with qt5
    2021//
    2122// Former revisions:
    … …  
    3738//----------------------------------------------------------------------------//
    3839
    39 #include <QtGui/QApplication>
     40#include <QApplication>
    4041#include "mainwindow.h"
    4142#include <QProcess>

  • palm/trunk/UTIL/mrungui/mainwindow.cpp

    r1724 r1804  
    1818// Current revisions:
    1919// -----------------
    20 //
     20// Removed parameter file check
     21// Update for use with qt5
    2122//
    2223// Former revisions:
    … …  
    5354//----------------------------------------------------------------------------//
    5455
    55 #include <QtGui/QApplication>
     56#include <QApplication>
    5657#include "mainwindow.h"
    5758#include "ui_mainwindow.h"
    … …  
    230231    ui->check_advanced->setEnabled(false);
    231232    ui->check_verbose->setEnabled(false);
    232     ui->check_namelist_check->setEnabled(false);
    233233    ui->button_start->setEnabled(false);
    234234    ui->button_start->setText("wait...");
    … …  
    287287    ui->check_advanced->setEnabled(true);
    288288    ui->check_verbose->setEnabled(true);
    289     ui->check_namelist_check->setEnabled(true);
    290289    ui->button_start->setEnabled(true);
    291290    ui->action_save->setEnabled(true);
    … …  
    10341033    }
    10351034
    1036     status = ui->check_namelist_check->checkState();
    1037 
    1038     if (status == 2)
    1039     {
    1040         activate_flag("z");
    1041     }
    1042     else
    1043     {
    1044         deactivate_flag("z");
    1045     }
    1046 
    10471035    status = ui->check_A->checkState();
    10481036
    … …  
    12891277int MainWindow::start_watchdog()
    12901278{
    1291     system("nohup palm_wd >> /dev/null 2>&1 &");
    1292 
    1293     return 0;
     1279    return system("nohup palm_wd >> /dev/null 2>&1 &");
     1280
    12941281}
    12951282
    … …  
    14891476            {
    14901477               ui->check_verbose->setChecked(true);
    1491             }
    1492             else if ( parameter == "z")
    1493             {
    1494                ui->check_namelist_check->setChecked(true);
    14951478            }
    14961479            else if ( parameter == "A")

  • palm/trunk/UTIL/mrungui/mainwindow.ui

    r1723 r1804  
    808808     </property>
    809809    </widget>
    810     <widget class="QCheckBox" name="check_namelist_check">
     810    <widget class="QCheckBox" name="check_cycfill">
    811811     <property name="geometry">
    812812      <rect>
    … …  
    814814       <y>245</y>
    815815       <width>261</width>
    816        <height>23</height>
    817       </rect>
    818      </property>
    819      <property name="text">
    820       <string>Skip namelist file check</string>
    821      </property>
    822     </widget>
    823     <widget class="QCheckBox" name="check_cycfill">
    824      <property name="geometry">
    825       <rect>
    826        <x>270</x>
    827        <y>197</y>
    828        <width>191</width>
    829816       <height>21</height>
    830817      </rect>
    … …  
    13661353     <y>0</y>
    13671354     <width>917</width>
    1368      <height>18</height>
     1355     <height>20</height>
    13691356    </rect>
    13701357   </property>
    … …  
    13741361      <x>2175</x>
    13751362      <y>98</y>
    1376       <width>120</width>
    1377       <height>206</height>
     1363      <width>159</width>
     1364      <height>186</height>
    13781365     </rect>
    13791366    </property>
    … …  
    24422429  </connection>
    24432430  <connection>
    2444    <sender>check_namelist_check</sender>
    2445    <signal>stateChanged(int)</signal>
    2446    <receiver>MainWindow</receiver>
    2447    <slot>check_flags()</slot>
    2448    <hints>
    2449     <hint type="sourcelabel">
    2450      <x>61</x>
    2451      <y>609</y>
    2452     </hint>
    2453     <hint type="destinationlabel">
    2454      <x>5</x>
    2455      <y>594</y>
    2456     </hint>
    2457    </hints>
    2458   </connection>
    2459   <connection>
    24602431   <sender>check_Z</sender>
    24612432   <signal>stateChanged(int)</signal>

  • palm/trunk/UTIL/mrungui/mrungui.pro

    r794 r1804  
    33# Current revisions:
    44# -----------------
    5 #
     5# Update for use with qt5
     6#
    67# Former revisions:
    78# -----------------
    … …  
    1819QT       += core gui
    1920
     21greaterThan(QT_MAJOR_VERSION, 4): QT += widgets
     22
    2023TARGET = mrungui.x
    2124DESTDIR = ../../SCRIPTS/
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