Changeset 1308 for palm/trunk/SCRIPTS

Timestamp:

Mar 13, 2014 2:58:42 PM (10 years ago)

Author:

fricke

Message:

Adjustments for parallel NetCDF output for lccrayh/lccrayb (Cray XC30 systems)

File:

• palm/trunk/SCRIPTS/.mrun.config.hlrnIII (modified) (3 diffs)

palm/trunk/SCRIPTS/.mrun.config.hlrnIII

@@ -37 +37 @@
 %compiler_name       ftn                         lccrayb parallel
 %compiler_name_ser   ftn                         lccrayb parallel
-%cpp_options         -e:Z:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__fftw   lccrayb parallel
+%cpp_options         -e:Z:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__netcdf4_parallel:-D__fftw   lccrayb parallel
 %mopts               -j:4                        lccrayb parallel
 %fopts               -em:-s:real64:-O3:-hnoomp:-hfp3:-hdynamic          lccrayb parallel
 %lopts               -em:-s:real64:-O3:-hnoomp:-hfp3:-hdynamic:-dynamic lccrayb parallel
-%remote_username     <replace by your HLRN-III username>                    lccrayb parallel
-%memory              1500                        lccrayb parallel
-%modules             fftw:cray-netcdf            lccrayb parallel
+%remote_username     <replace by your HLRN-III username>                lccrayb parallel
+%memory              1500                                               lccrayb parallel
+%modules             fftw:cray-hdf5-parallel:cray-netcdf-hdf5parallel   lccrayb parallel
 #
 # HLRN-III Hannover
@@ -50 +50 @@
 %compiler_name       ftn                         lccrayh parallel
 %compiler_name_ser   ftn                         lccrayh parallel
-%cpp_options         -e:Z:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__fftw   lccrayh parallel
+%cpp_options         -e:Z:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__netcdf4_parallel:-D__fftw   lccrayh parallel
 %mopts               -j:4                        lccrayh parallel
 %fopts               -em:-s:real64:-O3:-hnoomp:-hfp3:-hdynamic          lccrayh parallel
 %lopts               -em:-s:real64:-O3:-hnoomp:-hfp3:-hdynamic:-dynamic lccrayh parallel
-%remote_username     <replace by your HLRN-III username>                    lccrayh parallel
-%memory              1500                        lccrayh parallel
-%modules             fftw:cray-netcdf            lccrayh parallel
+%remote_username     <replace by your HLRN-III username>                lccrayh parallel
+%memory              1500                                               lccrayh parallel
+%modules             fftw:cray-hdf5-parallel:cray-netcdf-hdf5parallel   lccrayh parallel
 #             
 %write_binary        true                             restart
@@ -70 +70 @@
 IC:[[ \$localhost = lccrayb ]]  &&  ulimit -v unlimited
 IC:[[ \$localhost = lccrayb ]]  &&  ulimit -s unlimited
+IC:[[ \$localhost = lccrayb ]]  &&  export MPICH_MPIIO_HINTS_DISPLAY=1
+IC:[[ \$localhost = lccrayb ]]  &&  export MPICH_MPIIO_STATS=1
+IC:[[ \$localhost = lccrayb ]]  &&  E8="=8"
+IC:[[ \$localhost = lccrayb ]]  &&  export MPICH_MPIIO_HINTS="*DATA_**:striping_factor"\$E8
 IC:[[ \$localhost = lccrayh ]]  &&  export APRUN_XFER_LIMITS=1
 IC:[[ \$localhost = lccrayh ]]  &&  export APRUN_XFER_STACK_LIMIT=0
 IC:[[ \$localhost = lccrayh ]]  &&  ulimit -v unlimited
 IC:[[ \$localhost = lccrayh ]]  &&  ulimit -s unlimited
+IC:[[ \$localhost = lccrayh ]]  &&  export MPICH_MPIIO_HINTS_DISPLAY=1
+IC:[[ \$localhost = lccrayh ]]  &&  export MPICH_MPIIO_STATS=1
+IC:[[ \$localhost = lccrayh ]]  &&  E8="=8"
+IC:[[ \$localhost = lccrayh ]]  &&  export MPICH_MPIIO_HINTS="*DATA_**:striping_factor"\$E8
 #
 #----------------------------------------------------------------------------