Changeset 1171 for palm/trunk/SCRIPTS

Timestamp:

May 30, 2013 11:27:45 AM (11 years ago)

Author:

raasch

Message:

New:
---

use_reference-case activated in accelerator version. (buoyancy, diffusion_e)
new option -e which defines the execution command to be used to run PALM,
compiler options for pgi/openacc added (palm_simple_run)
parameter sets for openACC benchmarks added (trunk/EXAMPLES/benchmark_acc)

Changed:

---

split of prognostic_equations deactivated (time_integration)

Errors:

---

bugfix: diss array is allocated with full size if accelerator boards are used (init_3d_model)

File:

• palm/trunk/SCRIPTS/palm_simple_run (modified) (7 diffs)

palm/trunk/SCRIPTS/palm_simple_run

@@ -19 +19 @@
 # Current revisions:
 # -----------------
+# new option -e which defines the execution command to be used to run PALM
 #
 # Former revisions:
@@ -26 +27 @@
 # 1046 2012-11-09 14:38:45Z maronga
 # code put under GPL (PALM 3.9)
+#
+# 29/08/11 - BjornW - Adapted for lcflow (ForWind cluster in Oldenburg)
+# 18/03/10 - Siggi  - Some comments changed
+# 25/01/10 - Siggi  - Generating the first version
 
+
+#--------------------------------------------------------------------------------#
 # palm_simple_run - a simple method for running the palm code without
 #                   using the mrun script
-     # This script runs the palm code in a unique subdirectory (OUTPUT...,
-     # current time/date and number of processors are part of the subdirectory
-     # name).
-     # It requires that palm has been installed with command
-     # palm_simple_install and that the executable palm has been created
-     # with make in directory  ...../MAKE_DEPOSITORY_simple
-
-     # Last changes:
-     # 25/01/10 - Siggi  - Generating the first version
-     # 18/03/10 - Siggi  - Some comments changed
-     # 29/08/11 - BjornW - Adapted for lcflow (ForWind cluster in Oldenburg)
+#
+# This script runs the palm code in a unique subdirectory (OUTPUT...,
+# current time/date and number of processors are part of the subdirectory
+# name).
+# It requires that palm has been installed with command
+# palm_simple_install and that the executable palm has been created
+# with make in directory  ...../MAKE_DEPOSITORY_simple
+#--------------------------------------------------------------------------------#
 
 
@@ -45 +49 @@
  case=example_cbl
  cpumax=999999
+ execute_for=unknown
  localhost=unknown
  localhost_realname=$(hostname)
@@ -55 +60 @@
 
     # Read shellscript options
- while  getopts  :c:l:n:p:t:  option
+ while  getopts  :c:e:l:n:p:t:  option
  do
    case  $option  in
        (c)   case=$OPTARG;;
+       (e)   execute_for=$OPTARG;;
        (l)   localhost=$OPTARG;;
        (n)   mpi_procs_per_node=$OPTARG;;
@@ -64 +70 @@
        (t)   openmp_threads=$OPTARG;;
        (\?)  printf "\n  +++ unknown option $OPTARG \n"
-             printf "\n      allowed option are -d, -f, -l, -s \n"
+             printf "\n      allowed option are -c, -e, -l, -n, -p, -t \n"
              exit;;
    esac
@@ -122 +128 @@
  cat  >  ENVPAR  <<  %%END%%
  &envpar  run_identifier = '$case', host = '$localhost',
-          write_binary = false, tasks_per_node = $mpi_procs_per_node,
+          write_binary = 'false', tasks_per_node = $mpi_procs_per_node,
           maximum_cpu_time_allowed = ${cpumax}.,
           revision = '$global_revision',
@@ -151 +157 @@
  echo "*** palm will be run:  MPI tasks: $mpi_procs   OpenMP thread: $OMP_NUM_THREADS"
 
-# IMUK:
- mpiexec  -machinefile hostfile  -n $mpi_procs  ./palm  < runfile_atmos
+ case $execute_for in
 
-# SGI-MPT HLRN:
-# mpiexec_mpt  -np $mpi_procs  ./palm  < runfile_atmos
+    (imuk)         mpiexec  -machinefile hostfile  -n $mpi_procs  ./palm  < runfile_atmos;;
+    (sgi-mpt)      mpiexec_mpt  -np $mpi_procs  ./palm  < runfile_atmos;;
+    (hpc-flow)     mpiexec  -machinefile $TMPDIR/machines -n $mpi_procs  -env I_MPI_FABRICS shm:ofa ./palm  < runfile_atmos;;
+    (pgi-openacc)  ./palm;;
+    (*)      echo "+++ -e option to define execution command is missing";;
 
-# HPC-FLOW (ForWind):
-# mpiexec  -machinefile $TMPDIR/machines -n $mpi_procs  -env I_MPI_FABRICS shm:ofa ./palm  < runfile_atmos
-
+ esac
 
  echo "*** palm finished"