1 | PROGRAM combine_plot_fields |
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2 | |
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3 | !------------------------------------------------------------------------------! |
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4 | ! This file is part of PALM. |
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5 | ! |
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6 | ! PALM is free software: you can redistribute it and/or modify it under the terms |
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7 | ! of the GNU General Public License as published by the Free Software Foundation, |
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8 | ! either version 3 of the License, or (at your option) any later version. |
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9 | ! |
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10 | ! PALM is distributed in the hope that it will be useful, but WITHOUT ANY |
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11 | ! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR |
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12 | ! A PARTICULAR PURPOSE. See the GNU General Public License for more details. |
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13 | ! |
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14 | ! You should have received a copy of the GNU General Public License along with |
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15 | ! PALM. If not, see <http://www.gnu.org/licenses/>. |
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16 | ! |
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17 | ! Copyright 1997-2014 Leibniz Universitaet Hannover |
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18 | !--------------------------------------------------------------------------------! |
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19 | ! |
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20 | ! Current revisions: |
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21 | ! ----------------- |
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22 | ! |
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23 | ! |
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24 | ! Former revisions: |
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25 | ! ----------------- |
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26 | ! $Id: combine_plot_fields.f90 1809 2016-04-05 20:13:28Z maronga $ |
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27 | ! |
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28 | ! 1808 2016-04-05 19:44:00Z raasch |
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29 | ! cpu measurements are done with standard FORTRAN routine on every machine |
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30 | ! |
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31 | ! 1551 2015-03-03 14:18:16Z maronga |
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32 | ! Adjustments for data output of soil model quantities |
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33 | ! |
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34 | ! 1468 2014-09-24 14:06:57Z maronga |
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35 | ! Adapted for use on up to 6-digit processor cores (not tested) |
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36 | ! |
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37 | ! 1394 2014-05-06 10:17:31Z keck |
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38 | ! KIND-attribute added to all INTEGER and REAL declaration statements |
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39 | ! |
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40 | ! 1046 2012-11-09 14:38:45Z maronga |
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41 | ! code put under GPL (PALM 3.9) |
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42 | ! |
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43 | ! 691 2011-03-04 08:45:30Z maronga |
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44 | ! Bugfix: check for precursor ocean runs, removed typo |
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45 | ! |
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46 | ! 493 2010-03-01 08:30:24Z raasch |
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47 | ! Exit in case of already complete NetCDF data (due to parallel output in PALM) |
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48 | ! cpu measurements included |
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49 | ! |
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50 | ! 210 2008-11-06 08:54:02Z raasch |
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51 | ! Size of pf3d adjusted to the required output size (1 gridpoint less, along |
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52 | ! all three dimensions), because output of a subset of the data |
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53 | ! (pf3d(nxa:nxe...) in the NF90_PUT_VAR statement caused segmentation fault |
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54 | ! with the INTEL compiler. |
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55 | ! Subdomain data are read into temporary arrays pf_tmp/pf3d_tmp in order to |
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56 | ! avoid INTEL compiler warnings about (automatic) creation of temporary arrays |
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57 | ! Bugfix: three misplaced #endif directives |
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58 | ! |
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59 | ! 114 2007-10-10 00:03:15Z raasch |
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60 | ! Bugfix: model_string needed a default value |
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61 | ! |
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62 | ! Aug 07 Loop for processing of output by coupled runs, id_string does not |
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63 | ! contain modus any longer |
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64 | ! |
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65 | ! 18/01/06 Output of time-averaged data |
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66 | ! |
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67 | ! 25/05/05 Errors removed |
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68 | ! |
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69 | ! 26/04/05 Output in NetCDF format, iso2d and avs output only if parameter |
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70 | ! file exists |
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71 | ! |
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72 | ! 31/10/01 All comments and messages translated into English |
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73 | ! |
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74 | ! 23/02/99 Keine Bearbeitung komprimierter 3D-Daten |
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75 | ! Ursprungsversion vom 28/07/97 |
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76 | ! |
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77 | ! |
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78 | ! Description: |
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79 | ! ------------ |
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80 | ! This routine combines data of the PALM-subdomains into one file. In PALM |
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81 | ! every processor element opens its own file and writes 2D- or 3D-binary-data |
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82 | ! into it (different files are opened for xy-, xz-, yz-cross-sections and |
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83 | ! 3D-data). For plotting or analyzing these PE-data have to be collected and |
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84 | ! to be put into single files, which is done by this routine. |
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85 | ! Output format is NetCDF. Additionally, a data are output in a binary format |
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86 | ! readable by ISO2D-software (cross-sections) and by AVS (3D-data). |
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87 | !------------------------------------------------------------------------------! |
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88 | |
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89 | #if defined( __netcdf ) |
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90 | USE netcdf |
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91 | #endif |
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92 | |
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93 | IMPLICIT NONE |
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94 | |
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95 | ! |
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96 | !-- Local variables |
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97 | CHARACTER (LEN=2) :: modus, model_string |
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98 | CHARACTER (LEN=6) :: id_string |
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99 | CHARACTER (LEN=20) :: dimname, var_name |
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100 | CHARACTER (LEN=40) :: filename |
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101 | |
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102 | CHARACTER (LEN=2000), DIMENSION(0:1) :: var_list |
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103 | |
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104 | INTEGER, PARAMETER :: iwp = 4, spk = SELECTED_REAL_KIND( 6 ), wp = 8 |
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105 | |
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106 | INTEGER(iwp) :: av, danz, i, id, j, k, model, models, nc_stat, & |
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107 | nxa, nxag, nxe, nxeg, nya, nyag, nye, nyeg, & |
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108 | nza, nze, pos, time_step, & |
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109 | xa, xe, xxa, xxe, ya, ya_do, ya_tot, ye, ye_do, ye_tot, yya, yye, za, & |
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110 | ze, zza, zze |
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111 | |
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112 | INTEGER(8) :: count, count_rate |
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113 | |
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114 | INTEGER(iwp), DIMENSION(0:1) :: current_level, current_var, & |
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115 | fanz, id_set, id_var_time, num_var |
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116 | INTEGER(iwp), DIMENSION(4) :: id_dims_loc |
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117 | INTEGER(iwp), DIMENSION(0:1,4) :: id_dims |
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118 | INTEGER(iwp), DIMENSION(0:1,1000) :: id_var, levels |
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119 | |
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120 | LOGICAL :: avs_output, compressed, found, iso2d_output, netcdf_output, & |
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121 | netcdf_parallel, netcdf_0, netcdf_1 |
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122 | |
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123 | REAL(wp) :: cpu_start_time, cpu_end_time, dx, simulated_time |
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124 | REAL(wp), DIMENSION(:), ALLOCATABLE :: eta, ho, hu |
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125 | REAL(wp), DIMENSION(:,:), ALLOCATABLE :: pf, pf_tmp |
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126 | REAL(spk), DIMENSION(:,:,:), ALLOCATABLE :: pf3d, pf3d_tmp |
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127 | |
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128 | PRINT*, '' |
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129 | PRINT*, '' |
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130 | PRINT*, '*** combine_plot_fields ***' |
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131 | |
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132 | ! |
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133 | !-- Find out if a coupled run has been carried out |
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134 | INQUIRE( FILE='COUPLING_PORT_OPENED', EXIST=found ) |
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135 | IF ( found ) THEN |
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136 | models = 2 |
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137 | PRINT*, ' coupled run' |
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138 | ELSE |
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139 | models = 1 |
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140 | PRINT*, ' uncoupled run' |
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141 | ENDIF |
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142 | |
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143 | ! |
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144 | !-- Find out if a precursor ocean run has been carried out |
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145 | INQUIRE( FILE='PRECURSOR_OCEAN', EXIST=found ) |
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146 | IF ( found ) THEN |
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147 | model_string = '_O' |
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148 | PRINT*, ' precursor ocean run' |
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149 | ELSE |
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150 | model_string = '' |
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151 | ENDIF |
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152 | |
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153 | ! |
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154 | !-- Do everything for each model |
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155 | DO model = 1, models |
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156 | ! |
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157 | !-- Set the model string used to identify the filenames |
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158 | IF ( models == 2 ) THEN |
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159 | PRINT*, '' |
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160 | PRINT*, '*** combine_plot_fields ***' |
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161 | IF ( model == 2 ) THEN |
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162 | model_string = '_O' |
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163 | PRINT*, ' now combining ocean data' |
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164 | PRINT*, ' ========================' |
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165 | ELSE |
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166 | PRINT*, ' now combining atmosphere data' |
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167 | PRINT*, ' =============================' |
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168 | ENDIF |
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169 | ENDIF |
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170 | ! |
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171 | !-- 2D-arrays for ISO2D |
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172 | !-- Main loop for the three different cross-sections, starting with |
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173 | !-- xy-section |
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174 | modus = 'XY' |
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175 | PRINT*, '' |
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176 | DO WHILE ( modus == 'XY' .OR. modus == 'XZ' .OR. modus == 'YZ' ) |
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177 | ! |
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178 | !-- Take current time |
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179 | CALL SYSTEM_CLOCK( count, count_rate ) |
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180 | cpu_start_time = REAL( count ) / REAL( count_rate ) |
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181 | |
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182 | netcdf_parallel = .FALSE. |
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183 | ! |
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184 | !-- Check, if file from PE0 exists. If it does not exist, PALM did not |
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185 | !-- create any output for this cross-section. |
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186 | danz = 0 |
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187 | WRITE (id_string,'(I6.6)') danz |
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188 | INQUIRE ( & |
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189 | FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, & |
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190 | EXIST=found ) |
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191 | ! |
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192 | !-- Find out the number of files (equal to the number of PEs which |
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193 | !-- have been used in PALM) and open them |
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194 | DO WHILE ( found ) |
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195 | |
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196 | OPEN ( danz+110, & |
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197 | FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, & |
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198 | FORM='UNFORMATTED' ) |
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199 | danz = danz + 1 |
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200 | WRITE (id_string,'(I6.6)') danz |
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201 | INQUIRE ( & |
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202 | FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, & |
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203 | EXIST=found ) |
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204 | |
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205 | ENDDO |
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206 | |
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207 | ! |
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208 | !-- Inquire whether an iso2d parameter file exists |
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209 | INQUIRE( FILE='PLOT2D_'//modus//'_GLOBAL'//TRIM( model_string ), & |
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210 | EXIST=iso2d_output ) |
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211 | |
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212 | ! |
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213 | !-- Inquire whether a NetCDF file exists |
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214 | INQUIRE( FILE='DATA_2D_'//modus//'_NETCDF'//TRIM( model_string ), & |
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215 | EXIST=netcdf_0 ) |
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216 | |
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217 | ! |
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218 | !-- Inquire whether a NetCDF file for time-averaged data exists |
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219 | INQUIRE( FILE='DATA_2D_'//modus//'_AV_NETCDF'//TRIM( model_string ),& |
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220 | EXIST=netcdf_1 ) |
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221 | |
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222 | IF ( netcdf_0 .OR. netcdf_1 ) THEN |
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223 | netcdf_output = .TRUE. |
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224 | ! |
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225 | !-- Inquire whether the NetCDF file is already complete (parallel |
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226 | !-- output) |
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227 | INQUIRE( FILE='NO_COMBINE_PLOT_FIELDS_'//modus, & |
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228 | EXIST=netcdf_parallel ) |
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229 | IF ( netcdf_parallel ) THEN |
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230 | netcdf_parallel = .TRUE. |
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231 | ELSE |
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232 | netcdf_parallel = .FALSE. |
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233 | ENDIF |
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234 | ELSE |
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235 | netcdf_output = .FALSE. |
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236 | ENDIF |
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237 | |
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238 | ! |
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239 | !-- Info-output |
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240 | PRINT*, '' |
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241 | PRINT*, '*** combine_plot_fields ***' |
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242 | #if defined( __netcdf ) |
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243 | IF ( netcdf_output ) THEN |
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244 | IF ( netcdf_parallel ) THEN |
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245 | PRINT*, ' NetCDF ' // modus // '-data are in one file ', & |
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246 | '(NetCDF4-format) - merging not neccessary' |
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247 | ELSE |
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248 | PRINT*, ' NetCDF output enabled' |
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249 | ENDIF |
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250 | ENDIF |
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251 | #else |
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252 | IF ( netcdf_output ) THEN |
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253 | PRINT*, '--- Sorry, no NetCDF support on this host' |
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254 | netcdf_output = .FALSE. |
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255 | ENDIF |
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256 | #endif |
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257 | IF ( .NOT. netcdf_parallel ) THEN |
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258 | IF ( danz /= 0 ) THEN |
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259 | PRINT*, ' ',modus,'-section: ', danz, ' file(s) found' |
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260 | ELSE |
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261 | PRINT*, ' no ', modus, '-section data available' |
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262 | ENDIF |
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263 | ENDIF |
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264 | |
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265 | IF ( netcdf_output .AND. .NOT. netcdf_parallel .AND. danz /= 0 ) & |
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266 | THEN |
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267 | #if defined( __netcdf ) |
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268 | DO av = 0, 1 |
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269 | |
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270 | IF ( av == 0 .AND. .NOT. netcdf_0 ) CYCLE |
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271 | IF ( av == 1 .AND. .NOT. netcdf_1 ) CYCLE |
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272 | |
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273 | ! |
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274 | !-- Open NetCDF dataset |
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275 | IF ( av == 0 ) THEN |
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276 | filename = 'DATA_2D_'//modus//'_NETCDF' & |
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277 | //TRIM( model_string ) |
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278 | ELSE |
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279 | filename = 'DATA_2D_'//modus//'_AV_NETCDF' & |
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280 | //TRIM( model_string ) |
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281 | ENDIF |
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282 | nc_stat = NF90_OPEN( filename, NF90_WRITE, id_set(av) ) |
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283 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 1 ) |
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284 | |
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285 | ! |
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286 | !-- Get the list of variables (order of variables corresponds with |
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287 | !-- the order of data on the binary file) |
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288 | var_list(av) = ' ' ! GET_ATT does not assign trailing blanks |
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289 | nc_stat = NF90_GET_ATT( id_set(av), NF90_GLOBAL, 'VAR_LIST', & |
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290 | var_list(av) ) |
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291 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 2 ) |
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292 | |
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293 | ! |
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294 | !-- Inquire id of the time coordinate variable |
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295 | nc_stat = NF90_INQ_VARID( id_set(av), 'time', id_var_time(av) ) |
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296 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 3 ) |
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297 | |
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298 | ! |
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299 | !-- Count number of variables; there is one more semicolon in the |
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300 | !-- string than variable names |
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301 | num_var(av) = -1 |
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302 | DO i = 1, LEN( var_list(av) ) |
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303 | IF ( var_list(av)(i:i) == ';' ) num_var(av) = num_var(av) +1 |
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304 | ENDDO |
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305 | |
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306 | ! |
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307 | !-- Extract the variable names from the list and inquire their |
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308 | !-- NetCDF IDs |
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309 | pos = INDEX( var_list(av), ';' ) |
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310 | ! |
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311 | !-- Loop over all variables |
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312 | DO i = 1, num_var(av) |
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313 | |
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314 | ! |
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315 | !-- Extract variable name from list |
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316 | var_list(av) = var_list(av)(pos+1:) |
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317 | pos = INDEX( var_list(av), ';' ) |
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318 | var_name = var_list(av)(1:pos-1) |
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319 | |
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320 | ! |
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321 | !-- Get variable ID from name |
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322 | nc_stat = NF90_INQ_VARID( id_set(av), TRIM( var_name ), & |
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323 | id_var(av,i) ) |
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324 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 4 ) |
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325 | |
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326 | ! |
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327 | !-- Get number of x/y/z levels for that variable |
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328 | nc_stat = NF90_INQUIRE_VARIABLE( id_set(av), id_var(av,i), & |
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329 | dimids = id_dims_loc ) |
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330 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 5 ) |
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331 | id_dims(av,:) = id_dims_loc |
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332 | |
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333 | ! |
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334 | !-- Inquire dimension ID |
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335 | DO j = 1, 4 |
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336 | nc_stat = NF90_INQUIRE_DIMENSION( id_set(av), & |
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337 | id_dims(av,j), dimname, levels(av,i) ) |
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338 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 6 ) |
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339 | |
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340 | IF ( modus == 'XY' .AND. INDEX(dimname, 'z') /= 0 ) EXIT |
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341 | IF ( modus == 'XZ' .AND. INDEX(dimname, 'y') /= 0 ) EXIT |
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342 | IF ( modus == 'YZ' .AND. INDEX(dimname, 'x') /= 0 ) EXIT |
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343 | ENDDO |
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344 | |
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345 | ENDDO |
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346 | |
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347 | ENDDO ! av = 0, 1 |
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348 | |
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349 | #endif |
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350 | ENDIF |
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351 | |
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352 | ! |
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353 | !-- Read the arrays, as long as the end of the file is reached |
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354 | IF ( .NOT. netcdf_parallel ) THEN |
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355 | |
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356 | fanz = 0 |
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357 | current_level = 1 |
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358 | current_var = 999999999 |
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359 | |
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360 | DO WHILE ( danz /= 0 ) |
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361 | |
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362 | ! |
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363 | !-- Loop over all files (reading data of the subdomains) |
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364 | DO id = 0, danz-1 |
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365 | ! |
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366 | !-- File from PE0 contains special information at the beginning, |
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367 | !-- concerning the lower and upper indices of the total-domain |
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368 | !-- used in PALM (nxag, nxeg, nyag, nyeg) and the lower and |
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369 | !-- upper indices of the array to be written by this routine |
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370 | !-- (nxa, nxe, nya, nye). Usually in the horizontal directions |
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371 | !-- nxag=-1 and nxa=0 while all other variables have the same |
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372 | !-- value (i.e. nxeg=nxe). |
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373 | !-- Allocate necessary arrays, open the output file and write |
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374 | !-- the coordinate informations needed by ISO2D. |
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375 | IF ( id == 0 .AND. fanz(0) == 0 .AND. fanz(1) == 0 ) THEN |
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376 | READ ( id+110 ) nxag, nxeg, nyag, nyeg |
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377 | READ ( id+110 ) nxa, nxe, nya, nye |
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378 | ALLOCATE ( eta(nya:nye), ho(nxa:nxe), hu(nxa:nxe), & |
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379 | pf(nxag:nxeg,nyag:nyeg) ) |
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380 | READ ( id+110 ) dx, eta, hu, ho |
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381 | |
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382 | |
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383 | ! |
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384 | !-- Set actual domain bounds to total domain |
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385 | ya_do = nya |
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386 | ye_do = nye |
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387 | |
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388 | IF ( iso2d_output ) THEN |
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389 | OPEN ( 2, FILE='PLOT2D_'//modus//TRIM( model_string ),& |
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390 | FORM='UNFORMATTED' ) |
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391 | WRITE ( 2 ) dx, eta, hu, ho |
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392 | ENDIF |
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393 | ENDIF |
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394 | ! |
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395 | !-- Read output time |
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396 | IF ( netcdf_output .AND. id == 0 ) THEN |
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397 | IF ( netcdf_1 ) THEN |
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398 | READ ( id+110, END=998 ) simulated_time, time_step, av |
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399 | ELSE |
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400 | ! |
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401 | !-- For compatibility with earlier PALM versions |
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402 | READ ( id+110, END=998 ) simulated_time, time_step |
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403 | av = 0 |
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404 | ENDIF |
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405 | ENDIF |
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406 | ! |
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407 | !-- Read subdomain indices |
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408 | READ ( id+110, END=998 ) xa, xe, ya, ye, ya_tot, ye_tot |
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409 | |
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410 | ! |
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411 | !-- IF the PE made no output (in case that no part of the |
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412 | !-- cross-section is situated on this PE), indices have the |
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413 | !-- value -1 |
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414 | IF ( .NOT. ( xa == -1 .AND. xe == -1 .AND. & |
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415 | ya == -1 .AND. ye == -1 ) ) THEN |
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416 | |
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417 | |
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418 | ! |
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419 | !-- Read the subdomain grid-point values |
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420 | ALLOCATE( pf_tmp(xa:xe,ya:ye) ) |
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421 | READ ( id+110 ) pf_tmp |
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422 | ! |
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423 | !-- Calculate indices on atmospheric grid (e.g. for soil model |
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424 | !-- quantities) |
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425 | IF ( ya /= ya_tot .OR. ye /= ye_tot ) THEN |
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426 | ye_do = ye - ya |
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427 | ya_do = ya |
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428 | pf(xa:xe,ya_do:ye_do) = pf_tmp |
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429 | ELSE |
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430 | ye_do = nye |
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431 | ya_do = nya |
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432 | pf(xa:xe,ya:ye) = pf_tmp |
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433 | ENDIF |
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434 | |
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435 | DEALLOCATE( pf_tmp ) |
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436 | ENDIF |
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437 | IF ( id == 0 ) fanz(av) = fanz(av) + 1 |
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438 | |
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439 | ENDDO |
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440 | ! |
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441 | !-- Write the data of the total domain cross-section |
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442 | IF ( iso2d_output ) WRITE ( 2 ) pf(nxa:nxe,nya:nye) |
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443 | |
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444 | ! |
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445 | !-- Write same data in NetCDF format |
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446 | IF ( netcdf_output ) THEN |
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447 | #if defined( __netcdf ) |
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448 | ! |
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449 | !-- Check if a new time step has begun; if yes write data to |
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450 | !-- time axis |
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451 | IF ( current_var(av) > num_var(av) ) THEN |
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452 | current_var(av) = 1 |
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453 | nc_stat = NF90_PUT_VAR( id_set(av), id_var_time(av), & |
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454 | (/ simulated_time /), & |
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455 | start = (/ time_step /), & |
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456 | count = (/ 1 /) ) |
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457 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 7 ) |
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458 | ENDIF |
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459 | |
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460 | ! |
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461 | !-- Now write the data; this is mode dependent |
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462 | SELECT CASE ( modus ) |
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463 | |
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464 | CASE ( 'XY' ) |
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465 | nc_stat = NF90_PUT_VAR( id_set(av), & |
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466 | id_var(av,current_var(av)), & |
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467 | pf(nxa:nxe,nya:nye), & |
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468 | start = (/ 1, 1, current_level(av), time_step /), & |
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469 | count = (/ nxe-nxa+1, nye-nya+1, 1, 1 /) ) |
---|
470 | IF ( nc_stat /= NF90_NOERR ) THEN |
---|
471 | CALL handle_netcdf_error( 8 ) |
---|
472 | ENDIF |
---|
473 | |
---|
474 | CASE ( 'XZ' ) |
---|
475 | nc_stat = NF90_PUT_VAR( id_set(av), & |
---|
476 | id_var(av,current_var(av)), & |
---|
477 | pf(nxa:nxe,ya_do:ye_do), & |
---|
478 | start = (/ 1, current_level(av), 1, time_step /), & |
---|
479 | count = (/ nxe-nxa+1, 1, ye_do-ya_do+1, 1 /) ) |
---|
480 | IF ( nc_stat /= NF90_NOERR ) THEN |
---|
481 | CALL handle_netcdf_error( 9 ) |
---|
482 | ENDIF |
---|
483 | |
---|
484 | CASE ( 'YZ' ) |
---|
485 | nc_stat = NF90_PUT_VAR( id_set(av), & |
---|
486 | id_var(av,current_var(av)), & |
---|
487 | pf(nxa:nxe,ya_do:ye_do), & |
---|
488 | start = (/ current_level(av), 1, 1, time_step /), & |
---|
489 | count = (/ 1, nxe-nxa+1, ye_do-ya_do+1, 1 /) ) |
---|
490 | IF ( nc_stat /= NF90_NOERR ) THEN |
---|
491 | CALL handle_netcdf_error( 10 ) |
---|
492 | ENDIF |
---|
493 | |
---|
494 | END SELECT |
---|
495 | |
---|
496 | ! |
---|
497 | !-- Data is written, check if max level is reached |
---|
498 | current_level(av) = current_level(av) + 1 |
---|
499 | IF ( current_level(av) > levels(av,current_var(av)) ) THEN |
---|
500 | current_level(av) = 1 |
---|
501 | current_var(av) = current_var(av) + 1 |
---|
502 | ENDIF |
---|
503 | |
---|
504 | #endif |
---|
505 | ENDIF |
---|
506 | |
---|
507 | ENDDO |
---|
508 | |
---|
509 | ENDIF |
---|
510 | |
---|
511 | 998 IF ( danz /= 0 .AND. .NOT. netcdf_parallel ) THEN |
---|
512 | ! |
---|
513 | !-- Print the number of the arrays processed |
---|
514 | WRITE (*,'(16X,I4,A)') fanz(0)+fanz(1), ' array(s) processed' |
---|
515 | IF ( fanz(1) /= 0 ) THEN |
---|
516 | WRITE (*,'(16X,I4,A)') fanz(1), ' array(s) are time-averaged' |
---|
517 | ENDIF |
---|
518 | |
---|
519 | ! |
---|
520 | !-- Close all files and deallocate arrays |
---|
521 | DO id = 0, danz-1 |
---|
522 | CLOSE ( id+110 ) |
---|
523 | ENDDO |
---|
524 | CLOSE ( 2 ) |
---|
525 | DEALLOCATE ( eta, ho, hu, pf ) |
---|
526 | |
---|
527 | ! |
---|
528 | !-- Close the NetCDF file |
---|
529 | IF ( netcdf_output ) THEN |
---|
530 | #if defined( __netcdf ) |
---|
531 | IF ( netcdf_0 ) THEN |
---|
532 | nc_stat = NF90_CLOSE( id_set(0) ) |
---|
533 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 11 ) |
---|
534 | ENDIF |
---|
535 | IF ( netcdf_1 ) THEN |
---|
536 | nc_stat = NF90_CLOSE( id_set(1) ) |
---|
537 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 12 ) |
---|
538 | ENDIF |
---|
539 | #endif |
---|
540 | ENDIF |
---|
541 | ENDIF |
---|
542 | |
---|
543 | ! |
---|
544 | !-- Output required cpu time |
---|
545 | IF ( danz /= 0 .AND. .NOT. netcdf_parallel ) THEN |
---|
546 | CALL SYSTEM_CLOCK( count, count_rate ) |
---|
547 | cpu_end_time = REAL( count ) / REAL( count_rate ) |
---|
548 | WRITE (*,'(5X,A,F9.3,A)') 'Required cpu-time: ', & |
---|
549 | cpu_end_time-cpu_start_time, ' sec' |
---|
550 | ENDIF |
---|
551 | |
---|
552 | ! |
---|
553 | !-- Choose the next cross-section |
---|
554 | SELECT CASE ( modus ) |
---|
555 | CASE ( 'XY' ) |
---|
556 | modus = 'XZ' |
---|
557 | CASE ( 'XZ' ) |
---|
558 | modus = 'YZ' |
---|
559 | CASE ( 'YZ' ) |
---|
560 | modus = 'no' |
---|
561 | END SELECT |
---|
562 | |
---|
563 | ENDDO |
---|
564 | |
---|
565 | |
---|
566 | ! |
---|
567 | !-- Combine the 3D-arrays |
---|
568 | netcdf_parallel = .FALSE. |
---|
569 | |
---|
570 | ! |
---|
571 | !-- Info-output |
---|
572 | PRINT*, ' ' |
---|
573 | PRINT*, '*** combine_plot_fields ***' |
---|
574 | |
---|
575 | ! |
---|
576 | !-- Take current time |
---|
577 | CALL SYSTEM_CLOCK( count, count_rate ) |
---|
578 | cpu_start_time = REAL( count ) / REAL( count_rate ) |
---|
579 | |
---|
580 | ! |
---|
581 | !-- Inquire whether an avs fld file exists |
---|
582 | INQUIRE( FILE='PLOT3D_FLD'//TRIM( model_string ), EXIST=avs_output ) |
---|
583 | |
---|
584 | ! |
---|
585 | !-- Inquire whether a NetCDF file exists |
---|
586 | INQUIRE( FILE='DATA_3D_NETCDF'//TRIM( model_string ), EXIST=netcdf_0 ) |
---|
587 | |
---|
588 | ! |
---|
589 | !-- Inquire whether a NetCDF file for time-averaged data exists |
---|
590 | INQUIRE( FILE='DATA_3D_AV_NETCDF'//TRIM( model_string ), EXIST=netcdf_1 ) |
---|
591 | |
---|
592 | IF ( netcdf_0 .OR. netcdf_1 ) THEN |
---|
593 | netcdf_output = .TRUE. |
---|
594 | ! |
---|
595 | !-- Inquire whether the NetCDF file is already complete (parallel output) |
---|
596 | INQUIRE( FILE='NO_COMBINE_PLOT_FIELDS_3D', EXIST=netcdf_parallel ) |
---|
597 | IF ( netcdf_parallel ) THEN |
---|
598 | netcdf_parallel = .TRUE. |
---|
599 | ELSE |
---|
600 | netcdf_parallel = .FALSE. |
---|
601 | ENDIF |
---|
602 | ELSE |
---|
603 | netcdf_output = .FALSE. |
---|
604 | ENDIF |
---|
605 | |
---|
606 | ! |
---|
607 | !-- Check, if file from PE0 exists; not neccessary in case of parallel |
---|
608 | !-- PALM output |
---|
609 | IF ( .NOT. netcdf_parallel ) THEN |
---|
610 | danz = 0 |
---|
611 | WRITE (id_string,'(I6.6)') danz |
---|
612 | INQUIRE ( & |
---|
613 | FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM( id_string ), & |
---|
614 | EXIST=found ) |
---|
615 | ELSE |
---|
616 | found = .FALSE. |
---|
617 | ENDIF |
---|
618 | |
---|
619 | ! |
---|
620 | !-- Combination only works, if data are not compressed. In that case, |
---|
621 | !-- PALM created a flag file (PLOT3D_COMPRESSED) |
---|
622 | INQUIRE ( FILE='PLOT3D_COMPRESSED'//TRIM( model_string ), & |
---|
623 | EXIST=compressed ) |
---|
624 | |
---|
625 | ! |
---|
626 | !-- Find out the number of files and open them |
---|
627 | DO WHILE ( found .AND. .NOT. compressed ) |
---|
628 | |
---|
629 | OPEN ( danz+110, & |
---|
630 | FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM(id_string), & |
---|
631 | FORM='UNFORMATTED') |
---|
632 | danz = danz + 1 |
---|
633 | WRITE (id_string,'(I6.6)') danz |
---|
634 | INQUIRE ( & |
---|
635 | FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM(id_string), & |
---|
636 | EXIST=found ) |
---|
637 | |
---|
638 | ENDDO |
---|
639 | |
---|
640 | #if defined( __netcdf ) |
---|
641 | IF ( netcdf_output ) THEN |
---|
642 | IF ( netcdf_parallel ) THEN |
---|
643 | PRINT*, ' NetCDF data are in one file (NetCDF4-format)', & |
---|
644 | ' - merging not neccessary' |
---|
645 | ELSE |
---|
646 | PRINT*, ' NetCDF output enabled' |
---|
647 | ENDIF |
---|
648 | ENDIF |
---|
649 | #else |
---|
650 | IF ( netcdf_output ) THEN |
---|
651 | PRINT*, '--- Sorry, no NetCDF support on this host' |
---|
652 | netcdf_output = .FALSE. |
---|
653 | ENDIF |
---|
654 | #endif |
---|
655 | IF ( .NOT. netcdf_parallel ) THEN |
---|
656 | IF ( danz /= 0 ) THEN |
---|
657 | PRINT*, ' 3D-data: ', danz, ' file(s) found' |
---|
658 | ELSE |
---|
659 | IF ( found .AND. compressed ) THEN |
---|
660 | PRINT*, '+++ no 3D-data processing, since data are compressed' |
---|
661 | ELSE |
---|
662 | PRINT*, ' no 3D-data file available' |
---|
663 | ENDIF |
---|
664 | ENDIF |
---|
665 | ENDIF |
---|
666 | |
---|
667 | IF ( netcdf_output .AND. .NOT. netcdf_parallel .AND. danz /= 0 ) THEN |
---|
668 | #if defined( __netcdf ) |
---|
669 | DO av = 0, 1 |
---|
670 | |
---|
671 | IF ( av == 0 .AND. .NOT. netcdf_0 ) CYCLE |
---|
672 | IF ( av == 1 .AND. .NOT. netcdf_1 ) CYCLE |
---|
673 | |
---|
674 | ! |
---|
675 | !-- Open NetCDF dataset |
---|
676 | IF ( av == 0 ) THEN |
---|
677 | filename = 'DATA_3D_NETCDF'//TRIM( model_string ) |
---|
678 | ELSE |
---|
679 | filename = 'DATA_3D_AV_NETCDF'//TRIM( model_string ) |
---|
680 | ENDIF |
---|
681 | nc_stat = NF90_OPEN( filename, NF90_WRITE, id_set(av) ) |
---|
682 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 13 ) |
---|
683 | |
---|
684 | |
---|
685 | ! |
---|
686 | !-- Get the list of variables (order of variables corresponds with the |
---|
687 | !-- order of data on the binary file) |
---|
688 | var_list(av) = ' ' ! GET_ATT does not assign trailing blanks |
---|
689 | nc_stat = NF90_GET_ATT( id_set(av), NF90_GLOBAL, 'VAR_LIST', & |
---|
690 | var_list(av) ) |
---|
691 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 14 ) |
---|
692 | |
---|
693 | ! |
---|
694 | !-- Inquire id of the time coordinate variable |
---|
695 | nc_stat = NF90_INQ_VARID( id_set(av), 'time', id_var_time(av) ) |
---|
696 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 15 ) |
---|
697 | |
---|
698 | ! |
---|
699 | !-- Count number of variables; there is one more semicolon in the |
---|
700 | !-- string than variable names |
---|
701 | num_var(av) = -1 |
---|
702 | DO i = 1, LEN( var_list(av) ) |
---|
703 | IF ( var_list(av)(i:i) == ';' ) num_var(av) = num_var(av) + 1 |
---|
704 | ENDDO |
---|
705 | |
---|
706 | ! |
---|
707 | !-- Extract the variable names from the list and inquire their NetCDF |
---|
708 | !-- IDs |
---|
709 | pos = INDEX( var_list(av), ';' ) |
---|
710 | ! |
---|
711 | !-- Loop over all variables |
---|
712 | DO i = 1, num_var(av) |
---|
713 | |
---|
714 | ! |
---|
715 | !-- Extract variable name from list |
---|
716 | var_list(av) = var_list(av)(pos+1:) |
---|
717 | pos = INDEX( var_list(av), ';' ) |
---|
718 | var_name = var_list(av)(1:pos-1) |
---|
719 | |
---|
720 | ! |
---|
721 | !-- Get variable ID from name |
---|
722 | nc_stat = NF90_INQ_VARID( id_set(av), TRIM( var_name ), & |
---|
723 | id_var(av,i) ) |
---|
724 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 16 ) |
---|
725 | |
---|
726 | ENDDO |
---|
727 | |
---|
728 | ENDDO ! av=0,1 |
---|
729 | |
---|
730 | #endif |
---|
731 | ENDIF |
---|
732 | |
---|
733 | ! |
---|
734 | !-- Read arrays, until the end of the file is reached |
---|
735 | IF ( .NOT. netcdf_parallel ) THEN |
---|
736 | |
---|
737 | current_var = 999999999 |
---|
738 | fanz = 0 |
---|
739 | DO WHILE ( danz /= 0 ) |
---|
740 | |
---|
741 | ! |
---|
742 | !-- Loop over all files |
---|
743 | DO id = 0, danz-1 |
---|
744 | ! |
---|
745 | !-- File from PE0 contains special information at the beginning, |
---|
746 | !-- concerning the lower and upper indices of the total-domain used |
---|
747 | !-- in PALM (nxag, nxeg, nyag, nyeg) and the lower and |
---|
748 | !-- upper indices of the array to be written by this routine (nxa, |
---|
749 | !-- nxe, nya, nye, nza, nze). Usually nxag=-1 and nxa=0, nyag=-1 |
---|
750 | !-- and nya=0, nzeg=nz and nze=nz_do3d. |
---|
751 | !-- Allocate necessary array and open the output file. |
---|
752 | IF ( id == 0 .AND. fanz(0) == 0 .AND. fanz(1) == 0 ) THEN |
---|
753 | READ ( id+110 ) nxag, nxeg, nyag, nyeg |
---|
754 | READ ( id+110 ) nxa, nxe, nya, nye, nza, nze |
---|
755 | ALLOCATE ( pf3d(nxa:nxe,nya:nye,nza:nze) ) |
---|
756 | IF ( avs_output ) THEN |
---|
757 | OPEN ( 2, FILE='PLOT3D_DATA'//TRIM( model_string ), & |
---|
758 | FORM='UNFORMATTED' ) |
---|
759 | ENDIF |
---|
760 | ENDIF |
---|
761 | |
---|
762 | ! |
---|
763 | !-- Read output time |
---|
764 | IF ( netcdf_output .AND. id == 0 ) THEN |
---|
765 | IF ( netcdf_1 ) THEN |
---|
766 | READ ( id+110, END=999 ) simulated_time, time_step, av |
---|
767 | ELSE |
---|
768 | ! |
---|
769 | !-- For compatibility with earlier PALM versions |
---|
770 | READ ( id+110, END=999 ) simulated_time, time_step |
---|
771 | av = 0 |
---|
772 | ENDIF |
---|
773 | ENDIF |
---|
774 | |
---|
775 | ! |
---|
776 | !-- Read subdomain indices and grid point values |
---|
777 | READ ( id+110, END=999 ) xa, xe, ya, ye, za, ze |
---|
778 | ALLOCATE( pf3d_tmp(xa:xe,ya:ye,za:ze) ) |
---|
779 | READ ( id+110 ) pf3d_tmp |
---|
780 | |
---|
781 | xxa = MAX( nxa, xa ) |
---|
782 | xxe = MIN( nxe, xe ) |
---|
783 | yya = MAX( nya, ya ) |
---|
784 | yye = MIN( nye, ye ) |
---|
785 | DO k = za, ze |
---|
786 | DO j = yya, yye |
---|
787 | DO i = xxa, xxe |
---|
788 | pf3d(i,j,k) = pf3d_tmp(i,j,k) |
---|
789 | ENDDO |
---|
790 | ENDDO |
---|
791 | ENDDO |
---|
792 | |
---|
793 | DEALLOCATE( pf3d_tmp ) |
---|
794 | IF ( id == 0 ) fanz(av) = fanz(av) + 1 |
---|
795 | |
---|
796 | ENDDO |
---|
797 | |
---|
798 | ! |
---|
799 | !-- Write data of the total domain |
---|
800 | IF ( avs_output ) WRITE ( 2 ) pf3d(nxa:nxe,nya:nye,nza:nze) |
---|
801 | |
---|
802 | ! |
---|
803 | !-- Write same data in NetCDF format |
---|
804 | IF ( netcdf_output ) THEN |
---|
805 | #if defined( __netcdf ) |
---|
806 | ! |
---|
807 | !-- Check if a new time step has begun; if yes write data to time |
---|
808 | !-- axis |
---|
809 | IF ( current_var(av) > num_var(av) ) THEN |
---|
810 | current_var(av) = 1 |
---|
811 | nc_stat = NF90_PUT_VAR( id_set(av), id_var_time(av), & |
---|
812 | (/ simulated_time /),& |
---|
813 | start = (/ time_step /), count = (/ 1 /) ) |
---|
814 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 17 ) |
---|
815 | ENDIF |
---|
816 | |
---|
817 | ! |
---|
818 | !-- Now write the data |
---|
819 | nc_stat = NF90_PUT_VAR( id_set(av), id_var(av,current_var(av)),& |
---|
820 | pf3d(nxa:nxe,nya:nye,za:ze), start = (/ 1, 1, 1, time_step /),& |
---|
821 | count = (/ nxe-nxa+1, nye-nya+1, ze-za+1, 1 /) ) |
---|
822 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 18 ) |
---|
823 | |
---|
824 | current_var(av) = current_var(av) + 1 |
---|
825 | |
---|
826 | #endif |
---|
827 | ENDIF |
---|
828 | |
---|
829 | ENDDO |
---|
830 | |
---|
831 | ENDIF |
---|
832 | |
---|
833 | 999 IF ( danz /= 0 .AND. .NOT. netcdf_parallel ) THEN |
---|
834 | ! |
---|
835 | !-- Print the number of arrays processed |
---|
836 | WRITE (*,'(16X,I4,A)') fanz(0)+fanz(1), ' array(s) processed' |
---|
837 | IF ( fanz(1) /= 0 ) THEN |
---|
838 | WRITE (*,'(16X,I4,A)') fanz(1), ' array(s) are time-averaged' |
---|
839 | ENDIF |
---|
840 | ! |
---|
841 | !-- Close all files and deallocate array |
---|
842 | DO id = 0, danz-1 |
---|
843 | CLOSE ( id+110 ) |
---|
844 | ENDDO |
---|
845 | CLOSE ( 2 ) |
---|
846 | DEALLOCATE ( pf3d ) |
---|
847 | ! |
---|
848 | !-- Close the NetCDF file |
---|
849 | IF ( netcdf_output ) THEN |
---|
850 | #if defined( __netcdf ) |
---|
851 | IF ( netcdf_0 ) THEN |
---|
852 | nc_stat = NF90_CLOSE( id_set(0) ) |
---|
853 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 19 ) |
---|
854 | ENDIF |
---|
855 | IF ( netcdf_1 ) THEN |
---|
856 | nc_stat = NF90_CLOSE( id_set(1) ) |
---|
857 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 20 ) |
---|
858 | ENDIF |
---|
859 | #endif |
---|
860 | ENDIF |
---|
861 | |
---|
862 | ! |
---|
863 | !-- Output required cpu time |
---|
864 | CALL SYSTEM_CLOCK( count, count_rate ) |
---|
865 | cpu_end_time = REAL( count ) / REAL( count_rate ) |
---|
866 | WRITE (*,'(5X,A,F9.3,A)') 'Required cpu-time: ', & |
---|
867 | cpu_end_time-cpu_start_time, ' sec' |
---|
868 | |
---|
869 | ENDIF |
---|
870 | |
---|
871 | ENDDO ! models |
---|
872 | |
---|
873 | |
---|
874 | CONTAINS |
---|
875 | |
---|
876 | |
---|
877 | SUBROUTINE handle_netcdf_error( errno ) |
---|
878 | ! |
---|
879 | !-- Prints out a text message corresponding to the current NetCDF status |
---|
880 | |
---|
881 | IMPLICIT NONE |
---|
882 | |
---|
883 | INTEGER, INTENT(IN) :: errno |
---|
884 | |
---|
885 | #if defined( __netcdf ) |
---|
886 | IF ( nc_stat /= NF90_NOERR ) THEN |
---|
887 | PRINT*, '+++ combine_plot_fields netcdf: ', av, errno, & |
---|
888 | TRIM( nf90_strerror( nc_stat ) ) |
---|
889 | ENDIF |
---|
890 | #endif |
---|
891 | |
---|
892 | END SUBROUTINE handle_netcdf_error |
---|
893 | |
---|
894 | |
---|
895 | END PROGRAM combine_plot_fields |
---|
896 | |
---|
897 | |
---|
898 | |
---|