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combine_plot_fields.f90 @ 158

Last change on this file since 158 was 139, checked in by raasch, 17 years ago

New:
---

Plant canopy model of Watanabe (2004,BLM 112,307-341) added.
It can be switched on by the inipar parameter plant_canopy.
The inipar parameter canopy_mode can be used to prescribe a
plant canopy type. The default case is a homogeneous plant
canopy. Heterogeneous distributions of the leaf area
density and the canopy drag coefficient can be defined in the
new routine user_init_plant_canopy (user_interface).
The inipar parameters lad_surface, lad_vertical_gradient and
lad_vertical_gradient_level can be used in order to
prescribe the vertical profile of leaf area density. The
inipar parameter drag_coefficient determines the canopy
drag coefficient.
Finally, the inipar parameter pch_index determines the
index of the upper boundary of the plant canopy.

Allow new case bc_uv_t = 'dirichlet_0' for channel flow.

For unknown variables (CASE DEFAULT) call new subroutine user_data_output_dvrp

Pressure boundary conditions for vertical walls added to the multigrid solver.
They are applied using new wall flag arrays (wall_flags_..) which are defined
for each grid level. New argument gls added to routine user_init_grid
(user_interface).

Frequence of sorting particles can be controlled with new particles_par
parameter dt_sort_particles. Sorting is moved from the SGS timestep loop in
advec_particles after the end of this loop.

advec_particles, check_parameters, data_output_dvrp, header, init_3d_model, init_grid, init_particles, init_pegrid, modules, package_parin, parin, plant_canopy_model, read_var_list, read_3d_binary, user_interface, write_var_list, write_3d_binary

Changed:

Redefine initial nzb_local as the actual total size of topography (later the
extent of topography in nzb_local is reduced by 1dx at the E topography walls
and by 1dy at the N topography walls to form the basis for nzb_s_inner);
for consistency redefine 'single_building' case.

Vertical profiles now based on nzb_s_inner; they are divided by
ngp_2dh_s_inner (scalars, procucts of scalars) and ngp_2dh (staggered velocity
components and their products, procucts of scalars and velocity components),
respectively.

Allow two instead of one digit to specify isosurface and slicer variables.

Status of 3D-volume NetCDF data file only depends on switch netcdf_64bit_3d (check_open)

prognostic_equations include the respective wall_*flux in the parameter list of
calls of diffusion_s. Same as before, only the values of wall_heatflux(0:4)
can be assigned. At present, wall_humidityflux, wall_qflux, wall_salinityflux,
and wall_scalarflux are kept zero. diffusion_s uses the respective wall_*flux
instead of wall_heatflux. This update serves two purposes:

it avoids errors in calculations with humidity/scalar/salinity and prescribed

non-zero wall_heatflux,

it prepares PALM for a possible assignment of wall fluxes of

humidity/scalar/salinity in a future release.

buoyancy, check_open, data_output_dvrp, diffusion_s, diffusivities, flow_statistics, header, init_3d_model, init_dvrp, init_grid, modules, prognostic_equations

Errors:

Bugfix: summation of sums_l_l in diffusivities.

Several bugfixes in the ocean part: Initial density rho is calculated
(init_ocean). Error in initializing u_init and v_init removed
(check_parameters). Calculation of density flux now starts from
nzb+1 (production_e).

Bugfix: pleft/pright changed to pnorth/psouth in sendrecv of particle tail
numbers along y, small bugfixes in the SGS part (advec_particles)

Bugfix: model_string needed a default value (combine_plot_fields)

Bugfix: wavenumber calculation for even nx in routines maketri (poisfft)

Bugfix: assignment of fluxes at walls

Bugfix: absolute value of f must be used when calculating the Blackadar mixing length (init_1d_model)

advec_particles, check_parameters, combine_plot_fields, diffusion_s, diffusivities, init_ocean, init_1d_model, poisfft, production_e

Property svn:keywords set to Id

File size: 25.7 KB

Line
1	PROGRAM combine_plot_fields
2
3	!------------------------------------------------------------------------------!
4	! Actual revisions:
5	! -----------------
6	!
7	!
8	! Former revisions:
9	! -----------------
10	! $Id: combine_plot_fields.f90 139 2007-11-29 09:37:41Z steinfeld $
11	!
12	! 114 2007-10-10 00:03:15Z raasch
13	! Bugfix: model_string needed a default value
14	!
15	! Aug 07 Loop for processing of output by coupled runs, id_string does not
16	! contain modus any longer
17	!
18	! 18/01/06 Output of time-averaged data
19	!
20	! 25/05/05 Errors removed
21	!
22	! 26/04/05 Output in NetCDF format, iso2d and avs output only if parameter
23	! file exists
24	!
25	! 31/10/01 All comments and messages translated into English
26	!
27	! 23/02/99 Keine Bearbeitung komprimierter 3D-Daten
28	! Ursprungsversion vom 28/07/97
29	!
30	!
31	! Description:
32	! ------------
33	! This routine combines data of the PALM-subdomains into one file. In PALM
34	! every processor element opens its own file and writes 2D- or 3D-binary-data
35	! into it (different files are opened for xy-, xz-, yz-cross-sections and
36	! 3D-data). For plotting or analyzing these PE-data have to be collected and
37	! to be put into single files, which is done by this routine.
38	! Output format is NetCDF. Additionally, a data are output in a binary format
39	! readable by ISO2D-software (cross-sections) and by AVS (3D-data).
40	!
41	! This routine must be compiled with:
42	! decalpha:
43	! f95 -cpp -D__netcdf -fast -r8 -I/usr/local/netcdf-3.5.1/include
44	! -L/usr/local/netcdf-3.5.1/lib -lnetcdf
45	! IBM-Regatta:
46	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
47	! -I /aws/dataformats/netcdf-3.6.0-p1/64-32/include-64
48	! -L/aws/dataformats/netcdf-3.6.0-p1/64-32/lib -lnetcdf -O3
49	! IBM-Regatta KISTI:
50	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
51	! -I /applic/netcdf64/src/f90
52	! -L/applic/lib/NETCDF64 -lnetcdf -O3
53	! IBM-Regatta Yonsei (gfdl5):
54	! xlf95 -qsuffix=cpp=f90 -WF,-D__netcdf -qrealsize=8 -q64 -qmaxmem=-1 -Q
55	! -I /usr1/users/raasch/pub/netcdf-3.6.0-p1/include
56	! -L/usr1/users/raasch/pub/netcdf-3.6.0-p1/lib -lnetcdf -O3
57	! IMUK:
58	! ifort combine...f90 -o combine...x
59	! -cpp -D__netcdf -I /muksoft/packages/netcdf/linux/include -axW -r8 -nbs
60	! -Vaxlib -L /muksoft/packages/netcdf/linux/lib -lnetcdf
61	! NEC-SX6:
62	! sxf90 combine...f90 -o combine...x
63	! -I /pool/SX-6/netcdf/netcdf-3.6.0-p1/include -C hopt -Wf '-A idbl4'
64	! -D__netcdf -L/pool/SX-6/netcdf/netcdf-3.6.0-p1/lib -lnetcdf
65	! Sun Fire X4600
66	! pgf95 combine...f90 -o combine...x
67	! -Mpreprocess -D__netcdf -I /home/usr5/mkanda/netcdf-3.6.1/src/f90 -r8
68	! -fast -L/home/usr5/mkanda/netcdf-3.6.1/src/libsrc -lnetcdf
69	! FIMM:
70	! ifort combine...f90 -o combine...x
71	! -axW -cpp -openmp -r8 -nbs -convert little_endian -D__netcdf
72	! -I /local/netcdf/include -Vaxlib -L/local/netcdf/lib -lnetcdf
73	!------------------------------------------------------------------------------!
74
75	#if defined( __netcdf )
76	USE netcdf
77	#endif
78
79	IMPLICIT NONE
80
81	!
82	!-- Local variables
83	CHARACTER (LEN=2) :: modus, model_string
84	CHARACTER (LEN=4) :: id_string
85	CHARACTER (LEN=10) :: dimname, var_name
86	CHARACTER (LEN=40) :: filename
87
88	CHARACTER (LEN=2000), DIMENSION(0:1) :: var_list
89
90	INTEGER, PARAMETER :: spk = SELECTED_REAL_KIND( 6 )
91
92	INTEGER :: av, danz, i, id, &
93	j, model, models, nc_stat, nxa, nxag, nxe, nxeg, nya, &
94	nyag, nye, nyeg, nza, nzag, nze, nzeg, pos, time_step, xa, xe, &
95	ya, ye, za, ze
96
97	INTEGER, DIMENSION(0:1) :: current_level, current_var, fanz, id_set, &
98	id_var_time, num_var
99
100	INTEGER, DIMENSION(4) :: id_dims_loc
101
102	INTEGER, DIMENSION(0:1,4) :: id_dims
103
104	INTEGER, DIMENSION(0:1,1000) :: id_var, levels
105
106	LOGICAL :: avs_output, compressed, found, iso2d_output, netcdf_output, &
107	netcdf_0, netcdf_1
108
109	REAL :: dx, simulated_time
110	REAL, DIMENSION(:), ALLOCATABLE :: eta, ho, hu
111	REAL, DIMENSION(:,:), ALLOCATABLE :: pf
112	REAL(spk), DIMENSION(:,:,:), ALLOCATABLE :: pf3d
113
114	PRINT*, ''
115	PRINT*, ''
116	PRINT, ' combine_plot_fields *'
117
118	!
119	!-- Find out if a coupled run has been carried out
120	INQUIRE( FILE='COUPLING_PORT_OPENED', EXIST=found )
121	IF ( found ) THEN
122	models = 2
123	PRINT*, ' coupled run'
124	ELSE
125	models = 1
126	PRINT*, ' uncoupled run'
127	ENDIF
128
129	!
130	!-- Do everything for each model
131	DO model = 1, models
132	!
133	!-- Set the model string used to identify the filenames
134	model_string = ''
135	IF ( models == 2 ) THEN
136	PRINT*, ''
137	PRINT, ' combine_plot_fields *'
138	IF ( model == 2 ) THEN
139	model_string = '_O'
140	PRINT*, ' now combining ocean data'
141	PRINT*, ' ========================'
142	ELSE
143	PRINT*, ' now combining atmosphere data'
144	PRINT*, ' ============================='
145	ENDIF
146	ENDIF
147	!
148	!-- 2D-arrays for ISO2D
149	!-- Main loop for the three different cross-sections, starting with
150	!-- xy-section
151	modus = 'XY'
152	PRINT*, ''
153	DO WHILE ( modus == 'XY' .OR. modus == 'XZ' .OR. modus == 'YZ' )
154	!
155	!-- Check, if file from PE0 exists. If it does not exist, PALM did not
156	!-- create any output for this cross-section.
157	danz = 0
158	WRITE (id_string,'(I4.4)') danz
159	INQUIRE ( &
160	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
161	EXIST=found )
162	!
163	!-- Find out the number of files (equal to the number of PEs which
164	!-- have been used in PALM) and open them
165	DO WHILE ( found )
166
167	OPEN ( danz+110, &
168	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
169	FORM='UNFORMATTED' )
170	danz = danz + 1
171	WRITE (id_string,'(I4.4)') danz
172	INQUIRE ( &
173	FILE='PLOT2D_'//modus//TRIM( model_string )//'_'//id_string, &
174	EXIST=found )
175
176	ENDDO
177
178	!
179	!-- Inquire whether an iso2d parameter file exists
180	INQUIRE( FILE='PLOT2D_'//modus//'_GLOBAL'//TRIM( model_string ), &
181	EXIST=iso2d_output )
182
183	!
184	!-- Inquire whether a NetCDF file exists
185	INQUIRE( FILE='DATA_2D_'//modus//'_NETCDF'//TRIM( model_string ), &
186	EXIST=netcdf_0 )
187
188	!
189	!-- Inquire whether a NetCDF file for time-averaged data exists
190	INQUIRE( FILE='DATA_2D_'//modus//'_AV_NETCDF'//TRIM( model_string ),&
191	EXIST=netcdf_1 )
192
193	IF ( netcdf_0 .OR. netcdf_1 ) THEN
194	netcdf_output = .TRUE.
195	ELSE
196	netcdf_output = .FALSE.
197	ENDIF
198
199	!
200	!-- Info-output
201	PRINT*, ''
202	PRINT, ' combine_plot_fields *'
203	#if defined( __netcdf )
204	IF ( netcdf_output ) PRINT*, ' NetCDF output enabled'
205	#else
206	IF ( netcdf_output ) THEN
207	PRINT*, '--- Sorry, no NetCDF support on this host'
208	netcdf_output = .FALSE.
209	ENDIF
210	#endif
211	IF ( danz /= 0 ) THEN
212	PRINT*, ' ',modus,'-section: ', danz, ' file(s) found'
213	ELSE
214	PRINT*, ' no ', modus, '-section data available'
215	ENDIF
216
217	IF ( netcdf_output .AND. danz /= 0 ) THEN
218	#if defined( __netcdf )
219	DO av = 0, 1
220
221	IF ( av == 0 .AND. .NOT. netcdf_0 ) CYCLE
222	IF ( av == 1 .AND. .NOT. netcdf_1 ) CYCLE
223
224	!
225	!-- Open NetCDF dataset
226	IF ( av == 0 ) THEN
227	filename = 'DATA_2D_'//modus//'_NETCDF' &
228	//TRIM( model_string )
229	ELSE
230	filename = 'DATA_2D_'//modus//'_AV_NETCDF' &
231	//TRIM( model_string )
232	ENDIF
233	nc_stat = NF90_OPEN( filename, NF90_WRITE, id_set(av) )
234	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 1 )
235
236	!
237	!-- Get the list of variables (order of variables corresponds with
238	!-- the order of data on the binary file)
239	var_list(av) = ' ' ! GET_ATT does not assign trailing blanks
240	nc_stat = NF90_GET_ATT( id_set(av), NF90_GLOBAL, 'VAR_LIST', &
241	var_list(av) )
242	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 2 )
243
244	!
245	!-- Inquire id of the time coordinate variable
246	nc_stat = NF90_INQ_VARID( id_set(av), 'time', id_var_time(av) )
247	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 3 )
248
249	!
250	!-- Count number of variables; there is one more semicolon in the
251	!-- string than variable names
252	num_var(av) = -1
253	DO i = 1, LEN( var_list(av) )
254	IF ( var_list(av)(i:i) == ';' ) num_var(av) = num_var(av) +1
255	ENDDO
256
257	!
258	!-- Extract the variable names from the list and inquire their
259	!-- NetCDF IDs
260	pos = INDEX( var_list(av), ';' )
261	!
262	!-- Loop over all variables
263	DO i = 1, num_var(av)
264
265	!
266	!-- Extract variable name from list
267	var_list(av) = var_list(av)(pos+1:)
268	pos = INDEX( var_list(av), ';' )
269	var_name = var_list(av)(1:pos-1)
270
271	!
272	!-- Get variable ID from name
273	nc_stat = NF90_INQ_VARID( id_set(av), TRIM( var_name ), &
274	id_var(av,i) )
275	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 4 )
276
277	!
278	!-- Get number of x/y/z levels for that variable
279	nc_stat = NF90_INQUIRE_VARIABLE( id_set(av), id_var(av,i), &
280	dimids = id_dims_loc )
281	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 5 )
282	id_dims(av,:) = id_dims_loc
283
284	!
285	!-- Inquire dimension ID
286	DO j = 1, 4
287	nc_stat = NF90_INQUIRE_DIMENSION( id_set(av), &
288	id_dims(av,j), dimname, levels(av,i) )
289	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 6 )
290
291	IF ( modus == 'XY' .AND. INDEX(dimname, 'z') /= 0 ) EXIT
292	IF ( modus == 'XZ' .AND. INDEX(dimname, 'y') /= 0 ) EXIT
293	IF ( modus == 'YZ' .AND. INDEX(dimname, 'x') /= 0 ) EXIT
294	ENDDO
295
296	ENDDO
297
298	ENDDO ! av = 0, 1
299
300	ENDIF
301	#endif
302
303	!
304	!-- Read the arrays, as long as the end of the file is reached
305	fanz = 0
306	current_level = 1
307	current_var = 999999999
308
309	DO WHILE ( danz /= 0 )
310
311	!
312	!-- Loop over all files (reading data of the subdomains)
313	DO id = 0, danz-1
314	!
315	!-- File from PE0 contains special information at the beginning,
316	!-- concerning the lower and upper indices of the total-domain used
317	!-- in PALM (nxag, nxeg, nyag, nyeg) and the lower and upper indices
318	!-- of the array to be writte by this routine (nxa, nxe, nya,
319	!-- nye). Usually in the horizontal directions nxag=-1 and nxa=0
320	!-- while all other variables have the same value (i.e. nxeg=nxe).
321	!-- Allocate necessary arrays, open the output file and write
322	!-- the coordinate informations needed by ISO2D.
323	IF ( id == 0 .AND. fanz(0) == 0 .AND. fanz(1) == 0 ) THEN
324	READ ( id+110 ) nxag, nxeg, nyag, nyeg
325	READ ( id+110 ) nxa, nxe, nya, nye
326	ALLOCATE ( eta(nya:nye), ho(nxa:nxe), hu(nxa:nxe), &
327	pf(nxag:nxeg,nyag:nyeg) )
328	READ ( id+110 ) dx, eta, hu, ho
329
330	IF ( iso2d_output ) THEN
331	OPEN ( 2, FILE='PLOT2D_'//modus//TRIM( model_string ), &
332	FORM='UNFORMATTED' )
333	WRITE ( 2 ) dx, eta, hu, ho
334	ENDIF
335	ENDIF
336	!
337	!-- Read output time
338	IF ( netcdf_output .AND. id == 0 ) THEN
339	IF ( netcdf_1 ) THEN
340	READ ( id+110, END=998 ) simulated_time, time_step, av
341	ELSE
342	!
343	!-- For compatibility with earlier PALM versions
344	READ ( id+110, END=998 ) simulated_time, time_step
345	av = 0
346	ENDIF
347	ENDIF
348	!
349	!-- Read subdomain indices
350	READ ( id+110, END=998 ) xa, xe, ya, ye
351	!
352	!-- IF the PE made no output (in case that no part of the
353	!-- cross-section is situated on this PE), indices have the
354	!-- value -1
355	IF ( .NOT. ( xa == -1 .AND. xe == -1 .AND. &
356	ya == -1 .AND. ye == -1 ) ) THEN
357	!
358	!-- Read the subdomain grid-point values
359	READ ( id+110 ) pf(xa:xe,ya:ye)
360	ENDIF
361	IF ( id == 0 ) fanz(av) = fanz(av) + 1
362
363	ENDDO
364	!
365	!-- Write the data of the total domain cross-section
366	IF ( iso2d_output ) WRITE ( 2 ) pf(nxa:nxe,nya:nye)
367
368	!
369	!-- Write same data in NetCDF format
370	IF ( netcdf_output ) THEN
371	#if defined( __netcdf )
372	!
373	!-- Check if a new time step has begun; if yes write data to time
374	!-- axis
375	IF ( current_var(av) > num_var(av) ) THEN
376	current_var(av) = 1
377	nc_stat = NF90_PUT_VAR( id_set(av), id_var_time(av), &
378	(/ simulated_time /), &
379	start = (/ time_step /), &
380	count = (/ 1 /) )
381	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 7 )
382	ENDIF
383
384	!
385	!-- Now write the data; this is mode dependent
386	SELECT CASE ( modus )
387
388	CASE ( 'XY' )
389	nc_stat = NF90_PUT_VAR( id_set(av), &
390	id_var(av,current_var(av)), &
391	pf(nxa:nxe,nya:nye), &
392	start = (/ 1, 1, current_level(av), time_step /), &
393	count = (/ nxe-nxa+1, nye-nya+1, 1, 1 /) )
394	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 8)
395
396	CASE ( 'XZ' )
397	nc_stat = NF90_PUT_VAR( id_set(av), &
398	id_var(av,current_var(av)), &
399	pf(nxa:nxe,nya:nye), &
400	start = (/ 1, current_level(av), 1, time_step /), &
401	count = (/ nxe-nxa+1, 1, nye-nya+1, 1 /) )
402	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 9)
403
404	CASE ( 'YZ' )
405	nc_stat = NF90_PUT_VAR( id_set(av), &
406	id_var(av,current_var(av)), &
407	pf(nxa:nxe,nya:nye), &
408	start = (/ current_level(av), 1, 1, time_step /), &
409	count = (/ 1, nxe-nxa+1, nye-nya+1, 1 /) )
410	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error(10)
411
412	END SELECT
413
414	!
415	!-- Data is written, check if max level is reached
416	current_level(av) = current_level(av) + 1
417	IF ( current_level(av) > levels(av,current_var(av)) ) THEN
418	current_level(av) = 1
419	current_var(av) = current_var(av) + 1
420	ENDIF
421
422	ENDIF
423	#endif
424
425	ENDDO
426
427	998 IF ( danz /= 0 ) THEN
428	!
429	!-- Print the number of the arrays processed
430	WRITE (*,'(16X,I4,A)') fanz(0)+fanz(1), ' array(s) processed'
431	IF ( fanz(1) /= 0 ) THEN
432	WRITE (*,'(16X,I4,A)') fanz(1), ' array(s) are time-averaged'
433	ENDIF
434
435	!
436	!-- Close all files and deallocate arrays
437	DO id = 0, danz-1
438	CLOSE ( id+110 )
439	ENDDO
440	CLOSE ( 2 )
441	DEALLOCATE ( eta, ho, hu, pf )
442	ENDIF
443
444	!
445	!-- Close the NetCDF file
446	IF ( netcdf_output .AND. danz /= 0 ) THEN
447	#if defined( __netcdf )
448	IF ( netcdf_0 ) THEN
449	nc_stat = NF90_CLOSE( id_set(0) )
450	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 11 )
451	ENDIF
452	IF ( netcdf_1 ) THEN
453	nc_stat = NF90_CLOSE( id_set(1) )
454	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 12 )
455	ENDIF
456	#endif
457	ENDIF
458
459	!
460	!-- Choose the next cross-section
461	SELECT CASE ( modus )
462	CASE ( 'XY' )
463	modus = 'XZ'
464	CASE ( 'XZ' )
465	modus = 'YZ'
466	CASE ( 'YZ' )
467	modus = 'no'
468	END SELECT
469
470	ENDDO
471
472
473	!
474	!-- Combine the 3D-arrays
475
476	!
477	!-- Inquire whether an avs fld file exists
478	INQUIRE( FILE='PLOT3D_FLD'//TRIM( model_string ), EXIST=avs_output )
479
480	!
481	!-- Inquire whether a NetCDF file exists
482	INQUIRE( FILE='DATA_3D_NETCDF'//TRIM( model_string ), EXIST=netcdf_0 )
483
484	!
485	!-- Inquire whether a NetCDF file for time-averaged data exists
486	INQUIRE( FILE='DATA_3D_AV_NETCDF'//TRIM( model_string ), EXIST=netcdf_1 )
487
488	IF ( netcdf_0 .OR. netcdf_1 ) THEN
489	netcdf_output = .TRUE.
490	ELSE
491	netcdf_output = .FALSE.
492	ENDIF
493
494	!
495	!-- Check, if file from PE0 exists
496	danz = 0
497	WRITE (id_string,'(I4.4)') danz
498	INQUIRE ( &
499	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM( id_string ), &
500	EXIST=found )
501
502	!
503	!-- Combination only works, if data are not compressed. In that case,
504	!-- PALM created a flag file (PLOT3D_COMPRESSED)
505	INQUIRE ( FILE='PLOT3D_COMPRESSED'//TRIM( model_string ), &
506	EXIST=compressed )
507
508	!
509	!-- Find out the number of files and open them
510	DO WHILE ( found .AND. .NOT. compressed )
511
512	OPEN ( danz+110, &
513	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM(id_string), &
514	FORM='UNFORMATTED')
515	danz = danz + 1
516	WRITE (id_string,'(I4.4)') danz
517	INQUIRE ( &
518	FILE='PLOT3D_DATA'//TRIM( model_string )//'_'//TRIM(id_string), &
519	EXIST=found )
520
521	ENDDO
522
523	!
524	!-- Info-output
525	PRINT*, ' '
526	PRINT, ' combine_plot_fields *'
527	#if defined( __netcdf )
528	IF ( netcdf_output ) PRINT*, ' NetCDF output enabled'
529	#else
530	IF ( netcdf_output ) THEN
531	PRINT*, '--- Sorry, no NetCDF support on this host'
532	netcdf_output = .FALSE.
533	ENDIF
534	#endif
535	IF ( danz /= 0 ) THEN
536	PRINT*, ' 3D-data: ', danz, ' file(s) found'
537	ELSE
538	IF ( found .AND. compressed ) THEN
539	PRINT*, '+++ no 3D-data processing, since data are compressed'
540	ELSE
541	PRINT*, ' no 3D-data file available'
542	ENDIF
543	ENDIF
544
545	IF ( netcdf_output .AND. danz /= 0 ) THEN
546	#if defined( __netcdf )
547	DO av = 0, 1
548
549	IF ( av == 0 .AND. .NOT. netcdf_0 ) CYCLE
550	IF ( av == 1 .AND. .NOT. netcdf_1 ) CYCLE
551
552	!
553	!-- Open NetCDF dataset
554	IF ( av == 0 ) THEN
555	filename = 'DATA_3D_NETCDF'//TRIM( model_string )
556	ELSE
557	filename = 'DATA_3D_AV_NETCDF'//TRIM( model_string )
558	ENDIF
559	nc_stat = NF90_OPEN( filename, NF90_WRITE, id_set(av) )
560	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 13 )
561
562
563	!
564	!-- Get the list of variables (order of variables corresponds with the
565	!-- order of data on the binary file)
566	var_list(av) = ' ' ! GET_ATT does not assign trailing blanks
567	nc_stat = NF90_GET_ATT( id_set(av), NF90_GLOBAL, 'VAR_LIST', &
568	var_list(av) )
569	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 14 )
570
571	!
572	!-- Inquire id of the time coordinate variable
573	nc_stat = NF90_INQ_VARID( id_set(av), 'time', id_var_time(av) )
574	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 15 )
575
576	!
577	!-- Count number of variables; there is one more semicolon in the
578	!-- string than variable names
579	num_var(av) = -1
580	DO i = 1, LEN( var_list(av) )
581	IF ( var_list(av)(i:i) == ';' ) num_var(av) = num_var(av) + 1
582	ENDDO
583
584	!
585	!-- Extract the variable names from the list and inquire their NetCDF
586	!-- IDs
587	pos = INDEX( var_list(av), ';' )
588	!
589	!-- Loop over all variables
590	DO i = 1, num_var(av)
591
592	!
593	!-- Extract variable name from list
594	var_list(av) = var_list(av)(pos+1:)
595	pos = INDEX( var_list(av), ';' )
596	var_name = var_list(av)(1:pos-1)
597
598	!
599	!-- Get variable ID from name
600	! print, '** find id for "',TRIM( var_name ),'" begin'
601	nc_stat = NF90_INQ_VARID( id_set(av), TRIM( var_name ), &
602	id_var(av,i) )
603	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 16 )
604	! print, '** find id for "',TRIM( var_name ),'" end'
605
606	ENDDO
607
608	ENDDO ! av=0,1
609
610	ENDIF
611	#endif
612
613	!
614	!-- Read arrays, until the end of the file is reached
615	current_var = 999999999
616	fanz = 0
617	DO WHILE ( danz /= 0 )
618
619	!
620	!-- Loop over all files
621	DO id = 0, danz-1
622	!
623	!-- File from PE0 contains special information at the beginning,
624	!-- concerning the lower and upper indices of the total-domain used in
625	!-- PALM (nxag, nxeg, nyag, nyeg, nzag, nzeg) and the lower and upper
626	!-- indices of the array to be written by this routine (nxa, nxe, nya,
627	!-- nye, nza, nze). Usually nxag=-1 and nxa=0, nyag=-1 and nya=0,
628	!-- nzeg=nz and nze=nz_plot3d.
629	!-- Allocate necessary array and open the output file.
630	IF ( id == 0 .AND. fanz(0) == 0 .AND. fanz(1) == 0 ) THEN
631	READ ( id+110 ) nxag, nxeg, nyag, nyeg, nzag, nzeg
632	READ ( id+110 ) nxa, nxe, nya, nye, nza, nze
633	ALLOCATE ( pf3d(nxag:nxeg,nyag:nyeg,nzag:nzeg) )
634	IF ( avs_output ) THEN
635	OPEN ( 2, FILE='PLOT3D_DATA'//TRIM( model_string ), &
636	FORM='UNFORMATTED' )
637	ENDIF
638	ENDIF
639
640	!
641	!-- Read output time
642	IF ( netcdf_output .AND. id == 0 ) THEN
643	IF ( netcdf_1 ) THEN
644	READ ( id+110, END=999 ) simulated_time, time_step, av
645	ELSE
646	!
647	!-- For compatibility with earlier PALM versions
648	READ ( id+110, END=999 ) simulated_time, time_step
649	av = 0
650	ENDIF
651	ENDIF
652
653	!
654	!-- Read subdomain indices and grid point values
655	READ ( id+110, END=999 ) xa, xe, ya, ye, za, ze
656	READ ( id+110 ) pf3d(xa:xe,ya:ye,za:ze)
657	IF ( id == 0 ) fanz(av) = fanz(av) + 1
658
659	ENDDO
660
661	!
662	!-- Write data of the total domain
663	IF ( avs_output ) WRITE ( 2 ) pf3d(nxa:nxe,nya:nye,nza:nze)
664
665	!
666	!-- Write same data in NetCDF format
667	IF ( netcdf_output ) THEN
668	#if defined( __netcdf )
669	!
670	!-- Check if a new time step has begun; if yes write data to time axis
671	IF ( current_var(av) > num_var(av) ) THEN
672	current_var(av) = 1
673	nc_stat = NF90_PUT_VAR( id_set(av), id_var_time(av), &
674	(/ simulated_time /),&
675	start = (/ time_step /), count = (/ 1 /) )
676	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 17 )
677	ENDIF
678
679	!
680	!-- Now write the data
681	nc_stat = NF90_PUT_VAR( id_set(av), id_var(av,current_var(av)), &
682	pf3d(nxa:nxe,nya:nye,nza:nze), &
683	start = (/ 1, 1, 1, time_step /), &
684	count = (/ nxe-nxa+1, nye-nya+1, nze-nza+1, 1 /) )
685	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 18 )
686
687	current_var(av) = current_var(av) + 1
688
689	#endif
690	ENDIF
691
692	ENDDO
693
694	999 IF ( danz /= 0 ) THEN
695	!
696	!-- Print the number of arrays processed
697	WRITE (*,'(16X,I4,A)') fanz(0)+fanz(1), ' array(s) processed'
698	IF ( fanz(1) /= 0 ) THEN
699	WRITE (*,'(16X,I4,A)') fanz(1), ' array(s) are time-averaged'
700	ENDIF
701	!
702	!-- Close all files and deallocate array
703	DO id = 0, danz-1
704	CLOSE ( id+110 )
705	ENDDO
706	CLOSE ( 2 )
707	DEALLOCATE ( pf3d )
708	!
709	!-- Close the NetCDF file
710	IF ( netcdf_output ) THEN
711	#if defined( __netcdf )
712	IF ( netcdf_0 ) THEN
713	nc_stat = NF90_CLOSE( id_set(0) )
714	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 19 )
715	ENDIF
716	IF ( netcdf_1 ) THEN
717	nc_stat = NF90_CLOSE( id_set(1) )
718	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 20 )
719	ENDIF
720	#endif
721	ENDIF
722	ENDIF
723
724	ENDDO ! models
725
726
727	CONTAINS
728
729
730	SUBROUTINE handle_netcdf_error( errno )
731	!
732	!-- Prints out a text message corresponding to the current NetCDF status
733
734	IMPLICIT NONE
735
736	INTEGER, INTENT(IN) :: errno
737
738	IF ( nc_stat /= NF90_NOERR ) THEN
739	PRINT*, '+++ combine_plot_fields netcdf: ', av, errno, &
740	TRIM( nf90_strerror( nc_stat ) )
741	ENDIF
742
743	END SUBROUTINE handle_netcdf_error
744
745
746	END PROGRAM combine_plot_fields
747
748
749

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source: palm/trunk/UTIL/combine_plot_fields.f90 @ 158

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