1 | /****************************************************************************** |
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2 | |
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3 | KPP - The Kinetic PreProcessor |
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4 | Builds simulation code for chemical kinetic systems |
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5 | |
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6 | Copyright (C) 1995-1996 Valeriu Damian and Adrian Sandu |
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7 | Copyright (C) 1997-2005 Adrian Sandu |
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8 | |
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9 | KPP is free software; you can redistribute it and/or modify it under the |
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10 | terms of the GNU General Public License as published by the Free Software |
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11 | Foundation (http://www.gnu.org/copyleft/gpl.html); either version 2 of the |
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12 | License, or (at your option) any later version. |
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13 | |
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14 | KPP is distributed in the hope that it will be useful, but WITHOUT ANY |
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15 | WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS |
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16 | FOR A PARTICULAR PURPOSE. See the GNU General Public License for more |
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17 | details. |
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18 | |
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19 | You should have received a copy of the GNU General Public License along |
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20 | with this program; if not, consult http://www.gnu.org/copyleft/gpl.html or |
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21 | write to the Free Software Foundation, Inc., 59 Temple Place - Suite 330, |
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22 | Boston, MA 02111-1307, USA. |
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23 | |
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24 | Adrian Sandu |
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25 | Computer Science Department |
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26 | Virginia Polytechnic Institute and State University |
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27 | Blacksburg, VA 24060 |
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28 | E-mail: sandu@cs.vt.edu |
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29 | |
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30 | ******************************************************************************/ |
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31 | |
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32 | |
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33 | #include "gdata.h" |
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34 | #include "code.h" |
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35 | #include <string.h> |
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36 | |
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37 | #define MAX_LINE 120 |
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38 | #define LINE_LENGTH 70 |
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39 | |
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40 | int fncPrototipe = 0; |
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41 | |
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42 | char *C_types[] = { "void", /* VOID */ |
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43 | "int", /* INT */ |
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44 | "float", /* FLOAT */ |
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45 | "double", /* DOUBLE */ |
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46 | "char *", /* STRING */ |
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47 | "char *" /* DOUBLESTRING */ |
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48 | }; |
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49 | |
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50 | void C_WriteElm( NODE * n ) |
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51 | { |
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52 | ELEMENT *elm; |
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53 | char * name; |
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54 | char maxi[20]; |
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55 | char maxj[20]; |
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56 | |
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57 | elm = n->elm; |
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58 | name = varTable[ elm->var ]->name; |
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59 | |
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60 | switch( n->type ) { |
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61 | case CONST: bprintf("%g", elm->val.cnst); |
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62 | break; |
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63 | case ELM: bprintf("%s", name); |
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64 | break; |
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65 | case VELM: if( elm->val.idx.i >= 0 ) sprintf( maxi, "%d", elm->val.idx.i ); |
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66 | else sprintf( maxi, "%s", varTable[ -elm->val.idx.i ]->name ); |
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67 | bprintf("%s[%s]", name, maxi ); |
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68 | break; |
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69 | case MELM: if( elm->val.idx.i >= 0 ) sprintf( maxi, "%d", elm->val.idx.i ); |
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70 | else sprintf( maxi, "%s", varTable[ -elm->val.idx.i ]->name ); |
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71 | if( elm->val.idx.j >= 0 ) sprintf( maxj, "%d", elm->val.idx.j ); |
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72 | else sprintf( maxj, "%s", varTable[ -elm->val.idx.j ]->name ); |
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73 | bprintf("%s[%s][%s]", name, maxi, maxj ); |
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74 | break; |
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75 | case EELM: bprintf("(%s)", elm->val.expr ); |
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76 | break; |
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77 | } |
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78 | } |
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79 | |
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80 | void C_WriteSymbol( int op ) |
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81 | { |
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82 | switch( op ) { |
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83 | case ADD: bprintf("+"); |
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84 | AllowBreak(); |
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85 | break; |
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86 | case SUB: bprintf("-"); |
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87 | AllowBreak(); |
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88 | break; |
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89 | case MUL: bprintf("*"); |
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90 | AllowBreak(); |
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91 | break; |
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92 | case DIV: bprintf("/"); |
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93 | AllowBreak(); |
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94 | break; |
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95 | case POW: bprintf("power"); |
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96 | break; |
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97 | case O_PAREN: bprintf("("); |
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98 | AllowBreak(); |
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99 | break; |
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100 | case C_PAREN: bprintf(")"); |
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101 | break; |
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102 | case NONE: |
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103 | break; |
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104 | } |
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105 | } |
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106 | |
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107 | void C_WriteAssign( char *ls, char *rs ) |
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108 | { |
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109 | int start; |
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110 | int crtident; |
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111 | int linelg; |
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112 | int i,j; |
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113 | char c; |
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114 | int first; |
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115 | int number_of_lines = 1, MAX_NO_OF_LINES = 99; |
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116 | int ifound, jfound; |
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117 | |
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118 | /* Operator Mapping: 0xaa = '*' | 0xab = '+' | 0xac = ',' |
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119 | 0xad = '-' | 0xae ='.' | 0xaf = '/' */ |
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120 | /* char op_mult=0xaa, op_plus=0xab, op_minus=0xad, op_dot=0xae, op_div=0xaf; */ |
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121 | char op_mult='*', op_plus='+', op_minus='-', op_dot='.', op_div='/'; |
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122 | |
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123 | crtident = 2 + ident * 2; |
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124 | bprintf("%*s%s = ", crtident, "", ls); |
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125 | start = strlen( ls ) + crtident + 2; |
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126 | linelg = LINE_LENGTH - start; |
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127 | |
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128 | first = 1; |
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129 | while( strlen(rs) > linelg ) { |
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130 | ifound = 0; jfound = 0; |
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131 | if ( number_of_lines >= MAX_NO_OF_LINES ) {/* if a new line needs to be started */ |
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132 | for( j=linelg; j>5; j-- ) /* split row here if +, -, or comma */ |
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133 | if ( ( rs[j] == op_plus )||( rs[j] == op_minus )||( rs[j]==',' ) ) { |
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134 | jfound = 1; i=j; break; |
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135 | } |
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136 | } |
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137 | if ( ( number_of_lines < MAX_NO_OF_LINES )||( !jfound ) ) { |
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138 | for( i=linelg; i>10; i-- ) /* split row here if operator or comma */ |
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139 | if ( ( rs[i] & 0x80 )||( rs[i]==',' ) ) { |
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140 | ifound = 1; break; |
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141 | } |
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142 | if( i <= 10 ) { |
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143 | printf("\n Warning: possible error in continuation lines for %s = ...",ls); |
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144 | i = linelg; |
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145 | } |
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146 | } |
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147 | while ( rs[i-1] & 0x80 ) i--; /* put all operators on the next row */ |
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148 | while ( rs[i] == ',' ) i++; /* put commas on the current row */ |
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149 | |
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150 | /*for( i=linelg; i>10; i-- ) |
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151 | if( ( rs[i] & 0x80 ) || ( rs[i] == ',' ) ) |
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152 | break; |
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153 | if( i < 10 ) { |
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154 | printf("\nPossible error when cutting lines"); |
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155 | i = linelg; |
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156 | }*/ |
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157 | |
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158 | c = rs[i]; |
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159 | rs[i] = 0; |
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160 | if ( first ) { |
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161 | bprintf("%s", rs ); |
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162 | linelg++; |
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163 | first = 0; |
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164 | } else { |
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165 | bprintf("\n%*s%s", start, "", rs ); |
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166 | if ( jfound ) { |
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167 | bprintf(";\n%*s%s = %s", crtident, "", ls, ls); |
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168 | number_of_lines = 1; |
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169 | } |
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170 | } |
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171 | rs[i] = c; |
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172 | rs += i; |
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173 | number_of_lines++; |
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174 | } |
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175 | |
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176 | if ( number_of_lines > MAX_NO_OF_LINES ) |
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177 | printf("\n Warning: many continuation lines (%d) for %s = ...",number_of_lines,ls); |
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178 | |
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179 | if ( first ) bprintf("%s;\n", rs ); |
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180 | else bprintf("\n%*s%s;\n", start, "", rs ); |
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181 | |
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182 | FlushBuf(); |
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183 | } |
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184 | |
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185 | void C_WriteComment( char *fmt, ... ) |
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186 | { |
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187 | Va_list args; |
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188 | char buf[ MAX_LINE ]; |
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189 | |
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190 | Va_start( args, fmt ); |
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191 | vsprintf( buf, fmt, args ); |
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192 | va_end( args ); |
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193 | |
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194 | bprintf( "/* %-*s */\n", LINE_LENGTH - 6, buf ); |
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195 | |
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196 | FlushBuf(); |
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197 | } |
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198 | |
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199 | |
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200 | char * C_Decl( int v ) |
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201 | { |
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202 | static char buf[120]; |
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203 | VARIABLE *var; |
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204 | char *baseType; |
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205 | char maxi[20]; |
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206 | char maxj[20]; |
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207 | |
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208 | var = varTable[ v ]; |
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209 | baseType = C_types[ var->baseType ]; |
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210 | |
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211 | *buf = 0; |
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212 | |
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213 | switch( var->type ) { |
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214 | case ELM: |
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215 | sprintf( buf, "%s %s", baseType, var->name ); |
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216 | break; |
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217 | case VELM: |
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218 | if( var->maxi > 0 ) sprintf( maxi, "%d", var->maxi ); |
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219 | if( var->maxi == 0 ) sprintf( maxi, "%d", 1 ); |
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220 | /* else sprintf( maxi, "%s", varTable[ -var->maxi ]->name); */ |
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221 | if ( var->maxi < 0 ) { |
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222 | if (varTable[ -var->maxi ]->value < 0) |
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223 | sprintf( maxi, "%s", varTable[ -var->maxi ]->name ); |
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224 | else |
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225 | sprintf( maxi, "%d", (varTable[-var->maxi]->value)==0? |
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226 | 1:varTable[-var->maxi]->value ); |
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227 | } |
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228 | /*if( (var->maxi == 0) || |
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229 | ((var->maxi < 0) && (varTable[ -var->maxi ]->maxi == 0)) ) |
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230 | sprintf( maxi, "%s+1", maxi );*/ |
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231 | if( fncPrototipe ) |
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232 | sprintf( buf, "%s %s[]", baseType, var->name ); |
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233 | else |
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234 | sprintf( buf, "%s %s[%s]", baseType, var->name, maxi ); |
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235 | break; |
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236 | case MELM: |
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237 | if( var->maxi > 0 ) sprintf( maxi, "%d", var->maxi ); |
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238 | else { |
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239 | if (varTable[ -var->maxi ]->value < 0) |
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240 | sprintf( maxi, "%s", varTable[ -var->maxi ]->name ); |
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241 | else |
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242 | sprintf( maxi, "%d", (varTable[-var->maxi]->value)==0? |
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243 | 1:varTable[-var->maxi]->value ); |
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244 | } |
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245 | /* if( (var->maxi == 0) || |
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246 | ((var->maxi < 0) && (varTable[ -var->maxi ]->maxi == 0)) ) |
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247 | strcat( maxi, "+1"); */ |
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248 | if( var->maxj > 0 ) sprintf( maxj, "%d", var->maxj ); |
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249 | else { |
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250 | if (varTable[ -var->maxj ]->value < 0) |
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251 | sprintf( maxj, "%s", varTable[ -var->maxj ]->name ); |
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252 | else |
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253 | sprintf( maxj, "%d", (varTable[-var->maxj]->value)==0? |
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254 | 1:varTable[-var->maxj]->value ); |
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255 | } |
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256 | if( fncPrototipe ) |
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257 | sprintf( buf, "%s %s[][]", baseType, var->name ); |
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258 | else |
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259 | sprintf( buf, "%s %s[%s][%s]", |
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260 | baseType, var->name, maxi, maxj ); |
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261 | break; |
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262 | default: |
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263 | Message( "Can not declare type %d", var->type ); |
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264 | Message( "v = %d", v ); |
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265 | break; |
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266 | } |
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267 | return buf; |
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268 | } |
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269 | |
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270 | void C_Declare( int v ) |
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271 | { |
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272 | bprintf("%-40s", strcat( C_Decl(v), ";" ) ); |
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273 | if( varTable[ v ]->comment ) |
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274 | bprintf(" /* %s */\n", varTable[ v ]->comment ); |
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275 | else |
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276 | bprintf("\n"); |
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277 | |
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278 | FlushBuf(); |
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279 | } |
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280 | |
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281 | void C_ExternDeclare( int v ) |
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282 | { |
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283 | bprintf("extern %-40s", strcat( C_Decl(v), ";" ) ); |
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284 | if( varTable[ v ]->comment ) |
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285 | bprintf(" /* %s */\n", varTable[ v ]->comment ); |
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286 | else |
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287 | bprintf("\n"); |
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288 | |
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289 | FlushBuf(); |
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290 | } |
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291 | |
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292 | void C_GlobalDeclare( int v ) |
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293 | { |
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294 | C_Declare( v ); |
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295 | } |
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296 | |
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297 | void C_InitDeclare( int v, int n, void * values ) |
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298 | { |
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299 | int i; |
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300 | VARIABLE *var; |
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301 | int * ival; |
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302 | double * dval; |
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303 | char ** cval; |
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304 | int maxCols = MAX_COLS; |
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305 | |
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306 | var = varTable[ v ]; |
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307 | ival = (int*) values; |
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308 | dval = (double*) values; |
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309 | cval = (char**) values; |
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310 | |
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311 | if( var->comment ) |
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312 | bprintf(" /* %s */\n\n", var->comment ); |
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313 | |
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314 | switch( var->type ) { |
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315 | case VELM: bprintf( " %s %s[] = {\n%5s", C_types[var->baseType], var->name, " " ); |
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316 | for( i = 0; i < n; i++ ) { |
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317 | switch( var->baseType ) { |
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318 | case INT: bprintf( "%3d", ival[i] ); maxCols=12; break; |
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319 | case DOUBLE: |
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320 | case REAL:bprintf( "%5lg", dval[i] ); maxCols=8; break; |
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321 | case STRING:bprintf( "\"%s\"", cval[i] ); maxCols=8; break; |
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322 | case DOUBLESTRING:bprintf( "\"%s\"", cval[i] ); maxCols=1; break; |
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323 | } |
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324 | if( i < n-1 ) bprintf( "," ); |
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325 | if( (i+1) % maxCols == 0 ) bprintf( "\n%5s", " " ); |
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326 | } |
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327 | if( n == 0 ) bprintf( "0" ); |
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328 | bprintf( " }; \n\n" ); |
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329 | break; |
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330 | |
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331 | case ELM: bprintf( " %s %s = ", C_types[var->baseType], var->name ); |
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332 | switch( var->baseType ) { |
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333 | case INT: bprintf( "%d", *ival ); break; |
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334 | case DOUBLE: |
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335 | case REAL:bprintf( "%lg", *dval ); break; |
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336 | case STRING:bprintf( "\"%s\"", *cval ); break; |
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337 | case DOUBLESTRING:bprintf( "\"%s\"", *cval ); break; |
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338 | } |
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339 | bprintf( ";\n\n" ); |
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340 | break; |
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341 | |
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342 | default: printf( "\n Function not defined !\n" ); |
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343 | break; |
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344 | } |
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345 | |
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346 | FlushBuf(); |
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347 | } |
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348 | |
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349 | void C_DeclareConstant( int v, char *val ) |
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350 | { |
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351 | VARIABLE *var; |
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352 | int ival; |
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353 | char dummy_val[100]; /* used just to avoid strange behaviour of |
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354 | sscanf when compiled with gcc */ |
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355 | |
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356 | strcpy(dummy_val,val);val = dummy_val; |
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357 | |
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358 | var = varTable[ v ]; |
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359 | |
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360 | if( sscanf(val, "%d", &ival) == 1 ) |
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361 | if( ival == 0 ) var->maxi = 0; |
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362 | else var->maxi = 1; |
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363 | else |
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364 | var->maxi = -1; |
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365 | |
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366 | switch( var->type ) { |
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367 | case CONST: bprintf("#define %-20s %-10s ", var->name, val ); |
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368 | break; |
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369 | default: |
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370 | printf( "Invalid constant", var->type ); |
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371 | break; |
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372 | } |
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373 | if( varTable[ v ]->comment ) |
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374 | bprintf(" /* %s */\n", varTable[ v ]->comment ); |
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375 | else |
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376 | bprintf("\n"); |
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377 | |
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378 | FlushBuf(); |
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379 | } |
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380 | |
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381 | void C_FunctionStart( int f, int *vars ) |
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382 | { |
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383 | int i; |
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384 | int v; |
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385 | char * name; |
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386 | int narg; |
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387 | |
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388 | name = varTable[ f ]->name; |
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389 | narg = varTable[ f ]->maxi; |
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390 | |
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391 | fncPrototipe = 1; |
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392 | |
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393 | bprintf("void %s( \n", name ); |
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394 | for( i = 0; i < narg-1; i++ ) { |
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395 | v = vars[ i ]; |
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396 | bprintf(" %-38s", strcat( C_Decl(v), "," ) ); |
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397 | if( varTable[ v ]->comment ) |
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398 | bprintf(" /* %s */\n", varTable[ v ]->comment ); |
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399 | else |
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400 | bprintf("\n"); |
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401 | } |
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402 | if( narg >= 1 ) { |
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403 | v = vars[ i ]; |
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404 | bprintf(" %-38s", C_Decl(v) ); |
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405 | if( varTable[ v ]->comment ) |
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406 | bprintf(" /* %s */\n", varTable[ v ]->comment ); |
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407 | else |
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408 | bprintf("\n"); |
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409 | } |
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410 | bprintf(")"); |
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411 | |
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412 | fncPrototipe = 0; |
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413 | |
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414 | FlushBuf(); |
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415 | } |
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416 | |
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417 | void C_FunctionPrototipe( int f, ... ) |
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418 | { |
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419 | Va_list args; |
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420 | int i; |
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421 | int vars[20]; |
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422 | char * name; |
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423 | int narg; |
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424 | |
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425 | name = varTable[ f ]->name; |
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426 | narg = varTable[ f ]->maxi; |
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427 | |
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428 | Va_start( args, f ); |
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429 | for( i = 0; i < narg; i++ ) |
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430 | vars[i] = va_arg( args, int ); |
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431 | va_end( args ); |
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432 | C_FunctionStart( f, vars ); |
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433 | bprintf(";\n"); |
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434 | |
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435 | FlushBuf(); |
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436 | } |
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437 | |
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438 | void C_FunctionBegin( int f, ... ) |
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439 | { |
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440 | Va_list args; |
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441 | int i; |
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442 | int vars[20]; |
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443 | char * name; |
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444 | int narg; |
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445 | |
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446 | name = varTable[ f ]->name; |
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447 | narg = varTable[ f ]->maxi; |
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448 | |
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449 | Va_start( args, f ); |
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450 | for( i = 0; i < narg; i++ ) |
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451 | vars[i] = va_arg( args, int ); |
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452 | va_end( args ); |
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453 | |
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454 | CommentFncBegin( f, vars ); |
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455 | C_FunctionStart( f, vars ); |
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456 | bprintf("\n"); |
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457 | bprintf("{\n"); |
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458 | |
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459 | FlushBuf(); |
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460 | |
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461 | MapFunctionComment( f, vars ); |
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462 | } |
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463 | |
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464 | void C_FunctionEnd( int f ) |
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465 | { |
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466 | bprintf("}\n\n"); |
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467 | |
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468 | FlushBuf(); |
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469 | |
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470 | CommentFunctionEnd( f ); |
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471 | } |
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472 | |
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473 | void C_Inline( char *fmt, ... ) |
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474 | { |
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475 | Va_list args; |
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476 | char buf[ 1000 ]; |
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477 | |
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478 | if( useLang != C_LANG ) return; |
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479 | |
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480 | Va_start( args, fmt ); |
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481 | vsprintf( buf, fmt, args ); |
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482 | va_end( args ); |
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483 | bprintf( "%s\n",buf ); |
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484 | |
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485 | FlushBuf(); |
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486 | } |
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487 | |
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488 | void Use_C() |
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489 | { |
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490 | WriteElm = C_WriteElm; |
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491 | WriteSymbol = C_WriteSymbol; |
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492 | WriteAssign = C_WriteAssign; |
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493 | WriteComment = C_WriteComment; |
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494 | DeclareConstant = C_DeclareConstant; |
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495 | Declare = C_Declare; |
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496 | ExternDeclare = C_ExternDeclare; |
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497 | GlobalDeclare = C_GlobalDeclare; |
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498 | InitDeclare = C_InitDeclare; |
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499 | |
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500 | FunctionStart = C_FunctionStart; |
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501 | FunctionPrototipe = C_FunctionPrototipe; |
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502 | FunctionBegin = C_FunctionBegin; |
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503 | FunctionEnd = C_FunctionEnd; |
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504 | |
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505 | OpenFile( ¶m_headerFile, rootFileName, "_Parameters.h", "Parameter Header File" ); |
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506 | OpenFile( &initFile, rootFileName, "_Initialize.c", "Initialization File" ); |
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507 | OpenFile( &driverFile, rootFileName, "_Main.c", "Main Program File" ); |
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508 | OpenFile( &integratorFile, rootFileName, "_Integrator.c", |
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509 | "Numerical Integrator (Time-Stepping) File" ); |
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510 | OpenFile( &linalgFile, rootFileName, "_LinearAlgebra.c", |
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511 | "Linear Algebra Data and Routines File" ); |
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512 | OpenFile( &functionFile, rootFileName, "_Function.c", |
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513 | "The ODE Function of Chemical Model File" ); |
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514 | OpenFile( &jacobianFile, rootFileName, "_Jacobian.c", |
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515 | "The ODE Jacobian of Chemical Model File" ); |
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516 | OpenFile( &rateFile, rootFileName, "_Rates.c", |
---|
517 | "The Reaction Rates File" ); |
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518 | if ( useStochastic ) |
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519 | OpenFile( &stochasticFile, rootFileName, "_Stochastic.c", |
---|
520 | "The Stochastic Chemical Model File" ); |
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521 | if ( useStoicmat ) { |
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522 | OpenFile( &stoichiomFile, rootFileName, "_Stoichiom.c", |
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523 | "The Stoichiometric Chemical Model File" ); |
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524 | OpenFile( &sparse_stoicmFile, rootFileName, "_StoichiomSP.c", |
---|
525 | "Sparse Stoichiometric Data Structures File" ); |
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526 | } |
---|
527 | OpenFile( &utilFile, rootFileName, "_Util.c", |
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528 | "Auxiliary Routines File" ); |
---|
529 | OpenFile( &sparse_dataFile, rootFileName, "_Sparse.h", "Sparse Data Header File" ); |
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530 | OpenFile( &global_dataFile, rootFileName, "_Global.h", "Global Data Header File" ); |
---|
531 | if ( useJacSparse ) { |
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532 | OpenFile( &sparse_jacFile, rootFileName, "_JacobianSP.c", |
---|
533 | "Sparse Jacobian Data Structures File" ); |
---|
534 | } |
---|
535 | if ( useHessian ) { |
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536 | OpenFile( &hessianFile, rootFileName, "_Hessian.c", "Hessian File" ); |
---|
537 | OpenFile( &sparse_hessFile, rootFileName, "_HessianSP.c", |
---|
538 | "Sparse Hessian Data Structures File" ); |
---|
539 | } |
---|
540 | OpenFile( &mapFile, rootFileName, ".map", |
---|
541 | "Map File with Human-Readable Information" ); |
---|
542 | OpenFile( &monitorFile, rootFileName, "_Monitor.c", |
---|
543 | "Utility Data Initialization" ); |
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544 | } |
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