[1] | 1 | PROGRAM analyze_particle_netcdf_data |
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| 2 | |
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| 3 | !------------------------------------------------------------------------------! |
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[2696] | 4 | ! This file is part of the PALM model system. |
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[1046] | 5 | ! |
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[2696] | 6 | ! PALM is free software: you can redistribute it and/or modify it under the |
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| 7 | ! terms of the GNU General Public License as published by the Free Software |
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| 8 | ! Foundation, either version 3 of the License, or (at your option) any later |
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| 9 | ! version. |
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[1046] | 10 | ! |
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| 11 | ! PALM is distributed in the hope that it will be useful, but WITHOUT ANY |
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| 12 | ! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR |
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| 13 | ! A PARTICULAR PURPOSE. See the GNU General Public License for more details. |
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| 14 | ! |
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| 15 | ! You should have received a copy of the GNU General Public License along with |
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| 16 | ! PALM. If not, see <http://www.gnu.org/licenses/>. |
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| 17 | ! |
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[4481] | 18 | ! Copyright 1997-2020 Leibniz Universitaet Hannover |
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[2696] | 19 | !------------------------------------------------------------------------------! |
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[1046] | 20 | ! |
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| 21 | ! Current revisions: |
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[1] | 22 | ! ----------------- |
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[2716] | 23 | ! |
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| 24 | ! |
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[1] | 25 | ! Former revisions: |
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| 26 | ! ----------------- |
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[1046] | 27 | ! $Id: analyze_particle_netcdf_data.f90 4481 2020-03-31 18:55:54Z moh.hefny $ |
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[2716] | 28 | ! Corrected "Former revisions" section |
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[1046] | 29 | ! |
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[2716] | 30 | ! 2696 2017-12-14 17:12:51Z kanani |
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| 31 | ! Change in file header (GPL part) |
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| 32 | ! |
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| 33 | ! 1310 2014-03-14 08:01:56Z raasch |
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| 34 | ! update of GPL copyright |
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| 35 | ! |
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[1047] | 36 | ! 1046 2012-11-09 14:38:45Z maronga |
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| 37 | ! code put under GPL (PALM 3.9) |
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| 38 | ! |
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[1] | 39 | ! Initial revision 12/07/05 |
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| 40 | ! |
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| 41 | ! |
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| 42 | ! Description: |
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| 43 | ! ------------ |
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| 44 | ! This is an EXAMPLE routine how to read NetCDF particle data output by PALM. |
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| 45 | ! As an example, the mean heigth and radius of all particles are calculated |
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| 46 | ! and output for each output time available on the file |
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| 47 | ! |
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| 48 | ! |
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| 49 | ! Any additonal analyzation requested has to be added by the user by following |
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| 50 | ! the steps given in this example! |
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| 51 | ! |
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| 52 | ! |
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| 53 | ! |
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| 54 | ! This routine must be compiled with: |
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| 55 | ! decalpha: |
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| 56 | ! f95 -fast -r8 -I/usr/local/netcdf-3.5.1/include |
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| 57 | ! -L/usr/local/netcdf-3.5.1/lib -lnetcdf |
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| 58 | ! IBM-Regatta: |
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| 59 | ! xlf95 -qsuffix=cpp=f90 -qrealsize=8 -q64 -qmaxmem=-1 -Q |
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| 60 | ! -I /aws/dataformats/netcdf-3.5.0/netcdf-64-32-3.5.0/include_F90_64 |
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| 61 | ! -L/aws/dataformats/netcdf-3.5.0/netcdf-64-32-3.5.0/lib -lnetcdf -O3 |
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| 62 | ! IBM-Regatta KISTI: |
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| 63 | ! xlf95 -qsuffix=cpp=f90 -qrealsize=8 -q64 -qmaxmem=-1 -Q |
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| 64 | ! -I /applic/netcdf64/src/f90 |
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| 65 | ! -L/applic/lib/NETCDF64 -lnetcdf -O3 |
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| 66 | ! IMUK: |
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| 67 | ! ifort analyze_particle_netcdf_data |
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| 68 | ! -I /muksoft/packages/netcdf/linux/include -axW -r8 -nbs -Vaxlib |
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| 69 | ! -L /muksoft/packages/netcdf/linux/lib -lnetcdf |
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| 70 | ! NEC-SX6: |
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| 71 | ! sxf90 analyze_particle_netcdf_data.f90 |
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| 72 | ! -I /pool/SX-6/netcdf/netcdf-3.6.0-p1/include -C hopt -Wf '-A idbl4' |
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| 73 | ! -D__netcdf -L/pool/SX-6/netcdf/netcdf-3.6.0-p1/lib -lnetcdf |
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| 74 | !------------------------------------------------------------------------------! |
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| 75 | |
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| 76 | USE netcdf |
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| 77 | |
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| 78 | IMPLICIT NONE |
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| 79 | |
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| 80 | ! |
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| 81 | !-- Local variables |
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| 82 | CHARACTER (LEN=7) :: id_char |
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| 83 | CHARACTER (LEN=2000) :: string |
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| 84 | |
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| 85 | |
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| 86 | INTEGER :: f, fn, i, id_dim_time, id_var_rnop, id_var_r, id_var_time, & |
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| 87 | id_var_x, id_var_y, id_var_z, n, nc_stat, ntl, start |
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| 88 | |
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| 89 | INTEGER, DIMENSION(1000) :: id_set |
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| 90 | INTEGER, DIMENSION(1) :: id_dim_time_old |
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| 91 | |
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| 92 | INTEGER, DIMENSION(:), ALLOCATABLE :: total_nop |
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| 93 | INTEGER, DIMENSION(:,:), ALLOCATABLE :: nop |
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| 94 | |
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| 95 | LOGICAL :: found |
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| 96 | |
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| 97 | REAL :: mean_r, mean_z |
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| 98 | REAL, DIMENSION(:), ALLOCATABLE :: prt_r, prt_x, prt_y, prt_z, tl |
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| 99 | |
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| 100 | ! |
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| 101 | !-- Check, if file from PE0 exists. If it does not exist, PALM did not |
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| 102 | !-- create any output for this cross-section. |
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| 103 | fn = 0 |
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| 104 | WRITE (id_char,'(''_'',I4.4)') fn |
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| 105 | INQUIRE ( FILE=id_char, EXIST=found ) |
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| 106 | |
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| 107 | ! |
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| 108 | !-- Find out the number of files (equal to the number of PEs which |
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| 109 | !-- have been used in PALM) and open them |
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| 110 | IF ( .NOT. found ) THEN |
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| 111 | PRINT*, '+++ no file _0000 found in current working directory' |
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| 112 | STOP |
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| 113 | ENDIF |
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| 114 | |
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| 115 | DO WHILE ( found ) |
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| 116 | |
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| 117 | ! |
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| 118 | !-- Open NetCDF dataset |
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| 119 | nc_stat = NF90_OPEN( id_char, NF90_NOWRITE, id_set(fn) ) |
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| 120 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 1 ) |
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| 121 | fn = fn + 1 |
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| 122 | WRITE (id_char,'(''_'',I4.4)') fn |
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| 123 | INQUIRE ( FILE=id_char, EXIST=found ) |
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| 124 | |
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| 125 | ENDDO |
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| 126 | fn = fn - 1 |
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| 127 | |
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| 128 | PRINT*, '*** ', fn+1, ' files found' |
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| 129 | |
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| 130 | ! |
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| 131 | !-- Get the run description header and print it out |
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| 132 | string = ' ' |
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| 133 | nc_stat = NF90_GET_ATT( id_set(0), NF90_GLOBAL, 'title', string ) |
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| 134 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 2 ) |
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| 135 | PRINT*, '*** run: ', TRIM( string ) |
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| 136 | |
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| 137 | ! |
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| 138 | !-- Get the available time levels |
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| 139 | nc_stat = NF90_INQ_VARID( id_set(0), 'time', id_var_time ) |
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| 140 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 3 ) |
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| 141 | |
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| 142 | nc_stat = NF90_INQUIRE_VARIABLE( id_set(0), id_var_time, & |
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| 143 | dimids = id_dim_time_old ) |
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| 144 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 4 ) |
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| 145 | id_dim_time = id_dim_time_old(1) |
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| 146 | |
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| 147 | nc_stat = NF90_INQUIRE_DIMENSION( id_set(0), id_dim_time, len = ntl ) |
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| 148 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 5 ) |
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| 149 | ALLOCATE( tl(1:ntl) ) |
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| 150 | print*, 'ntl=',ntl |
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| 151 | |
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| 152 | nc_stat = NF90_GET_VAR( id_set(0), id_var_time, tl ) |
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| 153 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 6 ) |
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| 154 | |
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| 155 | DO n = 1, ntl |
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| 156 | print*, '*** time_level(', n, ') =', tl(n) |
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| 157 | ENDDO |
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| 158 | |
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| 159 | ! |
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| 160 | !-- Get the number of particles used |
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| 161 | nc_stat = NF90_INQ_VARID( id_set(0), 'real_num_of_prt', id_var_rnop ) |
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| 162 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 7 ) |
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| 163 | |
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| 164 | ALLOCATE( nop(1:ntl,0:fn), total_nop(1:ntl) ) |
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| 165 | |
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| 166 | DO f = 0, fn |
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| 167 | |
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| 168 | nc_stat = NF90_GET_VAR( id_set(f), id_var_rnop, nop(1:ntl,f) ) |
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| 169 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 8 ) |
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| 170 | |
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| 171 | ENDDO |
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| 172 | |
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| 173 | total_nop = 0 |
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| 174 | DO n = 1, ntl |
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| 175 | |
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| 176 | DO f = 0, fn |
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| 177 | total_nop(n) = total_nop(n) + nop(n,f) |
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| 178 | ENDDO |
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| 179 | |
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| 180 | PRINT*, '*** time = ', tl(n), ' total # of particles: ', total_nop(n) |
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| 181 | |
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| 182 | ENDDO |
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| 183 | |
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| 184 | ! |
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| 185 | !-- Get the particle x and y coordinates |
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| 186 | nc_stat = NF90_INQ_VARID( id_set(0), 'pt_x', id_var_x ) |
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| 187 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 9 ) |
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| 188 | |
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| 189 | nc_stat = NF90_INQ_VARID( id_set(0), 'pt_y', id_var_y ) |
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| 190 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 10 ) |
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| 191 | |
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| 192 | nc_stat = NF90_INQ_VARID( id_set(0), 'pt_z', id_var_z ) |
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| 193 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 11 ) |
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| 194 | |
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| 195 | nc_stat = NF90_INQ_VARID( id_set(0), 'pt_radius', id_var_r ) |
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| 196 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 12 ) |
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| 197 | |
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| 198 | PRINT*, ' ' |
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| 199 | ! |
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| 200 | !-- Loop over all timelevels |
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| 201 | DO n = 1, ntl |
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| 202 | |
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| 203 | ALLOCATE( prt_x(total_nop(n)), prt_y(total_nop(n)), & |
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| 204 | prt_z(total_nop(n)), prt_r(total_nop(n)) ) |
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| 205 | |
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| 206 | start = 1 |
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| 207 | |
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| 208 | ! |
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| 209 | !-- Read the data from the files (one file per processor) |
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| 210 | DO f = 0, fn |
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| 211 | |
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| 212 | nc_stat = NF90_GET_VAR( id_set(f), id_var_x, & |
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| 213 | prt_x(start:start+nop(n,f)-1), & |
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| 214 | start = (/ 1, n /), & |
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| 215 | count = (/ nop(n,f), 1 /) ) |
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| 216 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 13 ) |
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| 217 | |
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| 218 | nc_stat = NF90_GET_VAR( id_set(f), id_var_y, & |
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| 219 | prt_y(start:start+nop(n,f)-1), & |
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| 220 | start = (/ 1, n /), & |
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| 221 | count = (/ nop(n,f), 1 /) ) |
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| 222 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 14 ) |
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| 223 | |
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| 224 | nc_stat = NF90_GET_VAR( id_set(f), id_var_z, & |
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| 225 | prt_z(start:start+nop(n,f)-1), & |
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| 226 | start = (/ 1, n /), & |
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| 227 | count = (/ nop(n,f), 1 /) ) |
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| 228 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 15 ) |
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| 229 | |
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| 230 | nc_stat = NF90_GET_VAR( id_set(f), id_var_r, & |
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| 231 | prt_r(start:start+nop(n,f)-1), & |
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| 232 | start = (/ 1, n /), & |
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| 233 | count = (/ nop(n,f), 1 /) ) |
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| 234 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 16 ) |
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| 235 | |
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| 236 | start = start + nop(n,f) |
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| 237 | |
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| 238 | ENDDO |
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| 239 | |
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| 240 | mean_z = 0.0 |
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| 241 | mean_r = 0.0 |
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| 242 | DO i = 1, total_nop(n) |
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| 243 | mean_z = mean_z + prt_z(i) |
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| 244 | mean_r = mean_r + prt_r(i) |
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| 245 | ENDDO |
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| 246 | mean_z = mean_z / total_nop(n) |
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| 247 | mean_r = mean_r / total_nop(n) |
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| 248 | |
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| 249 | PRINT*, '*** time = ', tl(n), ' mean height = ', mean_z, & |
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| 250 | ' mean radius = ', mean_r |
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| 251 | |
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| 252 | ! |
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| 253 | !-- prt_x, prt_y, prt_z, and prt_r contain the particle coordinates and |
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| 254 | !-- radii, respectively. Please output these data or carry out the |
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| 255 | !-- requested analyzing in this program before you deallocate the arrays. |
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| 256 | |
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| 257 | DEALLOCATE( prt_x, prt_y, prt_z, prt_r ) |
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| 258 | |
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| 259 | ENDDO |
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| 260 | |
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| 261 | |
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| 262 | END PROGRAM analyze_particle_netcdf_data |
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| 263 | |
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| 264 | |
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| 265 | |
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| 266 | SUBROUTINE handle_netcdf_error( nc_stat, position ) |
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| 267 | ! |
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| 268 | !-- Prints out a text message corresponding to the current NetCDF status |
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| 269 | |
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| 270 | USE netcdf |
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| 271 | |
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| 272 | IMPLICIT NONE |
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| 273 | |
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| 274 | INTEGER, INTENT(IN) :: nc_stat, position |
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| 275 | |
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| 276 | IF ( nc_stat /= NF90_NOERR ) THEN |
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| 277 | PRINT*, '+++ analyze_particle_netcdf_data' |
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| 278 | PRINT*, ' netcdf error: ', TRIM( nf90_strerror( nc_stat ) ) |
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| 279 | PRINT*, ' position = ', position |
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| 280 | STOP |
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| 281 | ENDIF |
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| 282 | |
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| 283 | END SUBROUTINE handle_netcdf_error |
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