[1] | 1 | PROGRAM analyze_particle_netcdf_data |
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| 2 | |
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| 3 | !------------------------------------------------------------------------------! |
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| 4 | ! Actual revisions: |
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| 5 | ! ----------------- |
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| 6 | ! |
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| 7 | ! |
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| 8 | ! Former revisions: |
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| 9 | ! ----------------- |
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| 10 | ! Initial revision 12/07/05 |
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| 11 | ! |
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| 12 | ! |
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| 13 | ! Description: |
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| 14 | ! ------------ |
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| 15 | ! This is an EXAMPLE routine how to read NetCDF particle data output by PALM. |
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| 16 | ! As an example, the mean heigth and radius of all particles are calculated |
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| 17 | ! and output for each output time available on the file |
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| 18 | ! |
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| 19 | ! |
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| 20 | ! Any additonal analyzation requested has to be added by the user by following |
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| 21 | ! the steps given in this example! |
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| 22 | ! |
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| 23 | ! |
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| 24 | ! |
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| 25 | ! This routine must be compiled with: |
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| 26 | ! decalpha: |
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| 27 | ! f95 -fast -r8 -I/usr/local/netcdf-3.5.1/include |
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| 28 | ! -L/usr/local/netcdf-3.5.1/lib -lnetcdf |
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| 29 | ! IBM-Regatta: |
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| 30 | ! xlf95 -qsuffix=cpp=f90 -qrealsize=8 -q64 -qmaxmem=-1 -Q |
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| 31 | ! -I /aws/dataformats/netcdf-3.5.0/netcdf-64-32-3.5.0/include_F90_64 |
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| 32 | ! -L/aws/dataformats/netcdf-3.5.0/netcdf-64-32-3.5.0/lib -lnetcdf -O3 |
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| 33 | ! IBM-Regatta KISTI: |
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| 34 | ! xlf95 -qsuffix=cpp=f90 -qrealsize=8 -q64 -qmaxmem=-1 -Q |
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| 35 | ! -I /applic/netcdf64/src/f90 |
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| 36 | ! -L/applic/lib/NETCDF64 -lnetcdf -O3 |
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| 37 | ! IMUK: |
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| 38 | ! ifort analyze_particle_netcdf_data |
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| 39 | ! -I /muksoft/packages/netcdf/linux/include -axW -r8 -nbs -Vaxlib |
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| 40 | ! -L /muksoft/packages/netcdf/linux/lib -lnetcdf |
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| 41 | ! NEC-SX6: |
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| 42 | ! sxf90 analyze_particle_netcdf_data.f90 |
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| 43 | ! -I /pool/SX-6/netcdf/netcdf-3.6.0-p1/include -C hopt -Wf '-A idbl4' |
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| 44 | ! -D__netcdf -L/pool/SX-6/netcdf/netcdf-3.6.0-p1/lib -lnetcdf |
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| 45 | !------------------------------------------------------------------------------! |
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| 46 | |
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| 47 | USE netcdf |
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| 48 | |
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| 49 | IMPLICIT NONE |
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| 50 | |
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| 51 | ! |
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| 52 | !-- Local variables |
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| 53 | CHARACTER (LEN=7) :: id_char |
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| 54 | CHARACTER (LEN=2000) :: string |
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| 55 | |
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| 56 | |
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| 57 | INTEGER :: f, fn, i, id_dim_time, id_var_rnop, id_var_r, id_var_time, & |
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| 58 | id_var_x, id_var_y, id_var_z, n, nc_stat, ntl, start |
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| 59 | |
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| 60 | INTEGER, DIMENSION(1000) :: id_set |
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| 61 | INTEGER, DIMENSION(1) :: id_dim_time_old |
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| 62 | |
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| 63 | INTEGER, DIMENSION(:), ALLOCATABLE :: total_nop |
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| 64 | INTEGER, DIMENSION(:,:), ALLOCATABLE :: nop |
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| 65 | |
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| 66 | LOGICAL :: found |
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| 67 | |
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| 68 | REAL :: mean_r, mean_z |
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| 69 | REAL, DIMENSION(:), ALLOCATABLE :: prt_r, prt_x, prt_y, prt_z, tl |
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| 70 | |
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| 71 | ! |
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| 72 | !-- Check, if file from PE0 exists. If it does not exist, PALM did not |
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| 73 | !-- create any output for this cross-section. |
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| 74 | fn = 0 |
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| 75 | WRITE (id_char,'(''_'',I4.4)') fn |
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| 76 | INQUIRE ( FILE=id_char, EXIST=found ) |
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| 77 | |
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| 78 | ! |
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| 79 | !-- Find out the number of files (equal to the number of PEs which |
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| 80 | !-- have been used in PALM) and open them |
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| 81 | IF ( .NOT. found ) THEN |
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| 82 | PRINT*, '+++ no file _0000 found in current working directory' |
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| 83 | STOP |
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| 84 | ENDIF |
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| 85 | |
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| 86 | DO WHILE ( found ) |
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| 87 | |
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| 88 | ! |
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| 89 | !-- Open NetCDF dataset |
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| 90 | nc_stat = NF90_OPEN( id_char, NF90_NOWRITE, id_set(fn) ) |
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| 91 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 1 ) |
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| 92 | fn = fn + 1 |
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| 93 | WRITE (id_char,'(''_'',I4.4)') fn |
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| 94 | INQUIRE ( FILE=id_char, EXIST=found ) |
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| 95 | |
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| 96 | ENDDO |
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| 97 | fn = fn - 1 |
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| 98 | |
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| 99 | PRINT*, '*** ', fn+1, ' files found' |
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| 100 | |
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| 101 | ! |
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| 102 | !-- Get the run description header and print it out |
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| 103 | string = ' ' |
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| 104 | nc_stat = NF90_GET_ATT( id_set(0), NF90_GLOBAL, 'title', string ) |
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| 105 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 2 ) |
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| 106 | PRINT*, '*** run: ', TRIM( string ) |
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| 107 | |
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| 108 | ! |
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| 109 | !-- Get the available time levels |
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| 110 | nc_stat = NF90_INQ_VARID( id_set(0), 'time', id_var_time ) |
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| 111 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 3 ) |
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| 112 | |
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| 113 | nc_stat = NF90_INQUIRE_VARIABLE( id_set(0), id_var_time, & |
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| 114 | dimids = id_dim_time_old ) |
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| 115 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 4 ) |
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| 116 | id_dim_time = id_dim_time_old(1) |
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| 117 | |
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| 118 | nc_stat = NF90_INQUIRE_DIMENSION( id_set(0), id_dim_time, len = ntl ) |
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| 119 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 5 ) |
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| 120 | ALLOCATE( tl(1:ntl) ) |
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| 121 | print*, 'ntl=',ntl |
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| 122 | |
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| 123 | nc_stat = NF90_GET_VAR( id_set(0), id_var_time, tl ) |
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| 124 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 6 ) |
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| 125 | |
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| 126 | DO n = 1, ntl |
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| 127 | print*, '*** time_level(', n, ') =', tl(n) |
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| 128 | ENDDO |
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| 129 | |
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| 130 | ! |
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| 131 | !-- Get the number of particles used |
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| 132 | nc_stat = NF90_INQ_VARID( id_set(0), 'real_num_of_prt', id_var_rnop ) |
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| 133 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 7 ) |
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| 134 | |
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| 135 | ALLOCATE( nop(1:ntl,0:fn), total_nop(1:ntl) ) |
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| 136 | |
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| 137 | DO f = 0, fn |
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| 138 | |
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| 139 | nc_stat = NF90_GET_VAR( id_set(f), id_var_rnop, nop(1:ntl,f) ) |
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| 140 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 8 ) |
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| 141 | |
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| 142 | ENDDO |
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| 143 | |
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| 144 | total_nop = 0 |
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| 145 | DO n = 1, ntl |
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| 146 | |
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| 147 | DO f = 0, fn |
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| 148 | total_nop(n) = total_nop(n) + nop(n,f) |
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| 149 | ENDDO |
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| 150 | |
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| 151 | PRINT*, '*** time = ', tl(n), ' total # of particles: ', total_nop(n) |
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| 152 | |
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| 153 | ENDDO |
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| 154 | |
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| 155 | ! |
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| 156 | !-- Get the particle x and y coordinates |
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| 157 | nc_stat = NF90_INQ_VARID( id_set(0), 'pt_x', id_var_x ) |
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| 158 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 9 ) |
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| 159 | |
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| 160 | nc_stat = NF90_INQ_VARID( id_set(0), 'pt_y', id_var_y ) |
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| 161 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 10 ) |
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| 162 | |
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| 163 | nc_stat = NF90_INQ_VARID( id_set(0), 'pt_z', id_var_z ) |
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| 164 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 11 ) |
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| 165 | |
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| 166 | nc_stat = NF90_INQ_VARID( id_set(0), 'pt_radius', id_var_r ) |
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| 167 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 12 ) |
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| 168 | |
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| 169 | PRINT*, ' ' |
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| 170 | ! |
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| 171 | !-- Loop over all timelevels |
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| 172 | DO n = 1, ntl |
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| 173 | |
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| 174 | ALLOCATE( prt_x(total_nop(n)), prt_y(total_nop(n)), & |
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| 175 | prt_z(total_nop(n)), prt_r(total_nop(n)) ) |
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| 176 | |
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| 177 | start = 1 |
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| 178 | |
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| 179 | ! |
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| 180 | !-- Read the data from the files (one file per processor) |
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| 181 | DO f = 0, fn |
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| 182 | |
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| 183 | nc_stat = NF90_GET_VAR( id_set(f), id_var_x, & |
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| 184 | prt_x(start:start+nop(n,f)-1), & |
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| 185 | start = (/ 1, n /), & |
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| 186 | count = (/ nop(n,f), 1 /) ) |
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| 187 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 13 ) |
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| 188 | |
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| 189 | nc_stat = NF90_GET_VAR( id_set(f), id_var_y, & |
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| 190 | prt_y(start:start+nop(n,f)-1), & |
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| 191 | start = (/ 1, n /), & |
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| 192 | count = (/ nop(n,f), 1 /) ) |
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| 193 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 14 ) |
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| 194 | |
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| 195 | nc_stat = NF90_GET_VAR( id_set(f), id_var_z, & |
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| 196 | prt_z(start:start+nop(n,f)-1), & |
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| 197 | start = (/ 1, n /), & |
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| 198 | count = (/ nop(n,f), 1 /) ) |
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| 199 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 15 ) |
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| 200 | |
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| 201 | nc_stat = NF90_GET_VAR( id_set(f), id_var_r, & |
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| 202 | prt_r(start:start+nop(n,f)-1), & |
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| 203 | start = (/ 1, n /), & |
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| 204 | count = (/ nop(n,f), 1 /) ) |
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| 205 | IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( nc_stat, 16 ) |
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| 206 | |
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| 207 | start = start + nop(n,f) |
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| 208 | |
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| 209 | ENDDO |
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| 210 | |
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| 211 | mean_z = 0.0 |
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| 212 | mean_r = 0.0 |
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| 213 | DO i = 1, total_nop(n) |
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| 214 | mean_z = mean_z + prt_z(i) |
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| 215 | mean_r = mean_r + prt_r(i) |
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| 216 | ENDDO |
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| 217 | mean_z = mean_z / total_nop(n) |
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| 218 | mean_r = mean_r / total_nop(n) |
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| 219 | |
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| 220 | PRINT*, '*** time = ', tl(n), ' mean height = ', mean_z, & |
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| 221 | ' mean radius = ', mean_r |
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| 222 | |
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| 223 | ! |
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| 224 | !-- prt_x, prt_y, prt_z, and prt_r contain the particle coordinates and |
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| 225 | !-- radii, respectively. Please output these data or carry out the |
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| 226 | !-- requested analyzing in this program before you deallocate the arrays. |
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| 227 | |
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| 228 | DEALLOCATE( prt_x, prt_y, prt_z, prt_r ) |
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| 229 | |
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| 230 | ENDDO |
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| 231 | |
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| 232 | |
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| 233 | END PROGRAM analyze_particle_netcdf_data |
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| 234 | |
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| 235 | |
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| 236 | |
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| 237 | SUBROUTINE handle_netcdf_error( nc_stat, position ) |
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| 238 | ! |
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| 239 | !-- Prints out a text message corresponding to the current NetCDF status |
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| 240 | |
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| 241 | USE netcdf |
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| 242 | |
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| 243 | IMPLICIT NONE |
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| 244 | |
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| 245 | INTEGER, INTENT(IN) :: nc_stat, position |
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| 246 | |
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| 247 | IF ( nc_stat /= NF90_NOERR ) THEN |
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| 248 | PRINT*, '+++ analyze_particle_netcdf_data' |
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| 249 | PRINT*, ' netcdf error: ', TRIM( nf90_strerror( nc_stat ) ) |
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| 250 | PRINT*, ' position = ', position |
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| 251 | STOP |
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| 252 | ENDIF |
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| 253 | |
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| 254 | END SUBROUTINE handle_netcdf_error |
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