1 | !> @file shared_memory_io_mod.f90 |
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2 | !--------------------------------------------------------------------------------------------------! |
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3 | ! This file is part of the PALM model system. |
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4 | ! |
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5 | ! PALM is free software: you can redistribute it and/or modify it under the terms of the GNU General |
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6 | ! Public License as published by the Free Software Foundation, either version 3 of the License, or |
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7 | ! (at your option) any later version. |
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8 | ! |
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9 | ! PALM is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the |
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10 | ! implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General |
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11 | ! Public License for more details. |
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12 | ! |
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13 | ! You should have received a copy of the GNU General Public License along with PALM. If not, see |
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14 | ! <http://www.gnu.org/licenses/>. |
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15 | ! |
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16 | ! Copyright 1997-2020 Leibniz Universitaet Hannover |
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17 | !--------------------------------------------------------------------------------------------------! |
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18 | ! |
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19 | ! |
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20 | ! Current revisions: |
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21 | ! ----------------- |
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22 | ! |
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23 | ! |
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24 | ! Former revisions: |
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25 | ! $Id: shared_memory_io_mod.f90 4591 2020-07-06 15:56:08Z suehring $ |
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26 | ! |
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27 | ! File re-formatted to follow the PALM coding standard |
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28 | ! |
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29 | ! |
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30 | ! |
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31 | ! Initial version (Klaus Ketelsen) |
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32 | ! |
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33 | ! |
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34 | ! |
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35 | ! Description: |
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36 | ! ------------ |
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37 | !> Handle MPI-IO or NetCDF-IO shared memory arrays. |
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38 | !> This module performs the organization of new communicators, adapted PE-grids and allocation of |
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39 | !> shared memory arrays. The IO itself is not done here. |
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40 | !--------------------------------------------------------------------------------------------------! |
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41 | MODULE shared_memory_io_mod |
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42 | |
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43 | #if defined( __parallel ) |
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44 | #if defined( __mpifh ) |
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45 | INCLUDE "mpif.h" |
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46 | #else |
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47 | USE MPI |
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48 | #endif |
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49 | #endif |
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50 | |
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51 | USE, INTRINSIC :: ISO_C_BINDING |
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52 | |
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53 | USE control_parameters, & |
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54 | ONLY: maximum_grid_level, & |
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55 | message_string, & |
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56 | mg_switch_to_pe0_level |
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57 | |
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58 | |
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59 | USE indices, & |
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60 | ONLY: nbgp, & |
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61 | nnx, & |
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62 | nny, & |
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63 | nnz, & |
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64 | nx, & |
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65 | nxl, & |
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66 | nxlg, & |
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67 | nxr, & |
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68 | nxrg, & |
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69 | ny, & |
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70 | nyn, & |
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71 | nyng, & |
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72 | nys, & |
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73 | nysg, & |
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74 | nzb, & |
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75 | nzt |
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76 | |
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77 | USE kinds, & |
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78 | ONLY: iwp, & |
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79 | wp |
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80 | |
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81 | |
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82 | USE transpose_indices, & |
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83 | ONLY: nxl_z, & |
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84 | nxr_z, & |
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85 | nyn_x, & |
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86 | nyn_z, & |
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87 | nys_x, & |
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88 | nys_z |
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89 | |
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90 | |
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91 | |
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92 | USE pegrid, & |
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93 | ONLY: comm1dx, & |
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94 | comm1dy, & |
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95 | comm2d, & |
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96 | ierr, & |
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97 | myid, & |
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98 | myidx, & |
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99 | myidy, & |
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100 | npex, & |
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101 | npey, & |
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102 | numprocs, & |
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103 | pdims, & |
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104 | pleft, & |
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105 | pnorth, & |
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106 | pright, & |
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107 | psouth, & |
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108 | sendrecvcount_xy |
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109 | |
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110 | #if defined( __parallel ) |
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111 | USE pegrid, & |
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112 | ONLY: pcoord, & |
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113 | reorder |
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114 | #endif |
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115 | |
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116 | IMPLICIT NONE |
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117 | |
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118 | PRIVATE |
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119 | |
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120 | SAVE |
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121 | |
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122 | ! |
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123 | !-- Type to store grid information |
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124 | TYPE, PUBLIC :: local_boundaries !< |
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125 | |
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126 | INTEGER(iwp) :: nnx !< |
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127 | INTEGER(iwp) :: nny !< |
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128 | INTEGER(iwp) :: nx !< |
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129 | INTEGER(iwp) :: nxl !< |
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130 | INTEGER(iwp) :: nxr !< |
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131 | INTEGER(iwp) :: ny !< |
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132 | INTEGER(iwp) :: nyn !< |
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133 | INTEGER(iwp) :: nys !< |
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134 | |
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135 | |
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136 | |
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137 | |
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138 | END TYPE local_boundaries |
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139 | |
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140 | ! |
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141 | !-- Class definition for shared memory instances. |
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142 | !-- For every use of shared memory IO, one instance of this class is created. |
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143 | TYPE, PUBLIC :: sm_class !< |
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144 | |
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145 | INTEGER(iwp) :: nr_io_pe_per_node = 2 !< typical configuration, 2 sockets per node |
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146 | LOGICAL :: no_shared_Memory_in_this_run !< |
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147 | ! |
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148 | !-- Variables for the shared memory communicator |
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149 | INTEGER(iwp), PUBLIC :: comm_shared !< Communicator for processes with shared array |
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150 | INTEGER(iwp), PUBLIC :: sh_npes !< |
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151 | INTEGER(iwp), PUBLIC :: sh_rank !< |
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152 | |
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153 | LOGICAL, PUBLIC :: iam_io_pe = .TRUE. !< This PE is an IO-PE |
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154 | ! |
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155 | !-- Variables for the I/O virtual grid |
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156 | INTEGER(iwp), PUBLIC :: comm_io !< Communicator for all IO processes |
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157 | INTEGER(iwp), PUBLIC :: io_npes !< |
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158 | INTEGER(iwp), PUBLIC :: io_rank !< |
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159 | |
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160 | TYPE( local_boundaries ), PUBLIC :: io_grid |
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161 | |
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162 | ! |
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163 | !-- Variables for the node local communicator |
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164 | INTEGER(iwp) :: comm_node !< Communicator for all processes of current node |
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165 | INTEGER(iwp) :: io_pe_global_rank !< |
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166 | INTEGER(iwp) :: n_npes !< |
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167 | INTEGER(iwp) :: n_rank !< |
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168 | |
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169 | CONTAINS |
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170 | |
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171 | PRIVATE |
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172 | |
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173 | PROCEDURE, PASS(this), PUBLIC :: is_sm_active !< |
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174 | PROCEDURE, PASS(this), PUBLIC :: sm_adjust_outer_boundary !< |
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175 | PROCEDURE, PASS(this), PUBLIC :: sm_free_shared !< |
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176 | PROCEDURE, PASS(this), PUBLIC :: sm_init_comm !< |
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177 | PROCEDURE, PASS(this), PUBLIC :: sm_node_barrier !< |
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178 | #if defined( __parallel ) |
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179 | PROCEDURE, PASS(this), PUBLIC :: sm_allocate_shared_1d !< |
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180 | PROCEDURE, PASS(this), PUBLIC :: sm_allocate_shared_2d !< |
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181 | PROCEDURE, PASS(this), PUBLIC :: sm_allocate_shared_2di !< |
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182 | PROCEDURE, PASS(this), PUBLIC :: sm_allocate_shared_3d !< |
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183 | |
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184 | GENERIC, PUBLIC :: sm_allocate_shared => sm_allocate_shared_1d, sm_allocate_shared_2d, & |
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185 | sm_allocate_shared_2di, sm_allocate_shared_3d !< |
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186 | #endif |
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187 | END TYPE sm_class |
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188 | |
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189 | |
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190 | CONTAINS |
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191 | |
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192 | |
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193 | !--------------------------------------------------------------------------------------------------! |
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194 | ! Description: |
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195 | ! ------------ |
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196 | !> Create the communicator for shared memory groups and IO-PEs. |
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197 | !> Setup the grid for shared memory IO. |
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198 | !--------------------------------------------------------------------------------------------------! |
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199 | SUBROUTINE sm_init_comm( this, sm_active ) |
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200 | |
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201 | IMPLICIT NONE |
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202 | |
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203 | CLASS(sm_class), INTENT(INOUT) :: this !< pointer to access internal variables of this call |
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204 | |
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205 | #if defined( __parallel ) |
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206 | INTEGER :: color !< |
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207 | INTEGER :: max_n_npes !< Maximum number of PEs/node |
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208 | #endif |
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209 | |
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210 | LOGICAL, INTENT(IN) :: sm_active !< Flag to activate shared-memory IO |
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211 | |
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212 | |
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213 | this%no_shared_memory_in_this_run = .NOT. sm_active |
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214 | |
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215 | IF ( this%no_shared_memory_in_this_run ) THEN |
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216 | this%iam_io_pe = .TRUE. |
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217 | RETURN |
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218 | ENDIF |
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219 | |
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220 | #if defined( __parallel ) |
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221 | ! |
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222 | !-- Determine, how many MPI threads are running on a node |
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223 | this%iam_io_pe = .FALSE. |
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224 | CALL MPI_COMM_SPLIT_TYPE( comm2d, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL, this%comm_node, ierr ) |
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225 | CALL MPI_COMM_SIZE( this%comm_node, this%n_npes, ierr ) |
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226 | CALL MPI_COMM_RANK( this%comm_node, this%n_rank, ierr ) |
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227 | |
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228 | CALL MPI_ALLREDUCE( this%n_npes, max_n_npes, 1, MPI_INTEGER, MPI_MAX, comm2d, ierr ) |
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229 | ! |
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230 | !-- Decide, if the configuration can run with shared-memory IO |
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231 | IF ( max_n_npes > 64 ) THEN |
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232 | ! |
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233 | !-- Special configuration on the HLRN-IV system with 4 shared memory blocks/node |
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234 | this%nr_io_pe_per_node = 4 |
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235 | |
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236 | ELSEIF ( max_n_npes <= 32 ) THEN |
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237 | ! |
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238 | !-- No shared memory IO with less than 32 threads/node |
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239 | this%no_shared_memory_in_this_run = .TRUE. |
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240 | this%iam_io_pe = .TRUE. |
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241 | RETURN |
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242 | ENDIF |
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243 | |
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244 | ! |
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245 | !-- No shared memory IO with small setups |
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246 | IF ( nx < 24 .OR. ny < 24 ) THEN |
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247 | this%no_shared_memory_in_this_run = .TRUE. |
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248 | this%iam_io_pe = .TRUE. |
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249 | RETURN |
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250 | ENDIF |
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251 | |
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252 | ! |
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253 | !-- Divide a node into shared memory groups, depending on the virtual x-y grid |
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254 | CALL compute_color( color ) |
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255 | ! |
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256 | !-- If no shared memory IO possible, nothing is left to be done here. |
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257 | IF ( this%no_shared_memory_in_this_run ) RETURN |
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258 | |
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259 | ! |
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260 | !-- Setup the shared memory area |
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261 | CALL MPI_COMM_SPLIT( this%comm_node, color, 0, this%comm_shared, ierr ) |
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262 | CALL MPI_COMM_SIZE( this%comm_shared, this%sh_npes, ierr ) |
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263 | CALL MPI_COMM_RANK( this%comm_shared, this%sh_rank, ierr ) |
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264 | |
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265 | ! |
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266 | !-- Setup the communicator across the nodes depending on the shared memory rank. |
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267 | !-- All threads with shared memory rank 0 will be I/O threads. |
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268 | color = this%sh_rank |
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269 | CALL MPI_COMM_SPLIT( comm2d, color, 0, this%comm_io, ierr ) |
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270 | |
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271 | IF ( this%comm_io /= MPI_COMM_NULL ) THEN |
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272 | CALL MPI_COMM_SIZE( this%comm_io, this%io_npes, ierr ) |
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273 | CALL MPI_COMM_RANK( this%comm_io, this%io_rank, ierr ) |
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274 | ELSE |
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275 | this%io_npes = -1 |
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276 | this%io_rank = -1 |
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277 | ENDIF |
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278 | |
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279 | IF ( this%sh_rank == 0 ) THEN |
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280 | this%iam_io_pe = .TRUE. |
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281 | this%io_pe_global_rank = myid |
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282 | ENDIF |
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283 | CALL MPI_BCAST( this%io_pe_global_rank, 1, MPI_INTEGER, 0, this%comm_shared, ierr ) |
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284 | |
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285 | #else |
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286 | this%iam_io_pe = .TRUE. |
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287 | #endif |
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288 | |
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289 | #if defined( __parallel ) |
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290 | CONTAINS |
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291 | |
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292 | SUBROUTINE compute_color( color ) |
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293 | |
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294 | IMPLICIT NONE |
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295 | |
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296 | INTEGER(iwp), INTENT(OUT) :: color !< |
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297 | |
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298 | INTEGER(iwp) :: group_start !< |
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299 | INTEGER(iwp) :: my_color !< |
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300 | INTEGER(iwp) :: n !< |
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301 | INTEGER(iwp) :: pe !< |
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302 | INTEGER(iwp) :: sh_group_size !< |
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303 | |
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304 | INTEGER(iwp), DIMENSION(4,0:this%n_npes-1) :: local_dim_s !< |
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305 | INTEGER(iwp), DIMENSION(4,0:this%n_npes-1) :: local_dim_r !< |
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306 | |
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307 | TYPE(local_boundaries), DIMENSION(32) :: node_grid !< |
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308 | |
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309 | ! |
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310 | !-- No shared memory I/O on one node jobs |
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311 | IF ( numprocs < this%n_npes ) THEN |
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312 | this%no_shared_memory_in_this_run = .TRUE. |
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313 | RETURN |
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314 | ENDIF |
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315 | |
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316 | local_dim_s = 0 |
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317 | local_dim_s(1,this%n_rank) = nxl |
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318 | local_dim_s(2,this%n_rank) = nxr |
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319 | local_dim_s(3,this%n_rank) = nys |
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320 | local_dim_s(4,this%n_rank) = nyn |
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321 | |
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322 | node_grid%nyn = -1 |
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323 | ! |
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324 | !-- Distribute the x-y layout of all cores of a node to all node processes |
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325 | CALL MPI_ALLREDUCE( local_dim_s, local_dim_r, SIZE( local_dim_s ), MPI_INTEGER, MPI_SUM, & |
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326 | this%comm_node, ierr ) |
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327 | sh_group_size = ( max_n_npes + this%nr_io_pe_per_node - 1 ) / this%nr_io_pe_per_node |
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328 | |
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329 | pe = 0 |
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330 | my_color = 1 ! color is used to split the shared memory communicator into a communicator for |
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331 | ! io groups |
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332 | group_start = pe |
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333 | node_grid(my_color)%nxl = local_dim_r(1,group_start) |
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334 | node_grid(my_color)%nxr = local_dim_r(2,group_start) |
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335 | node_grid(my_color)%nys = local_dim_r(3,group_start) |
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336 | |
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337 | DO n = 1, this%n_npes-1 |
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338 | |
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339 | pe = n |
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340 | IF ( n > 0 .AND. MOD( n,sh_group_size ) == 0 ) THEN |
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341 | ! |
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342 | !-- If group boundary, start new IO group |
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343 | node_grid(my_color)%nyn = local_dim_r(4,pe-1) |
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344 | my_color = my_color + 1 |
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345 | group_start = pe |
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346 | node_grid(my_color)%nxl = local_dim_r(1,group_start) |
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347 | node_grid(my_color)%nxr = local_dim_r(2,group_start) |
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348 | node_grid(my_color)%nys = local_dim_r(3,group_start) |
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349 | |
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350 | ELSEIF ( local_dim_r(1,pe) /= node_grid(my_color)%nxl ) THEN |
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351 | ! |
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352 | !-- If nxl changes, start new IO group |
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353 | node_grid(my_color)%nyn = local_dim_r(4,pe-1) |
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354 | my_color = my_color+1 |
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355 | group_start = pe |
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356 | node_grid(my_color)%nxl = local_dim_r(1,group_start) |
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357 | node_grid(my_color)%nxr = local_dim_r(2,group_start) |
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358 | node_grid(my_color)%nys = local_dim_r(3,group_start) |
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359 | ENDIF |
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360 | ! |
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361 | !-- Save values for local PE |
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362 | IF ( this%n_rank == pe ) THEN ! |
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363 | color = my_color |
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364 | ENDIF |
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365 | IF ( n == this%n_npes-1 ) node_grid(my_color)%nyn = local_dim_r(4,pe) |
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366 | |
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367 | ENDDO |
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368 | |
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369 | IF ( this%n_rank == 0 ) THEN |
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370 | color = 1 |
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371 | ENDIF |
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372 | |
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373 | this%io_grid = node_grid(color) |
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374 | this%io_grid%nnx = this%io_grid%nxr - this%io_grid%nxl + 1 |
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375 | this%io_grid%nny = this%io_grid%nyn - this%io_grid%nys + 1 |
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376 | |
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377 | END SUBROUTINE compute_color |
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378 | #endif |
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379 | |
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380 | END SUBROUTINE sm_init_comm |
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381 | |
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382 | |
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383 | |
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384 | !--------------------------------------------------------------------------------------------------! |
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385 | ! Description: |
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386 | ! ------------ |
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387 | !> Function to return if shared Memory IO is active. |
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388 | !--------------------------------------------------------------------------------------------------! |
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389 | FUNCTION is_sm_active( this ) RESULT( ac ) |
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390 | |
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391 | IMPLICIT NONE |
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392 | |
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393 | CLASS(sm_class), INTENT(inout) :: this !< |
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394 | |
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395 | LOGICAL :: ac !< |
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396 | |
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397 | ac = .NOT. this%no_shared_memory_in_this_run |
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398 | |
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399 | END FUNCTION is_sm_active |
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400 | |
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401 | |
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402 | #if defined( __parallel ) |
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403 | !--------------------------------------------------------------------------------------------------! |
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404 | ! Description: |
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405 | ! ------------ |
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406 | !> Allocate shared 1d-REAL array on ALL threads |
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407 | !--------------------------------------------------------------------------------------------------! |
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408 | SUBROUTINE sm_allocate_shared_1d( this, p1, d1, d2, win ) |
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409 | |
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410 | IMPLICIT NONE |
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411 | |
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412 | CLASS(sm_class), INTENT(inout) :: this !< |
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413 | !< |
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414 | INTEGER(iwp) :: disp_unit !< |
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415 | INTEGER(iwp), INTENT(IN) :: d1 !< |
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416 | INTEGER(iwp), INTENT(IN) :: d2 !< |
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417 | INTEGER(iwp), SAVE :: pe_from = 0 !< |
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418 | INTEGER(KIND=MPI_ADDRESS_KIND) :: rem_size !< |
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419 | INTEGER(iwp), INTENT(OUT) :: win !< |
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420 | INTEGER(KIND=MPI_ADDRESS_KIND) :: wsize !< |
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421 | |
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422 | INTEGER, DIMENSION(1) :: buf_shape !< |
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423 | |
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424 | REAL(wp), DIMENSION(:), POINTER :: buf !< |
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425 | REAL(wp), DIMENSION(:), POINTER :: p1 !< |
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426 | |
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427 | TYPE(C_PTR), SAVE :: base_ptr !< |
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428 | TYPE(C_PTR), SAVE :: rem_ptr !< |
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429 | |
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430 | |
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431 | IF ( this%no_shared_memory_in_this_run ) RETURN |
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432 | ! |
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433 | !-- Allocate shared memory on node rank 0 threads. |
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434 | IF ( this%sh_rank == pe_from ) THEN |
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435 | wsize = d2 - d1 + 1 |
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436 | ELSE |
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437 | wsize = 1 |
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438 | ENDIF |
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439 | wsize = wsize * 8 ! Please note, size is always in bytes, independently of the displacement |
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440 | ! unit |
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441 | |
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442 | CALL MPI_WIN_ALLOCATE_SHARED( wsize, 8, MPI_INFO_NULL, this%comm_shared,base_ptr, win, ierr ) |
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443 | ! |
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444 | !-- Get C-pointer of the memory located on node-rank pe_from (sh_rank == pe_from) |
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445 | CALL MPI_WIN_SHARED_QUERY( win, pe_from, rem_size, disp_unit, rem_ptr, ierr ) |
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446 | ! |
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447 | !-- Convert C- to Fortran-pointer |
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448 | buf_shape(1) = d2 - d1 + 1 |
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449 | CALL C_F_POINTER( rem_ptr, buf, buf_shape ) |
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450 | p1(d1:) => buf |
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451 | ! |
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452 | !-- Allocate shared memory in round robin on all PEs of a node. |
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453 | pe_from = MOD( pe_from, this%sh_npes ) |
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454 | |
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455 | END SUBROUTINE sm_allocate_shared_1d |
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456 | |
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457 | |
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458 | !--------------------------------------------------------------------------------------------------! |
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459 | ! Description: |
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460 | ! ------------ |
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461 | !> Allocate shared 2d-REAL array on ALL threads |
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462 | !--------------------------------------------------------------------------------------------------! |
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463 | SUBROUTINE sm_allocate_shared_2d( this, p2, n_nxlg, n_nxrg, n_nysg, n_nyng, win ) |
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464 | |
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465 | IMPLICIT NONE |
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466 | |
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467 | CLASS(sm_class), INTENT(INOUT) :: this !< |
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468 | |
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469 | INTEGER(iwp) :: disp_unit !< |
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470 | INTEGER(iwp), INTENT(IN) :: n_nxlg !< |
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471 | INTEGER(iwp), INTENT(IN) :: n_nxrg !< |
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472 | INTEGER(iwp), INTENT(IN) :: n_nyng !< |
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473 | INTEGER(iwp), INTENT(IN) :: n_nysg !< |
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474 | INTEGER(iwp), SAVE :: pe_from = 0 !< |
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475 | INTEGER(KIND=MPI_ADDRESS_KIND) :: rem_size !< |
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476 | INTEGER(iwp), INTENT(OUT) :: win !< |
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477 | INTEGER(KIND=MPI_ADDRESS_KIND) :: wsize !< |
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478 | |
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479 | INTEGER(iwp), DIMENSION(2) :: buf_shape !< |
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480 | |
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481 | REAL(wp), DIMENSION(:,:), POINTER :: buf !< |
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482 | REAL(wp), DIMENSION(:,:), POINTER :: p2 !< |
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483 | |
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484 | TYPE(C_PTR),SAVE :: base_ptr !< |
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485 | TYPE(C_PTR),SAVE :: rem_ptr !< |
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486 | |
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487 | |
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488 | IF ( this%no_shared_memory_in_this_run ) RETURN |
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489 | ! |
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490 | !-- Allocate shared memory on node rank 0 threads. |
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491 | IF ( this%sh_rank == pe_from ) THEN |
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492 | wsize = ( n_nyng - n_nysg + 1 ) * ( n_nxrg - n_nxlg + 1 ) |
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493 | ELSE |
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494 | wsize = 1 |
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495 | ENDIF |
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496 | |
---|
497 | wsize = wsize * 8 ! Please note, size is always in bytes, independently of the displacement |
---|
498 | ! unit |
---|
499 | |
---|
500 | CALL MPI_WIN_ALLOCATE_SHARED( wsize, 8, MPI_INFO_NULL, this%comm_shared, base_ptr, win, ierr ) |
---|
501 | ! |
---|
502 | !-- Get C-pointer of the memory located on node-rank pe_from (sh_rank == pe_from) |
---|
503 | CALL MPI_WIN_SHARED_QUERY( win, pe_from, rem_size, disp_unit, rem_ptr, ierr ) |
---|
504 | ! |
---|
505 | !-- Convert C- to Fortran-pointer |
---|
506 | buf_shape(2) = n_nyng - n_nysg + 1 |
---|
507 | buf_shape(1) = n_nxrg - n_nxlg + 1 |
---|
508 | CALL C_F_POINTER( rem_ptr, buf, buf_shape ) |
---|
509 | p2(n_nxlg:, n_nysg:) => buf |
---|
510 | ! |
---|
511 | !-- Allocate shared memory in round robin on all PEs of a node. |
---|
512 | pe_from = MOD( pe_from, this%sh_npes ) |
---|
513 | |
---|
514 | END SUBROUTINE sm_allocate_shared_2d |
---|
515 | |
---|
516 | |
---|
517 | !--------------------------------------------------------------------------------------------------! |
---|
518 | ! Description: |
---|
519 | ! ------------ |
---|
520 | !> Allocate shared 2d-INTEGER array on ALL threads |
---|
521 | !--------------------------------------------------------------------------------------------------! |
---|
522 | SUBROUTINE sm_allocate_shared_2di( this, p2i, n_nxlg, n_nxrg, n_nysg, n_nyng, win ) |
---|
523 | |
---|
524 | IMPLICIT NONE |
---|
525 | |
---|
526 | CLASS(sm_class), INTENT(inout) :: this !< |
---|
527 | |
---|
528 | INTEGER(iwp) :: disp_unit !< |
---|
529 | INTEGER(iwp), INTENT(IN) :: n_nxlg !< |
---|
530 | INTEGER(iwp), INTENT(IN) :: n_nxrg !< |
---|
531 | INTEGER(iwp), INTENT(IN) :: n_nyng !< |
---|
532 | INTEGER(iwp), INTENT(IN) :: n_nysg !< |
---|
533 | INTEGER(iwp), SAVE :: pe_from = 0 !< |
---|
534 | INTEGER(kind=MPI_ADDRESS_KIND) :: rem_size !< |
---|
535 | INTEGER(iwp), INTENT(OUT) :: win !< |
---|
536 | INTEGER(kind=MPI_ADDRESS_KIND) :: wsize !< |
---|
537 | |
---|
538 | INTEGER(iwp), DIMENSION(2) :: buf_shape !< |
---|
539 | |
---|
540 | INTEGER(iwp), DIMENSION(:,:), POINTER :: buf !< |
---|
541 | INTEGER(iwp), DIMENSION(:,:), POINTER :: p2i !< |
---|
542 | |
---|
543 | TYPE(C_PTR),SAVE :: base_ptr !< |
---|
544 | TYPE(C_PTR),SAVE :: rem_ptr !< |
---|
545 | |
---|
546 | |
---|
547 | IF ( this%no_shared_memory_in_this_run ) RETURN |
---|
548 | ! |
---|
549 | !-- Allocate shared memory on node rank 0 threads. |
---|
550 | IF ( this%sh_rank == pe_from ) THEN |
---|
551 | wsize = ( n_nyng - n_nysg + 1 ) * ( n_nxrg - n_nxlg + 1 ) |
---|
552 | ELSE |
---|
553 | wsize = 1 |
---|
554 | ENDIF |
---|
555 | |
---|
556 | wsize = wsize * 4 ! Please note, size is always in bytes, independently of the displacement |
---|
557 | ! unit |
---|
558 | |
---|
559 | CALL MPI_WIN_ALLOCATE_SHARED( wsize, 4, MPI_INFO_NULL, this%comm_shared, base_ptr, win, ierr ) |
---|
560 | ! |
---|
561 | !-- Get C-pointer of the memory located on node-rank pe_from (sh_rank == pe_from) |
---|
562 | CALL MPI_WIN_SHARED_QUERY( win, pe_from, rem_size, disp_unit, rem_ptr, ierr ) |
---|
563 | ! |
---|
564 | !-- Convert C- to Fortran-pointer |
---|
565 | buf_shape(2) = n_nyng - n_nysg + 1 |
---|
566 | buf_shape(1) = n_nxrg - n_nxlg + 1 |
---|
567 | CALL C_F_POINTER( rem_ptr, buf, buf_shape ) |
---|
568 | p2i(n_nxlg:, n_nysg:) => buf |
---|
569 | ! |
---|
570 | !-- Allocate shared memory in round robin on all PEs of a node. |
---|
571 | pe_from = MOD( pe_from, this%sh_npes ) |
---|
572 | |
---|
573 | END SUBROUTINE sm_allocate_shared_2di |
---|
574 | |
---|
575 | |
---|
576 | !--------------------------------------------------------------------------------------------------! |
---|
577 | ! Description: |
---|
578 | ! ------------ |
---|
579 | !> Allocate shared 3d-REAL array on ALL threads |
---|
580 | !--------------------------------------------------------------------------------------------------! |
---|
581 | SUBROUTINE sm_allocate_shared_3d( this, p3, d1s, d1e, d2s, d2e, d3s, d3e, win ) |
---|
582 | |
---|
583 | IMPLICIT NONE |
---|
584 | |
---|
585 | CLASS(sm_class), INTENT(inout) :: this !< |
---|
586 | |
---|
587 | INTEGER :: disp_unit !< |
---|
588 | INTEGER, INTENT(IN) :: d1e !< |
---|
589 | INTEGER, INTENT(IN) :: d1s !< |
---|
590 | INTEGER, INTENT(IN) :: d2e !< |
---|
591 | INTEGER, INTENT(IN) :: d2s !< |
---|
592 | INTEGER, INTENT(IN) :: d3e !< |
---|
593 | INTEGER, INTENT(IN) :: d3s !< |
---|
594 | INTEGER, SAVE :: pe_from = 0 !< |
---|
595 | INTEGER(KIND=MPI_ADDRESS_KIND) :: rem_size !< |
---|
596 | INTEGER, INTENT(OUT) :: win !< |
---|
597 | INTEGER(KIND=MPI_ADDRESS_KIND) :: wsize !< |
---|
598 | |
---|
599 | INTEGER, DIMENSION(3) :: buf_shape !< |
---|
600 | |
---|
601 | REAL(wp), DIMENSION(:,:,:), POINTER :: buf !< |
---|
602 | REAL(wp), DIMENSION(:,:,:), POINTER :: p3 !< |
---|
603 | |
---|
604 | TYPE(C_PTR), SAVE :: base_ptr !< |
---|
605 | TYPE(C_PTR), SAVE :: rem_ptr !< |
---|
606 | |
---|
607 | |
---|
608 | IF ( this%no_shared_memory_in_this_run ) RETURN |
---|
609 | ! |
---|
610 | !-- Allocate shared memory on node rank 0 threads. |
---|
611 | IF ( this%sh_rank == pe_from ) THEN |
---|
612 | wsize = ( d3e - d3s + 1 ) * ( d2e - d2s + 1 ) * ( d1e - d1s + 1 ) |
---|
613 | ELSE |
---|
614 | wsize = 1 |
---|
615 | ENDIF |
---|
616 | |
---|
617 | wsize = wsize * 8 ! Please note, size is always in bytes, independently of the displacement |
---|
618 | ! unit |
---|
619 | |
---|
620 | CALL MPI_WIN_ALLOCATE_SHARED( wsize, 8, MPI_INFO_NULL, this%comm_shared, base_ptr, win, ierr ) |
---|
621 | ! |
---|
622 | !-- Get C-pointer of the memory located on node-rank pe_from (sh_rank == pe_from) |
---|
623 | CALL MPI_WIN_SHARED_QUERY( win, pe_from, rem_size, disp_unit, rem_ptr, ierr ) |
---|
624 | ! |
---|
625 | !-- Convert C- to Fortran-pointer |
---|
626 | buf_shape(3) = d3e - d3s + 1 |
---|
627 | buf_shape(2) = d2e - d2s + 1 |
---|
628 | buf_shape(1) = d1e - d1s + 1 |
---|
629 | CALL C_F_POINTER( rem_ptr, buf, buf_shape ) |
---|
630 | p3(d1s:,d2s:,d3s:) => buf |
---|
631 | ! |
---|
632 | !-- Allocate shared memory in round robin on all PEs of a node. |
---|
633 | pe_from = MOD( pe_from, this%sh_npes ) |
---|
634 | |
---|
635 | END SUBROUTINE sm_allocate_shared_3d |
---|
636 | #endif |
---|
637 | |
---|
638 | |
---|
639 | !--------------------------------------------------------------------------------------------------! |
---|
640 | ! Description: |
---|
641 | ! ------------ |
---|
642 | !> ??? |
---|
643 | !--------------------------------------------------------------------------------------------------! |
---|
644 | SUBROUTINE sm_adjust_outer_boundary( this ) |
---|
645 | |
---|
646 | IMPLICIT NONE |
---|
647 | |
---|
648 | CLASS(sm_class), INTENT(inout) :: this !< |
---|
649 | |
---|
650 | |
---|
651 | IF ( this%no_shared_memory_in_this_run ) RETURN |
---|
652 | |
---|
653 | IF ( this%io_grid%nxl == 0 ) THEN |
---|
654 | this%io_grid%nxl = this%io_grid%nxl - nbgp |
---|
655 | this%io_grid%nnx = this%io_grid%nnx + nbgp |
---|
656 | ENDIF |
---|
657 | |
---|
658 | IF ( this%io_grid%nxr == nx .OR. npex == -1 ) THEN ! npex == -1 if -D__parallel not set |
---|
659 | this%io_grid%nxr = this%io_grid%nxr + nbgp |
---|
660 | this%io_grid%nnx = this%io_grid%nnx + nbgp |
---|
661 | ENDIF |
---|
662 | |
---|
663 | IF ( this%io_grid%nys == 0 ) THEN |
---|
664 | this%io_grid%nys = this%io_grid%nys - nbgp |
---|
665 | this%io_grid%nny = this%io_grid%nny + nbgp |
---|
666 | ENDIF |
---|
667 | |
---|
668 | IF ( this%io_grid%nyn == ny .OR. npey == -1 ) THEN ! npey == -1 if -D__parallel not set |
---|
669 | this%io_grid%nyn = this%io_grid%nyn + nbgp |
---|
670 | this%io_grid%nny = this%io_grid%nny + nbgp |
---|
671 | ENDIF |
---|
672 | |
---|
673 | this%io_grid%nxl = this%io_grid%nxl + nbgp |
---|
674 | this%io_grid%nxr = this%io_grid%nxr + nbgp |
---|
675 | this%io_grid%nys = this%io_grid%nys + nbgp |
---|
676 | this%io_grid%nyn = this%io_grid%nyn + nbgp |
---|
677 | this%io_grid%nnx = this%io_grid%nnx |
---|
678 | this%io_grid%nny = this%io_grid%nny |
---|
679 | |
---|
680 | END SUBROUTINE sm_adjust_outer_boundary |
---|
681 | |
---|
682 | |
---|
683 | !--------------------------------------------------------------------------------------------------! |
---|
684 | ! Description: |
---|
685 | ! ------------ |
---|
686 | !> Deallocate shared aray and free related window. |
---|
687 | !--------------------------------------------------------------------------------------------------! |
---|
688 | SUBROUTINE sm_free_shared( this, win ) |
---|
689 | |
---|
690 | IMPLICIT NONE |
---|
691 | |
---|
692 | CLASS(sm_class), INTENT(inout) :: this !< |
---|
693 | |
---|
694 | INTEGER(iwp), INTENT(INOUT) :: win !< |
---|
695 | |
---|
696 | IF ( this%no_shared_memory_in_this_run .OR. win == -1234567890 ) RETURN |
---|
697 | ! win is used just to avoid compile errors because of unused arguments |
---|
698 | #if defined( __parallel ) |
---|
699 | CALL MPI_WIN_FREE( win, ierr ) |
---|
700 | #endif |
---|
701 | |
---|
702 | END SUBROUTINE sm_free_shared |
---|
703 | |
---|
704 | |
---|
705 | !--------------------------------------------------------------------------------------------------! |
---|
706 | ! Description: |
---|
707 | ! ------------ |
---|
708 | !> ... |
---|
709 | !--------------------------------------------------------------------------------------------------! |
---|
710 | SUBROUTINE sm_node_barrier( this ) |
---|
711 | |
---|
712 | IMPLICIT NONE |
---|
713 | |
---|
714 | CLASS(sm_class), INTENT(inout) :: this !< |
---|
715 | |
---|
716 | |
---|
717 | IF ( this%no_shared_memory_in_this_run ) RETURN |
---|
718 | |
---|
719 | #if defined( __parallel ) |
---|
720 | CALL MPI_BARRIER( this%comm_shared, ierr ) |
---|
721 | #endif |
---|
722 | |
---|
723 | END SUBROUTINE sm_node_barrier |
---|
724 | |
---|
725 | END MODULE shared_memory_io_mod |
---|