[4534] | 1 | !> @file shared_memory_io_mod.f90 |
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[4591] | 2 | !--------------------------------------------------------------------------------------------------! |
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| 3 | ! This file is part of the PALM model system. |
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[4534] | 4 | ! |
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[4591] | 5 | ! PALM is free software: you can redistribute it and/or modify it under the terms of the GNU General |
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| 6 | ! Public License as published by the Free Software Foundation, either version 3 of the License, or |
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| 7 | ! (at your option) any later version. |
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[4534] | 8 | ! |
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[4591] | 9 | ! PALM is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the |
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| 10 | ! implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General |
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| 11 | ! Public License for more details. |
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[4534] | 12 | ! |
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[4591] | 13 | ! You should have received a copy of the GNU General Public License along with PALM. If not, see |
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| 14 | ! <http://www.gnu.org/licenses/>. |
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[4534] | 15 | ! |
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| 16 | ! Copyright 1997-2020 Leibniz Universitaet Hannover |
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[4591] | 17 | !--------------------------------------------------------------------------------------------------! |
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[4534] | 18 | ! |
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[4591] | 19 | ! |
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[4534] | 20 | ! Current revisions: |
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| 21 | ! ----------------- |
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[4591] | 22 | ! |
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| 23 | ! |
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[4534] | 24 | ! Former revisions: |
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| 25 | ! $Id: shared_memory_io_mod.f90 4591 2020-07-06 15:56:08Z suehring $ |
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| 26 | ! |
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[4591] | 27 | ! File re-formatted to follow the PALM coding standard |
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[4534] | 28 | ! |
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[4591] | 29 | ! |
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[4534] | 30 | ! |
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[4591] | 31 | ! Initial version (Klaus Ketelsen) |
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[4534] | 32 | ! |
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[4591] | 33 | ! |
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| 34 | ! |
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[4534] | 35 | ! Description: |
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| 36 | ! ------------ |
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[4591] | 37 | !> Handle MPI-IO or NetCDF-IO shared memory arrays. |
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| 38 | !> This module performs the organization of new communicators, adapted PE-grids and allocation of |
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| 39 | !> shared memory arrays. The IO itself is not done here. |
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| 40 | !--------------------------------------------------------------------------------------------------! |
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[4534] | 41 | MODULE shared_memory_io_mod |
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| 42 | |
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| 43 | #if defined( __parallel ) |
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| 44 | #if defined( __mpifh ) |
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| 45 | INCLUDE "mpif.h" |
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| 46 | #else |
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| 47 | USE MPI |
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| 48 | #endif |
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| 49 | #endif |
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| 50 | |
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| 51 | USE, INTRINSIC :: ISO_C_BINDING |
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| 52 | |
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| 53 | USE control_parameters, & |
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[4591] | 54 | ONLY: maximum_grid_level, & |
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| 55 | message_string, & |
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| 56 | mg_switch_to_pe0_level |
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[4534] | 57 | |
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[4591] | 58 | |
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[4534] | 59 | USE indices, & |
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[4591] | 60 | ONLY: nbgp, & |
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| 61 | nnx, & |
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| 62 | nny, & |
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| 63 | nnz, & |
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| 64 | nx, & |
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| 65 | nxl, & |
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| 66 | nxlg, & |
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| 67 | nxr, & |
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| 68 | nxrg, & |
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| 69 | ny, & |
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| 70 | nyn, & |
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| 71 | nyng, & |
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| 72 | nys, & |
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| 73 | nysg, & |
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| 74 | nzb, & |
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| 75 | nzt |
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[4534] | 76 | |
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| 77 | USE kinds, & |
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[4591] | 78 | ONLY: iwp, & |
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| 79 | wp |
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[4534] | 80 | |
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[4591] | 81 | |
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[4534] | 82 | USE transpose_indices, & |
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[4591] | 83 | ONLY: nxl_z, & |
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| 84 | nxr_z, & |
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| 85 | nyn_x, & |
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| 86 | nyn_z, & |
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| 87 | nys_x, & |
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| 88 | nys_z |
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[4534] | 89 | |
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[4591] | 90 | |
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| 91 | |
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[4534] | 92 | USE pegrid, & |
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[4591] | 93 | ONLY: comm1dx, & |
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| 94 | comm1dy, & |
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| 95 | comm2d, & |
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| 96 | ierr, & |
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| 97 | myid, & |
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| 98 | myidx, & |
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| 99 | myidy, & |
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| 100 | npex, & |
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| 101 | npey, & |
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| 102 | numprocs, & |
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| 103 | pdims, & |
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| 104 | pleft, & |
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| 105 | pnorth, & |
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| 106 | pright, & |
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| 107 | psouth, & |
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| 108 | sendrecvcount_xy |
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| 109 | |
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[4534] | 110 | #if defined( __parallel ) |
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| 111 | USE pegrid, & |
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[4591] | 112 | ONLY: pcoord, & |
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| 113 | reorder |
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[4534] | 114 | #endif |
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| 115 | |
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| 116 | IMPLICIT NONE |
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| 117 | |
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| 118 | PRIVATE |
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| 119 | |
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| 120 | SAVE |
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| 121 | |
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| 122 | ! |
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| 123 | !-- Type to store grid information |
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[4591] | 124 | TYPE, PUBLIC :: local_boundaries !< |
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[4534] | 125 | |
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[4591] | 126 | INTEGER(iwp) :: nnx !< |
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| 127 | INTEGER(iwp) :: nny !< |
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| 128 | INTEGER(iwp) :: nx !< |
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| 129 | INTEGER(iwp) :: nxl !< |
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| 130 | INTEGER(iwp) :: nxr !< |
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| 131 | INTEGER(iwp) :: ny !< |
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| 132 | INTEGER(iwp) :: nyn !< |
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| 133 | INTEGER(iwp) :: nys !< |
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[4534] | 134 | |
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[4591] | 135 | |
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| 136 | |
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| 137 | |
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[4534] | 138 | END TYPE local_boundaries |
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| 139 | |
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| 140 | ! |
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| 141 | !-- Class definition for shared memory instances. |
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| 142 | !-- For every use of shared memory IO, one instance of this class is created. |
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[4591] | 143 | TYPE, PUBLIC :: sm_class !< |
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[4534] | 144 | |
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[4591] | 145 | INTEGER(iwp) :: nr_io_pe_per_node = 2 !< typical configuration, 2 sockets per node |
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| 146 | LOGICAL :: no_shared_Memory_in_this_run !< |
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[4534] | 147 | ! |
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| 148 | !-- Variables for the shared memory communicator |
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[4591] | 149 | INTEGER(iwp), PUBLIC :: comm_shared !< Communicator for processes with shared array |
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| 150 | INTEGER(iwp), PUBLIC :: sh_npes !< |
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| 151 | INTEGER(iwp), PUBLIC :: sh_rank !< |
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[4534] | 152 | |
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| 153 | LOGICAL, PUBLIC :: iam_io_pe = .TRUE. !< This PE is an IO-PE |
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| 154 | ! |
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| 155 | !-- Variables for the I/O virtual grid |
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[4591] | 156 | INTEGER(iwp), PUBLIC :: comm_io !< Communicator for all IO processes |
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| 157 | INTEGER(iwp), PUBLIC :: io_npes !< |
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| 158 | INTEGER(iwp), PUBLIC :: io_rank !< |
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[4534] | 159 | |
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| 160 | TYPE( local_boundaries ), PUBLIC :: io_grid |
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| 161 | |
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| 162 | ! |
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| 163 | !-- Variables for the node local communicator |
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[4591] | 164 | INTEGER(iwp) :: comm_node !< Communicator for all processes of current node |
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| 165 | INTEGER(iwp) :: io_pe_global_rank !< |
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| 166 | INTEGER(iwp) :: n_npes !< |
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| 167 | INTEGER(iwp) :: n_rank !< |
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[4534] | 168 | |
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[4591] | 169 | CONTAINS |
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[4534] | 170 | |
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[4591] | 171 | PRIVATE |
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[4534] | 172 | |
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[4591] | 173 | PROCEDURE, PASS(this), PUBLIC :: is_sm_active !< |
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| 174 | PROCEDURE, PASS(this), PUBLIC :: sm_adjust_outer_boundary !< |
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| 175 | PROCEDURE, PASS(this), PUBLIC :: sm_free_shared !< |
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| 176 | PROCEDURE, PASS(this), PUBLIC :: sm_init_comm !< |
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| 177 | PROCEDURE, PASS(this), PUBLIC :: sm_node_barrier !< |
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[4534] | 178 | #if defined( __parallel ) |
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[4591] | 179 | PROCEDURE, PASS(this), PUBLIC :: sm_allocate_shared_1d !< |
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| 180 | PROCEDURE, PASS(this), PUBLIC :: sm_allocate_shared_2d !< |
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| 181 | PROCEDURE, PASS(this), PUBLIC :: sm_allocate_shared_2di !< |
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| 182 | PROCEDURE, PASS(this), PUBLIC :: sm_allocate_shared_3d !< |
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[4534] | 183 | |
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| 184 | GENERIC, PUBLIC :: sm_allocate_shared => sm_allocate_shared_1d, sm_allocate_shared_2d, & |
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[4591] | 185 | sm_allocate_shared_2di, sm_allocate_shared_3d !< |
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[4534] | 186 | #endif |
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| 187 | END TYPE sm_class |
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| 188 | |
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| 189 | |
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[4591] | 190 | CONTAINS |
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[4534] | 191 | |
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| 192 | |
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| 193 | !--------------------------------------------------------------------------------------------------! |
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| 194 | ! Description: |
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| 195 | ! ------------ |
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| 196 | !> Create the communicator for shared memory groups and IO-PEs. |
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| 197 | !> Setup the grid for shared memory IO. |
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| 198 | !--------------------------------------------------------------------------------------------------! |
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| 199 | SUBROUTINE sm_init_comm( this, sm_active ) |
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| 200 | |
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| 201 | IMPLICIT NONE |
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| 202 | |
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| 203 | CLASS(sm_class), INTENT(INOUT) :: this !< pointer to access internal variables of this call |
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| 204 | |
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| 205 | #if defined( __parallel ) |
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[4591] | 206 | INTEGER :: color !< |
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| 207 | INTEGER :: max_n_npes !< Maximum number of PEs/node |
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[4534] | 208 | #endif |
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| 209 | |
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| 210 | LOGICAL, INTENT(IN) :: sm_active !< Flag to activate shared-memory IO |
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| 211 | |
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| 212 | |
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| 213 | this%no_shared_memory_in_this_run = .NOT. sm_active |
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| 214 | |
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| 215 | IF ( this%no_shared_memory_in_this_run ) THEN |
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| 216 | this%iam_io_pe = .TRUE. |
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| 217 | RETURN |
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| 218 | ENDIF |
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| 219 | |
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| 220 | #if defined( __parallel ) |
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| 221 | ! |
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| 222 | !-- Determine, how many MPI threads are running on a node |
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| 223 | this%iam_io_pe = .FALSE. |
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| 224 | CALL MPI_COMM_SPLIT_TYPE( comm2d, MPI_COMM_TYPE_SHARED, 0, MPI_INFO_NULL, this%comm_node, ierr ) |
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| 225 | CALL MPI_COMM_SIZE( this%comm_node, this%n_npes, ierr ) |
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| 226 | CALL MPI_COMM_RANK( this%comm_node, this%n_rank, ierr ) |
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| 227 | |
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| 228 | CALL MPI_ALLREDUCE( this%n_npes, max_n_npes, 1, MPI_INTEGER, MPI_MAX, comm2d, ierr ) |
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| 229 | ! |
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| 230 | !-- Decide, if the configuration can run with shared-memory IO |
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| 231 | IF ( max_n_npes > 64 ) THEN |
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| 232 | ! |
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| 233 | !-- Special configuration on the HLRN-IV system with 4 shared memory blocks/node |
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| 234 | this%nr_io_pe_per_node = 4 |
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| 235 | |
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| 236 | ELSEIF ( max_n_npes <= 32 ) THEN |
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| 237 | ! |
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| 238 | !-- No shared memory IO with less than 32 threads/node |
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| 239 | this%no_shared_memory_in_this_run = .TRUE. |
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| 240 | this%iam_io_pe = .TRUE. |
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| 241 | RETURN |
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| 242 | ENDIF |
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| 243 | |
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| 244 | ! |
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| 245 | !-- No shared memory IO with small setups |
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| 246 | IF ( nx < 24 .OR. ny < 24 ) THEN |
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| 247 | this%no_shared_memory_in_this_run = .TRUE. |
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| 248 | this%iam_io_pe = .TRUE. |
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| 249 | RETURN |
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| 250 | ENDIF |
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| 251 | |
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| 252 | ! |
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| 253 | !-- Divide a node into shared memory groups, depending on the virtual x-y grid |
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| 254 | CALL compute_color( color ) |
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| 255 | ! |
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| 256 | !-- If no shared memory IO possible, nothing is left to be done here. |
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| 257 | IF ( this%no_shared_memory_in_this_run ) RETURN |
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| 258 | |
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| 259 | ! |
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| 260 | !-- Setup the shared memory area |
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| 261 | CALL MPI_COMM_SPLIT( this%comm_node, color, 0, this%comm_shared, ierr ) |
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| 262 | CALL MPI_COMM_SIZE( this%comm_shared, this%sh_npes, ierr ) |
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| 263 | CALL MPI_COMM_RANK( this%comm_shared, this%sh_rank, ierr ) |
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| 264 | |
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| 265 | ! |
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| 266 | !-- Setup the communicator across the nodes depending on the shared memory rank. |
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| 267 | !-- All threads with shared memory rank 0 will be I/O threads. |
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| 268 | color = this%sh_rank |
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| 269 | CALL MPI_COMM_SPLIT( comm2d, color, 0, this%comm_io, ierr ) |
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| 270 | |
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| 271 | IF ( this%comm_io /= MPI_COMM_NULL ) THEN |
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| 272 | CALL MPI_COMM_SIZE( this%comm_io, this%io_npes, ierr ) |
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| 273 | CALL MPI_COMM_RANK( this%comm_io, this%io_rank, ierr ) |
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| 274 | ELSE |
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| 275 | this%io_npes = -1 |
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| 276 | this%io_rank = -1 |
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| 277 | ENDIF |
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| 278 | |
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| 279 | IF ( this%sh_rank == 0 ) THEN |
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| 280 | this%iam_io_pe = .TRUE. |
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| 281 | this%io_pe_global_rank = myid |
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| 282 | ENDIF |
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| 283 | CALL MPI_BCAST( this%io_pe_global_rank, 1, MPI_INTEGER, 0, this%comm_shared, ierr ) |
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| 284 | |
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| 285 | #else |
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| 286 | this%iam_io_pe = .TRUE. |
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| 287 | #endif |
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| 288 | |
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| 289 | #if defined( __parallel ) |
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| 290 | CONTAINS |
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| 291 | |
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| 292 | SUBROUTINE compute_color( color ) |
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| 293 | |
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| 294 | IMPLICIT NONE |
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| 295 | |
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[4591] | 296 | INTEGER(iwp), INTENT(OUT) :: color !< |
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[4534] | 297 | |
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[4591] | 298 | INTEGER(iwp) :: group_start !< |
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| 299 | INTEGER(iwp) :: my_color !< |
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| 300 | INTEGER(iwp) :: n !< |
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| 301 | INTEGER(iwp) :: pe !< |
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| 302 | INTEGER(iwp) :: sh_group_size !< |
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[4534] | 303 | |
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[4591] | 304 | INTEGER(iwp), DIMENSION(4,0:this%n_npes-1) :: local_dim_s !< |
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| 305 | INTEGER(iwp), DIMENSION(4,0:this%n_npes-1) :: local_dim_r !< |
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[4534] | 306 | |
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[4591] | 307 | TYPE(local_boundaries), DIMENSION(32) :: node_grid !< |
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[4534] | 308 | |
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[4536] | 309 | ! |
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[4591] | 310 | !-- No shared memory I/O on one node jobs |
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[4536] | 311 | IF ( numprocs < this%n_npes ) THEN |
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| 312 | this%no_shared_memory_in_this_run = .TRUE. |
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[4534] | 313 | RETURN |
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| 314 | ENDIF |
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| 315 | |
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| 316 | local_dim_s = 0 |
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| 317 | local_dim_s(1,this%n_rank) = nxl |
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| 318 | local_dim_s(2,this%n_rank) = nxr |
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| 319 | local_dim_s(3,this%n_rank) = nys |
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| 320 | local_dim_s(4,this%n_rank) = nyn |
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| 321 | |
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| 322 | node_grid%nyn = -1 |
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| 323 | ! |
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| 324 | !-- Distribute the x-y layout of all cores of a node to all node processes |
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| 325 | CALL MPI_ALLREDUCE( local_dim_s, local_dim_r, SIZE( local_dim_s ), MPI_INTEGER, MPI_SUM, & |
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| 326 | this%comm_node, ierr ) |
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| 327 | sh_group_size = ( max_n_npes + this%nr_io_pe_per_node - 1 ) / this%nr_io_pe_per_node |
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| 328 | |
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| 329 | pe = 0 |
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| 330 | my_color = 1 ! color is used to split the shared memory communicator into a communicator for |
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| 331 | ! io groups |
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| 332 | group_start = pe |
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| 333 | node_grid(my_color)%nxl = local_dim_r(1,group_start) |
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| 334 | node_grid(my_color)%nxr = local_dim_r(2,group_start) |
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| 335 | node_grid(my_color)%nys = local_dim_r(3,group_start) |
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| 336 | |
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| 337 | DO n = 1, this%n_npes-1 |
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| 338 | |
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| 339 | pe = n |
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| 340 | IF ( n > 0 .AND. MOD( n,sh_group_size ) == 0 ) THEN |
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| 341 | ! |
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| 342 | !-- If group boundary, start new IO group |
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| 343 | node_grid(my_color)%nyn = local_dim_r(4,pe-1) |
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| 344 | my_color = my_color + 1 |
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| 345 | group_start = pe |
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| 346 | node_grid(my_color)%nxl = local_dim_r(1,group_start) |
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| 347 | node_grid(my_color)%nxr = local_dim_r(2,group_start) |
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| 348 | node_grid(my_color)%nys = local_dim_r(3,group_start) |
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| 349 | |
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| 350 | ELSEIF ( local_dim_r(1,pe) /= node_grid(my_color)%nxl ) THEN |
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| 351 | ! |
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| 352 | !-- If nxl changes, start new IO group |
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| 353 | node_grid(my_color)%nyn = local_dim_r(4,pe-1) |
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| 354 | my_color = my_color+1 |
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| 355 | group_start = pe |
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| 356 | node_grid(my_color)%nxl = local_dim_r(1,group_start) |
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| 357 | node_grid(my_color)%nxr = local_dim_r(2,group_start) |
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| 358 | node_grid(my_color)%nys = local_dim_r(3,group_start) |
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| 359 | ENDIF |
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| 360 | ! |
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| 361 | !-- Save values for local PE |
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| 362 | IF ( this%n_rank == pe ) THEN ! |
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| 363 | color = my_color |
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| 364 | ENDIF |
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| 365 | IF ( n == this%n_npes-1 ) node_grid(my_color)%nyn = local_dim_r(4,pe) |
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| 366 | |
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| 367 | ENDDO |
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| 368 | |
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| 369 | IF ( this%n_rank == 0 ) THEN |
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| 370 | color = 1 |
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| 371 | ENDIF |
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| 372 | |
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[4536] | 373 | this%io_grid = node_grid(color) |
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| 374 | this%io_grid%nnx = this%io_grid%nxr - this%io_grid%nxl + 1 |
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| 375 | this%io_grid%nny = this%io_grid%nyn - this%io_grid%nys + 1 |
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| 376 | |
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[4534] | 377 | END SUBROUTINE compute_color |
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| 378 | #endif |
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| 379 | |
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| 380 | END SUBROUTINE sm_init_comm |
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| 381 | |
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| 382 | |
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| 383 | |
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| 384 | !--------------------------------------------------------------------------------------------------! |
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| 385 | ! Description: |
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| 386 | ! ------------ |
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| 387 | !> Function to return if shared Memory IO is active. |
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| 388 | !--------------------------------------------------------------------------------------------------! |
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[4591] | 389 | FUNCTION is_sm_active( this ) RESULT( ac ) |
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[4534] | 390 | |
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| 391 | IMPLICIT NONE |
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| 392 | |
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[4591] | 393 | CLASS(sm_class), INTENT(inout) :: this !< |
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[4534] | 394 | |
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[4591] | 395 | LOGICAL :: ac !< |
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[4534] | 396 | |
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| 397 | ac = .NOT. this%no_shared_memory_in_this_run |
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| 398 | |
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| 399 | END FUNCTION is_sm_active |
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| 400 | |
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| 401 | |
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| 402 | #if defined( __parallel ) |
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| 403 | !--------------------------------------------------------------------------------------------------! |
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| 404 | ! Description: |
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| 405 | ! ------------ |
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| 406 | !> Allocate shared 1d-REAL array on ALL threads |
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| 407 | !--------------------------------------------------------------------------------------------------! |
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| 408 | SUBROUTINE sm_allocate_shared_1d( this, p1, d1, d2, win ) |
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| 409 | |
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| 410 | IMPLICIT NONE |
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| 411 | |
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[4591] | 412 | CLASS(sm_class), INTENT(inout) :: this !< |
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| 413 | !< |
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| 414 | INTEGER(iwp) :: disp_unit !< |
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| 415 | INTEGER(iwp), INTENT(IN) :: d1 !< |
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| 416 | INTEGER(iwp), INTENT(IN) :: d2 !< |
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| 417 | INTEGER(iwp), SAVE :: pe_from = 0 !< |
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| 418 | INTEGER(KIND=MPI_ADDRESS_KIND) :: rem_size !< |
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| 419 | INTEGER(iwp), INTENT(OUT) :: win !< |
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| 420 | INTEGER(KIND=MPI_ADDRESS_KIND) :: wsize !< |
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[4534] | 421 | |
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[4591] | 422 | INTEGER, DIMENSION(1) :: buf_shape !< |
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[4534] | 423 | |
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[4591] | 424 | REAL(wp), DIMENSION(:), POINTER :: buf !< |
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| 425 | REAL(wp), DIMENSION(:), POINTER :: p1 !< |
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[4534] | 426 | |
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[4591] | 427 | TYPE(C_PTR), SAVE :: base_ptr !< |
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| 428 | TYPE(C_PTR), SAVE :: rem_ptr !< |
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[4534] | 429 | |
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| 430 | |
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| 431 | IF ( this%no_shared_memory_in_this_run ) RETURN |
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| 432 | ! |
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| 433 | !-- Allocate shared memory on node rank 0 threads. |
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| 434 | IF ( this%sh_rank == pe_from ) THEN |
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| 435 | wsize = d2 - d1 + 1 |
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| 436 | ELSE |
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| 437 | wsize = 1 |
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| 438 | ENDIF |
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| 439 | wsize = wsize * 8 ! Please note, size is always in bytes, independently of the displacement |
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| 440 | ! unit |
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| 441 | |
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| 442 | CALL MPI_WIN_ALLOCATE_SHARED( wsize, 8, MPI_INFO_NULL, this%comm_shared,base_ptr, win, ierr ) |
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| 443 | ! |
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| 444 | !-- Get C-pointer of the memory located on node-rank pe_from (sh_rank == pe_from) |
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| 445 | CALL MPI_WIN_SHARED_QUERY( win, pe_from, rem_size, disp_unit, rem_ptr, ierr ) |
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| 446 | ! |
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| 447 | !-- Convert C- to Fortran-pointer |
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| 448 | buf_shape(1) = d2 - d1 + 1 |
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| 449 | CALL C_F_POINTER( rem_ptr, buf, buf_shape ) |
---|
| 450 | p1(d1:) => buf |
---|
| 451 | ! |
---|
| 452 | !-- Allocate shared memory in round robin on all PEs of a node. |
---|
| 453 | pe_from = MOD( pe_from, this%sh_npes ) |
---|
| 454 | |
---|
| 455 | END SUBROUTINE sm_allocate_shared_1d |
---|
| 456 | |
---|
| 457 | |
---|
| 458 | !--------------------------------------------------------------------------------------------------! |
---|
| 459 | ! Description: |
---|
| 460 | ! ------------ |
---|
| 461 | !> Allocate shared 2d-REAL array on ALL threads |
---|
| 462 | !--------------------------------------------------------------------------------------------------! |
---|
| 463 | SUBROUTINE sm_allocate_shared_2d( this, p2, n_nxlg, n_nxrg, n_nysg, n_nyng, win ) |
---|
| 464 | |
---|
| 465 | IMPLICIT NONE |
---|
| 466 | |
---|
[4591] | 467 | CLASS(sm_class), INTENT(INOUT) :: this !< |
---|
[4534] | 468 | |
---|
[4591] | 469 | INTEGER(iwp) :: disp_unit !< |
---|
| 470 | INTEGER(iwp), INTENT(IN) :: n_nxlg !< |
---|
| 471 | INTEGER(iwp), INTENT(IN) :: n_nxrg !< |
---|
| 472 | INTEGER(iwp), INTENT(IN) :: n_nyng !< |
---|
| 473 | INTEGER(iwp), INTENT(IN) :: n_nysg !< |
---|
| 474 | INTEGER(iwp), SAVE :: pe_from = 0 !< |
---|
| 475 | INTEGER(KIND=MPI_ADDRESS_KIND) :: rem_size !< |
---|
| 476 | INTEGER(iwp), INTENT(OUT) :: win !< |
---|
| 477 | INTEGER(KIND=MPI_ADDRESS_KIND) :: wsize !< |
---|
[4534] | 478 | |
---|
[4591] | 479 | INTEGER(iwp), DIMENSION(2) :: buf_shape !< |
---|
[4534] | 480 | |
---|
[4591] | 481 | REAL(wp), DIMENSION(:,:), POINTER :: buf !< |
---|
| 482 | REAL(wp), DIMENSION(:,:), POINTER :: p2 !< |
---|
[4534] | 483 | |
---|
[4591] | 484 | TYPE(C_PTR),SAVE :: base_ptr !< |
---|
| 485 | TYPE(C_PTR),SAVE :: rem_ptr !< |
---|
[4534] | 486 | |
---|
| 487 | |
---|
| 488 | IF ( this%no_shared_memory_in_this_run ) RETURN |
---|
| 489 | ! |
---|
| 490 | !-- Allocate shared memory on node rank 0 threads. |
---|
| 491 | IF ( this%sh_rank == pe_from ) THEN |
---|
| 492 | wsize = ( n_nyng - n_nysg + 1 ) * ( n_nxrg - n_nxlg + 1 ) |
---|
| 493 | ELSE |
---|
| 494 | wsize = 1 |
---|
| 495 | ENDIF |
---|
| 496 | |
---|
| 497 | wsize = wsize * 8 ! Please note, size is always in bytes, independently of the displacement |
---|
| 498 | ! unit |
---|
| 499 | |
---|
| 500 | CALL MPI_WIN_ALLOCATE_SHARED( wsize, 8, MPI_INFO_NULL, this%comm_shared, base_ptr, win, ierr ) |
---|
| 501 | ! |
---|
| 502 | !-- Get C-pointer of the memory located on node-rank pe_from (sh_rank == pe_from) |
---|
| 503 | CALL MPI_WIN_SHARED_QUERY( win, pe_from, rem_size, disp_unit, rem_ptr, ierr ) |
---|
| 504 | ! |
---|
| 505 | !-- Convert C- to Fortran-pointer |
---|
| 506 | buf_shape(2) = n_nyng - n_nysg + 1 |
---|
| 507 | buf_shape(1) = n_nxrg - n_nxlg + 1 |
---|
| 508 | CALL C_F_POINTER( rem_ptr, buf, buf_shape ) |
---|
| 509 | p2(n_nxlg:, n_nysg:) => buf |
---|
| 510 | ! |
---|
| 511 | !-- Allocate shared memory in round robin on all PEs of a node. |
---|
| 512 | pe_from = MOD( pe_from, this%sh_npes ) |
---|
| 513 | |
---|
| 514 | END SUBROUTINE sm_allocate_shared_2d |
---|
| 515 | |
---|
| 516 | |
---|
| 517 | !--------------------------------------------------------------------------------------------------! |
---|
| 518 | ! Description: |
---|
| 519 | ! ------------ |
---|
| 520 | !> Allocate shared 2d-INTEGER array on ALL threads |
---|
| 521 | !--------------------------------------------------------------------------------------------------! |
---|
| 522 | SUBROUTINE sm_allocate_shared_2di( this, p2i, n_nxlg, n_nxrg, n_nysg, n_nyng, win ) |
---|
| 523 | |
---|
| 524 | IMPLICIT NONE |
---|
| 525 | |
---|
[4591] | 526 | CLASS(sm_class), INTENT(inout) :: this !< |
---|
[4534] | 527 | |
---|
[4591] | 528 | INTEGER(iwp) :: disp_unit !< |
---|
| 529 | INTEGER(iwp), INTENT(IN) :: n_nxlg !< |
---|
| 530 | INTEGER(iwp), INTENT(IN) :: n_nxrg !< |
---|
| 531 | INTEGER(iwp), INTENT(IN) :: n_nyng !< |
---|
| 532 | INTEGER(iwp), INTENT(IN) :: n_nysg !< |
---|
| 533 | INTEGER(iwp), SAVE :: pe_from = 0 !< |
---|
| 534 | INTEGER(kind=MPI_ADDRESS_KIND) :: rem_size !< |
---|
| 535 | INTEGER(iwp), INTENT(OUT) :: win !< |
---|
| 536 | INTEGER(kind=MPI_ADDRESS_KIND) :: wsize !< |
---|
[4534] | 537 | |
---|
[4591] | 538 | INTEGER(iwp), DIMENSION(2) :: buf_shape !< |
---|
[4534] | 539 | |
---|
[4591] | 540 | INTEGER(iwp), DIMENSION(:,:), POINTER :: buf !< |
---|
| 541 | INTEGER(iwp), DIMENSION(:,:), POINTER :: p2i !< |
---|
[4534] | 542 | |
---|
[4591] | 543 | TYPE(C_PTR),SAVE :: base_ptr !< |
---|
| 544 | TYPE(C_PTR),SAVE :: rem_ptr !< |
---|
[4534] | 545 | |
---|
| 546 | |
---|
| 547 | IF ( this%no_shared_memory_in_this_run ) RETURN |
---|
| 548 | ! |
---|
| 549 | !-- Allocate shared memory on node rank 0 threads. |
---|
| 550 | IF ( this%sh_rank == pe_from ) THEN |
---|
| 551 | wsize = ( n_nyng - n_nysg + 1 ) * ( n_nxrg - n_nxlg + 1 ) |
---|
| 552 | ELSE |
---|
| 553 | wsize = 1 |
---|
| 554 | ENDIF |
---|
| 555 | |
---|
| 556 | wsize = wsize * 4 ! Please note, size is always in bytes, independently of the displacement |
---|
| 557 | ! unit |
---|
| 558 | |
---|
| 559 | CALL MPI_WIN_ALLOCATE_SHARED( wsize, 4, MPI_INFO_NULL, this%comm_shared, base_ptr, win, ierr ) |
---|
| 560 | ! |
---|
| 561 | !-- Get C-pointer of the memory located on node-rank pe_from (sh_rank == pe_from) |
---|
| 562 | CALL MPI_WIN_SHARED_QUERY( win, pe_from, rem_size, disp_unit, rem_ptr, ierr ) |
---|
| 563 | ! |
---|
| 564 | !-- Convert C- to Fortran-pointer |
---|
| 565 | buf_shape(2) = n_nyng - n_nysg + 1 |
---|
| 566 | buf_shape(1) = n_nxrg - n_nxlg + 1 |
---|
| 567 | CALL C_F_POINTER( rem_ptr, buf, buf_shape ) |
---|
| 568 | p2i(n_nxlg:, n_nysg:) => buf |
---|
| 569 | ! |
---|
| 570 | !-- Allocate shared memory in round robin on all PEs of a node. |
---|
| 571 | pe_from = MOD( pe_from, this%sh_npes ) |
---|
| 572 | |
---|
| 573 | END SUBROUTINE sm_allocate_shared_2di |
---|
| 574 | |
---|
| 575 | |
---|
| 576 | !--------------------------------------------------------------------------------------------------! |
---|
| 577 | ! Description: |
---|
| 578 | ! ------------ |
---|
| 579 | !> Allocate shared 3d-REAL array on ALL threads |
---|
| 580 | !--------------------------------------------------------------------------------------------------! |
---|
| 581 | SUBROUTINE sm_allocate_shared_3d( this, p3, d1s, d1e, d2s, d2e, d3s, d3e, win ) |
---|
| 582 | |
---|
| 583 | IMPLICIT NONE |
---|
| 584 | |
---|
[4591] | 585 | CLASS(sm_class), INTENT(inout) :: this !< |
---|
[4534] | 586 | |
---|
[4591] | 587 | INTEGER :: disp_unit !< |
---|
| 588 | INTEGER, INTENT(IN) :: d1e !< |
---|
| 589 | INTEGER, INTENT(IN) :: d1s !< |
---|
| 590 | INTEGER, INTENT(IN) :: d2e !< |
---|
| 591 | INTEGER, INTENT(IN) :: d2s !< |
---|
| 592 | INTEGER, INTENT(IN) :: d3e !< |
---|
| 593 | INTEGER, INTENT(IN) :: d3s !< |
---|
| 594 | INTEGER, SAVE :: pe_from = 0 !< |
---|
| 595 | INTEGER(KIND=MPI_ADDRESS_KIND) :: rem_size !< |
---|
| 596 | INTEGER, INTENT(OUT) :: win !< |
---|
| 597 | INTEGER(KIND=MPI_ADDRESS_KIND) :: wsize !< |
---|
[4534] | 598 | |
---|
[4591] | 599 | INTEGER, DIMENSION(3) :: buf_shape !< |
---|
[4534] | 600 | |
---|
[4591] | 601 | REAL(wp), DIMENSION(:,:,:), POINTER :: buf !< |
---|
| 602 | REAL(wp), DIMENSION(:,:,:), POINTER :: p3 !< |
---|
[4534] | 603 | |
---|
[4591] | 604 | TYPE(C_PTR), SAVE :: base_ptr !< |
---|
| 605 | TYPE(C_PTR), SAVE :: rem_ptr !< |
---|
[4534] | 606 | |
---|
| 607 | |
---|
| 608 | IF ( this%no_shared_memory_in_this_run ) RETURN |
---|
| 609 | ! |
---|
| 610 | !-- Allocate shared memory on node rank 0 threads. |
---|
| 611 | IF ( this%sh_rank == pe_from ) THEN |
---|
| 612 | wsize = ( d3e - d3s + 1 ) * ( d2e - d2s + 1 ) * ( d1e - d1s + 1 ) |
---|
| 613 | ELSE |
---|
| 614 | wsize = 1 |
---|
| 615 | ENDIF |
---|
| 616 | |
---|
| 617 | wsize = wsize * 8 ! Please note, size is always in bytes, independently of the displacement |
---|
| 618 | ! unit |
---|
| 619 | |
---|
| 620 | CALL MPI_WIN_ALLOCATE_SHARED( wsize, 8, MPI_INFO_NULL, this%comm_shared, base_ptr, win, ierr ) |
---|
| 621 | ! |
---|
| 622 | !-- Get C-pointer of the memory located on node-rank pe_from (sh_rank == pe_from) |
---|
| 623 | CALL MPI_WIN_SHARED_QUERY( win, pe_from, rem_size, disp_unit, rem_ptr, ierr ) |
---|
| 624 | ! |
---|
| 625 | !-- Convert C- to Fortran-pointer |
---|
| 626 | buf_shape(3) = d3e - d3s + 1 |
---|
| 627 | buf_shape(2) = d2e - d2s + 1 |
---|
| 628 | buf_shape(1) = d1e - d1s + 1 |
---|
| 629 | CALL C_F_POINTER( rem_ptr, buf, buf_shape ) |
---|
| 630 | p3(d1s:,d2s:,d3s:) => buf |
---|
| 631 | ! |
---|
| 632 | !-- Allocate shared memory in round robin on all PEs of a node. |
---|
| 633 | pe_from = MOD( pe_from, this%sh_npes ) |
---|
| 634 | |
---|
| 635 | END SUBROUTINE sm_allocate_shared_3d |
---|
| 636 | #endif |
---|
| 637 | |
---|
| 638 | |
---|
| 639 | !--------------------------------------------------------------------------------------------------! |
---|
| 640 | ! Description: |
---|
| 641 | ! ------------ |
---|
| 642 | !> ??? |
---|
| 643 | !--------------------------------------------------------------------------------------------------! |
---|
| 644 | SUBROUTINE sm_adjust_outer_boundary( this ) |
---|
| 645 | |
---|
| 646 | IMPLICIT NONE |
---|
| 647 | |
---|
[4591] | 648 | CLASS(sm_class), INTENT(inout) :: this !< |
---|
[4534] | 649 | |
---|
| 650 | |
---|
| 651 | IF ( this%no_shared_memory_in_this_run ) RETURN |
---|
| 652 | |
---|
| 653 | IF ( this%io_grid%nxl == 0 ) THEN |
---|
| 654 | this%io_grid%nxl = this%io_grid%nxl - nbgp |
---|
| 655 | this%io_grid%nnx = this%io_grid%nnx + nbgp |
---|
| 656 | ENDIF |
---|
| 657 | |
---|
| 658 | IF ( this%io_grid%nxr == nx .OR. npex == -1 ) THEN ! npex == -1 if -D__parallel not set |
---|
| 659 | this%io_grid%nxr = this%io_grid%nxr + nbgp |
---|
| 660 | this%io_grid%nnx = this%io_grid%nnx + nbgp |
---|
| 661 | ENDIF |
---|
| 662 | |
---|
| 663 | IF ( this%io_grid%nys == 0 ) THEN |
---|
| 664 | this%io_grid%nys = this%io_grid%nys - nbgp |
---|
| 665 | this%io_grid%nny = this%io_grid%nny + nbgp |
---|
| 666 | ENDIF |
---|
| 667 | |
---|
| 668 | IF ( this%io_grid%nyn == ny .OR. npey == -1 ) THEN ! npey == -1 if -D__parallel not set |
---|
| 669 | this%io_grid%nyn = this%io_grid%nyn + nbgp |
---|
| 670 | this%io_grid%nny = this%io_grid%nny + nbgp |
---|
| 671 | ENDIF |
---|
| 672 | |
---|
| 673 | this%io_grid%nxl = this%io_grid%nxl + nbgp |
---|
| 674 | this%io_grid%nxr = this%io_grid%nxr + nbgp |
---|
| 675 | this%io_grid%nys = this%io_grid%nys + nbgp |
---|
| 676 | this%io_grid%nyn = this%io_grid%nyn + nbgp |
---|
| 677 | this%io_grid%nnx = this%io_grid%nnx |
---|
| 678 | this%io_grid%nny = this%io_grid%nny |
---|
| 679 | |
---|
| 680 | END SUBROUTINE sm_adjust_outer_boundary |
---|
| 681 | |
---|
| 682 | |
---|
| 683 | !--------------------------------------------------------------------------------------------------! |
---|
| 684 | ! Description: |
---|
| 685 | ! ------------ |
---|
| 686 | !> Deallocate shared aray and free related window. |
---|
| 687 | !--------------------------------------------------------------------------------------------------! |
---|
| 688 | SUBROUTINE sm_free_shared( this, win ) |
---|
| 689 | |
---|
| 690 | IMPLICIT NONE |
---|
| 691 | |
---|
[4591] | 692 | CLASS(sm_class), INTENT(inout) :: this !< |
---|
[4534] | 693 | |
---|
[4591] | 694 | INTEGER(iwp), INTENT(INOUT) :: win !< |
---|
[4534] | 695 | |
---|
| 696 | IF ( this%no_shared_memory_in_this_run .OR. win == -1234567890 ) RETURN |
---|
| 697 | ! win is used just to avoid compile errors because of unused arguments |
---|
| 698 | #if defined( __parallel ) |
---|
| 699 | CALL MPI_WIN_FREE( win, ierr ) |
---|
| 700 | #endif |
---|
| 701 | |
---|
| 702 | END SUBROUTINE sm_free_shared |
---|
| 703 | |
---|
| 704 | |
---|
| 705 | !--------------------------------------------------------------------------------------------------! |
---|
| 706 | ! Description: |
---|
| 707 | ! ------------ |
---|
| 708 | !> ... |
---|
| 709 | !--------------------------------------------------------------------------------------------------! |
---|
| 710 | SUBROUTINE sm_node_barrier( this ) |
---|
| 711 | |
---|
| 712 | IMPLICIT NONE |
---|
| 713 | |
---|
[4591] | 714 | CLASS(sm_class), INTENT(inout) :: this !< |
---|
[4534] | 715 | |
---|
| 716 | |
---|
| 717 | IF ( this%no_shared_memory_in_this_run ) RETURN |
---|
| 718 | |
---|
| 719 | #if defined( __parallel ) |
---|
| 720 | CALL MPI_BARRIER( this%comm_shared, ierr ) |
---|
| 721 | #endif |
---|
| 722 | |
---|
| 723 | END SUBROUTINE sm_node_barrier |
---|
| 724 | |
---|
| 725 | END MODULE shared_memory_io_mod |
---|