[4495] | 1 | !> @file posix_interface_mod.f90 |
---|
[4649] | 2 | !--------------------------------------------------------------------------------------------------! |
---|
[4495] | 3 | ! This file is part of the PALM model system. |
---|
| 4 | ! |
---|
| 5 | ! PALM is free software: you can redistribute it and/or modify it under the terms of the GNU General |
---|
| 6 | ! Public License as published by the Free Software Foundation, either version 3 of the License, or |
---|
| 7 | ! (at your option) any later version. |
---|
| 8 | ! |
---|
| 9 | ! PALM is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the |
---|
| 10 | ! implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General |
---|
| 11 | ! Public License for more details. |
---|
| 12 | ! |
---|
| 13 | ! You should have received a copy of the GNU General Public License along with PALM. If not, see |
---|
| 14 | ! <http://www.gnu.org/licenses/>. |
---|
| 15 | ! |
---|
[4828] | 16 | ! Copyright 1997-2021 Leibniz Universitaet Hannover |
---|
[4649] | 17 | !--------------------------------------------------------------------------------------------------! |
---|
[4495] | 18 | ! |
---|
[4649] | 19 | ! |
---|
[4495] | 20 | ! Current revisions: |
---|
| 21 | ! ----------------- |
---|
[4628] | 22 | ! |
---|
| 23 | ! |
---|
[4495] | 24 | ! Former revisions: |
---|
| 25 | ! ----------------- |
---|
| 26 | ! $Id: posix_interface_mod.f90 4828 2021-01-05 11:21:41Z raasch $ |
---|
[4652] | 27 | ! Routine fortran_sleep moved from old module posix_calls_from_fortran to here |
---|
| 28 | ! |
---|
| 29 | ! 4649 2020-08-25 12:11:17Z raasch |
---|
[4649] | 30 | ! File re-formatted to follow the PALM coding standard |
---|
| 31 | ! |
---|
| 32 | ! |
---|
| 33 | ! 4628 2020-07-29 07:23:03Z raasch |
---|
| 34 | ! Extensions required for MPI-I/O of particle data to restart files |
---|
| 35 | ! |
---|
[4628] | 36 | ! 4495 2020-04-13 20:11:20Z raasch |
---|
[4495] | 37 | ! Initial version (K. Ketelsen) |
---|
| 38 | ! |
---|
| 39 | ! |
---|
[4649] | 40 | !--------------------------------------------------------------------------------------------------! |
---|
[4495] | 41 | ! Description: |
---|
| 42 | ! ------------ |
---|
[4649] | 43 | !> Interface to some POSIX system calls, mainly used for read/write of restart files in non-parallel |
---|
| 44 | !> mode in MPI-IO compatible format. |
---|
[4495] | 45 | !--------------------------------------------------------------------------------------------------! |
---|
| 46 | MODULE posix_interface |
---|
| 47 | |
---|
| 48 | USE ISO_C_BINDING |
---|
| 49 | |
---|
| 50 | USE kinds |
---|
| 51 | |
---|
| 52 | IMPLICIT NONE |
---|
| 53 | |
---|
| 54 | PRIVATE |
---|
| 55 | |
---|
| 56 | SAVE |
---|
| 57 | |
---|
| 58 | ! |
---|
| 59 | !-- Definitions copied from C include file fcntl.h |
---|
[4649] | 60 | INTEGER, PARAMETER :: o_creat = 64 !< 0100 octal |
---|
| 61 | INTEGER, PARAMETER :: o_rdonly = 0 !< |
---|
| 62 | INTEGER, PARAMETER :: o_rdwr = 2 !< |
---|
| 63 | INTEGER, PARAMETER :: o_wronly = 1 !< |
---|
| 64 | INTEGER, PARAMETER :: seek_set = 0 !< |
---|
[4495] | 65 | |
---|
| 66 | |
---|
| 67 | ! |
---|
| 68 | !-- Interfaces for POSIX calls |
---|
| 69 | INTERFACE |
---|
| 70 | INTEGER(C_INT) FUNCTION C_OPEN( pathname, flags, mode ) BIND( C, NAME = 'open' ) |
---|
| 71 | USE ISO_C_BINDING |
---|
| 72 | IMPLICIT NONE |
---|
[4649] | 73 | CHARACTER(KIND=C_CHAR), DIMENSION(128) :: pathname !< |
---|
| 74 | INTEGER(KIND=C_INT), VALUE :: flags !< |
---|
| 75 | INTEGER(KIND=C_INT), VALUE :: mode !< |
---|
[4495] | 76 | END FUNCTION C_OPEN |
---|
| 77 | END INTERFACE |
---|
| 78 | |
---|
| 79 | INTERFACE |
---|
| 80 | INTEGER(C_SIZE_T) FUNCTION C_LSEEK( fd, offset, whence ) BIND( C, NAME = 'lseek' ) |
---|
| 81 | USE ISO_C_BINDING |
---|
| 82 | IMPLICIT NONE |
---|
[4649] | 83 | INTEGER(KIND=C_INT), VALUE :: fd !< |
---|
| 84 | INTEGER(KIND=C_SIZE_T), VALUE :: offset !< |
---|
| 85 | INTEGER(KIND=C_INT), VALUE :: whence !< |
---|
[4495] | 86 | END FUNCTION C_LSEEK |
---|
| 87 | END INTERFACE |
---|
| 88 | |
---|
| 89 | ! |
---|
| 90 | !-- The read system call uses values of type off_t. There is no Fortran C_OFF_T, therefore C_SIZE_T |
---|
| 91 | !-- has been used here, assuming both are 8 byte integers. |
---|
| 92 | INTERFACE |
---|
| 93 | INTEGER(C_SIZE_T) FUNCTION C_READ( fd, buf, nr_byte ) BIND(C, NAME = 'read' ) |
---|
| 94 | USE ISO_C_BINDING |
---|
| 95 | IMPLICIT NONE |
---|
[4649] | 96 | INTEGER(KIND=C_INT), VALUE :: fd !< |
---|
| 97 | INTEGER(KIND=C_SIZE_T), VALUE :: nr_byte !< |
---|
| 98 | TYPE(C_PTR), VALUE :: buf !< |
---|
[4495] | 99 | END FUNCTION C_READ |
---|
| 100 | END INTERFACE |
---|
| 101 | |
---|
| 102 | INTERFACE |
---|
| 103 | INTEGER(C_SIZE_T) FUNCTION C_WRITE( fd, buf, nr_byte ) BIND( C, NAME = 'write' ) |
---|
| 104 | USE ISO_C_BINDING |
---|
| 105 | IMPLICIT NONE |
---|
[4649] | 106 | INTEGER(KIND=C_INT), VALUE :: fd !< |
---|
| 107 | INTEGER(KIND=C_SIZE_T), VALUE :: nr_byte !< |
---|
| 108 | TYPE(C_PTR), VALUE :: buf !< |
---|
[4495] | 109 | END FUNCTION C_WRITE |
---|
| 110 | END INTERFACE |
---|
| 111 | |
---|
| 112 | INTERFACE |
---|
| 113 | INTEGER(C_INT) FUNCTION C_CLOSE( fd ) BIND( C, NAME = 'close' ) |
---|
| 114 | USE ISO_C_BINDING |
---|
| 115 | IMPLICIT NONE |
---|
[4649] | 116 | INTEGER(KIND=C_INT), VALUE :: fd !< |
---|
[4495] | 117 | END FUNCTION C_CLOSE |
---|
| 118 | END INTERFACE |
---|
| 119 | |
---|
| 120 | ! |
---|
[4652] | 121 | !-- Sleep function from C library |
---|
| 122 | INTERFACE |
---|
| 123 | FUNCTION fsleep( seconds ) BIND( C, NAME = 'sleep' ) |
---|
| 124 | IMPORT |
---|
| 125 | INTEGER(C_INT) :: fsleep !< |
---|
| 126 | INTEGER(C_INT), INTENT(IN), VALUE :: seconds !< |
---|
| 127 | END FUNCTION fsleep |
---|
| 128 | END INTERFACE |
---|
| 129 | |
---|
| 130 | ! |
---|
[4495] | 131 | !-- PALM interfaces |
---|
[4652] | 132 | INTERFACE fortran_sleep |
---|
| 133 | MODULE PROCEDURE fortran_sleep |
---|
| 134 | END INTERFACE fortran_sleep |
---|
| 135 | |
---|
[4495] | 136 | INTERFACE posix_close |
---|
| 137 | MODULE PROCEDURE posix_close |
---|
| 138 | END INTERFACE posix_close |
---|
| 139 | |
---|
| 140 | INTERFACE posix_lseek |
---|
| 141 | MODULE PROCEDURE posix_lseek |
---|
| 142 | END INTERFACE posix_lseek |
---|
| 143 | |
---|
| 144 | INTERFACE posix_open |
---|
| 145 | MODULE PROCEDURE posix_open |
---|
| 146 | END INTERFACE posix_open |
---|
| 147 | |
---|
| 148 | INTERFACE posix_read |
---|
| 149 | MODULE PROCEDURE posix_read |
---|
| 150 | MODULE PROCEDURE posix_read_char_array |
---|
| 151 | MODULE PROCEDURE posix_read_int_1d |
---|
| 152 | MODULE PROCEDURE posix_read_int_2d |
---|
[4628] | 153 | MODULE PROCEDURE posix_read_i4_3d |
---|
| 154 | MODULE PROCEDURE posix_read_i8_3d |
---|
[4495] | 155 | MODULE PROCEDURE posix_read_offset_1d |
---|
| 156 | MODULE PROCEDURE posix_read_real_1d |
---|
| 157 | MODULE PROCEDURE posix_read_real_2d |
---|
| 158 | MODULE PROCEDURE posix_read_real_3d |
---|
| 159 | END INTERFACE posix_read |
---|
| 160 | |
---|
| 161 | INTERFACE posix_write |
---|
| 162 | MODULE PROCEDURE posix_write |
---|
| 163 | MODULE PROCEDURE posix_write_char_array |
---|
| 164 | MODULE PROCEDURE posix_write_int_1d |
---|
| 165 | MODULE PROCEDURE posix_write_int_2d |
---|
[4628] | 166 | MODULE PROCEDURE posix_write_i4_3d |
---|
| 167 | MODULE PROCEDURE posix_write_i8_3d |
---|
[4495] | 168 | MODULE PROCEDURE posix_write_offset_1d |
---|
| 169 | MODULE PROCEDURE posix_write_real_1d |
---|
| 170 | MODULE PROCEDURE posix_write_real_2d |
---|
| 171 | MODULE PROCEDURE posix_write_real_3d |
---|
| 172 | END INTERFACE posix_write |
---|
| 173 | |
---|
[4652] | 174 | PUBLIC fortran_sleep, & |
---|
| 175 | posix_close, & |
---|
[4649] | 176 | posix_lseek, & |
---|
| 177 | posix_open, & |
---|
| 178 | posix_read, & |
---|
| 179 | posix_write |
---|
[4495] | 180 | |
---|
| 181 | CONTAINS |
---|
| 182 | |
---|
[4652] | 183 | !--------------------------------------------------------------------------------------------------! |
---|
| 184 | ! Description: |
---|
| 185 | ! ------------ |
---|
| 186 | !> Wait a specified amount of seconds |
---|
| 187 | !--------------------------------------------------------------------------------------------------! |
---|
| 188 | SUBROUTINE fortran_sleep( seconds ) |
---|
| 189 | |
---|
| 190 | INTEGER, INTENT(IN) :: seconds !< seconds to wait |
---|
| 191 | |
---|
| 192 | INTEGER(C_INT) :: seconds_in_c !< same as seconds |
---|
| 193 | INTEGER(C_INT) :: sleep_return_value !< returned value to sleep |
---|
| 194 | |
---|
| 195 | seconds_in_c = seconds |
---|
| 196 | |
---|
| 197 | sleep_return_value = fsleep( seconds_in_c ) |
---|
| 198 | |
---|
| 199 | END SUBROUTINE fortran_sleep |
---|
| 200 | |
---|
| 201 | |
---|
[4495] | 202 | INTEGER FUNCTION posix_open( file_name, rd_flag ) |
---|
| 203 | |
---|
| 204 | IMPLICIT NONE |
---|
| 205 | |
---|
[4649] | 206 | CHARACTER(LEN=*), INTENT(IN) :: file_name !< |
---|
| 207 | CHARACTER(LEN=1), DIMENSION(:), POINTER :: f_string !< |
---|
| 208 | CHARACTER(LEN=128), TARGET :: lo_file_name !< |
---|
[4495] | 209 | |
---|
[4649] | 210 | INTEGER(C_INT) :: fd !< |
---|
| 211 | INTEGER(C_INT) :: flags !< |
---|
| 212 | INTEGER(C_INT) :: name_len !< |
---|
| 213 | INTEGER(C_INT) :: mode !< |
---|
| 214 | INTEGER, DIMENSION(1) :: bufshape !< |
---|
[4495] | 215 | |
---|
[4649] | 216 | LOGICAL, INTENT(IN) :: rd_flag !< |
---|
[4495] | 217 | |
---|
[4649] | 218 | TYPE(C_PTR) :: ptr !< |
---|
[4495] | 219 | |
---|
| 220 | |
---|
| 221 | ! |
---|
| 222 | !-- Note: There might be better solutions to convert FORTRAN string to C string but this works on |
---|
| 223 | !-- different FORTRAN compiler |
---|
| 224 | name_len = LEN( TRIM( file_name ) ) + 1 |
---|
[4649] | 225 | lo_file_name = TRIM( file_name ) // CHAR( 0 ) |
---|
[4495] | 226 | ptr = C_LOC( lo_file_name(1:1) ) |
---|
| 227 | bufshape(1) = name_len |
---|
| 228 | CALL C_F_POINTER( ptr, f_string, bufshape ) |
---|
| 229 | |
---|
| 230 | mode = 420 ! Mode 644 |
---|
| 231 | |
---|
| 232 | IF ( rd_flag ) THEN |
---|
[4649] | 233 | flags = o_rdonly |
---|
| 234 | fd = C_OPEN( f_string, flags, mode ) ! Open for reading |
---|
[4495] | 235 | ELSE |
---|
[4649] | 236 | flags = o_wronly + o_creat |
---|
| 237 | fd = C_OPEN( f_string, flags, mode ) ! Open for writing |
---|
[4495] | 238 | ENDIF |
---|
| 239 | |
---|
| 240 | posix_open = fd |
---|
| 241 | |
---|
| 242 | END FUNCTION posix_open |
---|
| 243 | |
---|
| 244 | |
---|
| 245 | |
---|
| 246 | SUBROUTINE posix_lseek( fid, offset ) |
---|
| 247 | |
---|
| 248 | IMPLICIT NONE |
---|
| 249 | |
---|
[4649] | 250 | INTEGER, INTENT(IN) :: fid !< |
---|
| 251 | INTEGER(KIND=C_INT) :: my_fid !< |
---|
| 252 | INTEGER(KIND=C_SIZE_T), INTENT(IN) :: offset !< |
---|
| 253 | INTEGER(KIND=C_SIZE_T) :: retval !< |
---|
| 254 | INTEGER(KIND=C_INT) :: whence !< |
---|
[4495] | 255 | |
---|
| 256 | |
---|
| 257 | my_fid = fid |
---|
[4649] | 258 | whence = seek_set |
---|
[4495] | 259 | |
---|
| 260 | retval = C_LSEEK( my_fid, offset, whence ) |
---|
| 261 | |
---|
| 262 | END SUBROUTINE posix_lseek |
---|
| 263 | |
---|
| 264 | |
---|
| 265 | |
---|
| 266 | SUBROUTINE posix_read_int_1d( fid, data, nw ) |
---|
| 267 | |
---|
| 268 | IMPLICIT NONE |
---|
| 269 | |
---|
[4649] | 270 | INTEGER :: nr_byte !< |
---|
| 271 | INTEGER, INTENT(IN) :: fid !< |
---|
| 272 | INTEGER, INTENT(IN) :: nw !< |
---|
| 273 | INTEGER(KIND=iwp), INTENT(IN), TARGET, DIMENSION(:) :: data !< |
---|
| 274 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 275 | |
---|
| 276 | |
---|
| 277 | nr_byte = nw*iwp |
---|
| 278 | buf = C_LOC( data ) |
---|
| 279 | |
---|
| 280 | CALL posix_read( fid, buf, nr_byte ) |
---|
| 281 | |
---|
| 282 | END SUBROUTINE posix_read_int_1d |
---|
| 283 | |
---|
| 284 | |
---|
| 285 | |
---|
[4628] | 286 | SUBROUTINE posix_read_int_2d( fid, data, nw ) |
---|
[4495] | 287 | |
---|
| 288 | IMPLICIT NONE |
---|
| 289 | |
---|
[4649] | 290 | INTEGER :: nr_byte !< |
---|
| 291 | INTEGER, INTENT(IN) :: fid !< |
---|
| 292 | INTEGER, INTENT(IN) :: nw !< |
---|
| 293 | INTEGER(KIND=iwp), INTENT(IN), TARGET, DIMENSION(:,:) :: data !< |
---|
| 294 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 295 | |
---|
| 296 | |
---|
| 297 | nr_byte = nw * iwp |
---|
| 298 | buf = C_LOC( data ) |
---|
| 299 | |
---|
| 300 | CALL posix_read( fid, buf, nr_byte ) |
---|
| 301 | |
---|
| 302 | END SUBROUTINE posix_read_int_2d |
---|
| 303 | |
---|
| 304 | |
---|
| 305 | |
---|
[4628] | 306 | SUBROUTINE posix_read_i4_3d( fid, data, nw ) |
---|
| 307 | |
---|
| 308 | IMPLICIT NONE |
---|
| 309 | |
---|
[4649] | 310 | INTEGER :: nr_byte !< |
---|
| 311 | INTEGER, INTENT(IN) :: fid !< |
---|
| 312 | INTEGER, INTENT(IN) :: nw !< |
---|
| 313 | INTEGER(KIND=isp), INTENT(IN), TARGET, DIMENSION(:,:,:) :: data !< |
---|
| 314 | TYPE(C_PTR) :: buf !< |
---|
[4628] | 315 | |
---|
| 316 | |
---|
| 317 | nr_byte = nw * isp |
---|
| 318 | buf = C_LOC( data ) |
---|
| 319 | |
---|
| 320 | CALL posix_read( fid, buf, nr_byte ) |
---|
| 321 | |
---|
| 322 | END SUBROUTINE posix_read_i4_3d |
---|
| 323 | |
---|
| 324 | |
---|
| 325 | |
---|
| 326 | SUBROUTINE posix_read_i8_3d( fid, data, nw ) |
---|
| 327 | |
---|
| 328 | IMPLICIT NONE |
---|
| 329 | |
---|
[4649] | 330 | INTEGER :: nr_byte !< |
---|
| 331 | INTEGER, INTENT(IN) :: fid !< |
---|
| 332 | INTEGER, INTENT(IN) :: nw !< |
---|
| 333 | INTEGER(KIND=idp), INTENT(IN), TARGET, DIMENSION(:,:,:) :: data !< |
---|
| 334 | TYPE(C_PTR) :: buf !< |
---|
[4628] | 335 | |
---|
| 336 | |
---|
| 337 | nr_byte = nw * idp |
---|
| 338 | buf = C_LOC( data ) |
---|
| 339 | |
---|
| 340 | CALL posix_read( fid, buf, nr_byte ) |
---|
| 341 | |
---|
| 342 | END SUBROUTINE posix_read_i8_3d |
---|
| 343 | |
---|
| 344 | |
---|
| 345 | |
---|
[4495] | 346 | SUBROUTINE posix_read_offset_1d( fid, data, nw ) |
---|
| 347 | |
---|
| 348 | IMPLICIT NONE |
---|
| 349 | |
---|
[4649] | 350 | INTEGER :: nr_byte !< |
---|
| 351 | INTEGER, INTENT(IN) :: fid !< |
---|
| 352 | INTEGER, INTENT(IN) :: nw !< |
---|
| 353 | INTEGER(KIND=C_SIZE_T), INTENT(IN), TARGET, DIMENSION(:) :: data !< |
---|
| 354 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 355 | |
---|
| 356 | |
---|
| 357 | nr_byte = nw * C_SIZE_T |
---|
| 358 | buf = C_LOC( data ) |
---|
| 359 | |
---|
| 360 | CALL posix_read( fid, buf, nr_byte ) |
---|
| 361 | |
---|
| 362 | END SUBROUTINE posix_read_offset_1d |
---|
| 363 | |
---|
| 364 | |
---|
| 365 | |
---|
| 366 | SUBROUTINE posix_read_real_1d( fid, data, nw ) |
---|
| 367 | |
---|
| 368 | IMPLICIT NONE |
---|
| 369 | |
---|
[4649] | 370 | INTEGER :: nr_byte !< |
---|
| 371 | INTEGER, INTENT(IN) :: fid !< |
---|
| 372 | INTEGER, INTENT(IN) :: nw !< |
---|
[4495] | 373 | |
---|
[4649] | 374 | REAL(KIND=wp), INTENT(IN), TARGET, DIMENSION(:) :: data !< |
---|
[4495] | 375 | |
---|
[4649] | 376 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 377 | |
---|
| 378 | |
---|
| 379 | nr_byte = nw * wp |
---|
| 380 | buf = C_LOC( data ) |
---|
| 381 | |
---|
| 382 | CALL posix_read( fid, buf, nr_byte ) |
---|
| 383 | |
---|
| 384 | END SUBROUTINE posix_read_real_1d |
---|
| 385 | |
---|
| 386 | |
---|
| 387 | |
---|
| 388 | SUBROUTINE posix_read_real_2d( fid, data, nw ) |
---|
| 389 | |
---|
| 390 | IMPLICIT NONE |
---|
| 391 | |
---|
[4649] | 392 | INTEGER :: nr_byte !< |
---|
| 393 | INTEGER, INTENT(IN) :: fid !< |
---|
| 394 | INTEGER, INTENT(IN) :: nw !< |
---|
[4495] | 395 | |
---|
[4649] | 396 | REAL(KIND=wp), INTENT(INOUT), TARGET, DIMENSION(:,:) :: data !< |
---|
[4495] | 397 | |
---|
[4649] | 398 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 399 | |
---|
| 400 | |
---|
| 401 | nr_byte = nw * wp |
---|
| 402 | buf = C_LOC( data ) |
---|
| 403 | |
---|
| 404 | CALL posix_read( fid, buf, nr_byte ) |
---|
| 405 | |
---|
| 406 | END SUBROUTINE posix_read_real_2d |
---|
| 407 | |
---|
| 408 | |
---|
| 409 | |
---|
| 410 | SUBROUTINE posix_read_real_3d( fid, data, nw ) |
---|
| 411 | |
---|
| 412 | IMPLICIT NONE |
---|
| 413 | |
---|
[4649] | 414 | INTEGER :: nr_byte !< |
---|
| 415 | INTEGER, INTENT(IN) :: fid !< |
---|
| 416 | INTEGER, INTENT(IN) :: nw !< |
---|
[4495] | 417 | |
---|
[4649] | 418 | REAL(KIND=wp), INTENT(INOUT), TARGET, DIMENSION(:,:,:) :: data !< |
---|
[4495] | 419 | |
---|
[4649] | 420 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 421 | |
---|
| 422 | |
---|
| 423 | nr_byte = nw * wp |
---|
| 424 | buf = C_LOC( data ) |
---|
| 425 | |
---|
| 426 | CALL posix_read( fid, buf, nr_byte ) |
---|
| 427 | |
---|
| 428 | END SUBROUTINE posix_read_real_3d |
---|
| 429 | |
---|
| 430 | |
---|
| 431 | |
---|
| 432 | SUBROUTINE posix_read( fid, buf, nb ) |
---|
| 433 | |
---|
| 434 | IMPLICIT NONE |
---|
| 435 | |
---|
[4649] | 436 | INTEGER, INTENT(IN) :: fid !< |
---|
| 437 | INTEGER , INTENT(IN) :: nb !< |
---|
| 438 | INTEGER(KIND=C_INT) :: my_fid !< |
---|
| 439 | INTEGER(KIND=C_SIZE_T) :: nr_byte !< |
---|
| 440 | INTEGER(KIND=C_SIZE_T) :: retval !< |
---|
[4495] | 441 | |
---|
[4649] | 442 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 443 | |
---|
| 444 | |
---|
| 445 | my_fid = fid |
---|
| 446 | nr_byte = nb |
---|
| 447 | |
---|
| 448 | retval = C_READ( my_fid, buf, nr_byte ) |
---|
| 449 | |
---|
| 450 | ! |
---|
[4649] | 451 | !-- The posix standard says that it is not guaranteed that all bytes are read in one read system |
---|
| 452 | !-- call. If retval is not equal to nr_byte, another system call has to be issued. |
---|
[4495] | 453 | !-- However, in all Unix distributions it is commonly accepted, that all bytes are read in one call |
---|
| 454 | !-- during during disk-IO. Therefore, here is only an error query and no reading in a while loop. |
---|
| 455 | IF ( retval /= nr_byte ) THEN |
---|
[4649] | 456 | WRITE( 6, * ) 'Number of bytes read does not match the number of requested bytes' |
---|
[4495] | 457 | CALL abort |
---|
| 458 | ENDIF |
---|
| 459 | |
---|
| 460 | END SUBROUTINE posix_read |
---|
| 461 | |
---|
| 462 | |
---|
| 463 | |
---|
| 464 | SUBROUTINE posix_read_char_array( fid, data ) |
---|
| 465 | |
---|
| 466 | IMPLICIT NONE |
---|
| 467 | |
---|
[4649] | 468 | CHARACTER(LEN=*), DIMENSION(:) :: data !< |
---|
| 469 | CHARACTER(LEN=LEN(data)), TARGET :: data_buf !< |
---|
[4495] | 470 | |
---|
[4649] | 471 | INTEGER :: i !< |
---|
| 472 | INTEGER, INTENT(IN) :: fid !< |
---|
| 473 | INTEGER(KIND=C_INT) :: my_fid !< |
---|
| 474 | INTEGER(KIND=C_SIZE_T) :: name_len !< |
---|
| 475 | INTEGER(KIND=C_SIZE_T) :: retval !< |
---|
[4495] | 476 | |
---|
[4649] | 477 | TYPE(C_PTR) :: ptr !< |
---|
[4495] | 478 | |
---|
| 479 | |
---|
| 480 | my_fid = fid |
---|
| 481 | |
---|
| 482 | DO i = 1, SIZE( data ) |
---|
| 483 | data_buf = data(i) |
---|
[4649] | 484 | name_len = LEN( data(i) ) |
---|
[4495] | 485 | ptr = C_LOC( data_buf(1:1) ) |
---|
| 486 | retval = C_READ( my_fid, ptr, name_len ) |
---|
| 487 | data(i) = data_buf |
---|
| 488 | ENDDO |
---|
| 489 | |
---|
| 490 | END SUBROUTINE posix_read_char_array |
---|
| 491 | |
---|
| 492 | |
---|
| 493 | |
---|
| 494 | SUBROUTINE posix_write_int_1d( fid, data, nw ) |
---|
| 495 | |
---|
| 496 | IMPLICIT NONE |
---|
| 497 | |
---|
[4649] | 498 | INTEGER, INTENT(IN) :: fid !< |
---|
| 499 | INTEGER ,INTENT(IN) :: nw !< |
---|
| 500 | INTEGER(KIND=C_INT) :: my_fid !< |
---|
| 501 | INTEGER(KIND=C_SIZE_T) :: nr_byte !< |
---|
| 502 | INTEGER(KIND=C_SIZE_T) :: retval !< |
---|
[4495] | 503 | |
---|
[4649] | 504 | INTEGER(KIND=iwp), INTENT(IN), TARGET, DIMENSION(:) :: data !< |
---|
[4495] | 505 | |
---|
[4649] | 506 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 507 | |
---|
| 508 | |
---|
| 509 | my_fid = fid |
---|
| 510 | nr_byte = nw * iwp |
---|
| 511 | buf = C_LOC( data ) |
---|
| 512 | |
---|
| 513 | retval = C_WRITE( my_fid, buf, nr_byte ) |
---|
| 514 | |
---|
| 515 | END SUBROUTINE posix_write_int_1d |
---|
| 516 | |
---|
| 517 | |
---|
| 518 | |
---|
| 519 | SUBROUTINE posix_write_int_2d( fid, data, nw ) |
---|
| 520 | |
---|
| 521 | IMPLICIT NONE |
---|
| 522 | |
---|
[4649] | 523 | INTEGER :: nr_byte !< |
---|
| 524 | INTEGER, INTENT(IN) :: fid !< |
---|
| 525 | INTEGER, INTENT(IN) :: nw !< |
---|
[4495] | 526 | |
---|
[4649] | 527 | INTEGER(KIND=iwp), INTENT(IN), TARGET, DIMENSION(:,:) :: data !< |
---|
[4495] | 528 | |
---|
[4649] | 529 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 530 | |
---|
| 531 | |
---|
| 532 | nr_byte = nw * iwp |
---|
| 533 | buf = C_LOC( data ) |
---|
| 534 | |
---|
| 535 | CALL posix_write( fid, buf, nr_byte ) |
---|
| 536 | |
---|
| 537 | END SUBROUTINE posix_write_int_2d |
---|
| 538 | |
---|
| 539 | |
---|
| 540 | |
---|
[4628] | 541 | SUBROUTINE posix_write_i4_3d( fid, data, nw ) |
---|
| 542 | |
---|
| 543 | IMPLICIT NONE |
---|
| 544 | |
---|
[4649] | 545 | INTEGER :: nr_byte !< |
---|
| 546 | INTEGER, INTENT(IN) :: fid !< |
---|
| 547 | INTEGER, INTENT(IN) :: nw !< |
---|
[4628] | 548 | |
---|
[4649] | 549 | INTEGER(KIND=isp), INTENT(IN), TARGET, DIMENSION(:,:,:) :: data !< |
---|
[4628] | 550 | |
---|
[4649] | 551 | TYPE(C_PTR) :: buf !< |
---|
[4628] | 552 | |
---|
| 553 | |
---|
| 554 | nr_byte = nw * isp |
---|
| 555 | buf = C_LOC( data ) |
---|
| 556 | |
---|
| 557 | CALL posix_write( fid, buf, nr_byte ) |
---|
| 558 | |
---|
| 559 | END SUBROUTINE posix_write_i4_3d |
---|
| 560 | |
---|
| 561 | |
---|
| 562 | |
---|
| 563 | SUBROUTINE posix_write_i8_3d( fid, data, nw ) |
---|
| 564 | |
---|
| 565 | IMPLICIT NONE |
---|
| 566 | |
---|
[4649] | 567 | INTEGER :: nr_byte !< |
---|
| 568 | INTEGER, INTENT(IN) :: fid !< |
---|
| 569 | INTEGER, INTENT(IN) :: nw !< |
---|
[4628] | 570 | |
---|
[4649] | 571 | INTEGER(KIND=idp), INTENT(IN), TARGET, DIMENSION(:,:,:) :: data !< |
---|
[4628] | 572 | |
---|
[4649] | 573 | TYPE(C_PTR) :: buf !< |
---|
[4628] | 574 | |
---|
| 575 | |
---|
| 576 | nr_byte = nw * idp |
---|
| 577 | buf = C_LOC( data ) |
---|
| 578 | |
---|
| 579 | CALL posix_write( fid, buf, nr_byte ) |
---|
| 580 | |
---|
| 581 | END SUBROUTINE posix_write_i8_3d |
---|
| 582 | |
---|
| 583 | |
---|
| 584 | |
---|
[4495] | 585 | SUBROUTINE posix_write_offset_1d( fid, data, nw ) |
---|
| 586 | |
---|
| 587 | IMPLICIT NONE |
---|
| 588 | |
---|
[4649] | 589 | INTEGER :: nr_byte !< |
---|
| 590 | INTEGER, INTENT(IN) :: fid !< |
---|
| 591 | INTEGER, INTENT(IN) :: nw !< |
---|
[4495] | 592 | |
---|
[4649] | 593 | INTEGER(KIND=C_SIZE_T), INTENT(IN), TARGET, DIMENSION(:) :: data !< |
---|
[4495] | 594 | |
---|
[4649] | 595 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 596 | |
---|
| 597 | |
---|
| 598 | nr_byte = nw * STORAGE_SIZE( data(1) ) / 8 |
---|
| 599 | buf = C_LOC( data ) |
---|
| 600 | |
---|
| 601 | CALL posix_write(fid, buf, nr_byte ) |
---|
| 602 | |
---|
| 603 | END SUBROUTINE posix_write_offset_1d |
---|
| 604 | |
---|
| 605 | |
---|
| 606 | |
---|
| 607 | SUBROUTINE posix_write_real_1d( fid, data, nw ) |
---|
| 608 | |
---|
| 609 | IMPLICIT NONE |
---|
| 610 | |
---|
[4649] | 611 | INTEGER :: nr_byte !< |
---|
| 612 | INTEGER, INTENT(IN) :: fid !< |
---|
| 613 | INTEGER, INTENT(IN) :: nw !< |
---|
[4495] | 614 | |
---|
[4649] | 615 | REAL(KIND=wp), INTENT(IN), TARGET, DIMENSION(:) :: data !< |
---|
[4495] | 616 | |
---|
[4649] | 617 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 618 | |
---|
| 619 | |
---|
| 620 | nr_byte = nw * wp |
---|
| 621 | buf = C_LOC( data ) |
---|
| 622 | |
---|
| 623 | CALL posix_write( fid, buf, nr_byte ) |
---|
| 624 | |
---|
| 625 | END SUBROUTINE posix_write_real_1d |
---|
| 626 | |
---|
| 627 | |
---|
| 628 | |
---|
| 629 | SUBROUTINE posix_write_real_2d( fid, data, nw ) |
---|
| 630 | |
---|
| 631 | IMPLICIT NONE |
---|
| 632 | |
---|
[4649] | 633 | INTEGER :: nr_byte !< |
---|
| 634 | INTEGER, INTENT(IN) :: fid !< |
---|
| 635 | INTEGER, INTENT(IN) :: nw !< |
---|
[4495] | 636 | |
---|
[4649] | 637 | REAL(KIND=wp), INTENT(INOUT), TARGET, DIMENSION(:,:) :: data !< |
---|
[4495] | 638 | |
---|
[4649] | 639 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 640 | |
---|
| 641 | |
---|
| 642 | nr_byte = nw * wp |
---|
| 643 | buf = C_LOC( data ) |
---|
| 644 | |
---|
| 645 | CALL posix_write( fid, buf, nr_byte ) |
---|
| 646 | |
---|
| 647 | END SUBROUTINE posix_write_real_2d |
---|
| 648 | |
---|
| 649 | |
---|
| 650 | |
---|
| 651 | SUBROUTINE posix_write_real_3d( fid, data, nw ) |
---|
| 652 | |
---|
| 653 | IMPLICIT NONE |
---|
| 654 | |
---|
[4649] | 655 | INTEGER :: nr_byte !< |
---|
| 656 | INTEGER, INTENT(IN) :: fid !< |
---|
| 657 | INTEGER, INTENT(IN) :: nw !< |
---|
[4495] | 658 | |
---|
[4649] | 659 | REAL(KIND=wp), INTENT(INOUT), TARGET, DIMENSION(:,:,:) :: data !< |
---|
[4495] | 660 | |
---|
[4649] | 661 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 662 | |
---|
| 663 | |
---|
| 664 | nr_byte = nw * wp |
---|
| 665 | buf = C_LOC( data ) |
---|
| 666 | |
---|
| 667 | CALL posix_write( fid, buf, nr_byte ) |
---|
| 668 | |
---|
| 669 | END SUBROUTINE posix_write_real_3d |
---|
| 670 | |
---|
| 671 | |
---|
| 672 | |
---|
| 673 | SUBROUTINE posix_write( fid, buf, nb ) |
---|
| 674 | |
---|
| 675 | IMPLICIT NONE |
---|
| 676 | |
---|
[4649] | 677 | INTEGER, INTENT(IN) :: fid !< |
---|
| 678 | INTEGER , INTENT(IN) :: nb !< |
---|
| 679 | INTEGER(KIND=C_INT) :: my_fid !< |
---|
| 680 | INTEGER(KIND=C_SIZE_T) :: nr_byte !< |
---|
| 681 | INTEGER(KIND=C_SIZE_T) :: retval !< |
---|
[4495] | 682 | |
---|
[4649] | 683 | TYPE(C_PTR) :: buf !< |
---|
[4495] | 684 | |
---|
| 685 | |
---|
| 686 | my_fid = fid |
---|
| 687 | nr_byte = nb |
---|
| 688 | |
---|
| 689 | retval = C_WRITE( my_fid, buf, nr_byte ) |
---|
| 690 | |
---|
| 691 | IF ( retval /= nr_byte ) THEN |
---|
[4649] | 692 | WRITE( 6, * ) 'Number of bytes to write does not match the number of requested bytes' |
---|
[4495] | 693 | CALL abort |
---|
| 694 | ENDIF |
---|
| 695 | |
---|
| 696 | END SUBROUTINE posix_write |
---|
| 697 | |
---|
| 698 | |
---|
| 699 | |
---|
| 700 | SUBROUTINE posix_write_char_array( fid, data ) |
---|
| 701 | |
---|
| 702 | IMPLICIT NONE |
---|
| 703 | |
---|
[4649] | 704 | CHARACTER(LEN=*), DIMENSION(:) :: data !< |
---|
| 705 | CHARACTER(LEN=LEN(data)+1), TARGET :: data_buf !< |
---|
[4495] | 706 | |
---|
[4649] | 707 | INTEGER :: i !< |
---|
| 708 | INTEGER, INTENT(IN) :: fid !< |
---|
| 709 | INTEGER(KIND=C_INT) :: my_fid !< |
---|
| 710 | INTEGER(KIND=C_SIZE_T) :: name_len !< |
---|
| 711 | INTEGER(KIND=C_SIZE_T) :: retval !< |
---|
[4495] | 712 | |
---|
[4649] | 713 | TYPE(C_PTR) :: ptr !< |
---|
[4495] | 714 | |
---|
| 715 | |
---|
| 716 | my_fid = fid |
---|
| 717 | |
---|
| 718 | DO i = 1, SIZE( data ) |
---|
| 719 | data_buf = data(i) // CHAR( 0 ) |
---|
| 720 | name_len = LEN( data(i) ) |
---|
| 721 | ptr = C_LOC( data_buf(1:1) ) |
---|
| 722 | retval = C_WRITE( my_fid, ptr, name_len ) |
---|
| 723 | ENDDO |
---|
| 724 | |
---|
| 725 | END SUBROUTINE posix_write_char_array |
---|
| 726 | |
---|
| 727 | |
---|
| 728 | |
---|
| 729 | SUBROUTINE posix_close( fid ) |
---|
| 730 | |
---|
| 731 | IMPLICIT NONE |
---|
| 732 | |
---|
[4649] | 733 | INTEGER, INTENT(IN) :: fid !< |
---|
| 734 | INTEGER(KIND=C_INT) :: my_fid !< |
---|
| 735 | INTEGER(KIND=C_INT) :: retval !< |
---|
[4495] | 736 | |
---|
| 737 | |
---|
| 738 | my_fid = fid |
---|
| 739 | |
---|
| 740 | retval = C_CLOSE( my_fid ) |
---|
| 741 | |
---|
| 742 | END SUBROUTINE posix_close |
---|
| 743 | |
---|
| 744 | |
---|
| 745 | END MODULE posix_interface |
---|