Home

Context Navigation

source: palm/trunk/SOURCE/pmc_parent_mod.f90 @ 4125

Last change on this file since 4125 was 3962, checked in by suehring, 6 years ago
Bugfixes in initial settings of child and parent communication patterns
Property svn:keywords set to `Id`
File size: 36.9 KB

Line
1	MODULE pmc_parent
2
3	!------------------------------------------------------------------------------!
4	! This file is part of the PALM model system.
5	!
6	! PALM is free software: you can redistribute it and/or modify it under the
7	! terms of the GNU General Public License as published by the Free Software
8	! Foundation, either version 3 of the License, or (at your option) any later
9	! version.
10	!
11	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
12	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
13	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
14	!
15	! You should have received a copy of the GNU General Public License along with
16	! PALM. If not, see <http://www.gnu.org/licenses/>.
17	!
18	! Copyright 1997-2019 Leibniz Universitaet Hannover
19	!------------------------------------------------------------------------------!
20	!
21	! Current revisions:
22	! ------------------
23	!
24	!
25	! Former revisions:
26	! -----------------
27	! $Id: pmc_parent_mod.f90 3962 2019-05-08 19:40:33Z suehring $
28	! Bugfixes in initial settings of child and parent communication patterns.
29	!
30	! 3655 2019-01-07 16:51:22Z knoop
31	! explicit kind settings
32	!
33	! 3241 2018-09-12 15:02:00Z raasch
34	! unused variables removed
35	!
36	! 3182 2018-07-27 13:36:03Z suehring
37	! Comment extended
38	!
39	! 2841 2018-02-27 15:02:57Z Giersch
40	! Bugfix: wrong placement of include 'mpif.h' corrected
41	!
42	! 2809 2018-02-15 09:55:58Z schwenkel
43	! Bugfix for gfortran: Replace the function C_SIZEOF with STORAGE_SIZE
44	!
45	! 2801 2018-02-14 16:01:55Z thiele
46	! Introduce particle transfer in nested models.
47	!
48	! 2718 2018-01-02 08:49:38Z maronga
49	! Corrected "Former revisions" section
50	!
51	! 2696 2017-12-14 17:12:51Z kanani
52	! Change in file header (GPL part)
53	!
54	! 2599 2017-11-01 13:18:45Z hellstea
55	! Some cleanup and commenting improvements only.
56	!
57	! 2101 2017-01-05 16:42:31Z suehring
58	!
59	! 2000 2016-08-20 18:09:15Z knoop
60	! Forced header and separation lines into 80 columns
61	!
62	! 1938 2016-06-13 15:26:05Z hellstea
63	! Minor clean up.
64	!
65	! 1901 2016-05-04 15:39:38Z raasch
66	! Module renamed. Code clean up. The words server/client changed to parent/child.
67	!
68	! 1900 2016-05-04 15:27:53Z raasch
69	! re-formatted to match PALM style
70	!
71	! 1850 2016-04-08 13:29:27Z maronga
72	! Module renamed
73	!
74	!
75	! 1833 2016-04-07 14:23:03Z raasch
76	! gfortran requires pointer attributes for some array declarations,
77	! long line wrapped
78	!
79	! 1808 2016-04-05 19:44:00Z raasch
80	! MPI module used by default on all machines
81	!
82	! 1797 2016-03-21 16:50:28Z raasch
83	! introduction of different datatransfer modes
84	!
85	! 1791 2016-03-11 10:41:25Z raasch
86	! Debug write-statements commented out
87	!
88	! 1786 2016-03-08 05:49:27Z raasch
89	! change in child-parent data transfer: parent now gets data from child
90	! instead that child put's it to the parent
91	!
92	! 1779 2016-03-03 08:01:28Z raasch
93	! kind=dp replaced by wp,
94	! error messages removed or changed to PALM style, dim_order removed
95	! array management changed from linked list to sequential loop
96	!
97	! 1766 2016-02-29 08:37:15Z raasch
98	! modifications to allow for using PALM's pointer version
99	! +new routine pmc_s_set_active_data_array
100	!
101	! 1764 2016-02-28 12:45:19Z raasch
102	! cpp-statement added (nesting can only be used in parallel mode)
103	!
104	! 1762 2016-02-25 12:31:13Z hellstea
105	! Initial revision by K. Ketelsen
106	!
107	! Description:
108	! ------------
109	!
110	! Parent part of Palm Model Coupler
111	!------------------------------------------------------------------------------!
112
113	#if defined( __parallel )
114	USE, INTRINSIC :: ISO_C_BINDING
115
116	#if !defined( __mpifh )
117	USE MPI
118	#endif
119	USE kinds
120	USE pmc_general, &
121	ONLY: arraydef, childdef, da_namedef, da_namelen, pedef, &
122	pmc_g_setname, pmc_max_array, pmc_max_models, pmc_sort
123
124	USE pmc_handle_communicator, &
125	ONLY: m_model_comm,m_model_rank,m_model_npes, m_to_child_comm, &
126	m_world_rank, pmc_parent_for_child
127
128	USE pmc_mpi_wrapper, &
129	ONLY: pmc_alloc_mem, pmc_bcast, pmc_time
130
131	IMPLICIT NONE
132
133	#if defined( __mpifh )
134	INCLUDE "mpif.h"
135	#endif
136
137	PRIVATE
138	SAVE
139
140	TYPE childindexdef
141	INTEGER :: nrpoints !<
142	INTEGER, DIMENSION(:,:), ALLOCATABLE :: index_list_2d !<
143	END TYPE childindexdef
144
145	TYPE(childdef), DIMENSION(pmc_max_models),PUBLIC :: children !<
146	TYPE(childindexdef), DIMENSION(pmc_max_models) :: indchildren !<
147
148	INTEGER :: next_array_in_list = 0 !<
149
150
151	PUBLIC pmc_parent_for_child
152
153
154	INTERFACE pmc_parentinit
155	MODULE PROCEDURE pmc_parentinit
156	END INTERFACE pmc_parentinit
157
158	INTERFACE pmc_s_set_2d_index_list
159	MODULE PROCEDURE pmc_s_set_2d_index_list
160	END INTERFACE pmc_s_set_2d_index_list
161
162	INTERFACE pmc_s_clear_next_array_list
163	MODULE PROCEDURE pmc_s_clear_next_array_list
164	END INTERFACE pmc_s_clear_next_array_list
165
166	INTERFACE pmc_s_getnextarray
167	MODULE PROCEDURE pmc_s_getnextarray
168	END INTERFACE pmc_s_getnextarray
169
170	INTERFACE pmc_s_set_dataarray
171	MODULE PROCEDURE pmc_s_set_dataarray_2d
172	MODULE PROCEDURE pmc_s_set_dataarray_3d
173	MODULE PROCEDURE pmc_s_set_dataarray_ip2d
174	END INTERFACE pmc_s_set_dataarray
175
176	INTERFACE pmc_s_setind_and_allocmem
177	MODULE PROCEDURE pmc_s_setind_and_allocmem
178	END INTERFACE pmc_s_setind_and_allocmem
179
180	INTERFACE pmc_s_fillbuffer
181	MODULE PROCEDURE pmc_s_fillbuffer
182	END INTERFACE pmc_s_fillbuffer
183
184	INTERFACE pmc_s_getdata_from_buffer
185	MODULE PROCEDURE pmc_s_getdata_from_buffer
186	END INTERFACE pmc_s_getdata_from_buffer
187
188	INTERFACE pmc_s_set_active_data_array
189	MODULE PROCEDURE pmc_s_set_active_data_array
190	END INTERFACE pmc_s_set_active_data_array
191
192	INTERFACE pmc_s_get_child_npes
193	MODULE PROCEDURE pmc_s_get_child_npes
194	END INTERFACE pmc_s_get_child_npes
195
196	PUBLIC pmc_parentinit, pmc_s_clear_next_array_list, pmc_s_fillbuffer, &
197	pmc_s_getdata_from_buffer, pmc_s_getnextarray, &
198	pmc_s_setind_and_allocmem, pmc_s_set_active_data_array, &
199	pmc_s_set_dataarray, pmc_s_set_2d_index_list, &
200	pmc_s_get_child_npes
201
202	CONTAINS
203
204
205	SUBROUTINE pmc_parentinit
206
207	IMPLICIT NONE
208
209	INTEGER(iwp) :: childid !<
210	INTEGER(iwp) :: i !<
211	INTEGER(iwp) :: j !<
212	INTEGER(iwp) :: istat !<
213
214	DO i = 1, SIZE( pmc_parent_for_child )-1
215
216	childid = pmc_parent_for_child( i )
217
218	children(childid)%model_comm = m_model_comm
219	children(childid)%inter_comm = m_to_child_comm(childid)
220
221	!
222	!-- Get rank and size
223	CALL MPI_COMM_RANK( children(childid)%model_comm, &
224	children(childid)%model_rank, istat )
225	CALL MPI_COMM_SIZE( children(childid)%model_comm, &
226	children(childid)%model_npes, istat )
227	CALL MPI_COMM_REMOTE_SIZE( children(childid)%inter_comm, &
228	children(childid)%inter_npes, istat )
229	!
230	!-- Intra communicator is used for MPI_GET
231	CALL MPI_INTERCOMM_MERGE( children(childid)%inter_comm, .FALSE., &
232	children(childid)%intra_comm, istat )
233	CALL MPI_COMM_RANK( children(childid)%intra_comm, &
234	children(childid)%intra_rank, istat )
235
236	ALLOCATE( children(childid)%pes(children(childid)%inter_npes))
237	!
238	!-- Allocate array of TYPE arraydef for all child PEs to store information
239	!-- of the transfer array
240	DO j = 1, children(childid)%inter_npes
241	ALLOCATE( children(childid)%pes(j)%array_list(pmc_max_array) )
242	ENDDO
243
244	CALL get_da_names_from_child (childid)
245
246	ENDDO
247
248	END SUBROUTINE pmc_parentinit
249
250
251
252	SUBROUTINE pmc_s_set_2d_index_list( childid, index_list )
253
254	IMPLICIT NONE
255
256	INTEGER(iwp), INTENT(IN) :: childid !<
257	INTEGER(iwp), DIMENSION(:,:), INTENT(INOUT) :: index_list !<
258
259	INTEGER(iwp) :: ian !<
260	INTEGER(iwp) :: ie !<
261	INTEGER(iwp) :: ip !<
262	INTEGER(iwp) :: is !<
263	INTEGER(iwp) :: istat !<
264
265
266	IF ( m_model_rank == 0 ) THEN
267	!
268	!-- Sort to ascending parent process order
269	CALL pmc_sort( index_list, 6 )
270	is = 1
271	DO ip = 0, m_model_npes-1
272	!
273	!-- Split into parent processes
274	ie = is - 1
275	!
276	!-- There may be no entry for this process
277	IF ( is <= SIZE( index_list,2 ) .AND. ie >= 0 ) THEN
278	DO WHILE ( index_list(6,ie+1 ) == ip )
279	ie = ie + 1
280	IF ( ie == SIZE( index_list,2 ) ) EXIT
281	ENDDO
282	ian = ie - is + 1
283	ELSE
284	is = -1
285	ie = -2
286	ian = 0
287	ENDIF
288	!
289	!-- Send data to other parent processes
290	IF ( ip == 0 ) THEN
291	indchildren(childid)%nrpoints = ian
292	IF ( ian > 0) THEN
293	ALLOCATE( indchildren(childid)%index_list_2d(6,ian) )
294	indchildren(childid)%index_list_2d(:,1:ian) = &
295	index_list(:,is:ie)
296	ENDIF
297	ELSE
298	CALL MPI_SEND( ian, 1, MPI_INTEGER, ip, 1000, m_model_comm, &
299	istat )
300	IF ( ian > 0) THEN
301	CALL MPI_SEND( index_list(1,is), 6*ian, MPI_INTEGER, ip, &
302	1001, m_model_comm, istat )
303	ENDIF
304	ENDIF
305	is = ie + 1
306	ENDDO
307	ELSE
308	CALL MPI_RECV( indchildren(childid)%nrpoints, 1, MPI_INTEGER, 0, 1000, &
309	m_model_comm, MPI_STATUS_IGNORE, istat )
310	ian = indchildren(childid)%nrpoints
311	IF ( ian > 0 ) THEN
312	ALLOCATE( indchildren(childid)%index_list_2d(6,ian) )
313	CALL MPI_RECV( indchildren(childid)%index_list_2d, 6*ian, &
314	MPI_INTEGER, 0, 1001, m_model_comm, &
315	MPI_STATUS_IGNORE, istat)
316	ENDIF
317	ENDIF
318	CALL set_pe_index_list( children(childid), &
319	indchildren(childid)%index_list_2d, &
320	indchildren(childid)%nrpoints )
321
322	END SUBROUTINE pmc_s_set_2d_index_list
323
324
325
326	SUBROUTINE pmc_s_clear_next_array_list
327
328	IMPLICIT NONE
329
330	next_array_in_list = 0
331
332	END SUBROUTINE pmc_s_clear_next_array_list
333
334
335
336	LOGICAL FUNCTION pmc_s_getnextarray( childid, myname )
337
338	!
339	!-- Althoug there are no linked lists any more in PMC, this call still looks like working with a list
340
341	CHARACTER(LEN=*), INTENT(OUT) :: myname !<
342	INTEGER(iwp), INTENT(IN) :: childid !<
343
344	TYPE(arraydef), POINTER :: ar
345	TYPE(pedef), POINTER :: ape
346
347	next_array_in_list = next_array_in_list + 1
348	!
349	!-- Array names are the same on all children processes, so take first
350	!-- process to get the name
351	ape => children(childid)%pes(1)
352
353	IF ( next_array_in_list > ape%nr_arrays ) THEN
354	!
355	!-- All arrays are done
356	pmc_s_getnextarray = .FALSE.
357	RETURN
358	ENDIF
359
360	ar => ape%array_list(next_array_in_list)
361	myname = ar%name
362	!
363	!-- Return true if there is still an array in the list
364
365	pmc_s_getnextarray = .TRUE.
366
367	END FUNCTION pmc_s_getnextarray
368
369
370
371	SUBROUTINE pmc_s_set_dataarray_2d( childid, array, array_2 )
372
373	IMPLICIT NONE
374
375	INTEGER(iwp), INTENT(IN) :: childid !<
376
377	REAL(wp), INTENT(IN), DIMENSION(:,:), POINTER :: array !<
378	REAL(wp), INTENT(IN), DIMENSION(:,:), POINTER, OPTIONAL :: array_2 !<
379
380	INTEGER(iwp) :: nrdims !<
381	INTEGER(iwp), DIMENSION(4) :: dims !<
382	TYPE(C_PTR) :: array_adr !<
383	TYPE(C_PTR) :: second_adr !<
384
385
386	dims = 1
387	nrdims = 2
388	dims(1) = SIZE( array,1 )
389	dims(2) = SIZE( array,2 )
390	array_adr = C_LOC( array )
391
392	IF ( PRESENT( array_2 ) ) THEN
393	second_adr = C_LOC(array_2)
394	CALL pmc_s_setarray( childid, nrdims, dims, array_adr, &
395	second_adr = second_adr)
396	ELSE
397	CALL pmc_s_setarray( childid, nrdims, dims, array_adr )
398	ENDIF
399
400	END SUBROUTINE pmc_s_set_dataarray_2d
401
402	SUBROUTINE pmc_s_set_dataarray_ip2d( childid, array )
403
404	IMPLICIT NONE
405
406	INTEGER(iwp),INTENT(IN) :: childid !<
407
408	INTEGER(idp), INTENT(IN), DIMENSION(:,:), POINTER :: array !<
409
410	INTEGER(iwp) :: nrdims !<
411	INTEGER(iwp), DIMENSION(4) :: dims !<
412	TYPE(C_PTR) :: array_adr !<
413
414
415	dims = 1
416	nrdims = 2
417	dims(1) = SIZE( array,1 )
418	dims(2) = SIZE( array,2 )
419	array_adr = C_LOC( array )
420
421	CALL pmc_s_setarray( childid, nrdims, dims, array_adr , dimkey=22)
422
423	END SUBROUTINE pmc_s_set_dataarray_ip2d
424
425
426	SUBROUTINE pmc_s_set_dataarray_3d( childid, array, nz_cl, nz, array_2 )
427
428	IMPLICIT NONE
429
430	INTEGER(iwp), INTENT(IN) :: childid !<
431	INTEGER(iwp), INTENT(IN) :: nz !<
432	INTEGER(iwp), INTENT(IN) :: nz_cl !<
433
434	REAL(wp), INTENT(IN), DIMENSION(:,:,:), POINTER :: array !<
435	REAL(wp), INTENT(IN), DIMENSION(:,:,:), POINTER, OPTIONAL :: array_2 !<
436
437	INTEGER(iwp) :: nrdims !<
438	INTEGER(iwp), DIMENSION(4) :: dims !<
439	TYPE(C_PTR) :: array_adr !<
440	TYPE(C_PTR) :: second_adr !<
441
442	nrdims = 3
443	dims(1) = SIZE( array,1 )
444	dims(2) = SIZE( array,2 )
445	dims(3) = SIZE( array,3 )
446	dims(4) = nz_cl+dims(1)-nz ! works for first dimension 1:nz and 0:nz+1
447
448	array_adr = C_LOC(array)
449	!
450	!-- In PALM's pointer version, two indices have to be stored internally.
451	!-- The active address of the data array is set in swap_timelevel.
452	IF ( PRESENT( array_2 ) ) THEN
453	second_adr = C_LOC( array_2 )
454	CALL pmc_s_setarray( childid, nrdims, dims, array_adr, &
455	second_adr = second_adr)
456	ELSE
457	CALL pmc_s_setarray( childid, nrdims, dims, array_adr )
458	ENDIF
459
460	END SUBROUTINE pmc_s_set_dataarray_3d
461
462
463
464	SUBROUTINE pmc_s_setind_and_allocmem( childid )
465
466	USE control_parameters, &
467	ONLY: message_string
468
469	IMPLICIT NONE
470
471	!
472	!-- Naming convention for appendices: _pc -> parent to child transfer
473	!-- _cp -> child to parent transfer
474	!-- send -> parent to child transfer
475	!-- recv -> child to parent transfer
476	INTEGER(iwp), INTENT(IN) :: childid !<
477
478	INTEGER(iwp) :: arlen !<
479	INTEGER(iwp) :: i !<
480	INTEGER(iwp) :: ierr !<
481	INTEGER(iwp) :: j !<
482	INTEGER(iwp) :: lo_nr_arrays !< store number of arrays in local variiab le
483	INTEGER(iwp) :: myindex !<
484	INTEGER(iwp) :: total_npes !< Total Number of PEs Parent and Child
485
486	INTEGER(idp) :: bufsize !< size of MPI data window
487	INTEGER(KIND=MPI_ADDRESS_KIND) :: winsize !<
488
489	INTEGER(iwp), DIMENSION(:,:), ALLOCATABLE :: myindex_s
490	INTEGER(iwp), DIMENSION(:,:), ALLOCATABLE :: myindex_r
491
492	TYPE(C_PTR) :: base_ptr !<
493	TYPE(pedef), POINTER :: ape !<
494	TYPE(arraydef), POINTER :: ar !<
495
496	REAL(wp),DIMENSION(:), POINTER, SAVE :: base_array_pc !< base array for parent to child transfer
497	REAL(wp),DIMENSION(:), POINTER, SAVE :: base_array_cp !< base array for child to parent transfer
498
499	call MPI_COMM_SIZE (children(childid)%intra_comm, total_npes, ierr)
500	!
501	!-- Parent to child direction
502	myindex = 1
503	bufsize = 8
504	!
505	!-- All Child processes get the same number of arrays
506	!-- Therfore the number of arrays form the first Child process can be used for Dimension.
507	lo_nr_arrays = children(childid)%pes(1)%nr_arrays
508
509	ALLOCATE( myindex_s(lo_nr_arrays,0:total_npes-1) )
510	ALLOCATE( myindex_r(lo_nr_arrays,0:total_npes-1) )
511
512	myindex_s = 0
513
514	!
515	!-- First stride: compute size and set index
516	DO i = 1, children(childid)%inter_npes
517
518	ape => children(childid)%pes(i)
519
520	DO j = 1, ape%nr_arrays
521
522	ar => ape%array_list(j)
523	IF ( ar%nrdims == 2 ) THEN
524	arlen = ape%nrele
525	ELSEIF ( ar%nrdims == 3 ) THEN
526	arlen = ape%nrele * ar%a_dim(4)
527	ELSE
528	arlen = -1
529	ENDIF
530	ar%sendindex = myindex
531	!
532	! Using intra communicator for MPU_Alltoall, the numbers of the child processes are after the paremt ones
533
534	myindex_s(j,i-1+children(childid)%model_npes) = myindex
535
536	myindex = myindex + arlen
537	bufsize = bufsize + arlen
538	ar%sendsize = arlen
539	ENDDO
540
541	ENDDO
542	!
543	!-- Using MPI_Alltoall to send indices from Parent to Child
544	!-- The data comming back from the child processes are ignored.
545
546	CALL MPI_ALLTOALL( myindex_s, lo_nr_arrays, MPI_INTEGER, &
547	myindex_r, lo_nr_arrays, MPI_INTEGER, &
548	children(childid)%intra_comm, ierr )
549
550	!
551	!-- Using MPI_Alltoall to receive indices from Child
552	myindex_s = 0
553	myindex_r = 0
554
555	CALL MPI_ALLTOALL( myindex_s, lo_nr_arrays, MPI_INTEGER, &
556	myindex_r, lo_nr_arrays, MPI_INTEGER, &
557	children(childid)%intra_comm, ierr )
558	!
559	!-- Create RMA (One Sided Communication) window for data buffer parent to
560	!-- child transfer.
561	!-- The buffer of MPI_GET (counterpart of transfer) can be PE-local, i.e.
562	!-- it can but must not be part of the MPI RMA window. Only one RMA window is
563	!-- required to prepare the data for
564	!-- parent -> child transfer on the parent side
565	!-- and for
566	!-- child -> parent transfer on the child side
567	CALL pmc_alloc_mem( base_array_pc, bufsize )
568	children(childid)%totalbuffersize = bufsize * wp
569
570	winsize = bufsize * wp
571	CALL MPI_WIN_CREATE( base_array_pc, winsize, wp, MPI_INFO_NULL, &
572	children(childid)%intra_comm, &
573	children(childid)%win_parent_child, ierr )
574	!
575	!-- Open window to set data
576	CALL MPI_WIN_FENCE( 0, children(childid)%win_parent_child, ierr )
577	!
578	!-- Second stride: set buffer pointer
579	DO i = 1, children(childid)%inter_npes
580
581	ape => children(childid)%pes(i)
582
583	DO j = 1, ape%nr_arrays
584
585	ar => ape%array_list(j)
586	ar%sendbuf = C_LOC( base_array_pc(ar%sendindex) )
587
588	IF ( ar%sendindex + ar%sendsize > bufsize ) THEN
589	WRITE( message_string, '(a,i4,4i7,1x,a)' ) &
590	'parent buffer too small ',i, &
591	ar%sendindex,ar%sendsize,ar%sendindex+ar%sendsize, &
592	bufsize,trim(ar%name)
593	CALL message( 'pmc_s_setind_and_allocmem', 'PA0429', 3, 2, 0, 6, 0 )
594	ENDIF
595	ENDDO
596	ENDDO
597	!
598	!-- Child to parent direction
599	bufsize = 8
600	!
601	!-- First stride: compute size and set index
602	DO i = 1, children(childid)%inter_npes
603	ape => children(childid)%pes(i)
604	DO j = 1, ape%nr_arrays
605	ar => ape%array_list(j)
606	!
607	!-- Receive index from child
608	IF ( ar%nrdims == 3 ) THEN
609	bufsize = MAX( bufsize, &
610	INT( ape%nrele * ar%a_dim(4), MPI_ADDRESS_KIND ) )
611	ELSE
612	bufsize = MAX( bufsize, INT( ape%nrele, MPI_ADDRESS_KIND ) )
613	ENDIF
614	ar%recvindex = myindex_r(j,i-1+children(childid)%model_npes)
615	ENDDO
616	ENDDO
617
618	DEALLOCATE( myindex_s )
619	DEALLOCATE( myindex_r )
620
621	!
622	!-- Create RMA (one sided communication, RMA = Remote Memory Access) data buffer.
623	!-- The buffer for MPI_GET can be PE local, i.e. it can but must not be part of
624	!-- the MPI RMA window
625	CALL pmc_alloc_mem( base_array_cp, bufsize, base_ptr )
626	children(childid)%totalbuffersize = bufsize * wp
627
628	CALL MPI_BARRIER( children(childid)%intra_comm, ierr )
629	!
630	!-- Second stride: set buffer pointer
631	DO i = 1, children(childid)%inter_npes
632	ape => children(childid)%pes(i)
633	DO j = 1, ape%nr_arrays
634	ar => ape%array_list(j)
635	ar%recvbuf = base_ptr
636	ENDDO
637	ENDDO
638
639	END SUBROUTINE pmc_s_setind_and_allocmem
640
641
642
643	SUBROUTINE pmc_s_fillbuffer( childid, waittime, particle_transfer )
644
645	IMPLICIT NONE
646
647	INTEGER(iwp), INTENT(IN) :: childid !<
648
649	REAL(wp), INTENT(OUT), OPTIONAL :: waittime !<
650	LOGICAL, INTENT(IN), OPTIONAL :: particle_transfer !<
651
652
653	INTEGER(iwp) :: ierr !<
654	INTEGER(iwp) :: ij !<
655	INTEGER(iwp) :: ip !<
656	INTEGER(iwp) :: j !<
657	INTEGER(iwp) :: myindex !<
658
659	LOGICAL :: lo_ptrans
660
661	INTEGER(iwp), DIMENSION(1) :: buf_shape
662
663	REAL(wp) :: t1 !<
664	REAL(wp) :: t2 !<
665	REAL(wp), POINTER, DIMENSION(:) :: buf !<
666	REAL(wp), POINTER, DIMENSION(:,:) :: data_2d !<
667	REAL(wp), POINTER, DIMENSION(:,:,:) :: data_3d !<
668	INTEGER(idp), POINTER, DIMENSION(:) :: ibuf !<
669	INTEGER(idp), POINTER, DIMENSION(:,:) :: idata_2d !<
670
671	TYPE(pedef), POINTER :: ape !<
672	TYPE(arraydef), POINTER :: ar !<
673
674	!
675	!-- Synchronization of the model is done in pmci_synchronize.
676	!-- Therefor the RMA window can be filled without
677	!-- sychronization at this point and a barrier is not necessary.
678	!-- Please note that waittime has to be set in pmc_s_fillbuffer AND
679	!-- pmc_c_getbuffer
680	IF ( PRESENT( waittime) ) THEN
681	t1 = pmc_time()
682	CALL MPI_BARRIER( children(childid)%intra_comm, ierr )
683	t2 = pmc_time()
684	waittime = t2- t1
685	ENDIF
686
687	lo_ptrans = .FALSE.
688	IF ( PRESENT( particle_transfer)) lo_ptrans = particle_transfer
689
690	DO ip = 1, children(childid)%inter_npes
691	ape => children(childid)%pes(ip)
692	DO j = 1, ape%nr_arrays
693	ar => ape%array_list(j)
694	myindex = 1
695
696	IF ( ar%dimkey == 2 .AND. .NOT.lo_ptrans ) THEN ! PALM 2D REAL*8 Array
697
698	buf_shape(1) = ape%nrele
699	CALL C_F_POINTER( ar%sendbuf, buf, buf_shape )
700	CALL C_F_POINTER( ar%data, data_2d, ar%a_dim(1:2) )
701	DO ij = 1, ape%nrele
702	buf(myindex) = data_2d(ape%locind(ij)%j,ape%locind(ij)%i)
703	myindex = myindex + 1
704	ENDDO
705
706	ELSEIF ( ar%dimkey == 3 .AND. .NOT.lo_ptrans ) THEN ! PALM 3D REAL*8 Array
707
708	buf_shape(1) = ape%nrele*ar%a_dim(4)
709	CALL C_F_POINTER( ar%sendbuf, buf, buf_shape )
710	CALL C_F_POINTER( ar%data, data_3d, ar%a_dim(1:3) )
711	DO ij = 1, ape%nrele
712	buf(myindex:myindex+ar%a_dim(4)-1) = &
713	data_3d(1:ar%a_dim(4),ape%locind(ij)%j,ape%locind(ij)%i)
714	myindex = myindex + ar%a_dim(4)
715	ENDDO
716	ELSEIF ( ar%dimkey == 22 .AND. lo_ptrans ) THEN ! 2D INTEGER*8 Array for particle Transfer
717
718	buf_shape(1) = ape%nrele
719	CALL C_F_POINTER( ar%sendbuf, ibuf, buf_shape )
720	CALL C_F_POINTER( ar%data, idata_2d, ar%a_dim(1:2) )
721	DO ij = 1, ape%nrele
722	ibuf(myindex) = idata_2d(ape%locind(ij)%j,ape%locind(ij)%i)
723	myindex = myindex + 1
724	ENDDO
725	ENDIF
726	ENDDO
727	ENDDO
728	!
729	!-- Buffer is filled
730	CALL MPI_BARRIER( children(childid)%intra_comm, ierr )
731
732	END SUBROUTINE pmc_s_fillbuffer
733
734
735
736	SUBROUTINE pmc_s_getdata_from_buffer( childid, waittime , particle_transfer, child_process_nr )
737
738	IMPLICIT NONE
739
740	INTEGER(iwp), INTENT(IN) :: childid !<
741	REAL(wp), INTENT(OUT), OPTIONAL :: waittime !<
742	LOGICAL, INTENT(IN), OPTIONAL :: particle_transfer !<
743	INTEGER(iwp), INTENT(IN), OPTIONAL :: child_process_nr !<
744
745	INTEGER(iwp) :: ierr !<
746	INTEGER(iwp) :: ij !<
747	INTEGER(iwp) :: ip !<
748	INTEGER(iwp) :: ip_start !<
749	INTEGER(iwp) :: ip_end !<
750	INTEGER(iwp) :: j !<
751	INTEGER(iwp) :: myindex !<
752	INTEGER(iwp) :: nr !<
753	INTEGER(iwp) :: target_pe !<
754	INTEGER(KIND=MPI_ADDRESS_KIND) :: target_disp !<
755
756	LOGICAL :: lo_ptrans
757
758	INTEGER(iwp), DIMENSION(1) :: buf_shape !<
759
760	REAL(wp) :: t1 !<
761	REAL(wp) :: t2 !<
762	REAL(wp), POINTER, DIMENSION(:) :: buf !<
763	REAL(wp), POINTER, DIMENSION(:,:) :: data_2d !<
764	REAL(wp), POINTER, DIMENSION(:,:,:) :: data_3d !<
765	INTEGER(idp), POINTER, DIMENSION(:) :: ibuf !<
766	INTEGER(idp), POINTER, DIMENSION(:,:) :: idata_2d !<
767
768	TYPE(pedef), POINTER :: ape !<
769	TYPE(arraydef), POINTER :: ar !<
770
771
772	t1 = pmc_time()
773
774	IF(PRESENT(child_process_nr)) then
775	ip_start = child_process_nr
776	ip_end = child_process_nr
777	ELSE
778	ip_start = 1
779	ip_end = children(childid)%inter_npes
780	END IF
781
782	lo_ptrans = .FALSE.
783	IF ( PRESENT( particle_transfer)) lo_ptrans = particle_transfer
784
785	IF(ip_start == 1) THEN
786	!
787	!-- Wait for child to fill buffer
788	CALL MPI_BARRIER( children(childid)%intra_comm, ierr )
789	t2 = pmc_time() - t1
790	IF ( PRESENT( waittime ) ) waittime = t2
791
792	CALL MPI_BARRIER( children(childid)%intra_comm, ierr )
793	ENDIF
794
795	DO ip = ip_start,ip_end
796	ape => children(childid)%pes(ip)
797	DO j = 1, ape%nr_arrays
798	ar => ape%array_list(j)
799
800	IF ( ar%recvindex < 0 ) CYCLE
801
802	IF ( ar%dimkey == 2 .AND. .NOT.lo_ptrans ) THEN
803	nr = ape%nrele
804	ELSEIF ( ar%dimkey == 3 .AND. .NOT.lo_ptrans ) THEN
805	nr = ape%nrele * ar%a_dim(4)
806	ELSE IF ( ar%dimkey == 22 .AND. lo_ptrans) THEN
807	nr = ape%nrele
808	ELSE
809	CYCLE !particle array are not transfered here
810	ENDIF
811	buf_shape(1) = nr
812	IF(lo_ptrans) THEN
813	CALL C_F_POINTER( ar%recvbuf, ibuf, buf_shape )
814	ELSE
815	CALL C_F_POINTER( ar%recvbuf, buf, buf_shape )
816	ENDIF
817
818	!
819	!-- MPI passive target RMA
820	IF ( nr > 0 ) THEN
821	target_disp = ar%recvindex - 1
822	!
823	!-- Child processes are located behind parent process
824	target_pe = ip - 1 + m_model_npes
825	CALL MPI_WIN_LOCK( MPI_LOCK_SHARED, target_pe, 0, &
826	children(childid)%win_parent_child, ierr )
827	IF(lo_ptrans) THEN
828	CALL MPI_GET( ibuf, nr8, MPI_BYTE, target_pe, target_disp, nr8, & !There is no MPI_INTEGER8 datatype
829	MPI_BYTE, children(childid)%win_parent_child, ierr )
830	ELSE
831	CALL MPI_GET( buf, nr, MPI_REAL, target_pe, target_disp, nr, &
832	MPI_REAL, children(childid)%win_parent_child, ierr )
833	ENDIF
834	CALL MPI_WIN_UNLOCK( target_pe, &
835	children(childid)%win_parent_child, ierr )
836	ENDIF
837	myindex = 1
838	IF ( ar%dimkey == 2 .AND. .NOT.lo_ptrans ) THEN
839
840	CALL C_F_POINTER( ar%data, data_2d, ar%a_dim(1:2) )
841	DO ij = 1, ape%nrele
842	data_2d(ape%locind(ij)%j,ape%locind(ij)%i) = buf(myindex)
843	myindex = myindex + 1
844	ENDDO
845
846	ELSEIF ( ar%dimkey == 3 .AND. .NOT.lo_ptrans ) THEN
847
848	CALL C_F_POINTER( ar%data, data_3d, ar%a_dim(1:3))
849	DO ij = 1, ape%nrele
850	data_3d(1:ar%a_dim(4),ape%locind(ij)%j,ape%locind(ij)%i) = &
851	buf(myindex:myindex+ar%a_dim(4)-1)
852	myindex = myindex + ar%a_dim(4)
853	ENDDO
854
855	ELSE IF ( ar%dimkey == 22 .AND. lo_ptrans) THEN
856
857	CALL C_F_POINTER( ar%data, idata_2d, ar%a_dim(1:2) )
858	DO ij = 1, ape%nrele
859	idata_2d(ape%locind(ij)%j,ape%locind(ij)%i) = ibuf(myindex)
860	myindex = myindex + 1
861	ENDDO
862
863	ENDIF
864	ENDDO
865	ENDDO
866
867	END SUBROUTINE pmc_s_getdata_from_buffer
868
869
870
871	SUBROUTINE get_da_names_from_child( childid )
872
873	!
874	!-- Get data array description and name from child
875	IMPLICIT NONE
876
877	INTEGER(iwp), INTENT(IN) :: childid !<
878
879	TYPE(da_namedef) :: myname !<
880
881	DO
882	CALL pmc_bcast( myname%couple_index, 0, comm=m_to_child_comm(childid) )
883
884	IF ( myname%couple_index == -1 ) EXIT
885
886	CALL pmc_bcast( myname%parentdesc, 0, comm=m_to_child_comm(childid) )
887	CALL pmc_bcast( myname%nameonparent, 0, comm=m_to_child_comm(childid) )
888	CALL pmc_bcast( myname%childdesc, 0, comm=m_to_child_comm(childid) )
889	CALL pmc_bcast( myname%nameonchild, 0, comm=m_to_child_comm(childid) )
890
891	CALL pmc_g_setname( children(childid), myname%couple_index, &
892	myname%nameonparent )
893	ENDDO
894
895	END SUBROUTINE get_da_names_from_child
896
897
898
899	SUBROUTINE pmc_s_setarray(childid, nrdims, dims, array_adr, second_adr, dimkey )
900
901	!
902	!-- Set array for child inter process 0
903	IMPLICIT NONE
904
905	INTEGER(iwp), INTENT(IN) :: childid !<
906	INTEGER(iwp), INTENT(IN) :: nrdims !<
907	INTEGER(iwp), INTENT(IN), DIMENSION(:) :: dims !<
908
909	TYPE(C_PTR), INTENT(IN) :: array_adr !<
910	TYPE(C_PTR), INTENT(IN), OPTIONAL :: second_adr !<
911	INTEGER(iwp), INTENT(IN), OPTIONAL :: dimkey !<
912
913	INTEGER(iwp) :: i !< local counter
914
915	TYPE(pedef), POINTER :: ape !<
916	TYPE(arraydef), POINTER :: ar !<
917
918
919	DO i = 1, children(childid)%inter_npes
920	ape => children(childid)%pes(i)
921	ar => ape%array_list(next_array_in_list)
922	ar%nrdims = nrdims
923	ar%dimkey = nrdims
924	IF(PRESENT(dimkey)) ar%dimkey = dimkey
925	ar%a_dim = dims
926	ar%data = array_adr
927	IF ( PRESENT( second_adr ) ) THEN
928	ar%po_data(1) = array_adr
929	ar%po_data(2) = second_adr
930	ELSE
931	ar%po_data(1) = C_NULL_PTR
932	ar%po_data(2) = C_NULL_PTR
933	ENDIF
934	ENDDO
935
936	END SUBROUTINE pmc_s_setarray
937
938
939
940	SUBROUTINE pmc_s_set_active_data_array( childid, iactive )
941
942	IMPLICIT NONE
943
944	INTEGER(iwp), INTENT(IN) :: childid !<
945	INTEGER(iwp), INTENT(IN) :: iactive !<
946
947	INTEGER(iwp) :: ip !<
948	INTEGER(iwp) :: j !<
949
950	TYPE(pedef), POINTER :: ape !<
951	TYPE(arraydef), POINTER :: ar !<
952
953	DO ip = 1, children(childid)%inter_npes
954	ape => children(childid)%pes(ip)
955	DO j = 1, ape%nr_arrays
956	ar => ape%array_list(j)
957	if(mod(ar%dimkey,10) == 2) CYCLE !Not for 2D array
958	IF ( iactive == 1 .OR. iactive == 2 ) THEN
959	ar%data = ar%po_data(iactive)
960	ENDIF
961	ENDDO
962	ENDDO
963
964	END SUBROUTINE pmc_s_set_active_data_array
965
966	INTEGER FUNCTION pmc_s_get_child_npes (child_id)
967	IMPLICIT NONE
968
969	INTEGER(iwp),INTENT(IN) :: child_id
970
971	pmc_s_get_child_npes = children(child_id)%inter_npes
972
973	RETURN
974	END FUNCTION pmc_s_get_child_npes
975
976
977	SUBROUTINE set_pe_index_list( mychild, index_list, nrp )
978
979	IMPLICIT NONE
980
981	INTEGER(iwp), INTENT(IN), DIMENSION(:,:) :: index_list !<
982	INTEGER(iwp), INTENT(IN) :: nrp !<
983
984	TYPE(childdef), INTENT(INOUT) :: mychild !<
985
986	INTEGER(iwp) :: i !<
987	INTEGER(iwp) :: ierr !<
988	INTEGER(iwp) :: ind !<
989	INTEGER(iwp) :: indwin !<
990	INTEGER(iwp) :: indwin2 !<
991	INTEGER(iwp) :: i2 !<
992	INTEGER(iwp) :: j !<
993	INTEGER(iwp) :: rempe !<
994	INTEGER(KIND=MPI_ADDRESS_KIND) :: winsize !<
995
996	INTEGER(iwp), DIMENSION(mychild%inter_npes) :: remind !<
997
998	INTEGER(iwp), DIMENSION(:), POINTER :: remindw !<
999	INTEGER(iwp), DIMENSION(:), POINTER :: rldef !<
1000
1001	TYPE(pedef), POINTER :: ape !<
1002
1003	!
1004	!-- First, count entries for every remote child process
1005	DO i = 1, mychild%inter_npes
1006	ape => mychild%pes(i)
1007	ape%nrele = 0
1008	ENDDO
1009	!
1010	!-- Loop over number of coarse grid cells
1011	DO j = 1, nrp
1012	rempe = index_list(5,j) + 1 ! process number on remote process
1013	ape => mychild%pes(rempe)
1014	ape%nrele = ape%nrele + 1 ! Increment number of elements for this child process
1015	ENDDO
1016
1017	DO i = 1, mychild%inter_npes
1018	ape => mychild%pes(i)
1019	ALLOCATE( ape%locind(ape%nrele) )
1020	ENDDO
1021
1022	remind = 0
1023	!
1024	!-- Second, create lists
1025	!-- Loop over number of coarse grid cells
1026	DO j = 1, nrp
1027	rempe = index_list(5,j) + 1
1028	ape => mychild%pes(rempe)
1029	remind(rempe) = remind(rempe)+1
1030	ind = remind(rempe)
1031	ape%locind(ind)%i = index_list(1,j)
1032	ape%locind(ind)%j = index_list(2,j)
1033	ENDDO
1034	!
1035	!-- Prepare number of elements for children processes
1036	CALL pmc_alloc_mem( rldef, mychild%inter_npes*2 )
1037	!
1038	!-- Number of child processes * size of INTEGER (i just arbitrary INTEGER)
1039	winsize = mychild%inter_npesSTORAGE_SIZE(i)/82
1040
1041	CALL MPI_WIN_CREATE( rldef, winsize, iwp, MPI_INFO_NULL, &
1042	mychild%intra_comm, indwin, ierr )
1043	!
1044	!-- Open window to set data
1045	CALL MPI_WIN_FENCE( 0, indwin, ierr )
1046
1047	rldef(1) = 0 ! index on remote process 0
1048	rldef(2) = remind(1) ! number of elements on remote process 0
1049	!
1050	!-- Reserve buffer for index array
1051	DO i = 2, mychild%inter_npes
1052	i2 = (i-1) * 2 + 1
1053	rldef(i2) = rldef(i2-2) + rldef(i2-1) * 2 ! index on remote process
1054	rldef(i2+1) = remind(i) ! number of elements on remote process
1055	ENDDO
1056	!
1057	!-- Close window to allow child to access data
1058	CALL MPI_WIN_FENCE( 0, indwin, ierr )
1059	!
1060	!-- Child has retrieved data
1061	CALL MPI_WIN_FENCE( 0, indwin, ierr )
1062
1063	i2 = 2 * mychild%inter_npes - 1
1064	winsize = ( rldef(i2) + rldef(i2+1) ) * 2
1065	!
1066	!-- Make sure, MPI_ALLOC_MEM works
1067	winsize = MAX( winsize, INT( 1, MPI_ADDRESS_KIND ) )
1068
1069	CALL pmc_alloc_mem( remindw, INT( winsize ) )
1070
1071	CALL MPI_BARRIER( m_model_comm, ierr )
1072	CALL MPI_WIN_CREATE( remindw, winsize*STORAGE_SIZE(i)/8, iwp, MPI_INFO_NULL, &
1073	mychild%intra_comm, indwin2, ierr )
1074	!
1075	!-- Open window to set data
1076	CALL MPI_WIN_FENCE( 0, indwin2, ierr )
1077	!
1078	!-- Create the 2D index list
1079	DO j = 1, nrp
1080	rempe = index_list(5,j) + 1 ! process number on remote process
1081	ape => mychild%pes(rempe)
1082	i2 = rempe * 2 - 1
1083	ind = rldef(i2) + 1
1084	remindw(ind) = index_list(3,j)
1085	remindw(ind+1) = index_list(4,j)
1086	rldef(i2) = rldef(i2)+2
1087	ENDDO
1088	!
1089	!-- All data are set
1090	CALL MPI_WIN_FENCE( 0, indwin2, ierr )
1091	!
1092	!-- Don't know why, but this barrier is necessary before windows can be freed
1093	!-- TODO: find out why this is required
1094	CALL MPI_BARRIER( mychild%intra_comm, ierr )
1095
1096	CALL MPI_WIN_FREE( indwin, ierr )
1097	CALL MPI_WIN_FREE( indwin2, ierr )
1098
1099	!
1100	!-- TODO: check if the following idea needs to be done
1101	!-- Sollte funktionieren, Problem mit MPI implementation
1102	!-- https://www.lrz.de/services/software/parallel/mpi/onesided
1103	!-- CALL MPI_Free_mem (remindw, ierr)
1104
1105	END SUBROUTINE set_pe_index_list
1106
1107	#endif
1108	END MODULE pmc_parent

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

| Impressum | ©Leibniz Universität Hannover |