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source: palm/trunk/SOURCE/parin.f90 @ 4851

Last change on this file since 4851 was 4845, checked in by raasch, 4 years ago
maximum phase velocities are alwasy used for radiation boundary conditions, parameter use_cmax removed
Property svn:keywords set to `Id`
File size: 46.9 KB

Rev	Line
[1682]	1	!> @file parin.f90
[4797]	2	!--------------------------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1036]	4	!
[4797]	5	! PALM is free software: you can redistribute it and/or modify it under the terms of the GNU General
	6	! Public License as published by the Free Software Foundation, either version 3 of the License, or
	7	! (at your option) any later version.
[1036]	8	!
[4797]	9	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the
	10	! implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
	11	! Public License for more details.
[1036]	12	!
[4797]	13	! You should have received a copy of the GNU General Public License along with PALM. If not, see
	14	! <http://www.gnu.org/licenses/>.
[1036]	15	!
[4828]	16	! Copyright 1997-2021 Leibniz Universitaet Hannover
[4797]	17	!--------------------------------------------------------------------------------------------------!
[1036]	18	!
[257]	19	! Current revisions:
[1484]	20	! -----------------
[4680]	21	!
	22	!
[2233]	23	! Former revisions:
	24	! -----------------
	25	! $Id: parin.f90 4845 2021-01-18 11:15:37Z gronemeier $
[4845]	26	! -use_cmax
	27	!
	28	! 4842 2021-01-14 10:42:28Z raasch
[4842]	29	! reading of namelist file and actions in case of namelist errors revised so that statement labels
	30	! and goto statements are not required any more,
	31	! deprecated namelists removed
	32	!
	33	! 4828 2021-01-05 11:21:41Z Giersch
[4797]	34	! file re-formatted to follow the PALM coding standard
	35	!
	36	! 4783 2020-11-13 13:58:45Z raasch
[4783]	37	! bugfix for reading restart data with MPI-I/O (does not work with blockwise I/O)
	38	!
	39	! 4680 2020-09-16 10:20:34Z gronemeier
[4680]	40	! Add option to fix date or time of the simulation
	41	!
	42	! 4565 2020-06-15 08:30:38Z oliver.maas
[4565]	43	! added pt_surface_heating_rate
[4680]	44	!
[4565]	45	! 4564 2020-06-12 14:03:36Z raasch
[4564]	46	! Vertical nesting method of Huq et al. (2019) removed
[4680]	47	!
[4564]	48	! 4536 2020-05-17 17:24:13Z raasch
[4535]	49	! bugfix for restart data format query
[4680]	50	!
[4535]	51	! 4505 2020-04-20 15:37:15Z schwenkel
[4505]	52	! Add flag for saturation check
[4680]	53	!
[4505]	54	! 4495 2020-04-13 20:11:20Z raasch
[4495]	55	! restart data handling with MPI-IO added
[4680]	56	!
[4495]	57	! 4360 2020-01-07 11:25:50Z suehring
[4301]	58	! removed recycling_yshift
[4680]	59	!
[4301]	60	! 4227 2019-09-10 18:04:34Z gronemeier
[4227]	61	! implement new palm_date_time_mod
[4680]	62	!
[4227]	63	! 4146 2019-08-07 07:47:36Z gronemeier
[4196]	64	! added rotation_angle to initialization_parameters
[4680]	65	!
[4196]	66	! 4191 2019-08-27 15:45:07Z gronemeier
[4191]	67	! bugfix: add recycling_method_for_thermodynamic_quantities to inipar namelist
[4680]	68	!
[4191]	69	! 4183 2019-08-23 07:33:16Z oliver.maas
[4183]	70	! replaced recycle_absolute_quantities by recycling_method_for_thermodynamic_quantities
[4680]	71	!
[4183]	72	! 4182 2019-08-22 15:20:23Z scharf
[4182]	73	! Corrected "Former revisions" section
[4680]	74	!
[4182]	75	! 4176 2019-08-20 14:10:41Z oliver.maas
[4176]	76	! added recycle_absolute_quantities to initialization_parameters namelist
[4680]	77	!
[4176]	78	! 4173 2019-08-20 12:04:06Z gronemeier
[4173]	79	! add vdi_internal_controls
[4680]	80	!
[4173]	81	! 4131 2019-08-02 11:06:18Z monakurppa
[4131]	82	! Allocate hom and hom_sum to allow profile output for salsa variables.
[4680]	83	!
[4131]	84	! 4079 2019-07-09 18:04:41Z suehring
[4079]	85	! +monotonic_limiter_z
[4680]	86	!
[4079]	87	! 4022 2019-06-12 11:52:39Z suehring
[4797]	88	! Change default top boundary condition for pressure to Neumann in offline nesting case
[4680]	89	!
[4022]	90	! 4017 2019-06-06 12:16:46Z schwenkel
[3987]	91	! Introduce alternative switch for debug output during timestepping
[4680]	92	!
[3987]	93	! 3885 2019-04-11 11:29:34Z kanani
[4797]	94	! Changes related to global restructuring of location messages and introduction of additional debug
	95	! messages
[4680]	96	!
[3885]	97	! 3806 2019-03-21 12:45:50Z raasch
[3806]	98	! additional check for lateral boundary conditions added
[4680]	99	!
[3806]	100	! 3747 2019-02-16 15:15:23Z gronemeier
[3747]	101	! removed setting of parameter region
[4680]	102	!
[3747]	103	! 3746 2019-02-16 12:41:27Z gronemeier
[3668]	104	! Removed most_method
[4680]	105	!
[3668]	106	! 3649 2019-01-02 16:52:21Z suehring
[3649]	107	! Delete debug-print statements
[3569]	108	!
[4182]	109	! Revision 1.1 1997/07/24 11:22:50 raasch
	110	! Initial revision
	111	!
	112	!
[1]	113	! Description:
	114	! ------------
[1682]	115	!> This subroutine reads variables controling the run from the NAMELIST files
[3298]	116	!>
	117	!> @todo: Revise max_pr_cs (profiles for chemistry)
[4797]	118	!--------------------------------------------------------------------------------------------------!
[1682]	119	SUBROUTINE parin
[1]	120
[4680]	121
[4797]	122	USE arrays_3d, &
	123	ONLY: pt_init, q_init, ref_state, s_init, sa_init, ug, u_init, v_init, vg
[1320]	124
[2696]	125	USE chem_modules
[1320]	126
[1762]	127	USE control_parameters
[1320]	128
[4797]	129	USE cpulog, &
[1320]	130	ONLY: cpu_log_barrierwait
	131
[4797]	132	USE grid_variables, &
[1320]	133	ONLY: dx, dy
	134
[4797]	135	USE indices, &
[1320]	136	ONLY: nx, ny, nz
	137
[1764]	138	USE kinds
	139
[4797]	140	USE model_1d_mod, &
[1320]	141	ONLY: damp_level_1d, dt_pr_1d, dt_run_control_1d, end_time_1d
	142
[4797]	143	USE module_interface, &
[3637]	144	ONLY: module_interface_parin
[3159]	145
[4797]	146	USE netcdf_interface, &
[1783]	147	ONLY: netcdf_data_format, netcdf_deflate, netcdf_precision
	148
[2696]	149	USE pegrid
[3448]	150
[4797]	151	USE pmc_interface, &
[1933]	152	ONLY: nested_run, nesting_mode
[1764]	153
[4797]	154	USE profil_parameter, &
[2298]	155	ONLY: cross_profiles, profile_columns, profile_rows
[1320]	156
[4797]	157	USE progress_bar, &
[3313]	158	ONLY : progress_bar_disabled
[1402]	159
[4797]	160	USE read_restart_data_mod, &
[3637]	161	ONLY: rrd_global
[2894]	162
[4797]	163	USE statistics, &
[3746]	164	ONLY: hom, hom_sum, pr_palm, statistic_regions
[1320]	165
[4797]	166	USE turbulence_closure_mod, &
[3083]	167	ONLY: rans_const_c, rans_const_sigma
	168
[1914]	169
[1]	170	IMPLICIT NONE
	171
[4842]	172	CHARACTER(LEN=100) :: line !< dummy string that contains the current line of the parameter
	173	!< file
[2849]	174
[2600]	175	INTEGER(iwp) :: global_id !< process id with respect to MPI_COMM_WORLD
	176	INTEGER(iwp) :: global_procs !< # of procs with respect to MPI_COMM_WORLD
	177	INTEGER(iwp) :: i !<
[4842]	178	INTEGER(iwp) :: io_status !< status after reading the namelist files
[1]	179
[2932]	180
[4797]	181	NAMELIST /initialization_parameters/ alpha_surface, &
	182	approximation, &
	183	bc_e_b, &
	184	bc_lr, &
	185	bc_ns, &
	186	bc_p_b, &
	187	bc_p_t, &
	188	bc_pt_b, &
	189	bc_pt_t, &
	190	bc_q_b, &
	191	bc_q_t, &
	192	bc_s_b, &
	193	bc_s_t, &
	194	bc_uv_b, &
	195	bc_uv_t, &
	196	building_height, &
	197	building_length_x, &
	198	building_length_y, &
	199	building_wall_left, &
	200	building_wall_south, &
	201	calc_soil_moisture_during_spinup, &
	202	call_psolver_at_all_substeps, &
	203	canyon_height, &
	204	canyon_wall_left, &
	205	canyon_wall_south, &
	206	canyon_width_x, &
	207	canyon_width_y, &
	208	cfl_factor, &
	209	check_realistic_q, &
	210	cloud_droplets, &
	211	collective_wait, &
	212	complex_terrain, &
	213	conserve_volume_flow, &
	214	conserve_volume_flow_mode, &
	215	constant_flux_layer, &
	216	coupling_start_time, &
	217	cycle_mg, &
	218	damp_level_1d, &
	219	data_output_during_spinup, &
	220	dissipation_1d, &
	221	dp_external, &
	222	dp_level_b, &
	223	dp_smooth, dpdxy, &
	224	dt, &
	225	dt_pr_1d, &
	226	dt_run_control_1d, &
	227	dt_spinup, &
	228	dx, &
	229	dy, &
	230	dz, &
	231	dz_max, &
	232	dz_stretch_factor, &
	233	dz_stretch_level, &
	234	dz_stretch_level_start, &
	235	dz_stretch_level_end, &
	236	e_init, &
	237	e_min, &
	238	end_time_1d, &
	239	ensemble_member_nr, &
	240	fft_method, &
	241	flux_input_mode, &
	242	flux_output_mode, &
	243	galilei_transformation, &
	244	humidity, &
	245	inflow_damping_height, &
	246	inflow_damping_width, &
	247	inflow_disturbance_begin, &
	248	inflow_disturbance_end, &
	249	initializing_actions, &
	250	km_constant, &
	251	large_scale_forcing, &
	252	large_scale_subsidence, &
	253	latitude, &
	254	longitude, &
	255	loop_optimization, &
	256	lsf_exception, &
	257	masking_method, &
	258	mg_cycles, &
	259	mg_switch_to_pe0_level, &
	260	mixing_length_1d, &
	261	momentum_advec, &
	262	monotonic_limiter_z, &
	263	netcdf_precision, &
	264	neutral, &
	265	ngsrb, &
	266	nsor, &
	267	nsor_ini, &
	268	nudging, &
	269	nx, &
	270	ny, &
	271	nz, &
	272	ocean_mode, &
	273	omega, &
	274	omega_sor, &
	275	origin_date_time, &
	276	outflow_source_plane, &
	277	passive_scalar, &
	278	prandtl_number, &
	279	psolver, &
	280	pt_damping_factor, &
	281	pt_damping_width, &
	282	pt_reference, pt_surface, &
	283	pt_surface_heating_rate, &
	284	pt_surface_initial_change, &
	285	pt_vertical_gradient, &
	286	pt_vertical_gradient_level, &
	287	q_surface, &
	288	q_surface_initial_change, &
	289	q_vertical_gradient, &
	290	q_vertical_gradient_level, &
	291	random_generator, &
	292	random_heatflux, &
	293	rans_const_c, &
	294	rans_const_sigma, &
	295	rayleigh_damping_factor, &
	296	rayleigh_damping_height, &
	297	recycling_method_for_thermodynamic_quantities, &
	298	recycling_width, &
	299	reference_state, &
	300	residual_limit, &
	301	restart_data_format, &
	302	restart_data_format_input, &
	303	restart_data_format_output, &
	304	rotation_angle, &
	305	roughness_length, &
	306	s_surface, &
	307	s_surface_initial_change, &
	308	s_vertical_gradient, &
	309	s_vertical_gradient_level, &
	310	scalar_advec, &
	311	scalar_rayleigh_damping, &
	312	spinup_time, &
	313	spinup_pt_amplitude, &
	314	spinup_pt_mean, &
	315	statistic_regions, &
	316	subs_vertical_gradient, &
	317	subs_vertical_gradient_level, &
	318	surface_heatflux, &
	319	surface_pressure, &
	320	surface_scalarflux, &
	321	surface_waterflux, &
	322	timestep_scheme, &
	323	topography, &
	324	topography_grid_convention, &
	325	top_heatflux, &
	326	top_momentumflux_u, &
	327	top_momentumflux_v, &
	328	top_scalarflux, &
	329	transpose_compute_overlap, &
	330	tunnel_height, &
	331	tunnel_length, &
	332	tunnel_wall_depth, &
	333	tunnel_width_x, &
	334	tunnel_width_y, &
	335	turbulence_closure, &
	336	turbulent_inflow, &
	337	turbulent_outflow, &
	338	u_bulk, &
	339	u_profile, &
	340	ug_surface, &
	341	ug_vertical_gradient, &
	342	ug_vertical_gradient_level, &
	343	use_fixed_date, &
	344	use_fixed_time, &
	345	use_free_convection_scaling, &
	346	use_ug_for_galilei_tr, &
	347	use_subsidence_tendencies, &
[4845]	348	use_surface_fluxes, &
[4797]	349	use_top_fluxes, &
	350	use_upstream_for_tke, &
	351	uv_heights, &
	352	v_bulk, &
	353	v_profile, &
	354	vdi_checks, &
	355	vg_surface, &
	356	vg_vertical_gradient, &
	357	vg_vertical_gradient_level, &
	358	wall_adjustment, &
	359	wall_heatflux, &
	360	wall_humidityflux, &
	361	wall_scalarflux, &
	362	y_shift, &
	363	zeta_max, &
	364	zeta_min, &
	365	z0h_factor
[4680]	366
[4797]	367	NAMELIST /runtime_parameters/ averaging_interval, &
	368	averaging_interval_pr, &
	369	cpu_log_barrierwait, &
	370	create_disturbances, &
	371	cross_profiles, &
	372	data_output, &
	373	data_output_2d_on_each_pe, &
	374	data_output_masks, &
	375	data_output_pr, &
	376	debug_output, &
	377	debug_output_timestep, &
	378	disturbance_amplitude, &
	379	disturbance_energy_limit, &
	380	disturbance_level_b, &
	381	disturbance_level_t, &
	382	do2d_at_begin, &
	383	do3d_at_begin, &
	384	dt, &
	385	dt_averaging_input, &
	386	dt_averaging_input_pr, &
	387	dt_coupling, &
	388	dt_data_output, &
	389	dt_data_output_av, &
	390	dt_disturb, &
	391	dt_domask, &
	392	dt_dopr, &
	393	dt_dopr_listing, &
	394	dt_dots, &
	395	dt_do2d_xy, &
	396	dt_do2d_xz, &
	397	dt_do2d_yz, &
	398	dt_do3d, &
	399	dt_max, &
	400	dt_restart, &
	401	dt_run_control, &
	402	end_time, &
	403	force_print_header, &
	404	mask_k_over_surface, &
	405	mask_scale_x, &
	406	mask_scale_y, &
	407	mask_scale_z, &
	408	mask_x, &
	409	mask_y, &
	410	mask_z, &
	411	mask_x_loop, &
	412	mask_y_loop, &
	413	mask_z_loop, &
	414	netcdf_data_format, &
	415	netcdf_deflate, &
	416	normalizing_region, &
	417	npex, &
	418	npey, &
	419	nz_do3d, &
	420	profile_columns, &
	421	profile_rows, &
	422	restart_time, &
	423	section_xy, &
	424	section_xz, &
	425	section_yz, &
	426	restart_data_format, &
	427	restart_data_format_input, &
	428	restart_data_format_output, &
	429	skip_time_data_output, &
	430	skip_time_data_output_av, &
	431	skip_time_dopr, &
	432	skip_time_do2d_xy, &
	433	skip_time_do2d_xz, &
	434	skip_time_do2d_yz, &
	435	skip_time_do3d, &
	436	skip_time_domask, &
	437	synchronous_exchange, &
	438	termination_time_needed
[1]	439
[4797]	440	NAMELIST /envpar/ host, &
	441	maximum_cpu_time_allowed, &
	442	maximum_parallel_io_streams, &
	443	progress_bar_disabled, &
	444	read_svf, &
	445	revision, &
	446	run_identifier, &
	447	tasks_per_node, &
	448	write_binary, &
	449	write_svf
[1]	450
	451	!
[4797]	452	!-- First read values of environment variables (this NAMELIST file is generated by palmrun)
[3885]	453	CALL location_message( 'reading environment parameters from ENVPAR', 'start' )
[2310]	454
[4842]	455	OPEN( 90, FILE='ENVPAR', STATUS='OLD', FORM='FORMATTED', IOSTAT=io_status )
[2310]	456
[4842]	457	IF ( io_status /= 0 ) THEN
[4797]	458	message_string = 'local file ENVPAR not found' // &
[3046]	459	'&some variables for steering may not be properly set'
[2310]	460	CALL message( 'parin', 'PA0276', 0, 1, 0, 6, 0 )
	461	ELSE
[4842]	462	READ( 90, envpar, IOSTAT=io_status )
	463	IF ( io_status < 0 ) THEN
[4797]	464	message_string = 'no envpar-NAMELIST found in local file ' // &
[4842]	465	'ENVPAR& or some variables for steering may not be properly set'
[2310]	466	CALL message( 'parin', 'PA0278', 0, 1, 0, 6, 0 )
[4842]	467	ELSEIF ( io_status > 0 ) THEN
[4797]	468	message_string = 'errors in local file ENVPAR' // &
[3046]	469	'&some variables for steering may not be properly set'
[2310]	470	CALL message( 'parin', 'PA0277', 0, 1, 0, 6, 0 )
	471	ENDIF
[4797]	472	CLOSE( 90 )
[2310]	473	ENDIF
	474
[3885]	475	CALL location_message( 'reading environment parameters from ENVPAR', 'finished' )
[4783]	476
	477	CALL location_message( 'reading NAMELIST parameters from PARIN', 'start' )
	478
[1]	479	!
[4783]	480	!-- Open the NAMELIST-file which is send with this job
	481	CALL check_open( 11 )
	482
	483	!
	484	!-- Read the control parameters for initialization.
[4842]	485	!-- The namelist "initialisation_parameters" must be provided in the NAMELIST-file.
	486	READ( 11, initialization_parameters, IOSTAT=io_status )
[4783]	487
[4842]	488	!
	489	!-- Action depending on the READ status
	490	IF ( io_status > 0 ) THEN
	491	!
	492	!-- initialisation_parameters namelist was found but countained errors. Print an error message
	493	!- including the line that caused the problem.
	494	BACKSPACE( 11 )
	495	READ( 11 , '(A)' ) line
	496	CALL parin_fail_message( 'initialization_parameters', line )
[4783]	497
[4842]	498	ELSEIF ( io_status < 0 ) THEN
	499	!
	500	!-- initialisation_parametes namelist was not found. Return a message.
	501	message_string = 'no initialization_parameters-namelist found'
	502	CALL message( 'parin', 'PA0272', 1, 2, 0, 6, 0 )
[4783]	503
[4842]	504	ENDIF
[4783]	505	!
[4797]	506	!-- Try to read runtime parameters given by the user for this run (namelist "runtime_parameters").
	507	!-- The namelist "runtime_parmeters" can be omitted. In that case default values are used for the
[4783]	508	!-- parameters.
[4797]	509	REWIND( 11 )
[4842]	510	READ( 11, runtime_parameters, IOSTAT=io_status )
[4783]	511
[4842]	512	IF ( io_status > 0 ) THEN
[4783]	513	!
[4842]	514	!-- Namelist runtime_parameters was found but contained errors. Print an error message including
	515	!-- the line that caused the problem.
	516	BACKSPACE( 11 )
	517	READ( 11 , '(A)') line
	518	CALL parin_fail_message( 'runtime_parameters', line )
[4783]	519
[4842]	520	ENDIF
[4783]	521
	522	!
	523	!-- Check for module namelists and read them
	524	CALL module_interface_parin
	525
	526	!
[759]	527	!-- Calculate the number of groups into which parallel I/O is split.
[4797]	528	!-- The default for files which are opened by all PEs (or where each PE opens its own independent
	529	!-- file) is, that all PEs are doing input/output in parallel at the same time. This might cause
	530	!-- performance or even more severe problems depending on the configuration of the underlying file
[759]	531	!-- system.
[4797]	532	!-- Calculation of the number of blocks and the I/O group must be based on all PEs involved in this
	533	!-- run. Since myid and numprocs are related to the comm2d communicator, which gives only a subset
	534	!-- of all PEs in case of nested runs, that information must be inquired again from the global
[2600]	535	!-- communicator.
[759]	536	!-- First, set the default:
[2967]	537	#if defined( __parallel )
[2600]	538	CALL MPI_COMM_RANK( MPI_COMM_WORLD, global_id, ierr )
	539	CALL MPI_COMM_SIZE( MPI_COMM_WORLD, global_procs, ierr )
[2967]	540	#else
	541	global_id = 0
	542	global_procs = 1
	543	#endif
[4797]	544	IF ( maximum_parallel_io_streams == -1 .OR. maximum_parallel_io_streams > global_procs ) THEN
[2600]	545	maximum_parallel_io_streams = global_procs
[759]	546	ENDIF
	547	!
[4797]	548	!-- Now calculate the number of io_blocks and the io_group to which the respective PE belongs. I/O
	549	!-- of the groups is done in serial, but in parallel for all PEs belonging to the same group.
[2600]	550	io_blocks = global_procs / maximum_parallel_io_streams
	551	io_group = MOD( global_id+1, io_blocks )
[4680]	552
[759]	553	!
[4797]	554	!-- If required, read control parameters from restart file (produced by a prior run). All PEs are
	555	!-- reading from file created by PE0 (see check_open)
[4783]	556	IF ( TRIM( initializing_actions ) == 'read_restart_data' ) THEN
[559]	557
[1]	558	!
[4797]	559	!-- If not set by the user in the runtime parameters, the data format for restart input needs to
	560	!-- be set now! This is normally done later in check parameters.
	561	IF ( TRIM( restart_data_format ) /= 'fortran_binary' .AND. &
	562	TRIM( restart_data_format ) /= 'mpi' .AND. &
[4783]	563	TRIM( restart_data_format ) /= 'mpi_shared_memory' ) THEN
	564	message_string = 'illegal restart data format "' // TRIM( restart_data_format ) // '"'
	565	CALL message( 'parin', 'PA0724', 1, 2, 0, 6, 0 )
	566	ENDIF
	567	IF ( TRIM( restart_data_format_input ) == 'undefined' ) THEN
	568	restart_data_format_input = restart_data_format
	569	ENDIF
[559]	570
[1]	571	!
[4783]	572	!-- Blockwise I/O does not work together with MPI-I/O
	573	IF ( restart_data_format_input(1:3) == 'mpi' .AND. io_blocks /= 1 ) THEN
	574	CALL rrd_global
	575	ELSE
[146]	576	!
[4783]	577	!-- Data is read in parallel by groups of PEs
	578	DO i = 0, io_blocks-1
	579	IF ( i == io_group ) THEN
	580	CALL rrd_global
	581	ENDIF
	582	#if defined( __parallel )
	583	CALL MPI_BARRIER( comm2d, ierr )
	584	#endif
[2894]	585	ENDDO
[4783]	586	ENDIF
[2894]	587
[2932]	588
[3246]	589	!
[4783]	590	!-- Increment the run count
	591	runnr = runnr + 1
[2894]	592	!
[4797]	593	!-- In case of a restart run, the number of user-defined profiles on the restart file (already
	594	!-- stored in max_pr_user) has to match the one given for the current run. max_pr_user_tmp is
	595	!-- calculated in user_parin and max_pr_user is read in via rrd_global.
[4783]	596	IF ( max_pr_user /= max_pr_user_tmp ) THEN
[4797]	597	WRITE( message_string, * ) 'the number of user-defined ', &
	598	'profiles given in data_output_pr (', max_pr_user_tmp, &
	599	') does not match the one ', &
	600	'found in the restart file (', max_pr_user, ')'
[4783]	601	CALL message( 'user_parin', 'UI0009', 1, 2, 0, 6, 0 )
	602	ENDIF
	603	ELSE
	604	max_pr_user = max_pr_user_tmp
	605	ENDIF
[2894]	606	!
[4783]	607	!-- Activate spinup
[4797]	608	IF ( land_surface .OR. urban_surface ) THEN
[4783]	609	IF ( spinup_time > 0.0_wp ) THEN
	610	coupling_start_time = spinup_time
	611	time_since_reference_point = simulated_time - coupling_start_time
	612	IF ( spinup_pt_mean == 9999999.9_wp ) THEN
	613	spinup_pt_mean = pt_surface
[759]	614	ENDIF
[4783]	615	end_time = end_time + spinup_time
	616	IF ( TRIM( initializing_actions ) /= 'read_restart_data' ) THEN
	617	spinup = .TRUE.
[4797]	618	ELSEIF ( TRIM( initializing_actions ) == 'read_restart_data' .AND. &
	619	time_since_reference_point > 0.0_wp ) THEN
[4783]	620	data_output_during_spinup = .FALSE. !< required for correct ntdim calculation
	621	!< in check_parameters for restart run
[2921]	622	ENDIF
[4783]	623	ENDIF
	624	ENDIF
[2921]	625
	626	!
[4783]	627	!-- In case of nested runs, explicitly set nesting boundary conditions.
	628	!-- This will overwrite the user settings and basic defaults.
	629	!-- bc_lr and bc_ns always need to be cyclic for vertical nesting.
	630	IF ( nested_run ) THEN
	631	IF ( nesting_mode == 'vertical' ) THEN
[4797]	632	IF ( bc_lr /= 'cyclic' .OR. bc_ns /= 'cyclic' ) THEN
	633	WRITE ( message_string, *) 'bc_lr and bc_ns were set to ,', &
	634	'cyclic for vertical nesting'
[4783]	635	CALL message( 'parin', 'PA0428', 0, 0, 0, 6, 0 )
	636	bc_lr = 'cyclic'
	637	bc_ns = 'cyclic'
[1764]	638	ENDIF
[4783]	639	IF ( child_domain ) THEN
	640	bc_uv_t = 'nested'
	641	bc_pt_t = 'nested'
	642	bc_q_t = 'nested'
	643	bc_s_t = 'nested'
	644	bc_cs_t = 'nested'
	645	bc_p_t = 'neumann'
	646	ENDIF
[3182]	647	!
[4797]	648	!-- For other nesting modes only set boundary conditions for nested domains.
[4783]	649	ELSE
	650	IF ( child_domain ) THEN
	651	bc_lr = 'nested'
	652	bc_ns = 'nested'
	653	bc_uv_t = 'nested'
	654	bc_pt_t = 'nested'
	655	bc_q_t = 'nested'
	656	bc_s_t = 'nested'
	657	bc_cs_t = 'nested'
[4022]	658	bc_p_t = 'neumann'
[2696]	659	ENDIF
[4783]	660	ENDIF
	661	ENDIF
	662	!
[4797]	663	!-- Set boundary conditions also in case the model is offline-nested in larger-scale models.
[4783]	664	IF ( nesting_offline ) THEN
	665	bc_lr = 'nesting_offline'
	666	bc_ns = 'nesting_offline'
	667	bc_uv_t = 'nesting_offline'
	668	bc_pt_t = 'nesting_offline'
	669	bc_q_t = 'nesting_offline'
	670	! bc_s_t = 'nesting_offline' ! scalar boundary condition is not clear yet
	671	! bc_cs_t = 'nesting_offline' ! same for chemical species
	672	bc_p_t = 'neumann'
	673	ENDIF
[2696]	674
[4680]	675	!
[4797]	676	!-- In case of nested runs, make sure that initializing_actions = 'set_constant_profiles' even
	677	!-- though the constant-profiles initializations for the prognostic variables will be overwritten by
	678	!-- pmci_child_initialize and pmci_parent_initialize. This is, however, important e.g. to make sure
	679	!-- that diagnostic variables are set properly. An exception is made in case of restart runs and if
	680	!-- user decides to do everything by its own.
	681	IF ( child_domain .AND. .NOT. ( TRIM( initializing_actions ) == 'read_restart_data' .OR. &
	682	TRIM( initializing_actions ) == 'set_constant_profiles' .OR. &
	683	TRIM( initializing_actions ) == 'by_user' ) &
	684	) THEN
	685	message_string = 'initializing_actions = ' // TRIM( initializing_actions ) // &
	686	' has been ' // 'changed to set_constant_profiles in child ' // 'domain.'
[4783]	687	CALL message( 'parin', 'PA0492', 0, 0, 0, 6, 0 )
[2975]	688
[4783]	689	initializing_actions = 'set_constant_profiles'
	690	ENDIF
[1764]	691	!
[4797]	692	!-- Check validity of lateral boundary conditions. This has to be done here because they are already
	693	!-- used in init_pegrid and init_grid and therefore cannot be check in check_parameters
	694	IF ( bc_lr /= 'cyclic' .AND. bc_lr /= 'dirichlet/radiation' .AND. &
	695	bc_lr /= 'radiation/dirichlet' .AND. bc_lr /= 'nested' .AND. &
[4783]	696	bc_lr /= 'nesting_offline' ) THEN
[4797]	697	message_string = 'unknown boundary condition: bc_lr = "' // TRIM( bc_lr ) // '"'
[4783]	698	CALL message( 'parin', 'PA0049', 1, 2, 0, 6, 0 )
	699	ENDIF
[4797]	700	IF ( bc_ns /= 'cyclic' .AND. bc_ns /= 'dirichlet/radiation' .AND. &
	701	bc_ns /= 'radiation/dirichlet' .AND. bc_ns /= 'nested' .AND. &
[4783]	702	bc_ns /= 'nesting_offline' ) THEN
[4797]	703	message_string = 'unknown boundary condition: bc_ns = "' // TRIM( bc_ns ) // '"'
[4783]	704	CALL message( 'parin', 'PA0050', 1, 2, 0, 6, 0 )
	705	ENDIF
[1764]	706	!
[4783]	707	!-- Set internal variables used for speed optimization in if clauses
	708	IF ( bc_lr /= 'cyclic' ) bc_lr_cyc = .FALSE.
	709	IF ( bc_lr == 'dirichlet/radiation' ) bc_lr_dirrad = .TRUE.
	710	IF ( bc_lr == 'radiation/dirichlet' ) bc_lr_raddir = .TRUE.
	711	IF ( bc_ns /= 'cyclic' ) bc_ns_cyc = .FALSE.
	712	IF ( bc_ns == 'dirichlet/radiation' ) bc_ns_dirrad = .TRUE.
	713	IF ( bc_ns == 'radiation/dirichlet' ) bc_ns_raddir = .TRUE.
[1764]	714	!
[4783]	715	!-- Radiation-Dirichlet conditions are allowed along one of the horizontal directions only.
[4797]	716	!-- In general, such conditions along x and y may work, but require a) some code changes (e.g.
	717	!-- concerning allocation of c_u, c_v ... arrays), and b) a careful model setup by the user, in
	718	!-- order to guarantee that there is a clearly defined outflow at two sides.
[4783]	719	!-- Otherwise, the radiation condition may produce wrong results.
	720	IF ( ( bc_lr_dirrad .OR. bc_lr_raddir ) .AND. ( bc_ns_dirrad .OR. bc_ns_raddir ) ) THEN
[4797]	721	message_string = 'bc_lr = "' // TRIM( bc_lr ) // '" and bc_ns = "' // TRIM( bc_ns ) // &
	722	'" are not allowed to be set at the same time'
[4783]	723	CALL message( 'parin', 'PA0589', 1, 2, 0, 6, 0 )
	724	ENDIF
[3806]	725	!
[4797]	726	!-- Check in case of initial run, if the grid point numbers are well defined and allocate some
	727	!-- arrays which are already needed in init_pegrid or check_parameters. During restart jobs, these
	728	!-- arrays will be allocated in rrd_global. All other arrays are allocated in init_3d_model.
[4783]	729	IF ( TRIM( initializing_actions ) /= 'read_restart_data' ) THEN
[667]	730
[4783]	731	IF ( nx <= 0 ) THEN
[4797]	732	WRITE( message_string, * ) 'no value or wrong value given', ' for nx: nx=', nx
[4783]	733	CALL message( 'parin', 'PA0273', 1, 2, 0, 6, 0 )
	734	ENDIF
	735	IF ( ny <= 0 ) THEN
[4797]	736	WRITE( message_string, * ) 'no value or wrong value given', ' for ny: ny=', ny
[4783]	737	CALL message( 'parin', 'PA0274', 1, 2, 0, 6, 0 )
	738	ENDIF
	739	IF ( nz <= 0 ) THEN
[4797]	740	WRITE( message_string, * ) 'no value or wrong value given', ' for nz: nz=', nz
[4783]	741	CALL message( 'parin', 'PA0275', 1, 2, 0, 6, 0 )
	742	ENDIF
[3204]	743
[759]	744	!
[4797]	745	!-- As a side condition, routine flow_statistics require at least 14 vertical grid levels (they
	746	!-- are used to store time-series data)
[4783]	747	!> @todo Remove this restriction
	748	IF ( nz < 14 ) THEN
	749	WRITE( message_string, * ) 'nz >= 14 is required'
	750	CALL message( 'parin', 'PA0362', 1, 2, 0, 6, 0 )
	751	ENDIF
[3204]	752
	753	!
[4797]	754	!-- ATTENTION: in case of changes to the following statement please also check the allocate
	755	!-- statement in routine rrd_global
	756	ALLOCATE( pt_init(0:nz+1), q_init(0:nz+1), s_init(0:nz+1), &
	757	ref_state(0:nz+1), sa_init(0:nz+1), ug(0:nz+1), &
	758	u_init(0:nz+1), v_init(0:nz+1), vg(0:nz+1), &
	759	hom(0:nz+1,2,pr_palm+max_pr_user+max_pr_cs+max_pr_salsa,0:statistic_regions), &
[4783]	760	hom_sum(0:nz+1,pr_palm+max_pr_user+max_pr_cs+max_pr_salsa,0:statistic_regions) )
[1]	761
[4783]	762	hom = 0.0_wp
[1]	763
[4783]	764	ENDIF
[759]	765
[1]	766	!
[4783]	767	!-- NAMELIST-file is not needed anymore
	768	CALL close_file( 11 )
[1]	769
[3885]	770	CALL location_message( 'reading NAMELIST parameters from PARIN', 'finished' )
[1384]	771
[1]	772	END SUBROUTINE parin

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