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source: palm/trunk/SOURCE/netcdf.f90 @ 281

Last change on this file since 281 was 277, checked in by heinze, 16 years ago
Change of arguments in message calls whenever there are errors induced by MPI-ABORT
Property svn:keywords set to `Id`
File size: 142.8 KB

Line
1	#if defined( __ibmy_special )
2	@PROCESS NOOPTimize
3	#endif
4	SUBROUTINE define_netcdf_header( callmode, extend, av )
5
6	!------------------------------------------------------------------------------!
7	! Current revisions:
8	! ------------------
9	! Output of NetCDF messages with aid of message handling routine.
10	! Output of messages replaced by message handling routine.
11	!
12	!
13	! Former revisions:
14	! -----------------
15	! $Id: netcdf.f90 277 2009-03-31 09:13:47Z letzel $
16	!
17	! 216 2008-11-25 07:12:43Z raasch
18	! Origin of the xy-coordinate system shifted from the center of the first
19	! grid cell (indices i=0, j=0) to the south-left corner of this cell.
20	!
21	! 189 2008-08-13 17:09:26Z letzel
22	! consistently allow 100 spectra levels instead of 10
23	! bug fix in the determination of the number of output heights for spectra,
24	! +user-defined spectra
25	!
26	! 97 2007-06-21 08:23:15Z raasch
27	! Grids defined for rho and sa
28	!
29	! 48 2007-03-06 12:28:36Z raasch
30	! Output topography height information (zu_s_inner, zw_s_inner) to 2d-xy and 3d
31	! datasets
32	!
33	! RCS Log replace by Id keyword, revision history cleaned up
34	!
35	! Revision 1.12 2006/09/26 19:35:16 raasch
36	! Bugfix yv coordinates for yz cross sections
37	!
38	! Revision 1.1 2005/05/18 15:37:16 raasch
39	! Initial revision
40	!
41	!
42	! Description:
43	! ------------
44	! In case of extend = .FALSE.:
45	! Define all necessary dimensions, axes and variables for the different
46	! NetCDF datasets. This subroutine is called from check_open after a new
47	! dataset is created. It leaves the open NetCDF files ready to write.
48	!
49	! In case of extend = .TRUE.:
50	! Find out if dimensions and variables of an existing file match the values
51	! of the actual run. If so, get all necessary informations (ids, etc.) from
52	! this file.
53	!
54	! Parameter av can assume values 0 (non-averaged data) and 1 (time averaged
55	! data)
56	!------------------------------------------------------------------------------!
57	#if defined( __netcdf )
58
59	USE arrays_3d
60	USE constants
61	USE control_parameters
62	USE grid_variables
63	USE indices
64	USE netcdf_control
65	USE pegrid
66	USE particle_attributes
67	USE profil_parameter
68	USE spectrum
69	USE statistics
70
71
72	IMPLICIT NONE
73
74	CHARACTER (LEN=2) :: suffix
75	CHARACTER (LEN=2), INTENT (IN) :: callmode
76	CHARACTER (LEN=3) :: suffix1
77	CHARACTER (LEN=4) :: grid_x, grid_y, grid_z
78	CHARACTER (LEN=6) :: mode
79	CHARACTER (LEN=10) :: netcdf_var_name, netcdf_var_name_base, &
80	precision, var
81	CHARACTER (LEN=80) :: time_average_text
82	CHARACTER (LEN=2000) :: var_list, var_list_old
83
84	INTEGER :: av, i, id_x, id_y, id_z, j, ns, ns_old, nz_old
85
86	INTEGER, DIMENSION(1) :: id_dim_time_old, id_dim_x_yz_old, &
87	id_dim_y_xz_old, id_dim_zu_sp_old, &
88	id_dim_zu_xy_old, id_dim_zu_3d_old
89
90	LOGICAL :: found
91
92	LOGICAL, INTENT (INOUT) :: extend
93
94	LOGICAL, SAVE :: init_netcdf = .FALSE.
95
96	REAL, DIMENSION(1) :: last_time_coordinate
97
98	REAL, DIMENSION(:), ALLOCATABLE :: netcdf_data
99
100
101	!
102	!-- Initializing actions (return to calling routine check_parameters afterwards)
103	IF ( .NOT. init_netcdf ) THEN
104	!
105	!-- Check and set accuracy for NetCDF output. First set default value
106	nc_precision = NF90_REAL4
107
108	i = 1
109	DO WHILE ( netcdf_precision(i) /= ' ' )
110	j = INDEX( netcdf_precision(i), '_' )
111	IF ( j == 0 ) THEN
112	WRITE ( message_string, * ) 'netcdf_precision must contain a ', &
113	'"_"netcdf_precision(', i, ')="', &
114	TRIM( netcdf_precision(i) ),'"'
115	CALL message( 'define_netcdf_header', 'PA0241', 1, 2, 0, 6, 0 )
116	ENDIF
117
118	var = netcdf_precision(i)(1:j-1)
119	precision = netcdf_precision(i)(j+1:)
120
121	IF ( precision == 'NF90_REAL4' ) THEN
122	j = NF90_REAL4
123	ELSEIF ( precision == 'NF90_REAL8' ) THEN
124	j = NF90_REAL8
125	ELSE
126	WRITE ( message_string, * ) 'illegal netcdf precision: ', &
127	'netcdf_precision(', i, ')="', &
128	TRIM( netcdf_precision(i) ),'"'
129	CALL message( 'define_netcdf_header', 'PA0242', 1, 2, 0, 6, 0 )
130	ENDIF
131
132	SELECT CASE ( var )
133	CASE ( 'xy' )
134	nc_precision(1) = j
135	CASE ( 'xz' )
136	nc_precision(2) = j
137	CASE ( 'yz' )
138	nc_precision(3) = j
139	CASE ( '2d' )
140	nc_precision(1:3) = j
141	CASE ( '3d' )
142	nc_precision(4) = j
143	CASE ( 'pr' )
144	nc_precision(5) = j
145	CASE ( 'ts' )
146	nc_precision(6) = j
147	CASE ( 'sp' )
148	nc_precision(7) = j
149	CASE ( 'prt' )
150	nc_precision(8) = j
151	CASE ( 'all' )
152	nc_precision = j
153
154	CASE DEFAULT
155	WRITE ( message_string, * ) 'unknown variable in inipar ', &
156	'assignment: netcdf_precision(', i, ')="', &
157	TRIM( netcdf_precision(i) ),'"'
158	CALL message( 'define_netcdf_header', 'PA0243', 1, 2, 0, 6, 0 )
159
160	END SELECT
161
162	i = i + 1
163	IF ( i > 10 ) EXIT
164	ENDDO
165
166	init_netcdf = .TRUE.
167
168	RETURN
169
170	ENDIF
171
172	!
173	!-- Determine the mode to be processed
174	IF ( extend ) THEN
175	mode = callmode // '_ext'
176	ELSE
177	mode = callmode // '_new'
178	ENDIF
179
180	!
181	!-- Select the mode to be processed. Possibilities are xy, xz, yz, pr and ts.
182	SELECT CASE ( mode )
183
184	CASE ( '3d_new' )
185
186	!
187	!-- Define some global attributes of the dataset
188	nc_stat = NF90_PUT_ATT( id_set_3d(av), NF90_GLOBAL, 'Conventions', &
189	'COARDS' )
190	CALL handle_netcdf_error( 'netcdf', 62 )
191
192	IF ( av == 0 ) THEN
193	time_average_text = ' '
194	ELSE
195	WRITE (time_average_text, '('', '',F7.1,'' s average'')') &
196	averaging_interval
197	ENDIF
198	nc_stat = NF90_PUT_ATT( id_set_3d(av), NF90_GLOBAL, 'title', &
199	TRIM( run_description_header ) // &
200	TRIM( time_average_text ) )
201	CALL handle_netcdf_error( 'netcdf', 63 )
202	IF ( av == 1 ) THEN
203	WRITE ( time_average_text,'(F7.1,'' s avg'')' ) averaging_interval
204	nc_stat = NF90_PUT_ATT( id_set_3d(av), NF90_GLOBAL, 'time_avg', &
205	TRIM( time_average_text ) )
206	CALL handle_netcdf_error( 'netcdf', 63 )
207	ENDIF
208
209	!
210	!-- Define time coordinate for volume data (unlimited dimension)
211	nc_stat = NF90_DEF_DIM( id_set_3d(av), 'time', NF90_UNLIMITED, &
212	id_dim_time_3d(av) )
213	CALL handle_netcdf_error( 'netcdf', 64 )
214
215	nc_stat = NF90_DEF_VAR( id_set_3d(av), 'time', NF90_DOUBLE, &
216	id_dim_time_3d(av), id_var_time_3d(av) )
217	CALL handle_netcdf_error( 'netcdf', 65 )
218
219	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_time_3d(av), 'units', &
220	'seconds')
221	CALL handle_netcdf_error( 'netcdf', 66 )
222
223	!
224	!-- Define spatial dimensions and coordinates:
225	!-- Define vertical coordinate grid (zu grid)
226	nc_stat = NF90_DEF_DIM( id_set_3d(av), 'zu_3d', nz_do3d-nzb+1, &
227	id_dim_zu_3d(av) )
228	CALL handle_netcdf_error( 'netcdf', 67 )
229
230	nc_stat = NF90_DEF_VAR( id_set_3d(av), 'zu_3d', NF90_DOUBLE, &
231	id_dim_zu_3d(av), id_var_zu_3d(av) )
232	CALL handle_netcdf_error( 'netcdf', 68 )
233
234	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_zu_3d(av), 'units', &
235	'meters' )
236	CALL handle_netcdf_error( 'netcdf', 69 )
237
238	!
239	!-- Define vertical coordinate grid (zw grid)
240	nc_stat = NF90_DEF_DIM( id_set_3d(av), 'zw_3d', nz_do3d-nzb+1, &
241	id_dim_zw_3d(av) )
242	CALL handle_netcdf_error( 'netcdf', 70 )
243
244	nc_stat = NF90_DEF_VAR( id_set_3d(av), 'zw_3d', NF90_DOUBLE, &
245	id_dim_zw_3d(av), id_var_zw_3d(av) )
246	CALL handle_netcdf_error( 'netcdf', 71 )
247
248	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_zw_3d(av), 'units', &
249	'meters' )
250	CALL handle_netcdf_error( 'netcdf', 72 )
251
252	!
253	!-- Define x-axis (for scalar position)
254	nc_stat = NF90_DEF_DIM( id_set_3d(av), 'x', nx+2, id_dim_x_3d(av) )
255	CALL handle_netcdf_error( 'netcdf', 73 )
256
257	nc_stat = NF90_DEF_VAR( id_set_3d(av), 'x', NF90_DOUBLE, &
258	id_dim_x_3d(av), id_var_x_3d(av) )
259	CALL handle_netcdf_error( 'netcdf', 74 )
260
261	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_x_3d(av), 'units', &
262	'meters' )
263	CALL handle_netcdf_error( 'netcdf', 75 )
264
265	!
266	!-- Define x-axis (for u position)
267	nc_stat = NF90_DEF_DIM( id_set_3d(av), 'xu', nx+2, id_dim_xu_3d(av) )
268	CALL handle_netcdf_error( 'netcdf', 358 )
269
270	nc_stat = NF90_DEF_VAR( id_set_3d(av), 'xu', NF90_DOUBLE, &
271	id_dim_xu_3d(av), id_var_xu_3d(av) )
272	CALL handle_netcdf_error( 'netcdf', 359 )
273
274	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_xu_3d(av), 'units', &
275	'meters' )
276	CALL handle_netcdf_error( 'netcdf', 360 )
277
278	!
279	!-- Define y-axis (for scalar position)
280	nc_stat = NF90_DEF_DIM( id_set_3d(av), 'y', ny+2, id_dim_y_3d(av) )
281	CALL handle_netcdf_error( 'netcdf', 76 )
282
283	nc_stat = NF90_DEF_VAR( id_set_3d(av), 'y', NF90_DOUBLE, &
284	id_dim_y_3d(av), id_var_y_3d(av) )
285	CALL handle_netcdf_error( 'netcdf', 77 )
286
287	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_y_3d(av), 'units', &
288	'meters' )
289	CALL handle_netcdf_error( 'netcdf', 78 )
290
291	!
292	!-- Define y-axis (for v position)
293	nc_stat = NF90_DEF_DIM( id_set_3d(av), 'yv', ny+2, id_dim_yv_3d(av) )
294	CALL handle_netcdf_error( 'netcdf', 361 )
295
296	nc_stat = NF90_DEF_VAR( id_set_3d(av), 'yv', NF90_DOUBLE, &
297	id_dim_yv_3d(av), id_var_yv_3d(av) )
298	CALL handle_netcdf_error( 'netcdf', 362 )
299
300	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_yv_3d(av), 'units', &
301	'meters' )
302	CALL handle_netcdf_error( 'netcdf', 363 )
303
304	!
305	!-- In case of non-flat topography define 2d-arrays containing the height
306	!-- informations
307	IF ( TRIM( topography ) /= 'flat' ) THEN
308	!
309	!-- Define zusi = zu(nzb_s_inner)
310	nc_stat = NF90_DEF_VAR( id_set_3d(av), 'zusi', NF90_DOUBLE, &
311	(/ id_dim_x_3d(av), id_dim_y_3d(av) /), &
312	id_var_zusi_3d(av) )
313	CALL handle_netcdf_error( 'netcdf', 413 )
314
315	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_zusi_3d(av), &
316	'units', 'meters' )
317	CALL handle_netcdf_error( 'netcdf', 414 )
318
319	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_zusi_3d(av), &
320	'long_name', 'zu(nzb_s_inner)' )
321	CALL handle_netcdf_error( 'netcdf', 415 )
322
323	!
324	!-- Define zwwi = zw(nzb_w_inner)
325	nc_stat = NF90_DEF_VAR( id_set_3d(av), 'zwwi', NF90_DOUBLE, &
326	(/ id_dim_x_3d(av), id_dim_y_3d(av) /), &
327	id_var_zwwi_3d(av) )
328	CALL handle_netcdf_error( 'netcdf', 416 )
329
330	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_zwwi_3d(av), &
331	'units', 'meters' )
332	CALL handle_netcdf_error( 'netcdf', 417 )
333
334	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_zwwi_3d(av), &
335	'long_name', 'zw(nzb_w_inner)' )
336	CALL handle_netcdf_error( 'netcdf', 418 )
337
338	ENDIF
339
340
341	!
342	!-- Define the variables
343	var_list = ';'
344	i = 1
345
346	DO WHILE ( do3d(av,i)(1:1) /= ' ' )
347
348	!
349	!-- Check for the grid
350	found = .TRUE.
351	SELECT CASE ( do3d(av,i) )
352	!
353	!-- Most variables are defined on the scalar grid
354	CASE ( 'e', 'p', 'pc', 'pr', 'pt', 'q', 'ql', 'ql_c', 'ql_v', &
355	'ql_vp', 'qv', 'rho', 's', 'sa', 'vpt' )
356
357	grid_x = 'x'
358	grid_y = 'y'
359	grid_z = 'zu'
360	!
361	!-- u grid
362	CASE ( 'u' )
363
364	grid_x = 'xu'
365	grid_y = 'y'
366	grid_z = 'zu'
367	!
368	!-- v grid
369	CASE ( 'v' )
370
371	grid_x = 'x'
372	grid_y = 'yv'
373	grid_z = 'zu'
374	!
375	!-- w grid
376	CASE ( 'w' )
377
378	grid_x = 'x'
379	grid_y = 'y'
380	grid_z = 'zw'
381
382	CASE DEFAULT
383	!
384	!-- Check for user-defined quantities
385	CALL user_define_netcdf_grid( do3d(av,i), found, grid_x, &
386	grid_y, grid_z )
387
388	END SELECT
389
390	!
391	!-- Select the respective dimension ids
392	IF ( grid_x == 'x' ) THEN
393	id_x = id_dim_x_3d(av)
394	ELSEIF ( grid_x == 'xu' ) THEN
395	id_x = id_dim_xu_3d(av)
396	ENDIF
397
398	IF ( grid_y == 'y' ) THEN
399	id_y = id_dim_y_3d(av)
400	ELSEIF ( grid_y == 'yv' ) THEN
401	id_y = id_dim_yv_3d(av)
402	ENDIF
403
404	IF ( grid_z == 'zu' ) THEN
405	id_z = id_dim_zu_3d(av)
406	ELSEIF ( grid_z == 'zw' ) THEN
407	id_z = id_dim_zw_3d(av)
408	ENDIF
409
410	!
411	!-- Define the grid
412	nc_stat = NF90_DEF_VAR( id_set_3d(av), do3d(av,i), &
413	nc_precision(4), &
414	(/ id_x, id_y, id_z, id_dim_time_3d(av) /), &
415	id_var_do3d(av,i) )
416
417	IF ( .NOT. found ) THEN
418	WRITE ( message_string, * ) 'no grid defined for', &
419	' variable ', TRIM( do3d(av,i) )
420	CALL message( 'define_netcdf_header', 'PA0244', 0, 1, 0, 6, 0 )
421	ENDIF
422
423	var_list = TRIM( var_list ) // TRIM( do3d(av,i) ) // ';'
424
425	CALL handle_netcdf_error( 'netcdf', 79 )
426	!
427	!-- Store the 'real' name of the variable (with *, for example)
428	!-- in the long_name attribute. This is evaluated by Ferret,
429	!-- for example.
430	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_do3d(av,i), &
431	'long_name', do3d(av,i) )
432	CALL handle_netcdf_error( 'netcdf', 80 )
433	!
434	!-- Define the variable's unit
435	nc_stat = NF90_PUT_ATT( id_set_3d(av), id_var_do3d(av,i), &
436	'units', TRIM( do3d_unit(av,i) ) )
437	CALL handle_netcdf_error( 'netcdf', 357 )
438
439	i = i + 1
440
441	ENDDO
442
443	!
444	!-- No arrays to output
445	IF ( i == 1 ) RETURN
446
447	!
448	!-- Write the list of variables as global attribute (this is used by
449	!-- restart runs and by combine_plot_fields)
450	nc_stat = NF90_PUT_ATT( id_set_3d(av), NF90_GLOBAL, 'VAR_LIST', &
451	var_list )
452	CALL handle_netcdf_error( 'netcdf', 81 )
453
454	!
455	!-- Leave NetCDF define mode
456	nc_stat = NF90_ENDDEF( id_set_3d(av) )
457	CALL handle_netcdf_error( 'netcdf', 82 )
458
459	!
460	!-- Write data for x (shifted by +dx/2) and xu axis
461	ALLOCATE( netcdf_data(0:nx+1) )
462
463	DO i = 0, nx+1
464	netcdf_data(i) = ( i + 0.5 ) * dx
465	ENDDO
466
467	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_x_3d(av), netcdf_data, &
468	start = (/ 1 /), count = (/ nx+2 /) )
469	CALL handle_netcdf_error( 'netcdf', 83 )
470
471	DO i = 0, nx+1
472	netcdf_data(i) = i * dx
473	ENDDO
474
475	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_xu_3d(av), &
476	netcdf_data, start = (/ 1 /), &
477	count = (/ nx+2 /) )
478	CALL handle_netcdf_error( 'netcdf', 385 )
479
480	DEALLOCATE( netcdf_data )
481
482	!
483	!-- Write data for y (shifted by +dy/2) and yv axis
484	ALLOCATE( netcdf_data(0:ny+1) )
485
486	DO i = 0, ny+1
487	netcdf_data(i) = ( i + 0.5 ) * dy
488	ENDDO
489
490	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_y_3d(av), netcdf_data, &
491	start = (/ 1 /), count = (/ ny+2 /))
492	CALL handle_netcdf_error( 'netcdf', 84 )
493
494	DO i = 0, ny+1
495	netcdf_data(i) = i * dy
496	ENDDO
497
498	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_yv_3d(av), &
499	netcdf_data, start = (/ 1 /), &
500	count = (/ ny+2 /))
501	CALL handle_netcdf_error( 'netcdf', 387 )
502
503	DEALLOCATE( netcdf_data )
504
505	!
506	!-- Write zu and zw data (vertical axes)
507	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_zu_3d(av), &
508	zu(nzb:nz_do3d), start = (/ 1 /), &
509	count = (/ nz_do3d-nzb+1 /) )
510	CALL handle_netcdf_error( 'netcdf', 85 )
511
512
513	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_zw_3d(av), &
514	zw(nzb:nz_do3d), start = (/ 1 /), &
515	count = (/ nz_do3d-nzb+1 /) )
516	CALL handle_netcdf_error( 'netcdf', 86 )
517
518
519	!
520	!-- In case of non-flat topography write height information
521	IF ( TRIM( topography ) /= 'flat' ) THEN
522
523	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_zusi_3d(av), &
524	zu_s_inner(0:nx+1,0:ny+1), &
525	start = (/ 1, 1 /), &
526	count = (/ nx+2, ny+2 /) )
527	CALL handle_netcdf_error( 'netcdf', 419 )
528
529	nc_stat = NF90_PUT_VAR( id_set_3d(av), id_var_zwwi_3d(av), &
530	zw_w_inner(0:nx+1,0:ny+1), &
531	start = (/ 1, 1 /), &
532	count = (/ nx+2, ny+2 /) )
533	CALL handle_netcdf_error( 'netcdf', 420 )
534
535	ENDIF
536
537	CASE ( '3d_ext' )
538
539	!
540	!-- Get the list of variables and compare with the actual run.
541	!-- First var_list_old has to be reset, since GET_ATT does not assign
542	!-- trailing blanks.
543	var_list_old = ' '
544	nc_stat = NF90_GET_ATT( id_set_3d(av), NF90_GLOBAL, 'VAR_LIST', &
545	var_list_old )
546	CALL handle_netcdf_error( 'netcdf', 87 )
547
548	var_list = ';'
549	i = 1
550	DO WHILE ( do3d(av,i)(1:1) /= ' ' )
551	var_list = TRIM(var_list) // TRIM( do3d(av,i) ) // ';'
552	i = i + 1
553	ENDDO
554
555	IF ( av == 0 ) THEN
556	var = '(3d)'
557	ELSE
558	var = '(3d_av)'
559	ENDIF
560
561	IF ( TRIM( var_list ) /= TRIM( var_list_old ) ) THEN
562	message_string = 'NetCDF file for volume data ' // &
563	TRIM( var ) // ' from previuos run found,' // &
564	'&but this file cannot be extended due to' // &
565	' variable mismatch.' // &
566	'&New file is created instead.'
567	CALL message( 'define_netcdf_header', 'PA0245', 0, 1, 0, 6, 0 )
568	extend = .FALSE.
569	RETURN
570	ENDIF
571
572	!
573	!-- Get and compare the number of vertical gridpoints
574	nc_stat = NF90_INQ_VARID( id_set_3d(av), 'zu_3d', id_var_zu_3d(av) )
575	CALL handle_netcdf_error( 'netcdf', 88 )
576
577	nc_stat = NF90_INQUIRE_VARIABLE( id_set_3d(av), id_var_zu_3d(av), &
578	dimids = id_dim_zu_3d_old )
579	CALL handle_netcdf_error( 'netcdf', 89 )
580	id_dim_zu_3d(av) = id_dim_zu_3d_old(1)
581
582	nc_stat = NF90_INQUIRE_DIMENSION( id_set_3d(av), id_dim_zu_3d(av), &
583	len = nz_old )
584	CALL handle_netcdf_error( 'netcdf', 90 )
585
586	IF ( nz_do3d-nzb+1 /= nz_old ) THEN
587	message_string = 'NetCDF file for volume data ' // &
588	TRIM( var ) // ' from previuos run found,' // &
589	'&but this file cannot be extended due to' // &
590	' mismatch in number of' // &
591	'&vertical grid points (nz_do3d).' // &
592	'&New file is created instead.'
593	CALL message( 'define_netcdf_header', 'PA0246', 0, 1, 0, 6, 0 )
594	extend = .FALSE.
595	RETURN
596	ENDIF
597
598	!
599	!-- Get the id of the time coordinate (unlimited coordinate) and its
600	!-- last index on the file. The next time level is pl3d..count+1.
601	!-- The current time must be larger than the last output time
602	!-- on the file.
603	nc_stat = NF90_INQ_VARID( id_set_3d(av), 'time', id_var_time_3d(av) )
604	CALL handle_netcdf_error( 'netcdf', 91 )
605
606	nc_stat = NF90_INQUIRE_VARIABLE( id_set_3d(av), id_var_time_3d(av), &
607	dimids = id_dim_time_old )
608	CALL handle_netcdf_error( 'netcdf', 92 )
609
610	id_dim_time_3d(av) = id_dim_time_old(1)
611
612	nc_stat = NF90_INQUIRE_DIMENSION( id_set_3d(av), id_dim_time_3d(av), &
613	len = do3d_time_count(av) )
614	CALL handle_netcdf_error( 'netcdf', 93 )
615
616	nc_stat = NF90_GET_VAR( id_set_3d(av), id_var_time_3d(av), &
617	last_time_coordinate, &
618	start = (/ do3d_time_count(av) /), &
619	count = (/ 1 /) )
620	CALL handle_netcdf_error( 'netcdf', 94 )
621
622	IF ( last_time_coordinate(1) >= simulated_time ) THEN
623	message_string = 'NetCDF file for volume data ' // &
624	TRIM( var ) // ' from previuos run found,' // &
625	'&but this file cannot be extended becaus' // &
626	'e the current output time' // &
627	'&is less or equal than the last output t' // &
628	'ime on this file.' // &
629	'&New file is created instead.'
630	CALL message( 'define_netcdf_header', 'PA0247', 0, 1, 0, 6, 0 )
631	do3d_time_count(av) = 0
632	extend = .FALSE.
633	RETURN
634	ENDIF
635
636	!
637	!-- Dataset seems to be extendable.
638	!-- Now get the variable ids.
639	i = 1
640	DO WHILE ( do3d(av,i)(1:1) /= ' ' )
641	nc_stat = NF90_INQ_VARID( id_set_3d(av), TRIM( do3d(av,i) ), &
642	id_var_do3d(av,i) )
643	CALL handle_netcdf_error( 'netcdf', 95 )
644	i = i + 1
645	ENDDO
646
647	!
648	!-- Change the titel attribute on file
649	nc_stat = NF90_PUT_ATT( id_set_3d(av), NF90_GLOBAL, 'title', &
650	TRIM( run_description_header ) )
651	CALL handle_netcdf_error( 'netcdf', 96 )
652	message_string = 'NetCDF file for volume data ' // &
653	TRIM( var ) // ' from previous run found.' // &
654	'&This file will be extended.'
655	CALL message( 'define_netcdf_header', 'PA0248', 0, 0, 0, 6, 0 )
656
657	CASE ( 'xy_new' )
658
659	!
660	!-- Define some global attributes of the dataset
661	nc_stat = NF90_PUT_ATT( id_set_xy(av), NF90_GLOBAL, 'Conventions', &
662	'COARDS' )
663	CALL handle_netcdf_error( 'netcdf', 97 )
664
665	IF ( av == 0 ) THEN
666	time_average_text = ' '
667	ELSE
668	WRITE (time_average_text, '('', '',F7.1,'' s average'')') &
669	averaging_interval
670	ENDIF
671	nc_stat = NF90_PUT_ATT( id_set_xy(av), NF90_GLOBAL, 'title', &
672	TRIM( run_description_header ) // &
673	TRIM( time_average_text ) )
674	CALL handle_netcdf_error( 'netcdf', 98 )
675	IF ( av == 1 ) THEN
676	WRITE ( time_average_text,'(F7.1,'' s avg'')' ) averaging_interval
677	nc_stat = NF90_PUT_ATT( id_set_xy(av), NF90_GLOBAL, 'time_avg', &
678	TRIM( time_average_text ) )
679	CALL handle_netcdf_error( 'netcdf', 98 )
680	ENDIF
681
682	!
683	!-- Define time coordinate for xy sections (unlimited dimension)
684	nc_stat = NF90_DEF_DIM( id_set_xy(av), 'time', NF90_UNLIMITED, &
685	id_dim_time_xy(av) )
686	CALL handle_netcdf_error( 'netcdf', 99 )
687
688	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'time', NF90_DOUBLE, &
689	id_dim_time_xy(av), id_var_time_xy(av) )
690	CALL handle_netcdf_error( 'netcdf', 100 )
691
692	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_time_xy(av), 'units', &
693	'seconds')
694	CALL handle_netcdf_error( 'netcdf', 101 )
695
696	!
697	!-- Define the spatial dimensions and coordinates for xy-sections.
698	!-- First, determine the number of horizontal sections to be written.
699	IF ( section(1,1) == -9999 ) THEN
700	RETURN
701	ELSE
702	ns = 1
703	DO WHILE ( section(ns,1) /= -9999 .AND. ns <= 100 )
704	ns = ns + 1
705	ENDDO
706	ns = ns - 1
707	ENDIF
708
709	!
710	!-- Define vertical coordinate grid (zu grid)
711	nc_stat = NF90_DEF_DIM( id_set_xy(av), 'zu_xy', ns, id_dim_zu_xy(av) )
712	CALL handle_netcdf_error( 'netcdf', 102 )
713
714	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'zu_xy', NF90_DOUBLE, &
715	id_dim_zu_xy(av), id_var_zu_xy(av) )
716	CALL handle_netcdf_error( 'netcdf', 103 )
717
718	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_zu_xy(av), 'units', &
719	'meters' )
720	CALL handle_netcdf_error( 'netcdf', 104 )
721
722	!
723	!-- Define vertical coordinate grid (zw grid)
724	nc_stat = NF90_DEF_DIM( id_set_xy(av), 'zw_xy', ns, id_dim_zw_xy(av) )
725	CALL handle_netcdf_error( 'netcdf', 105 )
726
727	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'zw_xy', NF90_DOUBLE, &
728	id_dim_zw_xy(av), id_var_zw_xy(av) )
729	CALL handle_netcdf_error( 'netcdf', 106 )
730
731	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_zw_xy(av), 'units', &
732	'meters' )
733	CALL handle_netcdf_error( 'netcdf', 107 )
734
735	!
736	!-- Define a pseudo vertical coordinate grid for the surface variables
737	!-- u* and t* to store their height level
738	nc_stat = NF90_DEF_DIM( id_set_xy(av), 'zu1_xy', 1, &
739	id_dim_zu1_xy(av) )
740	CALL handle_netcdf_error( 'netcdf', 108 )
741
742	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'zu1_xy', NF90_DOUBLE, &
743	id_dim_zu1_xy(av), id_var_zu1_xy(av) )
744	CALL handle_netcdf_error( 'netcdf', 109 )
745
746	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_zu1_xy(av), 'units', &
747	'meters' )
748	CALL handle_netcdf_error( 'netcdf', 110 )
749
750	!
751	!-- Define a variable to store the layer indices of the horizontal cross
752	!-- sections, too
753	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'ind_z_xy', NF90_DOUBLE, &
754	id_dim_zu_xy(av), id_var_ind_z_xy(av) )
755	CALL handle_netcdf_error( 'netcdf', 111 )
756
757	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_ind_z_xy(av), 'units', &
758	'gridpoints')
759	CALL handle_netcdf_error( 'netcdf', 112 )
760
761	!
762	!-- Define x-axis (for scalar position)
763	nc_stat = NF90_DEF_DIM( id_set_xy(av), 'x', nx+2, id_dim_x_xy(av) )
764	CALL handle_netcdf_error( 'netcdf', 113 )
765
766	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'x', NF90_DOUBLE, &
767	id_dim_x_xy(av), id_var_x_xy(av) )
768	CALL handle_netcdf_error( 'netcdf', 114 )
769
770
771	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_x_xy(av), 'units', &
772	'meters' )
773	CALL handle_netcdf_error( 'netcdf', 115 )
774
775	!
776	!-- Define x-axis (for u position)
777	nc_stat = NF90_DEF_DIM( id_set_xy(av), 'xu', nx+2, id_dim_xu_xy(av) )
778	CALL handle_netcdf_error( 'netcdf', 388 )
779
780	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'xu', NF90_DOUBLE, &
781	id_dim_xu_xy(av), id_var_xu_xy(av) )
782	CALL handle_netcdf_error( 'netcdf', 389 )
783
784	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_xu_xy(av), 'units', &
785	'meters' )
786	CALL handle_netcdf_error( 'netcdf', 390 )
787
788	!
789	!-- Define y-axis (for scalar position)
790	nc_stat = NF90_DEF_DIM( id_set_xy(av), 'y', ny+2, id_dim_y_xy(av) )
791	CALL handle_netcdf_error( 'netcdf', 116 )
792
793	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'y', NF90_DOUBLE, &
794	id_dim_y_xy(av), id_var_y_xy(av) )
795	CALL handle_netcdf_error( 'netcdf', 117 )
796
797	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_y_xy(av), 'units', &
798	'meters' )
799	CALL handle_netcdf_error( 'netcdf', 118 )
800
801	!
802	!-- Define y-axis (for scalar position)
803	nc_stat = NF90_DEF_DIM( id_set_xy(av), 'yv', ny+2, id_dim_yv_xy(av) )
804	CALL handle_netcdf_error( 'netcdf', 364 )
805
806	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'yv', NF90_DOUBLE, &
807	id_dim_yv_xy(av), id_var_yv_xy(av) )
808	CALL handle_netcdf_error( 'netcdf', 365 )
809
810	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_yv_xy(av), 'units', &
811	'meters' )
812	CALL handle_netcdf_error( 'netcdf', 366 )
813
814	!
815	!-- In case of non-flat topography define 2d-arrays containing the height
816	!-- informations
817	IF ( TRIM( topography ) /= 'flat' ) THEN
818	!
819	!-- Define zusi = zu(nzb_s_inner)
820	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'zusi', NF90_DOUBLE, &
821	(/ id_dim_x_xy(av), id_dim_y_xy(av) /), &
822	id_var_zusi_xy(av) )
823	CALL handle_netcdf_error( 'netcdf', 421 )
824
825	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_zusi_xy(av), &
826	'units', 'meters' )
827	CALL handle_netcdf_error( 'netcdf', 422 )
828
829	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_zusi_xy(av), &
830	'long_name', 'zu(nzb_s_inner)' )
831	CALL handle_netcdf_error( 'netcdf', 423 )
832
833	!
834	!-- Define zwwi = zw(nzb_w_inner)
835	nc_stat = NF90_DEF_VAR( id_set_xy(av), 'zwwi', NF90_DOUBLE, &
836	(/ id_dim_x_xy(av), id_dim_y_xy(av) /), &
837	id_var_zwwi_xy(av) )
838	CALL handle_netcdf_error( 'netcdf', 424 )
839
840	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_zwwi_xy(av), &
841	'units', 'meters' )
842	CALL handle_netcdf_error( 'netcdf', 425 )
843
844	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_zwwi_xy(av), &
845	'long_name', 'zw(nzb_w_inner)' )
846	CALL handle_netcdf_error( 'netcdf', 426 )
847
848	ENDIF
849
850
851	!
852	!-- Define the variables
853	var_list = ';'
854	i = 1
855
856	DO WHILE ( do2d(av,i)(1:1) /= ' ' )
857
858	IF ( INDEX( do2d(av,i), 'xy' ) /= 0 ) THEN
859	!
860	!-- If there is a star in the variable name (u* or t*), it is a
861	!-- surface variable. Define it with id_dim_zu1_xy.
862	IF ( INDEX( do2d(av,i), '*' ) /= 0 ) THEN
863	!
864	!-- First, remove those characters not allowed by NetCDF
865	netcdf_var_name = do2d(av,i)
866	CALL clean_netcdf_varname( netcdf_var_name )
867
868	nc_stat = NF90_DEF_VAR( id_set_xy(av), netcdf_var_name, &
869	nc_precision(1), &
870	(/ id_dim_x_xy(av), id_dim_y_xy(av),&
871	id_dim_zu1_xy(av), &
872	id_dim_time_xy(av) /), &
873	id_var_do2d(av,i) )
874
875	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // ';'
876
877	ELSE
878
879	!
880	!-- Check for the grid
881	found = .TRUE.
882	SELECT CASE ( do2d(av,i) )
883	!
884	!-- Most variables are defined on the zu grid
885	CASE ( 'e_xy', 'p_xy', 'pc_xy', 'pr_xy', 'pt_xy', 'q_xy',&
886	'ql_xy', 'ql_c_xy', 'ql_v_xy', 'ql_vp_xy', &
887	'qv_xy', 'rho_xy', 's_xy', 'sa_xy', 'vpt_xy' )
888
889	grid_x = 'x'
890	grid_y = 'y'
891	grid_z = 'zu'
892	!
893	!-- u grid
894	CASE ( 'u_xy' )
895
896	grid_x = 'xu'
897	grid_y = 'y'
898	grid_z = 'zu'
899	!
900	!-- v grid
901	CASE ( 'v_xy' )
902
903	grid_x = 'x'
904	grid_y = 'yv'
905	grid_z = 'zu'
906	!
907	!-- w grid
908	CASE ( 'w_xy' )
909
910	grid_x = 'x'
911	grid_y = 'y'
912	grid_z = 'zw'
913
914	CASE DEFAULT
915	!
916	!-- Check for user-defined quantities
917	CALL user_define_netcdf_grid( do2d(av,i), found, &
918	grid_x, grid_y, grid_z )
919
920	END SELECT
921
922	!
923	!-- Select the respective dimension ids
924	IF ( grid_x == 'x' ) THEN
925	id_x = id_dim_x_xy(av)
926	ELSEIF ( grid_x == 'xu' ) THEN
927	id_x = id_dim_xu_xy(av)
928	ENDIF
929
930	IF ( grid_y == 'y' ) THEN
931	id_y = id_dim_y_xy(av)
932	ELSEIF ( grid_y == 'yv' ) THEN
933	id_y = id_dim_yv_xy(av)
934	ENDIF
935
936	IF ( grid_z == 'zu' ) THEN
937	id_z = id_dim_zu_xy(av)
938	ELSEIF ( grid_z == 'zw' ) THEN
939	id_z = id_dim_zw_xy(av)
940	ENDIF
941
942	!
943	!-- Define the grid
944	nc_stat = NF90_DEF_VAR( id_set_xy(av), do2d(av,i), &
945	nc_precision(1), &
946	(/ id_x, id_y, id_z, id_dim_time_xy(av) /), &
947	id_var_do2d(av,i) )
948
949	IF ( .NOT. found ) THEN
950	WRITE ( message_string, * ) 'no grid defined for', &
951	' variable ', TRIM( do2d(av,i) )
952	CALL message( 'define_netcdf_header', 'PA0244',&
953	0, 1, 0, 6, 0 )
954	ENDIF
955
956	var_list = TRIM( var_list ) // TRIM( do2d(av,i) ) // ';'
957
958	ENDIF
959
960	CALL handle_netcdf_error( 'netcdf', 119 )
961	!
962	!-- Store the 'real' name of the variable (with *, for example)
963	!-- in the long_name attribute. This is evaluated by Ferret,
964	!-- for example.
965	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_do2d(av,i), &
966	'long_name', do2d(av,i) )
967	CALL handle_netcdf_error( 'netcdf', 120 )
968	!
969	!-- Define the variable's unit
970	nc_stat = NF90_PUT_ATT( id_set_xy(av), id_var_do2d(av,i), &
971	'units', TRIM( do2d_unit(av,i) ) )
972	CALL handle_netcdf_error( 'netcdf', 354 )
973	ENDIF
974
975	i = i + 1
976
977	ENDDO
978
979	!
980	!-- No arrays to output. Close the netcdf file and return.
981	IF ( i == 1 ) RETURN
982
983	!
984	!-- Write the list of variables as global attribute (this is used by
985	!-- restart runs and by combine_plot_fields)
986	nc_stat = NF90_PUT_ATT( id_set_xy(av), NF90_GLOBAL, 'VAR_LIST', &
987	var_list )
988	CALL handle_netcdf_error( 'netcdf', 121 )
989
990	!
991	!-- Leave NetCDF define mode
992	nc_stat = NF90_ENDDEF( id_set_xy(av) )
993	CALL handle_netcdf_error( 'netcdf', 122 )
994
995	!
996	!-- Write axis data: z_xy, x, y
997	ALLOCATE( netcdf_data(1:ns) )
998
999	!
1000	!-- Write zu data
1001	DO i = 1, ns
1002	IF( section(i,1) == -1 ) THEN
1003	netcdf_data(i) = -1.0 ! section averaged along z
1004	ELSE
1005	netcdf_data(i) = zu( section(i,1) )
1006	ENDIF
1007	ENDDO
1008	nc_stat = NF90_PUT_VAR( id_set_xy(av), id_var_zu_xy(av), &
1009	netcdf_data, start = (/ 1 /), &
1010	count = (/ ns /) )
1011	CALL handle_netcdf_error( 'netcdf', 123 )
1012
1013	!
1014	!-- Write zw data
1015	DO i = 1, ns
1016	IF( section(i,1) == -1 ) THEN
1017	netcdf_data(i) = -1.0 ! section averaged along z
1018	ELSE
1019	netcdf_data(i) = zw( section(i,1) )
1020	ENDIF
1021	ENDDO
1022	nc_stat = NF90_PUT_VAR( id_set_xy(av), id_var_zw_xy(av), &
1023	netcdf_data, start = (/ 1 /), &
1024	count = (/ ns /) )
1025	CALL handle_netcdf_error( 'netcdf', 124 )
1026
1027	!
1028	!-- Write gridpoint number data
1029	netcdf_data(1:ns) = section(1:ns,1)
1030	nc_stat = NF90_PUT_VAR( id_set_xy(av), id_var_ind_z_xy(av), &
1031	netcdf_data, start = (/ 1 /), &
1032	count = (/ ns /) )
1033	CALL handle_netcdf_error( 'netcdf', 125 )
1034
1035	DEALLOCATE( netcdf_data )
1036
1037	!
1038	!-- Write the cross section height u, t
1039	nc_stat = NF90_PUT_VAR( id_set_xy(av), id_var_zu1_xy(av), &
1040	(/ zu(nzb+1) /), start = (/ 1 /), &
1041	count = (/ 1 /) )
1042	CALL handle_netcdf_error( 'netcdf', 126 )
1043
1044	!
1045	!-- Write data for x (shifted by +dx/2) and xu axis
1046	ALLOCATE( netcdf_data(0:nx+1) )
1047
1048	DO i = 0, nx+1
1049	netcdf_data(i) = ( i + 0.5 ) * dx
1050	ENDDO
1051
1052	nc_stat = NF90_PUT_VAR( id_set_xy(av), id_var_x_xy(av), netcdf_data, &
1053	start = (/ 1 /), count = (/ nx+2 /) )
1054	CALL handle_netcdf_error( 'netcdf', 127 )
1055
1056	DO i = 0, nx+1
1057	netcdf_data(i) = i * dx
1058	ENDDO
1059
1060	nc_stat = NF90_PUT_VAR( id_set_xy(av), id_var_xu_xy(av), &
1061	netcdf_data, start = (/ 1 /), &
1062	count = (/ nx+2 /) )
1063	CALL handle_netcdf_error( 'netcdf', 367 )
1064
1065	DEALLOCATE( netcdf_data )
1066
1067	!
1068	!-- Write data for y (shifted by +dy/2) and yv axis
1069	ALLOCATE( netcdf_data(0:ny+1) )
1070
1071	DO i = 0, ny+1
1072	netcdf_data(i) = ( i + 0.5 ) * dy
1073	ENDDO
1074
1075	nc_stat = NF90_PUT_VAR( id_set_xy(av), id_var_y_xy(av), netcdf_data, &
1076	start = (/ 1 /), count = (/ ny+2 /))
1077	CALL handle_netcdf_error( 'netcdf', 128 )
1078
1079	DO i = 0, ny+1
1080	netcdf_data(i) = i * dy
1081	ENDDO
1082
1083	nc_stat = NF90_PUT_VAR( id_set_xy(av), id_var_yv_xy(av), &
1084	netcdf_data, start = (/ 1 /), &
1085	count = (/ ny+2 /))
1086	CALL handle_netcdf_error( 'netcdf', 368 )
1087
1088	DEALLOCATE( netcdf_data )
1089
1090	!
1091	!-- In case of non-flat topography write height information
1092	IF ( TRIM( topography ) /= 'flat' ) THEN
1093
1094	nc_stat = NF90_PUT_VAR( id_set_xy(av), id_var_zusi_xy(av), &
1095	zu_s_inner(0:nx+1,0:ny+1), &
1096	start = (/ 1, 1 /), &
1097	count = (/ nx+2, ny+2 /) )
1098	CALL handle_netcdf_error( 'netcdf', 427 )
1099
1100	nc_stat = NF90_PUT_VAR( id_set_xy(av), id_var_zwwi_xy(av), &
1101	zw_w_inner(0:nx+1,0:ny+1), &
1102	start = (/ 1, 1 /), &
1103	count = (/ nx+2, ny+2 /) )
1104	CALL handle_netcdf_error( 'netcdf', 428 )
1105
1106	ENDIF
1107
1108
1109	CASE ( 'xy_ext' )
1110
1111	!
1112	!-- Get the list of variables and compare with the actual run.
1113	!-- First var_list_old has to be reset, since GET_ATT does not assign
1114	!-- trailing blanks.
1115	var_list_old = ' '
1116	nc_stat = NF90_GET_ATT( id_set_xy(av), NF90_GLOBAL, 'VAR_LIST', &
1117	var_list_old )
1118	CALL handle_netcdf_error( 'netcdf', 129 )
1119
1120	var_list = ';'
1121	i = 1
1122	DO WHILE ( do2d(av,i)(1:1) /= ' ' )
1123	IF ( INDEX( do2d(av,i), 'xy' ) /= 0 ) THEN
1124	netcdf_var_name = do2d(av,i)
1125	CALL clean_netcdf_varname( netcdf_var_name )
1126	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // ';'
1127	ENDIF
1128	i = i + 1
1129	ENDDO
1130
1131	IF ( av == 0 ) THEN
1132	var = '(xy)'
1133	ELSE
1134	var = '(xy_av)'
1135	ENDIF
1136
1137	IF ( TRIM( var_list ) /= TRIM( var_list_old ) ) THEN
1138	message_string = 'NetCDF file for cross-sections ' // &
1139	TRIM( var ) // ' from previuos run found,' // &
1140	'& but this file cannot be extended due to' // &
1141	' variable mismatch.' // &
1142	'&New file is created instead.'
1143	CALL message( 'define_netcdf_header', 'PA0249', 0, 1, 0, 6, 0 )
1144	extend = .FALSE.
1145	RETURN
1146	ENDIF
1147
1148	!
1149	!-- Calculate the number of current sections
1150	ns = 1
1151	DO WHILE ( section(ns,1) /= -9999 .AND. ns <= 100 )
1152	ns = ns + 1
1153	ENDDO
1154	ns = ns - 1
1155
1156	!
1157	!-- Get and compare the number of horizontal cross sections
1158	nc_stat = NF90_INQ_VARID( id_set_xy(av), 'zu_xy', id_var_zu_xy(av) )
1159	CALL handle_netcdf_error( 'netcdf', 130 )
1160
1161	nc_stat = NF90_INQUIRE_VARIABLE( id_set_xy(av), id_var_zu_xy(av), &
1162	dimids = id_dim_zu_xy_old )
1163	CALL handle_netcdf_error( 'netcdf', 131 )
1164	id_dim_zu_xy(av) = id_dim_zu_xy_old(1)
1165
1166	nc_stat = NF90_INQUIRE_DIMENSION( id_set_xy(av), id_dim_zu_xy(av), &
1167	len = ns_old )
1168	CALL handle_netcdf_error( 'netcdf', 132 )
1169
1170	IF ( ns /= ns_old ) THEN
1171	message_string = 'NetCDF file for cross-sections ' // &
1172	TRIM( var ) // ' from previuos run found,' // &
1173	'&but this file cannot be extended due to' // &
1174	' mismatch in number of' // &
1175	'&cross sections.' // &
1176	'&New file is created instead.'
1177	CALL message( 'define_netcdf_header', 'PA0250', 0, 1, 0, 6, 0 )
1178	extend = .FALSE.
1179	RETURN
1180	ENDIF
1181
1182	!
1183	!-- Get and compare the heights of the cross sections
1184	ALLOCATE( netcdf_data(1:ns_old) )
1185
1186	nc_stat = NF90_GET_VAR( id_set_xy(av), id_var_zu_xy(av), netcdf_data )
1187	CALL handle_netcdf_error( 'netcdf', 133 )
1188
1189	DO i = 1, ns
1190	IF ( section(i,1) /= -1 ) THEN
1191	IF ( zu(section(i,1)) /= netcdf_data(i) ) THEN
1192	message_string = 'NetCDF file for cross-sections ' // &
1193	TRIM( var ) // ' from previuos run found,' // &
1194	'&but this file cannot be extended' // &
1195	' due to mismatch in cross' // &
1196	'&section levels.' // &
1197	'&New file is created instead.'
1198	CALL message( 'define_netcdf_header', 'PA0251', &
1199	0, 1, 0, 6, 0 )
1200	extend = .FALSE.
1201	RETURN
1202	ENDIF
1203	ELSE
1204	IF ( -1.0 /= netcdf_data(i) ) THEN
1205	message_string = 'NetCDF file for cross-sections ' // &
1206	TRIM( var ) // ' from previuos run found,' // &
1207	'&but this file cannot be extended' // &
1208	' due to mismatch in cross' // &
1209	'&section levels.' // &
1210	'&New file is created instead.'
1211	CALL message( 'define_netcdf_header', 'PA0251',&
1212	0, 1, 0, 6, 0 )
1213	extend = .FALSE.
1214	RETURN
1215	ENDIF
1216	ENDIF
1217	ENDDO
1218
1219	DEALLOCATE( netcdf_data )
1220
1221	!
1222	!-- Get the id of the time coordinate (unlimited coordinate) and its
1223	!-- last index on the file. The next time level is do2d..count+1.
1224	!-- The current time must be larger than the last output time
1225	!-- on the file.
1226	nc_stat = NF90_INQ_VARID( id_set_xy(av), 'time', id_var_time_xy(av) )
1227	CALL handle_netcdf_error( 'netcdf', 134 )
1228
1229	nc_stat = NF90_INQUIRE_VARIABLE( id_set_xy(av), id_var_time_xy(av), &
1230	dimids = id_dim_time_old )
1231	CALL handle_netcdf_error( 'netcdf', 135 )
1232	id_dim_time_xy(av) = id_dim_time_old(1)
1233
1234	nc_stat = NF90_INQUIRE_DIMENSION( id_set_xy(av), id_dim_time_xy(av), &
1235	len = do2d_xy_time_count(av) )
1236	CALL handle_netcdf_error( 'netcdf', 136 )
1237
1238	nc_stat = NF90_GET_VAR( id_set_xy(av), id_var_time_xy(av), &
1239	last_time_coordinate, &
1240	start = (/ do2d_xy_time_count(av) /), &
1241	count = (/ 1 /) )
1242	CALL handle_netcdf_error( 'netcdf', 137 )
1243
1244	IF ( last_time_coordinate(1) >= simulated_time ) THEN
1245	message_string = 'NetCDF file for cross sections ' // &
1246	TRIM( var ) // ' from previuos run found,' // &
1247	'&but this file cannot be extended becaus' // &
1248	'e the current output time' // &
1249	'&is less or equal than the last output t' // &
1250	'ime on this file.' // &
1251	'&New file is created instead.'
1252	CALL message( 'define_netcdf_header', 'PA0252', 0, 1, 0, 6, 0 )
1253	do2d_xy_time_count(av) = 0
1254	extend = .FALSE.
1255	RETURN
1256	ENDIF
1257
1258	!
1259	!-- Dataset seems to be extendable.
1260	!-- Now get the variable ids.
1261	i = 1
1262	DO WHILE ( do2d(av,i)(1:1) /= ' ' )
1263	IF ( INDEX( do2d(av,i), 'xy' ) /= 0 ) THEN
1264	netcdf_var_name = do2d(av,i)
1265	CALL clean_netcdf_varname( netcdf_var_name )
1266	nc_stat = NF90_INQ_VARID( id_set_xy(av), netcdf_var_name, &
1267	id_var_do2d(av,i) )
1268	CALL handle_netcdf_error( 'netcdf', 138 )
1269	ENDIF
1270	i = i + 1
1271	ENDDO
1272
1273	!
1274	!-- Change the titel attribute on file
1275	nc_stat = NF90_PUT_ATT( id_set_xy(av), NF90_GLOBAL, 'title', &
1276	TRIM( run_description_header ) )
1277	CALL handle_netcdf_error( 'netcdf', 139 )
1278	message_string = 'NetCDF file for cross-sections ' // &
1279	TRIM( var ) // ' from previous run found.' // &
1280	'&This file will be extended.'
1281	CALL message( 'define_netcdf_header', 'PA0253', 0, 0, 0, 6, 0 )
1282
1283
1284	CASE ( 'xz_new' )
1285
1286	!
1287	!-- Define some global attributes of the dataset
1288	nc_stat = NF90_PUT_ATT( id_set_xz(av), NF90_GLOBAL, 'Conventions', &
1289	'COARDS' )
1290	CALL handle_netcdf_error( 'netcdf', 140 )
1291
1292	IF ( av == 0 ) THEN
1293	time_average_text = ' '
1294	ELSE
1295	WRITE (time_average_text, '('', '',F7.1,'' s average'')') &
1296	averaging_interval
1297	ENDIF
1298	nc_stat = NF90_PUT_ATT( id_set_xz(av), NF90_GLOBAL, 'title', &
1299	TRIM( run_description_header ) // &
1300	TRIM( time_average_text ) )
1301	CALL handle_netcdf_error( 'netcdf', 141 )
1302	IF ( av == 1 ) THEN
1303	WRITE ( time_average_text,'(F7.1,'' s avg'')' ) averaging_interval
1304	nc_stat = NF90_PUT_ATT( id_set_xz(av), NF90_GLOBAL, 'time_avg', &
1305	TRIM( time_average_text ) )
1306	CALL handle_netcdf_error( 'netcdf', 141 )
1307	ENDIF
1308
1309	!
1310	!-- Define time coordinate for xz sections (unlimited dimension)
1311	nc_stat = NF90_DEF_DIM( id_set_xz(av), 'time', NF90_UNLIMITED, &
1312	id_dim_time_xz(av) )
1313	CALL handle_netcdf_error( 'netcdf', 142 )
1314
1315	nc_stat = NF90_DEF_VAR( id_set_xz(av), 'time', NF90_DOUBLE, &
1316	id_dim_time_xz(av), id_var_time_xz(av) )
1317	CALL handle_netcdf_error( 'netcdf', 143 )
1318
1319	nc_stat = NF90_PUT_ATT( id_set_xz(av), id_var_time_xz(av), 'units', &
1320	'seconds')
1321	CALL handle_netcdf_error( 'netcdf', 144 )
1322
1323	!
1324	!-- Define the spatial dimensions and coordinates for xz-sections.
1325	!-- First, determine the number of vertical sections to be written.
1326	IF ( section(1,2) == -9999 ) THEN
1327	RETURN
1328	ELSE
1329	ns = 1
1330	DO WHILE ( section(ns,2) /= -9999 .AND. ns <= 100 )
1331	ns = ns + 1
1332	ENDDO
1333	ns = ns - 1
1334	ENDIF
1335
1336	!
1337	!-- Define y-axis (for scalar position)
1338	nc_stat = NF90_DEF_DIM( id_set_xz(av), 'y_xz', ns, id_dim_y_xz(av) )
1339	CALL handle_netcdf_error( 'netcdf', 145 )
1340
1341	nc_stat = NF90_DEF_VAR( id_set_xz(av), 'y_xz', NF90_DOUBLE, &
1342	id_dim_y_xz(av), id_var_y_xz(av) )
1343	CALL handle_netcdf_error( 'netcdf', 146 )
1344
1345	nc_stat = NF90_PUT_ATT( id_set_xz(av), id_var_y_xz(av), 'units', &
1346	'meters' )
1347	CALL handle_netcdf_error( 'netcdf', 147 )
1348
1349	!
1350	!-- Define y-axis (for v position)
1351	nc_stat = NF90_DEF_DIM( id_set_xz(av), 'yv_xz', ns, id_dim_yv_xz(av) )
1352	CALL handle_netcdf_error( 'netcdf', 369 )
1353
1354	nc_stat = NF90_DEF_VAR( id_set_xz(av), 'yv_xz', NF90_DOUBLE, &
1355	id_dim_yv_xz(av), id_var_yv_xz(av) )
1356	CALL handle_netcdf_error( 'netcdf', 370 )
1357
1358	nc_stat = NF90_PUT_ATT( id_set_xz(av), id_var_yv_xz(av), 'units', &
1359	'meters' )
1360	CALL handle_netcdf_error( 'netcdf', 371 )
1361
1362	!
1363	!-- Define a variable to store the layer indices of the vertical cross
1364	!-- sections
1365	nc_stat = NF90_DEF_VAR( id_set_xz(av), 'ind_y_xz', NF90_DOUBLE, &
1366	id_dim_y_xz(av), id_var_ind_y_xz(av) )
1367	CALL handle_netcdf_error( 'netcdf', 148 )
1368
1369	nc_stat = NF90_PUT_ATT( id_set_xz(av), id_var_ind_y_xz(av), 'units', &
1370	'gridpoints')
1371	CALL handle_netcdf_error( 'netcdf', 149 )
1372
1373	!
1374	!-- Define x-axis (for scalar position)
1375	nc_stat = NF90_DEF_DIM( id_set_xz(av), 'x', nx+2, id_dim_x_xz(av) )
1376	CALL handle_netcdf_error( 'netcdf', 150 )
1377
1378	nc_stat = NF90_DEF_VAR( id_set_xz(av), 'x', NF90_DOUBLE, &
1379	id_dim_x_xz(av), id_var_x_xz(av) )
1380	CALL handle_netcdf_error( 'netcdf', 151 )
1381
1382	nc_stat = NF90_PUT_ATT( id_set_xz(av), id_var_x_xz(av), 'units', &
1383	'meters' )
1384	CALL handle_netcdf_error( 'netcdf', 152 )
1385
1386	!
1387	!-- Define x-axis (for u position)
1388	nc_stat = NF90_DEF_DIM( id_set_xz(av), 'xu', nx+2, id_dim_xu_xz(av) )
1389	CALL handle_netcdf_error( 'netcdf', 372 )
1390
1391	nc_stat = NF90_DEF_VAR( id_set_xz(av), 'xu', NF90_DOUBLE, &
1392	id_dim_xu_xz(av), id_var_xu_xz(av) )
1393	CALL handle_netcdf_error( 'netcdf', 373 )
1394
1395	nc_stat = NF90_PUT_ATT( id_set_xz(av), id_var_xu_xz(av), 'units', &
1396	'meters' )
1397	CALL handle_netcdf_error( 'netcdf', 374 )
1398
1399	!
1400	!-- Define the two z-axes (zu and zw)
1401	nc_stat = NF90_DEF_DIM( id_set_xz(av), 'zu', nz+2, id_dim_zu_xz(av) )
1402	CALL handle_netcdf_error( 'netcdf', 153 )
1403
1404	nc_stat = NF90_DEF_VAR( id_set_xz(av), 'zu', NF90_DOUBLE, &
1405	id_dim_zu_xz(av), id_var_zu_xz(av) )
1406	CALL handle_netcdf_error( 'netcdf', 154 )
1407
1408	nc_stat = NF90_PUT_ATT( id_set_xz(av), id_var_zu_xz(av), 'units', &
1409	'meters' )
1410	CALL handle_netcdf_error( 'netcdf', 155 )
1411
1412	nc_stat = NF90_DEF_DIM( id_set_xz(av), 'zw', nz+2, id_dim_zw_xz(av) )
1413	CALL handle_netcdf_error( 'netcdf', 156 )
1414
1415	nc_stat = NF90_DEF_VAR( id_set_xz(av), 'zw', NF90_DOUBLE, &
1416	id_dim_zw_xz(av), id_var_zw_xz(av) )
1417	CALL handle_netcdf_error( 'netcdf', 157 )
1418
1419	nc_stat = NF90_PUT_ATT( id_set_xz(av), id_var_zw_xz(av), 'units', &
1420	'meters' )
1421	CALL handle_netcdf_error( 'netcdf', 158 )
1422
1423
1424	!
1425	!-- Define the variables
1426	var_list = ';'
1427	i = 1
1428
1429	DO WHILE ( do2d(av,i)(1:1) /= ' ' )
1430
1431	IF ( INDEX( do2d(av,i), 'xz' ) /= 0 ) THEN
1432
1433	!
1434	!-- Check for the grid
1435	found = .TRUE.
1436	SELECT CASE ( do2d(av,i) )
1437	!
1438	!-- Most variables are defined on the zu grid
1439	CASE ( 'e_xz', 'p_xz', 'pc_xz', 'pr_xz', 'pt_xz', 'q_xz', &
1440	'ql_xz', 'ql_c_xz', 'ql_v_xz', 'ql_vp_xz', 'qv_xz', &
1441	'rho_xz', 's_xz', 'sa_xz', 'vpt_xz' )
1442
1443	grid_x = 'x'
1444	grid_y = 'y'
1445	grid_z = 'zu'
1446	!
1447	!-- u grid
1448	CASE ( 'u_xz' )
1449
1450	grid_x = 'xu'
1451	grid_y = 'y'
1452	grid_z = 'zu'
1453	!
1454	!-- v grid
1455	CASE ( 'v_xz' )
1456
1457	grid_x = 'x'
1458	grid_y = 'yv'
1459	grid_z = 'zu'
1460	!
1461	!-- w grid
1462	CASE ( 'w_xz' )
1463
1464	grid_x = 'x'
1465	grid_y = 'y'
1466	grid_z = 'zw'
1467
1468	CASE DEFAULT
1469	!
1470	!-- Check for user-defined quantities
1471	CALL user_define_netcdf_grid( do2d(av,i), found, &
1472	grid_x, grid_y, grid_z )
1473
1474	END SELECT
1475
1476	!
1477	!-- Select the respective dimension ids
1478	IF ( grid_x == 'x' ) THEN
1479	id_x = id_dim_x_xz(av)
1480	ELSEIF ( grid_x == 'xu' ) THEN
1481	id_x = id_dim_xu_xz(av)
1482	ENDIF
1483
1484	IF ( grid_y == 'y' ) THEN
1485	id_y = id_dim_y_xz(av)
1486	ELSEIF ( grid_y == 'yv' ) THEN
1487	id_y = id_dim_yv_xz(av)
1488	ENDIF
1489
1490	IF ( grid_z == 'zu' ) THEN
1491	id_z = id_dim_zu_xz(av)
1492	ELSEIF ( grid_z == 'zw' ) THEN
1493	id_z = id_dim_zw_xz(av)
1494	ENDIF
1495
1496	!
1497	!-- Define the grid
1498	nc_stat = NF90_DEF_VAR( id_set_xz(av), do2d(av,i), &
1499	nc_precision(2), &
1500	(/ id_x, id_y, id_z, id_dim_time_xz(av) /), &
1501	id_var_do2d(av,i) )
1502
1503	IF ( .NOT. found ) THEN
1504	WRITE ( message_string, * ) 'no grid defined for', &
1505	' variable ', TRIM( do2d(av,i) )
1506	CALL message( 'define_netcdf_header', 'PA0244',&
1507	0, 1, 0, 6, 0 )
1508	ENDIF
1509
1510	var_list = TRIM( var_list ) // TRIM( do2d(av,i) ) // ';'
1511
1512	CALL handle_netcdf_error( 'netcdf', 159 )
1513	!
1514	!-- Store the 'real' name of the variable (with *, for example)
1515	!-- in the long_name attribute. This is evaluated by Ferret,
1516	!-- for example.
1517	nc_stat = NF90_PUT_ATT( id_set_xz(av), id_var_do2d(av,i), &
1518	'long_name', do2d(av,i) )
1519	CALL handle_netcdf_error( 'netcdf', 160 )
1520	!
1521	!-- Define the variable's unit
1522	nc_stat = NF90_PUT_ATT( id_set_xz(av), id_var_do2d(av,i), &
1523	'units', TRIM( do2d_unit(av,i) ) )
1524	CALL handle_netcdf_error( 'netcdf', 355 )
1525	ENDIF
1526
1527	i = i + 1
1528
1529	ENDDO
1530
1531	!
1532	!-- No arrays to output. Close the netcdf file and return.
1533	IF ( i == 1 ) RETURN
1534
1535	!
1536	!-- Write the list of variables as global attribute (this is used by
1537	!-- restart runs and by combine_plot_fields)
1538	nc_stat = NF90_PUT_ATT( id_set_xz(av), NF90_GLOBAL, 'VAR_LIST', &
1539	var_list )
1540	CALL handle_netcdf_error( 'netcdf', 161 )
1541
1542	!
1543	!-- Leave NetCDF define mode
1544	nc_stat = NF90_ENDDEF( id_set_xz(av) )
1545	CALL handle_netcdf_error( 'netcdf', 162 )
1546
1547	!
1548	!-- Write axis data: y_xz, x, zu, zw
1549	ALLOCATE( netcdf_data(1:ns) )
1550
1551	!
1552	!-- Write y_xz data (shifted by +dy/2)
1553	DO i = 1, ns
1554	IF( section(i,2) == -1 ) THEN
1555	netcdf_data(i) = -1.0 ! section averaged along y
1556	ELSE
1557	netcdf_data(i) = ( section(i,2) + 0.5 ) * dy
1558	ENDIF
1559	ENDDO
1560	nc_stat = NF90_PUT_VAR( id_set_xz(av), id_var_y_xz(av), netcdf_data, &
1561	start = (/ 1 /), count = (/ ns /) )
1562	CALL handle_netcdf_error( 'netcdf', 163 )
1563
1564	!
1565	!-- Write yv_xz data
1566	DO i = 1, ns
1567	IF( section(i,2) == -1 ) THEN
1568	netcdf_data(i) = -1.0 ! section averaged along y
1569	ELSE
1570	netcdf_data(i) = section(i,2) * dy
1571	ENDIF
1572	ENDDO
1573	nc_stat = NF90_PUT_VAR( id_set_xz(av), id_var_yv_xz(av), &
1574	netcdf_data, start = (/ 1 /), &
1575	count = (/ ns /) )
1576	CALL handle_netcdf_error( 'netcdf', 375 )
1577
1578	!
1579	!-- Write gridpoint number data
1580	netcdf_data(1:ns) = section(1:ns,2)
1581	nc_stat = NF90_PUT_VAR( id_set_xz(av), id_var_ind_y_xz(av), &
1582	netcdf_data, start = (/ 1 /), &
1583	count = (/ ns /) )
1584	CALL handle_netcdf_error( 'netcdf', 164 )
1585
1586
1587	DEALLOCATE( netcdf_data )
1588
1589	!
1590	!-- Write data for x (shifted by +dx/2) and xu axis
1591	ALLOCATE( netcdf_data(0:nx+1) )
1592
1593	DO i = 0, nx+1
1594	netcdf_data(i) = ( i + 0.5 ) * dx
1595	ENDDO
1596
1597	nc_stat = NF90_PUT_VAR( id_set_xz(av), id_var_x_xz(av), netcdf_data, &
1598	start = (/ 1 /), count = (/ nx+2 /) )
1599	CALL handle_netcdf_error( 'netcdf', 165 )
1600
1601	DO i = 0, nx+1
1602	netcdf_data(i) = i * dx
1603	ENDDO
1604
1605	nc_stat = NF90_PUT_VAR( id_set_xz(av), id_var_xu_xz(av), &
1606	netcdf_data, start = (/ 1 /), &
1607	count = (/ nx+2 /) )
1608	CALL handle_netcdf_error( 'netcdf', 377 )
1609
1610	DEALLOCATE( netcdf_data )
1611
1612	!
1613	!-- Write zu and zw data (vertical axes)
1614	ALLOCATE( netcdf_data(0:nz+1) )
1615
1616	netcdf_data(0:nz+1) = zu(nzb:nzt+1)
1617	nc_stat = NF90_PUT_VAR( id_set_xz(av), id_var_zu_xz(av), &
1618	netcdf_data, start = (/ 1 /), &
1619	count = (/ nz+2 /) )
1620	CALL handle_netcdf_error( 'netcdf', 166 )
1621
1622	netcdf_data(0:nz+1) = zw(nzb:nzt+1)
1623	nc_stat = NF90_PUT_VAR( id_set_xz(av), id_var_zw_xz(av), &
1624	netcdf_data, start = (/ 1 /), &
1625	count = (/ nz+2 /) )
1626	CALL handle_netcdf_error( 'netcdf', 167 )
1627
1628	DEALLOCATE( netcdf_data )
1629
1630
1631	CASE ( 'xz_ext' )
1632
1633	!
1634	!-- Get the list of variables and compare with the actual run.
1635	!-- First var_list_old has to be reset, since GET_ATT does not assign
1636	!-- trailing blanks.
1637	var_list_old = ' '
1638	nc_stat = NF90_GET_ATT( id_set_xz(av), NF90_GLOBAL, 'VAR_LIST', &
1639	var_list_old )
1640	CALL handle_netcdf_error( 'netcdf', 168 )
1641
1642	var_list = ';'
1643	i = 1
1644	DO WHILE ( do2d(av,i)(1:1) /= ' ' )
1645	IF ( INDEX( do2d(av,i), 'xz' ) /= 0 ) THEN
1646	netcdf_var_name = do2d(av,i)
1647	CALL clean_netcdf_varname( netcdf_var_name )
1648	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // ';'
1649	ENDIF
1650	i = i + 1
1651	ENDDO
1652
1653	IF ( av == 0 ) THEN
1654	var = '(xz)'
1655	ELSE
1656	var = '(xz_av)'
1657	ENDIF
1658
1659	IF ( TRIM( var_list ) /= TRIM( var_list_old ) ) THEN
1660	message_string = 'NetCDF file for cross-sections ' // &
1661	TRIM( var ) // ' from previuos run found,' // &
1662	'& but this file cannot be extended due to' // &
1663	' variable mismatch.' // &
1664	'&New file is created instead.'
1665	CALL message( 'define_netcdf_header', 'PA0249', 0, 1, 0, 6, 0 )
1666	extend = .FALSE.
1667	RETURN
1668	ENDIF
1669
1670	!
1671	!-- Calculate the number of current sections
1672	ns = 1
1673	DO WHILE ( section(ns,2) /= -9999 .AND. ns <= 100 )
1674	ns = ns + 1
1675	ENDDO
1676	ns = ns - 1
1677
1678	!
1679	!-- Get and compare the number of vertical cross sections
1680	nc_stat = NF90_INQ_VARID( id_set_xz(av), 'y_xz', id_var_y_xz(av) )
1681	CALL handle_netcdf_error( 'netcdf', 169 )
1682
1683	nc_stat = NF90_INQUIRE_VARIABLE( id_set_xz(av), id_var_y_xz(av), &
1684	dimids = id_dim_y_xz_old )
1685	CALL handle_netcdf_error( 'netcdf', 170 )
1686	id_dim_y_xz(av) = id_dim_y_xz_old(1)
1687
1688	nc_stat = NF90_INQUIRE_DIMENSION( id_set_xz(av), id_dim_y_xz(av), &
1689	len = ns_old )
1690	CALL handle_netcdf_error( 'netcdf', 171 )
1691
1692	IF ( ns /= ns_old ) THEN
1693	message_string = 'NetCDF file for cross-sections ' // &
1694	TRIM( var ) // ' from previuos run found,' // &
1695	'&but this file cannot be extended due to' // &
1696	' mismatch in number of' // &
1697	'&cross sections.' // &
1698	'&New file is created instead.'
1699	CALL message( 'define_netcdf_header', 'PA0250', 0, 1, 0, 6, 0 )
1700	extend = .FALSE.
1701	RETURN
1702	ENDIF
1703
1704	!
1705	!-- Get and compare the heights of the cross sections
1706	ALLOCATE( netcdf_data(1:ns_old) )
1707
1708	nc_stat = NF90_GET_VAR( id_set_xz(av), id_var_y_xz(av), netcdf_data )
1709	CALL handle_netcdf_error( 'netcdf', 172 )
1710
1711	DO i = 1, ns
1712	IF ( section(i,2) /= -1 ) THEN
1713	IF ( ( section(i,2) * dy ) /= netcdf_data(i) ) THEN
1714	message_string = 'NetCDF file for cross-sections ' // &
1715	TRIM( var ) // ' from previuos run found,' // &
1716	'&but this file cannot be extended' // &
1717	' due to mismatch in cross' // &
1718	'&section levels.' // &
1719	'&New file is created instead.'
1720	CALL message( 'define_netcdf_header', 'PA0251', &
1721	0, 1, 0, 6, 0 )
1722	extend = .FALSE.
1723	RETURN
1724	ENDIF
1725	ELSE
1726	IF ( -1.0 /= netcdf_data(i) ) THEN
1727	message_string = 'NetCDF file for cross-sections ' // &
1728	TRIM( var ) // ' from previuos run found,' // &
1729	'&but this file cannot be extended' // &
1730	' due to mismatch in cross' // &
1731	'&section levels.' // &
1732	'&New file is created instead.'
1733	CALL message( 'define_netcdf_header', 'PA0251', &
1734	0, 1, 0, 6, 0 )
1735	extend = .FALSE.
1736	RETURN
1737	ENDIF
1738	ENDIF
1739	ENDDO
1740
1741	DEALLOCATE( netcdf_data )
1742
1743	!
1744	!-- Get the id of the time coordinate (unlimited coordinate) and its
1745	!-- last index on the file. The next time level is do2d..count+1.
1746	!-- The current time must be larger than the last output time
1747	!-- on the file.
1748	nc_stat = NF90_INQ_VARID( id_set_xz(av), 'time', id_var_time_xz(av) )
1749	CALL handle_netcdf_error( 'netcdf', 173 )
1750
1751	nc_stat = NF90_INQUIRE_VARIABLE( id_set_xz(av), id_var_time_xz(av), &
1752	dimids = id_dim_time_old )
1753	CALL handle_netcdf_error( 'netcdf', 174 )
1754	id_dim_time_xz(av) = id_dim_time_old(1)
1755
1756	nc_stat = NF90_INQUIRE_DIMENSION( id_set_xz(av), id_dim_time_xz(av), &
1757	len = do2d_xz_time_count(av) )
1758	CALL handle_netcdf_error( 'netcdf', 175 )
1759
1760	nc_stat = NF90_GET_VAR( id_set_xz(av), id_var_time_xz(av), &
1761	last_time_coordinate, &
1762	start = (/ do2d_xz_time_count(av) /), &
1763	count = (/ 1 /) )
1764	CALL handle_netcdf_error( 'netcdf', 176 )
1765
1766	IF ( last_time_coordinate(1) >= simulated_time ) THEN
1767	message_string = 'NetCDF file for cross sections ' // &
1768	TRIM( var ) // ' from previuos run found,' // &
1769	'&but this file cannot be extended becaus' // &
1770	'e the current output time' // &
1771	'&is less or equal than the last output t' // &
1772	'ime on this file.' // &
1773	'&New file is created instead.'
1774	CALL message( 'define_netcdf_header', 'PA0252', 0, 1, 0, 6, 0 )
1775	do2d_xz_time_count(av) = 0
1776	extend = .FALSE.
1777	RETURN
1778	ENDIF
1779
1780	!
1781	!-- Dataset seems to be extendable.
1782	!-- Now get the variable ids.
1783	i = 1
1784	DO WHILE ( do2d(av,i)(1:1) /= ' ' )
1785	IF ( INDEX( do2d(av,i), 'xz' ) /= 0 ) THEN
1786	netcdf_var_name = do2d(av,i)
1787	CALL clean_netcdf_varname( netcdf_var_name )
1788	nc_stat = NF90_INQ_VARID( id_set_xz(av), netcdf_var_name, &
1789	id_var_do2d(av,i) )
1790	CALL handle_netcdf_error( 'netcdf', 177 )
1791	ENDIF
1792	i = i + 1
1793	ENDDO
1794
1795	!
1796	!-- Change the titel attribute on file
1797	nc_stat = NF90_PUT_ATT( id_set_xz(av), NF90_GLOBAL, 'title', &
1798	TRIM( run_description_header ) )
1799	CALL handle_netcdf_error( 'netcdf', 178 )
1800	message_string = 'NetCDF file for cross-sections ' // &
1801	TRIM( var ) // ' from previous run found.' // &
1802	'&This file will be extended.'
1803	CALL message( 'define_netcdf_header', 'PA0253', 0, 0, 0, 6, 0 )
1804
1805
1806	CASE ( 'yz_new' )
1807
1808	!
1809	!-- Define some global attributes of the dataset
1810	nc_stat = NF90_PUT_ATT( id_set_yz(av), NF90_GLOBAL, 'Conventions', &
1811	'COARDS' )
1812	CALL handle_netcdf_error( 'netcdf', 179 )
1813
1814	IF ( av == 0 ) THEN
1815	time_average_text = ' '
1816	ELSE
1817	WRITE (time_average_text, '('', '',F7.1,'' s average'')') &
1818	averaging_interval
1819	ENDIF
1820	nc_stat = NF90_PUT_ATT( id_set_yz(av), NF90_GLOBAL, 'title', &
1821	TRIM( run_description_header ) // &
1822	TRIM( time_average_text ) )
1823	CALL handle_netcdf_error( 'netcdf', 180 )
1824	IF ( av == 1 ) THEN
1825	WRITE ( time_average_text,'(F7.1,'' s avg'')' ) averaging_interval
1826	nc_stat = NF90_PUT_ATT( id_set_yz(av), NF90_GLOBAL, 'time_avg', &
1827	TRIM( time_average_text ) )
1828	CALL handle_netcdf_error( 'netcdf', 180 )
1829	ENDIF
1830
1831	!
1832	!-- Define time coordinate for yz sections (unlimited dimension)
1833	nc_stat = NF90_DEF_DIM( id_set_yz(av), 'time', NF90_UNLIMITED, &
1834	id_dim_time_yz(av) )
1835	CALL handle_netcdf_error( 'netcdf', 181 )
1836
1837	nc_stat = NF90_DEF_VAR( id_set_yz(av), 'time', NF90_DOUBLE, &
1838	id_dim_time_yz(av), id_var_time_yz(av) )
1839	CALL handle_netcdf_error( 'netcdf', 182 )
1840
1841	nc_stat = NF90_PUT_ATT( id_set_yz(av), id_var_time_yz(av), 'units', &
1842	'seconds')
1843	CALL handle_netcdf_error( 'netcdf', 183 )
1844
1845	!
1846	!-- Define the spatial dimensions and coordinates for yz-sections.
1847	!-- First, determine the number of vertical sections to be written.
1848	IF ( section(1,3) == -9999 ) THEN
1849	RETURN
1850	ELSE
1851	ns = 1
1852	DO WHILE ( section(ns,3) /= -9999 .AND. ns <= 100 )
1853	ns = ns + 1
1854	ENDDO
1855	ns = ns - 1
1856	ENDIF
1857
1858	!
1859	!-- Define x axis (for scalar position)
1860	nc_stat = NF90_DEF_DIM( id_set_yz(av), 'x_yz', ns, id_dim_x_yz(av) )
1861	CALL handle_netcdf_error( 'netcdf', 184 )
1862
1863	nc_stat = NF90_DEF_VAR( id_set_yz(av), 'x_yz', NF90_DOUBLE, &
1864	id_dim_x_yz(av), id_var_x_yz(av) )
1865	CALL handle_netcdf_error( 'netcdf', 185 )
1866
1867	nc_stat = NF90_PUT_ATT( id_set_yz(av), id_var_x_yz(av), 'units', &
1868	'meters' )
1869	CALL handle_netcdf_error( 'netcdf', 186 )
1870
1871	!
1872	!-- Define x axis (for u position)
1873	nc_stat = NF90_DEF_DIM( id_set_yz(av), 'xu_yz', ns, id_dim_xu_yz(av) )
1874	CALL handle_netcdf_error( 'netcdf', 377 )
1875
1876	nc_stat = NF90_DEF_VAR( id_set_yz(av), 'xu_yz', NF90_DOUBLE, &
1877	id_dim_xu_yz(av), id_var_xu_yz(av) )
1878	CALL handle_netcdf_error( 'netcdf', 378 )
1879
1880	nc_stat = NF90_PUT_ATT( id_set_yz(av), id_var_xu_yz(av), 'units', &
1881	'meters' )
1882	CALL handle_netcdf_error( 'netcdf', 379 )
1883
1884	!
1885	!-- Define a variable to store the layer indices of the vertical cross
1886	!-- sections
1887	nc_stat = NF90_DEF_VAR( id_set_yz(av), 'ind_x_yz', NF90_DOUBLE, &
1888	id_dim_x_yz(av), id_var_ind_x_yz(av) )
1889	CALL handle_netcdf_error( 'netcdf', 187 )
1890
1891	nc_stat = NF90_PUT_ATT( id_set_yz(av), id_var_ind_x_yz(av), 'units', &
1892	'gridpoints')
1893	CALL handle_netcdf_error( 'netcdf', 188 )
1894
1895	!
1896	!-- Define y-axis (for scalar position)
1897	nc_stat = NF90_DEF_DIM( id_set_yz(av), 'y', ny+2, id_dim_y_yz(av) )
1898	CALL handle_netcdf_error( 'netcdf', 189 )
1899
1900	nc_stat = NF90_DEF_VAR( id_set_yz(av), 'y', NF90_DOUBLE, &
1901	id_dim_y_yz(av), id_var_y_yz(av) )
1902	CALL handle_netcdf_error( 'netcdf', 190 )
1903
1904	nc_stat = NF90_PUT_ATT( id_set_yz(av), id_var_y_yz(av), 'units', &
1905	'meters' )
1906	CALL handle_netcdf_error( 'netcdf', 191 )
1907
1908	!
1909	!-- Define y-axis (for v position)
1910	nc_stat = NF90_DEF_DIM( id_set_yz(av), 'yv', ny+2, id_dim_yv_yz(av) )
1911	CALL handle_netcdf_error( 'netcdf', 380 )
1912
1913	nc_stat = NF90_DEF_VAR( id_set_yz(av), 'yv', NF90_DOUBLE, &
1914	id_dim_yv_yz(av), id_var_yv_yz(av) )
1915	CALL handle_netcdf_error( 'netcdf', 381 )
1916
1917	nc_stat = NF90_PUT_ATT( id_set_yz(av), id_var_yv_yz(av), 'units', &
1918	'meters' )
1919	CALL handle_netcdf_error( 'netcdf', 382 )
1920
1921	!
1922	!-- Define the two z-axes (zu and zw)
1923	nc_stat = NF90_DEF_DIM( id_set_yz(av), 'zu', nz+2, id_dim_zu_yz(av) )
1924	CALL handle_netcdf_error( 'netcdf', 192 )
1925
1926	nc_stat = NF90_DEF_VAR( id_set_yz(av), 'zu', NF90_DOUBLE, &
1927	id_dim_zu_yz(av), id_var_zu_yz(av) )
1928	CALL handle_netcdf_error( 'netcdf', 193 )
1929
1930	nc_stat = NF90_PUT_ATT( id_set_yz(av), id_var_zu_yz(av), 'units', &
1931	'meters' )
1932	CALL handle_netcdf_error( 'netcdf', 194 )
1933
1934	nc_stat = NF90_DEF_DIM( id_set_yz(av), 'zw', nz+2, id_dim_zw_yz(av) )
1935	CALL handle_netcdf_error( 'netcdf', 195 )
1936
1937	nc_stat = NF90_DEF_VAR( id_set_yz(av), 'zw', NF90_DOUBLE, &
1938	id_dim_zw_yz(av), id_var_zw_yz(av) )
1939	CALL handle_netcdf_error( 'netcdf', 196 )
1940
1941	nc_stat = NF90_PUT_ATT( id_set_yz(av), id_var_zw_yz(av), 'units', &
1942	'meters' )
1943	CALL handle_netcdf_error( 'netcdf', 197 )
1944
1945
1946	!
1947	!-- Define the variables
1948	var_list = ';'
1949	i = 1
1950
1951	DO WHILE ( do2d(av,i)(1:1) /= ' ' )
1952
1953	IF ( INDEX( do2d(av,i), 'yz' ) /= 0 ) THEN
1954
1955	!
1956	!-- Check for the grid
1957	found = .TRUE.
1958	SELECT CASE ( do2d(av,i) )
1959	!
1960	!-- Most variables are defined on the zu grid
1961	CASE ( 'e_yz', 'p_yz', 'pc_yz', 'pr_yz', 'pt_yz', 'q_yz', &
1962	'ql_yz', 'ql_c_yz', 'ql_v_yz', 'ql_vp_yz', 'qv_yz', &
1963	'rho_yz', 's_yz', 'sa_yz', 'vpt_yz' )
1964
1965	grid_x = 'x'
1966	grid_y = 'y'
1967	grid_z = 'zu'
1968	!
1969	!-- u grid
1970	CASE ( 'u_yz' )
1971
1972	grid_x = 'xu'
1973	grid_y = 'y'
1974	grid_z = 'zu'
1975	!
1976	!-- v grid
1977	CASE ( 'v_yz' )
1978
1979	grid_x = 'x'
1980	grid_y = 'yv'
1981	grid_z = 'zu'
1982	!
1983	!-- w grid
1984	CASE ( 'w_yz' )
1985
1986	grid_x = 'x'
1987	grid_y = 'y'
1988	grid_z = 'zw'
1989
1990	CASE DEFAULT
1991	!
1992	!-- Check for user-defined quantities
1993	CALL user_define_netcdf_grid( do2d(av,i), found, &
1994	grid_x, grid_y, grid_z )
1995
1996	END SELECT
1997
1998	!
1999	!-- Select the respective dimension ids
2000	IF ( grid_x == 'x' ) THEN
2001	id_x = id_dim_x_yz(av)
2002	ELSEIF ( grid_x == 'xu' ) THEN
2003	id_x = id_dim_xu_yz(av)
2004	ENDIF
2005
2006	IF ( grid_y == 'y' ) THEN
2007	id_y = id_dim_y_yz(av)
2008	ELSEIF ( grid_y == 'yv' ) THEN
2009	id_y = id_dim_yv_yz(av)
2010	ENDIF
2011
2012	IF ( grid_z == 'zu' ) THEN
2013	id_z = id_dim_zu_yz(av)
2014	ELSEIF ( grid_z == 'zw' ) THEN
2015	id_z = id_dim_zw_yz(av)
2016	ENDIF
2017
2018	!
2019	!-- Define the grid
2020	nc_stat = NF90_DEF_VAR( id_set_yz(av), do2d(av,i), &
2021	nc_precision(3), &
2022	(/ id_x, id_y, id_z, id_dim_time_yz(av) /), &
2023	id_var_do2d(av,i) )
2024
2025	IF ( .NOT. found ) THEN
2026	WRITE ( message_string, * ) 'no grid defined for', &
2027	' variable ', TRIM( do2d(av,i) )
2028	CALL message( 'define_netcdf_header', 'PA0244',&
2029	0, 1, 0, 6, 0 )
2030	ENDIF
2031
2032	var_list = TRIM( var_list ) // TRIM( do2d(av,i) ) // ';'
2033
2034	CALL handle_netcdf_error( 'netcdf', 198 )
2035	!
2036	!-- Store the 'real' name of the variable (with *, for example)
2037	!-- in the long_name attribute. This is evaluated by Ferret,
2038	!-- for example.
2039	nc_stat = NF90_PUT_ATT( id_set_yz(av), id_var_do2d(av,i), &
2040	'long_name', do2d(av,i) )
2041	CALL handle_netcdf_error( 'netcdf', 199 )
2042	!
2043	!-- Define the variable's unit
2044	nc_stat = NF90_PUT_ATT( id_set_yz(av), id_var_do2d(av,i), &
2045	'units', TRIM( do2d_unit(av,i) ) )
2046	CALL handle_netcdf_error( 'netcdf', 356 )
2047	ENDIF
2048
2049	i = i + 1
2050
2051	ENDDO
2052
2053	!
2054	!-- No arrays to output. Close the netcdf file and return.
2055	IF ( i == 1 ) RETURN
2056
2057	!
2058	!-- Write the list of variables as global attribute (this is used by
2059	!-- restart runs and by combine_plot_fields)
2060	nc_stat = NF90_PUT_ATT( id_set_yz(av), NF90_GLOBAL, 'VAR_LIST', &
2061	var_list )
2062	CALL handle_netcdf_error( 'netcdf', 200 )
2063
2064	!
2065	!-- Leave NetCDF define mode
2066	nc_stat = NF90_ENDDEF( id_set_yz(av) )
2067	CALL handle_netcdf_error( 'netcdf', 201 )
2068
2069	!
2070	!-- Write axis data: x_yz, y, zu, zw
2071	ALLOCATE( netcdf_data(1:ns) )
2072
2073	!
2074	!-- Write x_yz data (shifted by +dx/2)
2075	DO i = 1, ns
2076	IF( section(i,3) == -1 ) THEN
2077	netcdf_data(i) = -1.0 ! section averaged along x
2078	ELSE
2079	netcdf_data(i) = ( section(i,3) + 0.5 ) * dx
2080	ENDIF
2081	ENDDO
2082	nc_stat = NF90_PUT_VAR( id_set_yz(av), id_var_x_yz(av), netcdf_data, &
2083	start = (/ 1 /), count = (/ ns /) )
2084	CALL handle_netcdf_error( 'netcdf', 202 )
2085
2086	!
2087	!-- Write x_yz data (xu grid)
2088	DO i = 1, ns
2089	IF( section(i,3) == -1 ) THEN
2090	netcdf_data(i) = -1.0 ! section averaged along x
2091	ELSE
2092	netcdf_data(i) = section(i,3) * dx
2093	ENDIF
2094	ENDDO
2095	nc_stat = NF90_PUT_VAR( id_set_yz(av), id_var_xu_yz(av), netcdf_data, &
2096	start = (/ 1 /), count = (/ ns /) )
2097	CALL handle_netcdf_error( 'netcdf', 383 )
2098
2099	!
2100	!-- Write gridpoint number data
2101	netcdf_data(1:ns) = section(1:ns,3)
2102	nc_stat = NF90_PUT_VAR( id_set_yz(av), id_var_ind_x_yz(av), &
2103	netcdf_data, start = (/ 1 /), &
2104	count = (/ ns /) )
2105	CALL handle_netcdf_error( 'netcdf', 203 )
2106
2107	DEALLOCATE( netcdf_data )
2108
2109	!
2110	!-- Write data for y (shifted by +dy/2) and yv axis
2111	ALLOCATE( netcdf_data(0:ny+1) )
2112
2113	DO j = 0, ny+1
2114	netcdf_data(j) = ( j + 0.5 ) * dy
2115	ENDDO
2116
2117	nc_stat = NF90_PUT_VAR( id_set_yz(av), id_var_y_yz(av), netcdf_data, &
2118	start = (/ 1 /), count = (/ ny+2 /) )
2119	CALL handle_netcdf_error( 'netcdf', 204 )
2120
2121	DO j = 0, ny+1
2122	netcdf_data(j) = j * dy
2123	ENDDO
2124
2125	nc_stat = NF90_PUT_VAR( id_set_yz(av), id_var_yv_yz(av), &
2126	netcdf_data, start = (/ 1 /), &
2127	count = (/ ny+2 /) )
2128	CALL handle_netcdf_error( 'netcdf', 384 )
2129
2130	DEALLOCATE( netcdf_data )
2131
2132	!
2133	!-- Write zu and zw data (vertical axes)
2134	ALLOCATE( netcdf_data(0:nz+1) )
2135
2136	netcdf_data(0:nz+1) = zu(nzb:nzt+1)
2137	nc_stat = NF90_PUT_VAR( id_set_yz(av), id_var_zu_yz(av), &
2138	netcdf_data, start = (/ 1 /), &
2139	count = (/ nz+2 /) )
2140	CALL handle_netcdf_error( 'netcdf', 205 )
2141
2142	netcdf_data(0:nz+1) = zw(nzb:nzt+1)
2143	nc_stat = NF90_PUT_VAR( id_set_yz(av), id_var_zw_yz(av), &
2144	netcdf_data, start = (/ 1 /), &
2145	count = (/ nz+2 /) )
2146	CALL handle_netcdf_error( 'netcdf', 206 )
2147
2148	DEALLOCATE( netcdf_data )
2149
2150
2151	CASE ( 'yz_ext' )
2152
2153	!
2154	!-- Get the list of variables and compare with the actual run.
2155	!-- First var_list_old has to be reset, since GET_ATT does not assign
2156	!-- trailing blanks.
2157	var_list_old = ' '
2158	nc_stat = NF90_GET_ATT( id_set_yz(av), NF90_GLOBAL, 'VAR_LIST', &
2159	var_list_old )
2160	CALL handle_netcdf_error( 'netcdf', 207 )
2161
2162	var_list = ';'
2163	i = 1
2164	DO WHILE ( do2d(av,i)(1:1) /= ' ' )
2165	IF ( INDEX( do2d(av,i), 'yz' ) /= 0 ) THEN
2166	netcdf_var_name = do2d(av,i)
2167	CALL clean_netcdf_varname( netcdf_var_name )
2168	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // ';'
2169	ENDIF
2170	i = i + 1
2171	ENDDO
2172
2173	IF ( av == 0 ) THEN
2174	var = '(yz)'
2175	ELSE
2176	var = '(yz_av)'
2177	ENDIF
2178
2179	IF ( TRIM( var_list ) /= TRIM( var_list_old ) ) THEN
2180	message_string = 'NetCDF file for cross-sections ' // &
2181	TRIM( var ) // ' from previuos run found,' // &
2182	'& but this file cannot be extended due to' // &
2183	' variable mismatch.' // &
2184	'&New file is created instead.'
2185	CALL message( 'define_netcdf_header', 'PA0249', 0, 1, 0, 6, 0 )
2186	extend = .FALSE.
2187	RETURN
2188	ENDIF
2189
2190	!
2191	!-- Calculate the number of current sections
2192	ns = 1
2193	DO WHILE ( section(ns,3) /= -9999 .AND. ns <= 100 )
2194	ns = ns + 1
2195	ENDDO
2196	ns = ns - 1
2197
2198	!
2199	!-- Get and compare the number of vertical cross sections
2200	nc_stat = NF90_INQ_VARID( id_set_yz(av), 'x_yz', id_var_x_yz(av) )
2201	CALL handle_netcdf_error( 'netcdf', 208 )
2202
2203	nc_stat = NF90_INQUIRE_VARIABLE( id_set_yz(av), id_var_x_yz(av), &
2204	dimids = id_dim_x_yz_old )
2205	CALL handle_netcdf_error( 'netcdf', 209 )
2206	id_dim_x_yz(av) = id_dim_x_yz_old(1)
2207
2208	nc_stat = NF90_INQUIRE_DIMENSION( id_set_yz(av), id_dim_x_yz(av), &
2209	len = ns_old )
2210	CALL handle_netcdf_error( 'netcdf', 210 )
2211
2212	IF ( ns /= ns_old ) THEN
2213	message_string = 'NetCDF file for cross-sections ' // &
2214	TRIM( var ) // ' from previuos run found,' // &
2215	'&but this file cannot be extended due to' // &
2216	' mismatch in number of' // &
2217	'&cross sections.' // &
2218	'&New file is created instead.'
2219	CALL message( 'define_netcdf_header', 'PA0250', 0, 1, 0, 6, 0 )
2220	extend = .FALSE.
2221	RETURN
2222	ENDIF
2223
2224	!
2225	!-- Get and compare the heights of the cross sections
2226	ALLOCATE( netcdf_data(1:ns_old) )
2227
2228	nc_stat = NF90_GET_VAR( id_set_yz(av), id_var_x_yz(av), netcdf_data )
2229	CALL handle_netcdf_error( 'netcdf', 211 )
2230
2231	DO i = 1, ns
2232	IF ( section(i,3) /= -1 ) THEN
2233	IF ( ( section(i,3) * dx ) /= netcdf_data(i) ) THEN
2234	message_string = 'NetCDF file for cross-sections ' // &
2235	TRIM( var ) // ' from previuos run found,' // &
2236	'&but this file cannot be extended' // &
2237	' due to mismatch in cross' // &
2238	'&section levels.' // &
2239	'&New file is created instead.'
2240	CALL message( 'define_netcdf_header', 'PA0251', &
2241	0, 1, 0, 6, 0 )
2242	extend = .FALSE.
2243	RETURN
2244	ENDIF
2245	ELSE
2246	IF ( -1.0 /= netcdf_data(i) ) THEN
2247	message_string = 'NetCDF file for cross-sections ' // &
2248	TRIM( var ) // ' from previuos run found,' // &
2249	'&but this file cannot be extended' // &
2250	' due to mismatch in cross' // &
2251	'&section levels.' // &
2252	'&New file is created instead.'
2253	CALL message( 'define_netcdf_header', 'PA0251', &
2254	0, 1, 0, 6, 0 )
2255	extend = .FALSE.
2256	RETURN
2257	ENDIF
2258	ENDIF
2259	ENDDO
2260
2261	DEALLOCATE( netcdf_data )
2262
2263	!
2264	!-- Get the id of the time coordinate (unlimited coordinate) and its
2265	!-- last index on the file. The next time level is pl2d..count+1.
2266	!-- The current time must be larger than the last output time
2267	!-- on the file.
2268	nc_stat = NF90_INQ_VARID( id_set_yz(av), 'time', id_var_time_yz(av) )
2269	CALL handle_netcdf_error( 'netcdf', 212 )
2270
2271	nc_stat = NF90_INQUIRE_VARIABLE( id_set_yz(av), id_var_time_yz(av), &
2272	dimids = id_dim_time_old )
2273	CALL handle_netcdf_error( 'netcdf', 213 )
2274	id_dim_time_yz(av) = id_dim_time_old(1)
2275
2276	nc_stat = NF90_INQUIRE_DIMENSION( id_set_yz(av), id_dim_time_yz(av), &
2277	len = do2d_yz_time_count(av) )
2278	CALL handle_netcdf_error( 'netcdf', 214 )
2279
2280	nc_stat = NF90_GET_VAR( id_set_yz(av), id_var_time_yz(av), &
2281	last_time_coordinate, &
2282	start = (/ do2d_yz_time_count(av) /), &
2283	count = (/ 1 /) )
2284	CALL handle_netcdf_error( 'netcdf', 215 )
2285
2286	IF ( last_time_coordinate(1) >= simulated_time ) THEN
2287	message_string = 'NetCDF file for cross sections ' // &
2288	TRIM( var ) // ' from previuos run found,' // &
2289	'&but this file cannot be extended becaus' // &
2290	'e the current output time' // &
2291	'&is less or equal than the last output t' // &
2292	'ime on this file.' // &
2293	'&New file is created instead.'
2294	CALL message( 'define_netcdf_header', 'PA0252', 0, 1, 0, 6, 0 )
2295	do2d_yz_time_count(av) = 0
2296	extend = .FALSE.
2297	RETURN
2298	ENDIF
2299
2300	!
2301	!-- Dataset seems to be extendable.
2302	!-- Now get the variable ids.
2303	i = 1
2304	DO WHILE ( do2d(av,i)(1:1) /= ' ' )
2305	IF ( INDEX( do2d(av,i), 'yz' ) /= 0 ) THEN
2306	netcdf_var_name = do2d(av,i)
2307	CALL clean_netcdf_varname( netcdf_var_name )
2308	nc_stat = NF90_INQ_VARID( id_set_yz(av), netcdf_var_name, &
2309	id_var_do2d(av,i) )
2310	CALL handle_netcdf_error( 'netcdf', 216 )
2311	ENDIF
2312	i = i + 1
2313	ENDDO
2314
2315	!
2316	!-- Change the titel attribute on file
2317	nc_stat = NF90_PUT_ATT( id_set_yz(av), NF90_GLOBAL, 'title', &
2318	TRIM( run_description_header ) )
2319	CALL handle_netcdf_error( 'netcdf', 217 )
2320	message_string = 'NetCDF file for cross-sections ' // &
2321	TRIM( var ) // ' from previous run found.' // &
2322	'&This file will be extended.'
2323	CALL message( 'define_netcdf_header', 'PA0253', 0, 0, 0, 6, 0 )
2324
2325
2326	CASE ( 'pr_new' )
2327
2328	!
2329	!-- Define some global attributes of the dataset
2330	IF ( averaging_interval_pr /= 0.0 ) THEN
2331	WRITE (time_average_text,'('', '',F7.1,'' s average'')') &
2332	averaging_interval_pr
2333	nc_stat = NF90_PUT_ATT( id_set_pr, NF90_GLOBAL, 'title', &
2334	TRIM( run_description_header ) // &
2335	TRIM( time_average_text ) )
2336	CALL handle_netcdf_error( 'netcdf', 218 )
2337
2338	WRITE ( time_average_text,'(F7.1,'' s avg'')' ) averaging_interval_pr
2339	nc_stat = NF90_PUT_ATT( id_set_pr, NF90_GLOBAL, 'time_avg', &
2340	TRIM( time_average_text ) )
2341	ELSE
2342	nc_stat = NF90_PUT_ATT( id_set_pr, NF90_GLOBAL, 'title', &
2343	TRIM( run_description_header ) )
2344	ENDIF
2345	CALL handle_netcdf_error( 'netcdf', 219 )
2346
2347	!
2348	!-- Define time coordinate for profiles (unlimited dimension)
2349	nc_stat = NF90_DEF_DIM( id_set_pr, 'time', NF90_UNLIMITED, &
2350	id_dim_time_pr )
2351	CALL handle_netcdf_error( 'netcdf', 220 )
2352
2353	nc_stat = NF90_DEF_VAR( id_set_pr, 'time', NF90_DOUBLE, &
2354	id_dim_time_pr, id_var_time_pr )
2355	CALL handle_netcdf_error( 'netcdf', 221 )
2356
2357	nc_stat = NF90_PUT_ATT( id_set_pr, id_var_time_pr, 'units', 'seconds')
2358	CALL handle_netcdf_error( 'netcdf', 222 )
2359
2360	!
2361	!-- Define the variables
2362	var_list = ';'
2363	DO i = 1, dopr_n
2364	!
2365	!-- First, remove those characters not allowed by NetCDF
2366	netcdf_var_name = data_output_pr(i)
2367	CALL clean_netcdf_varname( netcdf_var_name )
2368
2369	IF ( statistic_regions == 0 ) THEN
2370
2371	!
2372	!-- Define the z-axes (each variable gets its own z-axis)
2373	nc_stat = NF90_DEF_DIM( id_set_pr, 'z'//TRIM(netcdf_var_name), &
2374	nzt+2-nzb, id_dim_z_pr(i,0) )
2375	CALL handle_netcdf_error( 'netcdf', 223 )
2376
2377	nc_stat = NF90_DEF_VAR( id_set_pr, 'z'//TRIM(netcdf_var_name), &
2378	NF90_DOUBLE, id_dim_z_pr(i,0), &
2379	id_var_z_pr(i,0) )
2380	CALL handle_netcdf_error( 'netcdf', 224 )
2381
2382	nc_stat = NF90_PUT_ATT( id_set_pr, id_var_z_pr(i,0), 'units', &
2383	'meters' )
2384	CALL handle_netcdf_error( 'netcdf', 225 )
2385	!
2386	!-- Define the variable
2387	nc_stat = NF90_DEF_VAR( id_set_pr, netcdf_var_name, &
2388	nc_precision(5), (/ id_dim_z_pr(i,0), &
2389	id_dim_time_pr /), id_var_dopr(i,0) )
2390	CALL handle_netcdf_error( 'netcdf', 226 )
2391
2392	nc_stat = NF90_PUT_ATT( id_set_pr, id_var_dopr(i,0), &
2393	'long_name', TRIM( data_output_pr(i) ) )
2394	CALL handle_netcdf_error( 'netcdf', 227 )
2395
2396	nc_stat = NF90_PUT_ATT( id_set_pr, id_var_dopr(i,0), &
2397	'units', TRIM( dopr_unit(i) ) )
2398	CALL handle_netcdf_error( 'netcdf', 228 )
2399
2400	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // ';'
2401
2402	ELSE
2403	!
2404	!-- If statistic regions are defined, add suffix _SR+#SR to the
2405	!-- names
2406	DO j = 0, statistic_regions
2407	WRITE ( suffix, '(''_'',I1)' ) j
2408
2409	!
2410	!-- Define the z-axes (each variable gets it own z-axis)
2411	nc_stat = NF90_DEF_DIM( id_set_pr, &
2412	'z'//TRIM(netcdf_var_name)//suffix, &
2413	nzt+2-nzb, id_dim_z_pr(i,j) )
2414	CALL handle_netcdf_error( 'netcdf', 229 )
2415
2416	nc_stat = NF90_DEF_VAR( id_set_pr, &
2417	'z'//TRIM(netcdf_var_name)//suffix, &
2418	nc_precision(5), id_dim_z_pr(i,j), &
2419	id_var_z_pr(i,j) )
2420	CALL handle_netcdf_error( 'netcdf', 230 )
2421
2422	nc_stat = NF90_PUT_ATT( id_set_pr, id_var_z_pr(i,j), &
2423	'units', 'meters' )
2424	CALL handle_netcdf_error( 'netcdf', 231 )
2425
2426	!
2427	!-- Define the variable
2428	nc_stat = NF90_DEF_VAR( id_set_pr, &
2429	TRIM( netcdf_var_name ) // suffix, &
2430	nc_precision(5), &
2431	(/ id_dim_z_pr(i,j), &
2432	id_dim_time_pr /), id_var_dopr(i,j) )
2433	CALL handle_netcdf_error( 'netcdf', 232 )
2434
2435	nc_stat = NF90_PUT_ATT( id_set_pr, id_var_dopr(i,j), &
2436	'long_name', &
2437	TRIM( data_output_pr(i) ) // ' SR ' &
2438	// suffix(2:2) )
2439	CALL handle_netcdf_error( 'netcdf', 233 )
2440
2441	nc_stat = NF90_PUT_ATT( id_set_pr, id_var_dopr(i,j), &
2442	'units', TRIM( dopr_unit(i) ) )
2443	CALL handle_netcdf_error( 'netcdf', 234 )
2444
2445	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // &
2446	suffix // ';'
2447
2448	ENDDO
2449
2450	ENDIF
2451
2452	ENDDO
2453
2454	!
2455	!-- Write the list of variables as global attribute (this is used by
2456	!-- restart runs)
2457	nc_stat = NF90_PUT_ATT( id_set_pr, NF90_GLOBAL, 'VAR_LIST', var_list )
2458	CALL handle_netcdf_error( 'netcdf', 235 )
2459
2460	!
2461	!-- Define normalization variables (as time series)
2462	DO i = 1, dopr_norm_num
2463
2464	nc_stat = NF90_DEF_VAR( id_set_pr, 'NORM_' // &
2465	TRIM( dopr_norm_names(i) ), &
2466	nc_precision(5), (/ id_dim_time_pr /), &
2467	id_var_norm_dopr(i) )
2468	CALL handle_netcdf_error( 'netcdf', 236 )
2469
2470	nc_stat = NF90_PUT_ATT( id_set_pr, id_var_norm_dopr(i), &
2471	'long_name', &
2472	TRIM( dopr_norm_longnames(i) ) )
2473	CALL handle_netcdf_error( 'netcdf', 237 )
2474
2475	ENDDO
2476
2477	!
2478	!-- Leave NetCDF define mode
2479	nc_stat = NF90_ENDDEF( id_set_pr )
2480	CALL handle_netcdf_error( 'netcdf', 238 )
2481
2482	!
2483	!-- Write z-axes data
2484	DO i = 1, dopr_n
2485	DO j = 0, statistic_regions
2486
2487	nc_stat = NF90_PUT_VAR( id_set_pr, id_var_z_pr(i,j), &
2488	hom(nzb:nzt+1,2,dopr_index(i),0), &
2489	start = (/ 1 /), &
2490	count = (/ nzt-nzb+2 /) )
2491	CALL handle_netcdf_error( 'netcdf', 239 )
2492
2493	ENDDO
2494	ENDDO
2495
2496
2497	CASE ( 'pr_ext' )
2498
2499	!
2500	!-- Get the list of variables and compare with the actual run.
2501	!-- First var_list_old has to be reset, since GET_ATT does not assign
2502	!-- trailing blanks.
2503	var_list_old = ' '
2504	nc_stat = NF90_GET_ATT( id_set_pr, NF90_GLOBAL, 'VAR_LIST', &
2505	var_list_old )
2506	CALL handle_netcdf_error( 'netcdf', 240 )
2507
2508	var_list = ';'
2509	DO i = 1, dopr_n
2510
2511	netcdf_var_name = data_output_pr(i)
2512	CALL clean_netcdf_varname( netcdf_var_name )
2513
2514	IF ( statistic_regions == 0 ) THEN
2515	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // ';'
2516	ELSE
2517	DO j = 0, statistic_regions
2518	WRITE ( suffix, '(''_'',I1)' ) j
2519	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // &
2520	suffix // ';'
2521	ENDDO
2522	ENDIF
2523
2524	ENDDO
2525
2526	IF ( TRIM( var_list ) /= TRIM( var_list_old ) ) THEN
2527	message_string = 'NetCDF file for vertical profiles ' // &
2528	'from previuos run found,' // &
2529	'& but this file cannot be extended due to' // &
2530	' variable mismatch.' // &
2531	'&New file is created instead.'
2532	CALL message( 'define_netcdf_header', 'PA0254', 0, 1, 0, 6, 0 )
2533	extend = .FALSE.
2534	RETURN
2535	ENDIF
2536
2537	!
2538	!-- Get the id of the time coordinate (unlimited coordinate) and its
2539	!-- last index on the file. The next time level is dopr..count+1.
2540	!-- The current time must be larger than the last output time
2541	!-- on the file.
2542	nc_stat = NF90_INQ_VARID( id_set_pr, 'time', id_var_time_pr )
2543	CALL handle_netcdf_error( 'netcdf', 241 )
2544
2545	nc_stat = NF90_INQUIRE_VARIABLE( id_set_pr, id_var_time_pr, &
2546	dimids = id_dim_time_old )
2547	CALL handle_netcdf_error( 'netcdf', 242 )
2548	id_dim_time_pr = id_dim_time_old(1)
2549
2550	nc_stat = NF90_INQUIRE_DIMENSION( id_set_pr, id_dim_time_pr, &
2551	len = dopr_time_count )
2552	CALL handle_netcdf_error( 'netcdf', 243 )
2553
2554	nc_stat = NF90_GET_VAR( id_set_pr, id_var_time_pr, &
2555	last_time_coordinate, &
2556	start = (/ dopr_time_count /), &
2557	count = (/ 1 /) )
2558	CALL handle_netcdf_error( 'netcdf', 244 )
2559
2560	IF ( last_time_coordinate(1) >= simulated_time ) THEN
2561	message_string = 'NetCDF file for vertical profiles ' // &
2562	'from previuos run found,' // &
2563	'&but this file cannot be extended becaus' // &
2564	'e the current output time' // &
2565	'&is less or equal than the last output t' // &
2566	'ime on this file.' // &
2567	'&New file is created instead.'
2568	CALL message( 'define_netcdf_header', 'PA0255', 0, 1, 0, 6, 0 )
2569	dopr_time_count = 0
2570	extend = .FALSE.
2571	RETURN
2572	ENDIF
2573
2574	!
2575	!-- Dataset seems to be extendable.
2576	!-- Now get the variable ids.
2577	i = 1
2578	DO i = 1, dopr_n
2579
2580	netcdf_var_name_base = data_output_pr(i)
2581	CALL clean_netcdf_varname( netcdf_var_name_base )
2582
2583	IF ( statistic_regions == 0 ) THEN
2584	nc_stat = NF90_INQ_VARID( id_set_pr, netcdf_var_name_base, &
2585	id_var_dopr(i,0) )
2586	CALL handle_netcdf_error( 'netcdf', 245 )
2587	ELSE
2588	DO j = 0, statistic_regions
2589	WRITE ( suffix, '(''_'',I1)' ) j
2590	netcdf_var_name = TRIM( netcdf_var_name_base ) // suffix
2591	nc_stat = NF90_INQ_VARID( id_set_pr, netcdf_var_name, &
2592	id_var_dopr(i,j) )
2593	CALL handle_netcdf_error( 'netcdf', 246 )
2594	ENDDO
2595	ENDIF
2596
2597	ENDDO
2598
2599	!
2600	!-- Get ids of the normalization variables
2601	DO i = 1, dopr_norm_num
2602	nc_stat = NF90_INQ_VARID( id_set_pr, &
2603	'NORM_' // TRIM( dopr_norm_names(i) ), &
2604	id_var_norm_dopr(i) )
2605	CALL handle_netcdf_error( 'netcdf', 247 )
2606	ENDDO
2607
2608	!
2609	!-- Change the title attribute on file
2610	nc_stat = NF90_PUT_ATT( id_set_pr, NF90_GLOBAL, 'title', &
2611	TRIM( run_description_header ) )
2612	CALL handle_netcdf_error( 'netcdf', 248 )
2613	message_string = 'NetCDF file for vertical profiles ' // &
2614	'from previous run found.' // &
2615	'&This file will be extended.'
2616	CALL message( 'define_netcdf_header', 'PA0256', 0, 0, 0, 6, 0 )
2617
2618
2619	CASE ( 'ts_new' )
2620
2621	!
2622	!-- Define some global attributes of the dataset
2623	nc_stat = NF90_PUT_ATT( id_set_ts, NF90_GLOBAL, 'title', &
2624	TRIM( run_description_header ) )
2625	CALL handle_netcdf_error( 'netcdf', 249 )
2626
2627	!
2628	!-- Define time coordinate for time series (unlimited dimension)
2629	nc_stat = NF90_DEF_DIM( id_set_ts, 'time', NF90_UNLIMITED, &
2630	id_dim_time_ts )
2631	CALL handle_netcdf_error( 'netcdf', 250 )
2632
2633	nc_stat = NF90_DEF_VAR( id_set_ts, 'time', NF90_DOUBLE, &
2634	id_dim_time_ts, id_var_time_ts )
2635	CALL handle_netcdf_error( 'netcdf', 251 )
2636
2637	nc_stat = NF90_PUT_ATT( id_set_ts, id_var_time_ts, 'units', 'seconds')
2638	CALL handle_netcdf_error( 'netcdf', 252 )
2639
2640	!
2641	!-- Define the variables
2642	var_list = ';'
2643	DO i = 1, dots_num
2644	!
2645	!-- First, remove those characters not allowed by NetCDF
2646	netcdf_var_name = dots_label(i)
2647	CALL clean_netcdf_varname( netcdf_var_name )
2648
2649	IF ( statistic_regions == 0 ) THEN
2650
2651	nc_stat = NF90_DEF_VAR( id_set_ts, netcdf_var_name, &
2652	nc_precision(6), (/ id_dim_time_ts /), &
2653	id_var_dots(i,0) )
2654	CALL handle_netcdf_error( 'netcdf', 253 )
2655
2656	nc_stat = NF90_PUT_ATT( id_set_ts, id_var_dots(i,0), &
2657	'long_name', TRIM( dots_label(i) ) )
2658	CALL handle_netcdf_error( 'netcdf', 254 )
2659
2660	nc_stat = NF90_PUT_ATT( id_set_ts, id_var_dots(i,0), &
2661	'units', TRIM( dots_unit(i) ) )
2662	CALL handle_netcdf_error( 'netcdf', 255 )
2663
2664	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // ';'
2665
2666	ELSE
2667	!
2668	!-- If statistic regions are defined, add suffix _SR+#SR to the
2669	!-- names
2670	DO j = 0, statistic_regions
2671	WRITE ( suffix, '(''_'',I1)' ) j
2672
2673	nc_stat = NF90_DEF_VAR( id_set_ts, &
2674	TRIM( netcdf_var_name ) // suffix, &
2675	nc_precision(6), &
2676	(/ id_dim_time_ts /), &
2677	id_var_dots(i,j) )
2678	CALL handle_netcdf_error( 'netcdf', 256 )
2679
2680	nc_stat = NF90_PUT_ATT( id_set_ts, id_var_dots(i,j), &
2681	'long_name', &
2682	TRIM( dots_label(i) ) // ' SR ' // &
2683	suffix(2:2) )
2684	CALL handle_netcdf_error( 'netcdf', 257 )
2685
2686	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // &
2687	suffix // ';'
2688
2689	ENDDO
2690
2691	ENDIF
2692
2693	ENDDO
2694
2695	!
2696	!-- Write the list of variables as global attribute (this is used by
2697	!-- restart runs)
2698	nc_stat = NF90_PUT_ATT( id_set_ts, NF90_GLOBAL, 'VAR_LIST', var_list )
2699	CALL handle_netcdf_error( 'netcdf', 258 )
2700
2701	!
2702	!-- Leave NetCDF define mode
2703	nc_stat = NF90_ENDDEF( id_set_ts )
2704	CALL handle_netcdf_error( 'netcdf', 259 )
2705
2706
2707	CASE ( 'ts_ext' )
2708
2709	!
2710	!-- Get the list of variables and compare with the actual run.
2711	!-- First var_list_old has to be reset, since GET_ATT does not assign
2712	!-- trailing blanks.
2713	var_list_old = ' '
2714	nc_stat = NF90_GET_ATT( id_set_ts, NF90_GLOBAL, 'VAR_LIST', &
2715	var_list_old )
2716	CALL handle_netcdf_error( 'netcdf', 260 )
2717
2718	var_list = ';'
2719	i = 1
2720	DO i = 1, dots_num
2721
2722	netcdf_var_name = dots_label(i)
2723	CALL clean_netcdf_varname( netcdf_var_name )
2724
2725	IF ( statistic_regions == 0 ) THEN
2726	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // ';'
2727	ELSE
2728	DO j = 0, statistic_regions
2729	WRITE ( suffix, '(''_'',I1)' ) j
2730	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // &
2731	suffix // ';'
2732	ENDDO
2733	ENDIF
2734
2735	ENDDO
2736
2737	IF ( TRIM( var_list ) /= TRIM( var_list_old ) ) THEN
2738	message_string = 'NetCDF file for time series ' // &
2739	'from previuos run found,' // &
2740	'& but this file cannot be extended due to' // &
2741	' variable mismatch.' // &
2742	'&New file is created instead.'
2743	CALL message( 'define_netcdf_header', 'PA0257', 0, 1, 0, 6, 0 )
2744	extend = .FALSE.
2745	RETURN
2746	ENDIF
2747
2748	!
2749	!-- Get the id of the time coordinate (unlimited coordinate) and its
2750	!-- last index on the file. The next time level is dots..count+1.
2751	!-- The current time must be larger than the last output time
2752	!-- on the file.
2753	nc_stat = NF90_INQ_VARID( id_set_ts, 'time', id_var_time_ts )
2754	CALL handle_netcdf_error( 'netcdf', 261 )
2755
2756	nc_stat = NF90_INQUIRE_VARIABLE( id_set_ts, id_var_time_ts, &
2757	dimids = id_dim_time_old )
2758	CALL handle_netcdf_error( 'netcdf', 262 )
2759	id_dim_time_ts = id_dim_time_old(1)
2760
2761	nc_stat = NF90_INQUIRE_DIMENSION( id_set_ts, id_dim_time_ts, &
2762	len = dots_time_count )
2763	CALL handle_netcdf_error( 'netcdf', 263 )
2764
2765	nc_stat = NF90_GET_VAR( id_set_ts, id_var_time_ts, &
2766	last_time_coordinate, &
2767	start = (/ dots_time_count /), &
2768	count = (/ 1 /) )
2769	CALL handle_netcdf_error( 'netcdf', 264 )
2770
2771	IF ( last_time_coordinate(1) >= simulated_time ) THEN
2772	message_string = 'NetCDF file for time series ' // &
2773	'from previuos run found,' // &
2774	'&but this file cannot be extended becaus' // &
2775	'e the current output time' // &
2776	'&is less or equal than the last output t' // &
2777	'ime on this file.' // &
2778	'&New file is created instead.'
2779	CALL message( 'define_netcdf_header', 'PA0258', 0, 1, 0, 6, 0 )
2780	dots_time_count = 0
2781	extend = .FALSE.
2782	RETURN
2783	ENDIF
2784
2785	!
2786	!-- Dataset seems to be extendable.
2787	!-- Now get the variable ids
2788	i = 1
2789	DO i = 1, dots_num
2790
2791	netcdf_var_name_base = dots_label(i)
2792	CALL clean_netcdf_varname( netcdf_var_name_base )
2793
2794	IF ( statistic_regions == 0 ) THEN
2795	nc_stat = NF90_INQ_VARID( id_set_ts, netcdf_var_name_base, &
2796	id_var_dots(i,0) )
2797	CALL handle_netcdf_error( 'netcdf', 265 )
2798	ELSE
2799	DO j = 0, statistic_regions
2800	WRITE ( suffix, '(''_'',I1)' ) j
2801	netcdf_var_name = TRIM( netcdf_var_name_base ) // suffix
2802	nc_stat = NF90_INQ_VARID( id_set_ts, netcdf_var_name, &
2803	id_var_dots(i,j) )
2804	CALL handle_netcdf_error( 'netcdf', 266 )
2805	ENDDO
2806	ENDIF
2807
2808	ENDDO
2809
2810	!
2811	!-- Change the title attribute on file
2812	nc_stat = NF90_PUT_ATT( id_set_ts, NF90_GLOBAL, 'title', &
2813	TRIM( run_description_header ) )
2814	CALL handle_netcdf_error( 'netcdf', 267 )
2815	message_string = 'NetCDF file for time series ' // &
2816	'from previous run found.' // &
2817	'&This file will be extended.'
2818	CALL message( 'define_netcdf_header', 'PA0259', 0, 0, 0, 6, 0 )
2819
2820
2821	CASE ( 'sp_new' )
2822
2823	!
2824	!-- Define some global attributes of the dataset
2825	IF ( averaging_interval_sp /= 0.0 ) THEN
2826	WRITE (time_average_text,'('', '',F7.1,'' s average'')') &
2827	averaging_interval_sp
2828	nc_stat = NF90_PUT_ATT( id_set_sp, NF90_GLOBAL, 'title', &
2829	TRIM( run_description_header ) // &
2830	TRIM( time_average_text ) )
2831	CALL handle_netcdf_error( 'netcdf', 268 )
2832
2833	WRITE ( time_average_text,'(F7.1,'' s avg'')' ) averaging_interval_sp
2834	nc_stat = NF90_PUT_ATT( id_set_sp, NF90_GLOBAL, 'time_avg', &
2835	TRIM( time_average_text ) )
2836	ELSE
2837	nc_stat = NF90_PUT_ATT( id_set_sp, NF90_GLOBAL, 'title', &
2838	TRIM( run_description_header ) )
2839	ENDIF
2840	CALL handle_netcdf_error( 'netcdf', 269 )
2841
2842	!
2843	!-- Define time coordinate for spectra (unlimited dimension)
2844	nc_stat = NF90_DEF_DIM( id_set_sp, 'time', NF90_UNLIMITED, &
2845	id_dim_time_sp )
2846	CALL handle_netcdf_error( 'netcdf', 270 )
2847
2848	nc_stat = NF90_DEF_VAR( id_set_sp, 'time', NF90_DOUBLE, &
2849	id_dim_time_sp, id_var_time_sp )
2850	CALL handle_netcdf_error( 'netcdf', 271 )
2851
2852	nc_stat = NF90_PUT_ATT( id_set_sp, id_var_time_sp, 'units', 'seconds')
2853	CALL handle_netcdf_error( 'netcdf', 272 )
2854
2855	!
2856	!-- Define the spatial dimensions and coordinates for spectra.
2857	!-- First, determine the number of vertical levels for which spectra
2858	!-- are to be output.
2859	ns = 1
2860	DO WHILE ( comp_spectra_level(ns) /= 999999 .AND. ns <= 100 )
2861	ns = ns + 1
2862	ENDDO
2863	ns = ns - 1
2864
2865	!
2866	!-- Define vertical coordinate grid (zu grid)
2867	nc_stat = NF90_DEF_DIM( id_set_sp, 'zu_sp', ns, id_dim_zu_sp )
2868	CALL handle_netcdf_error( 'netcdf', 273 )
2869
2870	nc_stat = NF90_DEF_VAR( id_set_sp, 'zu_sp', NF90_DOUBLE, &
2871	id_dim_zu_sp, id_var_zu_sp )
2872	CALL handle_netcdf_error( 'netcdf', 274 )
2873
2874	nc_stat = NF90_PUT_ATT( id_set_sp, id_var_zu_sp, 'units', 'meters' )
2875	CALL handle_netcdf_error( 'netcdf', 275 )
2876
2877	!
2878	!-- Define vertical coordinate grid (zw grid)
2879	nc_stat = NF90_DEF_DIM( id_set_sp, 'zw_sp', ns, id_dim_zw_sp )
2880	CALL handle_netcdf_error( 'netcdf', 276 )
2881
2882	nc_stat = NF90_DEF_VAR( id_set_sp, 'zw_sp', NF90_DOUBLE, &
2883	id_dim_zw_sp, id_var_zw_sp )
2884	CALL handle_netcdf_error( 'netcdf', 277 )
2885
2886	nc_stat = NF90_PUT_ATT( id_set_sp, id_var_zw_sp, 'units', 'meters' )
2887	CALL handle_netcdf_error( 'netcdf', 278 )
2888
2889	!
2890	!-- Define x-axis
2891	nc_stat = NF90_DEF_DIM( id_set_sp, 'k_x', nx/2, id_dim_x_sp )
2892	CALL handle_netcdf_error( 'netcdf', 279 )
2893
2894	nc_stat = NF90_DEF_VAR( id_set_sp, 'k_x', NF90_DOUBLE, id_dim_x_sp, &
2895	id_var_x_sp )
2896	CALL handle_netcdf_error( 'netcdf', 280 )
2897
2898	nc_stat = NF90_PUT_ATT( id_set_sp, id_var_x_sp, 'units', 'm-1' )
2899	CALL handle_netcdf_error( 'netcdf', 281 )
2900
2901	!
2902	!-- Define y-axis
2903	nc_stat = NF90_DEF_DIM( id_set_sp, 'k_y', ny/2, id_dim_y_sp )
2904	CALL handle_netcdf_error( 'netcdf', 282 )
2905
2906	nc_stat = NF90_DEF_VAR( id_set_sp, 'k_y', NF90_DOUBLE, id_dim_y_sp, &
2907	id_var_y_sp )
2908	CALL handle_netcdf_error( 'netcdf', 283 )
2909
2910	nc_stat = NF90_PUT_ATT( id_set_sp, id_var_y_sp, 'units', 'm-1' )
2911	CALL handle_netcdf_error( 'netcdf', 284 )
2912
2913	!
2914	!-- Define the variables
2915	var_list = ';'
2916	i = 1
2917	DO WHILE ( data_output_sp(i) /= ' ' .AND. i <= 10 )
2918	!
2919	!-- First check for the vertical grid
2920	found = .TRUE.
2921	SELECT CASE ( data_output_sp(i) )
2922	!
2923	!-- Most variables are defined on the zu levels
2924	CASE ( 'e', 'p', 'pc', 'pr', 'pt', 'q', 'ql', 'ql_c', 'ql_v', &
2925	'ql_vp', 'qv', 'rho', 's', 'sa', 'u', 'v', 'vpt' )
2926
2927	grid_z = 'zu'
2928	!
2929	!-- zw levels
2930	CASE ( 'w' )
2931
2932	grid_z = 'zw'
2933
2934	CASE DEFAULT
2935	!
2936	!-- Check for user-defined quantities (found, grid_x and grid_y
2937	!-- are dummies)
2938	CALL user_define_netcdf_grid( data_output_sp(i), found, &
2939	grid_x, grid_y, grid_z )
2940
2941	END SELECT
2942
2943	IF ( INDEX( spectra_direction(i), 'x' ) /= 0 ) THEN
2944
2945	!
2946	!-- Define the variable
2947	netcdf_var_name = TRIM( data_output_sp(i) ) // '_x'
2948	CALL clean_netcdf_varname( netcdf_var_name )
2949	IF ( TRIM( grid_z ) == 'zw' ) THEN
2950	nc_stat = NF90_DEF_VAR( id_set_sp, netcdf_var_name, &
2951	nc_precision(7), (/ id_dim_x_sp, &
2952	id_dim_zw_sp, id_dim_time_sp /), &
2953	id_var_dospx(i) )
2954	ELSE
2955	nc_stat = NF90_DEF_VAR( id_set_sp, netcdf_var_name, &
2956	nc_precision(7), (/ id_dim_x_sp, &
2957	id_dim_zu_sp, id_dim_time_sp /), &
2958	id_var_dospx(i) )
2959	ENDIF
2960	CALL handle_netcdf_error( 'netcdf', 285 )
2961
2962	nc_stat = NF90_PUT_ATT( id_set_sp, id_var_dospx(i), &
2963	'long_name', netcdf_var_name )
2964	CALL handle_netcdf_error( 'netcdf', 286 )
2965
2966	nc_stat = NF90_PUT_ATT( id_set_sp, id_var_dospx(i), &
2967	'units', 'unknown' )
2968	CALL handle_netcdf_error( 'netcdf', 287 )
2969
2970	var_list = TRIM( var_list ) // TRIM( netcdf_var_name ) // ';'
2971
2972	ENDIF
2973
2974	IF ( INDEX( spectra_direction(i), 'y' ) /= 0 ) THEN
2975
2976	!
2977	!-- Define the variable
2978	netcdf_var_name = TRIM( data_output_sp(i) ) // '_y'
2979	CALL clean_netcdf_varname( netcdf_var_name )
2980	IF ( TRIM( grid_z ) == 'zw' ) THEN
2981	nc_stat = NF90_DEF_VAR( id_set_sp, netcdf_var_name, &
2982	nc_precision(7), (/ id_dim_y_sp, &
2983	id_dim_zw_sp, id_dim_time_sp /), &
2984	id_var_dospy(i) )
2985	ELSE
2986	nc_stat = NF90_DEF_VAR( id_set_sp, netcdf_var_name, &
2987	nc_precision(7), (/ id_dim_y_sp, &
2988	id_dim_zu_sp, id_dim_time_sp /), &
2989	id_var_dospy(i) )
2990	ENDIF
2991	CALL handle_netcdf_error( 'netcdf', 288 )
2992
2993	nc_stat = NF90_PUT_ATT( id_set_sp, id_var_dospy(i), &
2994	'long_name', netcdf_var_name )
2995	CALL handle_netcdf_error( 'netcdf', 289 )
2996
2997	nc_stat = NF90_PUT_ATT( id_set_sp, id_var_dospy(i), &
2998	'units', 'unknown' )
2999	CALL handle_netcdf_error( 'netcdf', 290 )
3000
3001	var_list = TRIM( var_list ) // TRIM( netcdf_var_name ) // ';'
3002
3003	ENDIF
3004
3005	i = i + 1
3006
3007	ENDDO
3008
3009	!
3010	!-- Write the list of variables as global attribute (this is used by
3011	!-- restart runs)
3012	nc_stat = NF90_PUT_ATT( id_set_sp, NF90_GLOBAL, 'VAR_LIST', var_list )
3013	CALL handle_netcdf_error( 'netcdf', 291 )
3014
3015	!
3016	!-- Leave NetCDF define mode
3017	nc_stat = NF90_ENDDEF( id_set_sp )
3018	CALL handle_netcdf_error( 'netcdf', 292 )
3019
3020	!
3021	!-- Write axis data: zu_sp, zw_sp, k_x, k_y
3022	ALLOCATE( netcdf_data(1:ns) )
3023
3024	!
3025	!-- Write zu data
3026	netcdf_data(1:ns) = zu( comp_spectra_level(1:ns) )
3027	nc_stat = NF90_PUT_VAR( id_set_sp, id_var_zu_sp, netcdf_data, &
3028	start = (/ 1 /), count = (/ ns /) )
3029	CALL handle_netcdf_error( 'netcdf', 293 )
3030
3031	!
3032	!-- Write zw data
3033	netcdf_data(1:ns) = zw( comp_spectra_level(1:ns) )
3034	nc_stat = NF90_PUT_VAR( id_set_sp, id_var_zw_sp, netcdf_data, &
3035	start = (/ 1 /), count = (/ ns /) )
3036	CALL handle_netcdf_error( 'netcdf', 294 )
3037
3038	DEALLOCATE( netcdf_data )
3039
3040	!
3041	!-- Write data for x and y axis (wavenumbers)
3042	ALLOCATE( netcdf_data(nx/2) )
3043	DO i = 1, nx/2
3044	netcdf_data(i) = 2.0 * pi * i / ( dx * ( nx + 1 ) )
3045	ENDDO
3046
3047	nc_stat = NF90_PUT_VAR( id_set_sp, id_var_x_sp, netcdf_data, &
3048	start = (/ 1 /), count = (/ nx/2 /) )
3049	CALL handle_netcdf_error( 'netcdf', 295 )
3050
3051	DEALLOCATE( netcdf_data )
3052
3053	ALLOCATE( netcdf_data(ny/2) )
3054	DO i = 1, ny/2
3055	netcdf_data(i) = 2.0 * pi * i / ( dy * ( ny + 1 ) )
3056	ENDDO
3057
3058	nc_stat = NF90_PUT_VAR( id_set_sp, id_var_y_sp, netcdf_data, &
3059	start = (/ 1 /), count = (/ ny/2 /) )
3060	CALL handle_netcdf_error( 'netcdf', 296 )
3061
3062	DEALLOCATE( netcdf_data )
3063
3064
3065	CASE ( 'sp_ext' )
3066
3067	!
3068	!-- Get the list of variables and compare with the actual run.
3069	!-- First var_list_old has to be reset, since GET_ATT does not assign
3070	!-- trailing blanks.
3071	var_list_old = ' '
3072	nc_stat = NF90_GET_ATT( id_set_sp, NF90_GLOBAL, 'VAR_LIST', &
3073	var_list_old )
3074	CALL handle_netcdf_error( 'netcdf', 297 )
3075	var_list = ';'
3076	i = 1
3077	DO WHILE ( data_output_sp(i) /= ' ' .AND. i <= 10 )
3078
3079	IF ( INDEX( spectra_direction(i), 'x' ) /= 0 ) THEN
3080	netcdf_var_name = TRIM( data_output_sp(i) ) // '_x'
3081	var_list = TRIM( var_list ) // TRIM( netcdf_var_name ) // ';'
3082	ENDIF
3083
3084	IF ( INDEX( spectra_direction(i), 'y' ) /= 0 ) THEN
3085	netcdf_var_name = TRIM( data_output_sp(i) ) // '_y'
3086	var_list = TRIM( var_list ) // TRIM( netcdf_var_name ) // ';'
3087	ENDIF
3088
3089	i = i + 1
3090
3091	ENDDO
3092
3093	IF ( TRIM( var_list ) /= TRIM( var_list_old ) ) THEN
3094	message_string = 'NetCDF file for spectra ' // &
3095	'from previuos run found,' // &
3096	'& but this file cannot be extended due to' // &
3097	' variable mismatch.' // &
3098	'&New file is created instead.'
3099	CALL message( 'define_netcdf_header', 'PA0260', 0, 1, 0, 6, 0 )
3100	extend = .FALSE.
3101	RETURN
3102	ENDIF
3103
3104	!
3105	!-- Determine the number of current vertical levels for which spectra
3106	!-- shall be output
3107	ns = 1
3108	DO WHILE ( comp_spectra_level(ns) /= 999999 .AND. ns <= 100 )
3109	ns = ns + 1
3110	ENDDO
3111	ns = ns - 1
3112
3113	!
3114	!-- Get and compare the number of vertical levels
3115	nc_stat = NF90_INQ_VARID( id_set_sp, 'zu_sp', id_var_zu_sp )
3116	CALL handle_netcdf_error( 'netcdf', 298 )
3117
3118	nc_stat = NF90_INQUIRE_VARIABLE( id_set_sp, id_var_zu_sp, &
3119	dimids = id_dim_zu_sp_old )
3120	CALL handle_netcdf_error( 'netcdf', 299 )
3121	id_dim_zu_sp = id_dim_zu_sp_old(1)
3122
3123	nc_stat = NF90_INQUIRE_DIMENSION( id_set_sp, id_dim_zu_sp, &
3124	len = ns_old )
3125	CALL handle_netcdf_error( 'netcdf', 300 )
3126
3127	IF ( ns /= ns_old ) THEN
3128	message_string = 'NetCDF file for spectra ' // &
3129	' from previuos run found,' // &
3130	'&but this file cannot be extended due to' // &
3131	' mismatch in number of' // &
3132	'&vertical levels.' // &
3133	'&New file is created instead.'
3134	CALL message( 'define_netcdf_header', 'PA0261', 0, 1, 0, 6, 0 )
3135	extend = .FALSE.
3136	RETURN
3137	ENDIF
3138
3139	!
3140	!-- Get and compare the heights of the cross sections
3141	ALLOCATE( netcdf_data(1:ns_old) )
3142
3143	nc_stat = NF90_GET_VAR( id_set_sp, id_var_zu_sp, netcdf_data )
3144	CALL handle_netcdf_error( 'netcdf', 301 )
3145
3146	DO i = 1, ns
3147	IF ( zu(comp_spectra_level(i)) /= netcdf_data(i) ) THEN
3148	message_string = 'NetCDF file for spectra ' // &
3149	' from previuos run found,' // &
3150	'&but this file cannot be extended due to' // &
3151	' mismatch in heights of' // &
3152	'&vertical levels.' // &
3153	'&New file is created instead.'
3154	CALL message( 'define_netcdf_header', 'PA0262', 0, 1, 0, 6, 0 )
3155	extend = .FALSE.
3156	RETURN
3157	ENDIF
3158	ENDDO
3159
3160	DEALLOCATE( netcdf_data )
3161
3162	!
3163	!-- Get the id of the time coordinate (unlimited coordinate) and its
3164	!-- last index on the file. The next time level is plsp..count+1.
3165	!-- The current time must be larger than the last output time
3166	!-- on the file.
3167	nc_stat = NF90_INQ_VARID( id_set_sp, 'time', id_var_time_sp )
3168	CALL handle_netcdf_error( 'netcdf', 302 )
3169
3170	nc_stat = NF90_INQUIRE_VARIABLE( id_set_sp, id_var_time_sp, &
3171	dimids = id_dim_time_old )
3172	CALL handle_netcdf_error( 'netcdf', 303 )
3173	id_dim_time_sp = id_dim_time_old(1)
3174
3175	nc_stat = NF90_INQUIRE_DIMENSION( id_set_sp, id_dim_time_sp, &
3176	len = dosp_time_count )
3177	CALL handle_netcdf_error( 'netcdf', 304 )
3178
3179	nc_stat = NF90_GET_VAR( id_set_sp, id_var_time_sp, &
3180	last_time_coordinate, &
3181	start = (/ dosp_time_count /), &
3182	count = (/ 1 /) )
3183	CALL handle_netcdf_error( 'netcdf', 305 )
3184
3185	IF ( last_time_coordinate(1) >= simulated_time ) THEN
3186	message_string = 'NetCDF file for spectra ' // &
3187	'from previuos run found,' // &
3188	'&but this file cannot be extended becaus' // &
3189	'e the current output time' // &
3190	'&is less or equal than the last output t' // &
3191	'ime on this file.' // &
3192	'&New file is created instead.'
3193	CALL message( 'define_netcdf_header', 'PA0263', 0, 1, 0, 6, 0 )
3194	dosp_time_count = 0
3195	extend = .FALSE.
3196	RETURN
3197	ENDIF
3198
3199	!
3200	!-- Dataset seems to be extendable.
3201	!-- Now get the variable ids.
3202	i = 1
3203	DO WHILE ( data_output_sp(i) /= ' ' .AND. i <= 10 )
3204
3205	IF ( INDEX( spectra_direction(i), 'x' ) /= 0 ) THEN
3206	netcdf_var_name = TRIM( data_output_sp(i) ) // '_x'
3207	nc_stat = NF90_INQ_VARID( id_set_sp, netcdf_var_name, &
3208	id_var_dospx(i) )
3209	CALL handle_netcdf_error( 'netcdf', 306 )
3210	ENDIF
3211
3212	IF ( INDEX( spectra_direction(i), 'y' ) /= 0 ) THEN
3213	netcdf_var_name = TRIM( data_output_sp(i) ) // '_y'
3214	nc_stat = NF90_INQ_VARID( id_set_sp, netcdf_var_name, &
3215	id_var_dospy(i) )
3216	CALL handle_netcdf_error( 'netcdf', 307 )
3217	ENDIF
3218
3219	i = i + 1
3220
3221	ENDDO
3222
3223	!
3224	!-- Change the titel attribute on file
3225	IF ( averaging_interval_sp /= 0.0 ) THEN
3226	WRITE (time_average_text,'('', '',F7.1,'' s average'')') &
3227	averaging_interval_sp
3228	nc_stat = NF90_PUT_ATT( id_set_sp, NF90_GLOBAL, 'title', &
3229	TRIM( run_description_header ) // &
3230	TRIM( time_average_text ) )
3231	CALL handle_netcdf_error( 'netcdf', 308 )
3232
3233	WRITE ( time_average_text,'(F7.1,'' s avg'')' ) averaging_interval_sp
3234	nc_stat = NF90_PUT_ATT( id_set_sp, NF90_GLOBAL, 'time_avg', &
3235	TRIM( time_average_text ) )
3236	ELSE
3237	nc_stat = NF90_PUT_ATT( id_set_sp, NF90_GLOBAL, 'title', &
3238	TRIM( run_description_header ) )
3239	ENDIF
3240	CALL handle_netcdf_error( 'netcdf', 309 )
3241	message_string = 'NetCDF file for spectra ' // &
3242	'from previous run found.' // &
3243	'&This file will be extended.'
3244	CALL message( 'define_netcdf_header', 'PA0264', 0, 0, 0, 6, 0 )
3245
3246
3247	CASE ( 'pt_new' )
3248
3249	!
3250	!-- Define some global attributes of the dataset
3251	nc_stat = NF90_PUT_ATT( id_set_prt, NF90_GLOBAL, 'title', &
3252	TRIM( run_description_header ) )
3253	CALL handle_netcdf_error( 'netcdf', 310 )
3254
3255	!
3256	!-- Define time coordinate for particles (unlimited dimension)
3257	nc_stat = NF90_DEF_DIM( id_set_prt, 'time', NF90_UNLIMITED, &
3258	id_dim_time_prt )
3259	CALL handle_netcdf_error( 'netcdf', 311 )
3260
3261	nc_stat = NF90_DEF_VAR( id_set_prt, 'time', NF90_DOUBLE, &
3262	id_dim_time_prt, id_var_time_prt )
3263	CALL handle_netcdf_error( 'netcdf', 312 )
3264
3265	nc_stat = NF90_PUT_ATT( id_set_prt, id_var_time_prt, 'units', &
3266	'seconds' )
3267	CALL handle_netcdf_error( 'netcdf', 313 )
3268
3269	!
3270	!-- Define particle coordinate (maximum particle number)
3271	nc_stat = NF90_DEF_DIM( id_set_prt, 'particle_number', &
3272	maximum_number_of_particles, id_dim_prtnum )
3273	CALL handle_netcdf_error( 'netcdf', 314 )
3274
3275	nc_stat = NF90_DEF_VAR( id_set_prt, 'particle_number', NF90_DOUBLE, &
3276	id_dim_prtnum, id_var_prtnum )
3277	CALL handle_netcdf_error( 'netcdf', 315 )
3278
3279	nc_stat = NF90_PUT_ATT( id_set_prt, id_var_prtnum, 'units', &
3280	'particle number' )
3281	CALL handle_netcdf_error( 'netcdf', 316 )
3282
3283	!
3284	!-- Define variable which contains the real number of particles in use
3285	nc_stat = NF90_DEF_VAR( id_set_prt, 'real_num_of_prt', NF90_INT, &
3286	id_dim_time_prt, id_var_rnop_prt )
3287	CALL handle_netcdf_error( 'netcdf', 317 )
3288
3289	nc_stat = NF90_PUT_ATT( id_set_prt, id_var_rnop_prt, 'units', &
3290	'particle number' )
3291	CALL handle_netcdf_error( 'netcdf', 318 )
3292
3293	!
3294	!-- Define the variables
3295	DO i = 1, 17
3296
3297	nc_stat = NF90_DEF_VAR( id_set_prt, prt_var_names(i), &
3298	nc_precision(8), &
3299	(/ id_dim_prtnum, id_dim_time_prt /), &
3300	id_var_prt(i) )
3301	CALL handle_netcdf_error( 'netcdf', 319 )
3302
3303	nc_stat = NF90_PUT_ATT( id_set_prt, id_var_prt(i), &
3304	'long_name', TRIM( prt_var_names(i) ) )
3305	CALL handle_netcdf_error( 'netcdf', 320 )
3306
3307	nc_stat = NF90_PUT_ATT( id_set_prt, id_var_prt(i), &
3308	'units', TRIM( prt_var_units(i) ) )
3309	CALL handle_netcdf_error( 'netcdf', 321 )
3310
3311	ENDDO
3312
3313	!
3314	!-- Leave NetCDF define mode
3315	nc_stat = NF90_ENDDEF( id_set_prt )
3316	CALL handle_netcdf_error( 'netcdf', 322 )
3317
3318
3319	CASE ( 'pt_ext' )
3320
3321	!
3322	!-- Get the id of the time coordinate (unlimited coordinate) and its
3323	!-- last index on the file. The next time level is prt..count+1.
3324	!-- The current time must be larger than the last output time
3325	!-- on the file.
3326	nc_stat = NF90_INQ_VARID( id_set_prt, 'time', id_var_time_prt )
3327	CALL handle_netcdf_error( 'netcdf', 323 )
3328
3329	nc_stat = NF90_INQUIRE_VARIABLE( id_set_prt, id_var_time_prt, &
3330	dimids = id_dim_time_old )
3331	CALL handle_netcdf_error( 'netcdf', 324 )
3332	id_dim_time_prt = id_dim_time_old(1)
3333
3334	nc_stat = NF90_INQUIRE_DIMENSION( id_set_prt, id_dim_time_prt, &
3335	len = prt_time_count )
3336	CALL handle_netcdf_error( 'netcdf', 325 )
3337
3338	nc_stat = NF90_GET_VAR( id_set_prt, id_var_time_prt, &
3339	last_time_coordinate, &
3340	start = (/ prt_time_count /), &
3341	count = (/ 1 /) )
3342	CALL handle_netcdf_error( 'netcdf', 326 )
3343
3344	IF ( last_time_coordinate(1) >= simulated_time ) THEN
3345	message_string = 'NetCDF file for particles ' // &
3346	'from previuos run found,' // &
3347	'&but this file cannot be extended becaus' // &
3348	'e the current output time' // &
3349	'&is less or equal than the last output t' // &
3350	'ime on this file.' // &
3351	'&New file is created instead.'
3352	CALL message( 'define_netcdf_header', 'PA0265', 0, 1, 0, 6, 0 )
3353	prt_time_count = 0
3354	extend = .FALSE.
3355	RETURN
3356	ENDIF
3357
3358	!
3359	!-- Dataset seems to be extendable.
3360	!-- Now get the variable ids.
3361	nc_stat = NF90_INQ_VARID( id_set_prt, 'real_num_of_prt', &
3362	id_var_rnop_prt )
3363	CALL handle_netcdf_error( 'netcdf', 327 )
3364
3365	DO i = 1, 17
3366
3367	nc_stat = NF90_INQ_VARID( id_set_prt, prt_var_names(i), &
3368	id_var_prt(i) )
3369	CALL handle_netcdf_error( 'netcdf', 328 )
3370
3371	ENDDO
3372
3373	message_string = 'NetCDF file for particles ' // &
3374	'from previous run found.' // &
3375	'&This file will be extended.'
3376	CALL message( 'define_netcdf_header', 'PA0266', 0, 0, 0, 6, 0 )
3377
3378
3379
3380	CASE ( 'ps_new' )
3381
3382	!
3383	!-- Define some global attributes of the dataset
3384	nc_stat = NF90_PUT_ATT( id_set_pts, NF90_GLOBAL, 'title', &
3385	TRIM( run_description_header ) )
3386	CALL handle_netcdf_error( 'netcdf', 396 )
3387
3388	!
3389	!-- Define time coordinate for particle time series (unlimited dimension)
3390	nc_stat = NF90_DEF_DIM( id_set_pts, 'time', NF90_UNLIMITED, &
3391	id_dim_time_pts )
3392	CALL handle_netcdf_error( 'netcdf', 397 )
3393
3394	nc_stat = NF90_DEF_VAR( id_set_pts, 'time', NF90_DOUBLE, &
3395	id_dim_time_pts, id_var_time_pts )
3396	CALL handle_netcdf_error( 'netcdf', 398 )
3397
3398	nc_stat = NF90_PUT_ATT( id_set_pts, id_var_time_pts, 'units', &
3399	'seconds')
3400	CALL handle_netcdf_error( 'netcdf', 399 )
3401
3402	!
3403	!-- Define the variables. If more than one particle group is defined,
3404	!-- define seperate variables for each group
3405	var_list = ';'
3406	DO i = 1, dopts_num
3407
3408	!
3409	!-- First, remove those characters not allowed by NetCDF
3410	netcdf_var_name = dopts_label(i)
3411	CALL clean_netcdf_varname( netcdf_var_name )
3412
3413	DO j = 0, number_of_particle_groups
3414
3415	IF ( j == 0 ) THEN
3416	suffix1 = ''
3417	ELSE
3418	WRITE ( suffix1, '(''_'',I2.2)' ) j
3419	ENDIF
3420
3421	nc_stat = NF90_DEF_VAR( id_set_pts, &
3422	TRIM( netcdf_var_name ) // suffix1, &
3423	nc_precision(6), &
3424	(/ id_dim_time_pts /), &
3425	id_var_dopts(i,j) )
3426	CALL handle_netcdf_error( 'netcdf', 400 )
3427
3428	IF ( j == 0 ) THEN
3429	nc_stat = NF90_PUT_ATT( id_set_pts, id_var_dopts(i,j), &
3430	'long_name', &
3431	TRIM( dopts_label(i) ) )
3432	ELSE
3433	nc_stat = NF90_PUT_ATT( id_set_pts, id_var_dopts(i,j), &
3434	'long_name', &
3435	TRIM( dopts_label(i) ) // ' PG ' // &
3436	suffix1(2:3) )
3437	ENDIF
3438	CALL handle_netcdf_error( 'netcdf', 401 )
3439
3440	nc_stat = NF90_PUT_ATT( id_set_pts, id_var_dopts(i,j), &
3441	'units', TRIM( dopts_unit(i) ) )
3442	CALL handle_netcdf_error( 'netcdf', 402 )
3443
3444	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // &
3445	suffix1 // ';'
3446
3447	IF ( number_of_particle_groups == 1 ) EXIT
3448
3449	ENDDO
3450
3451	ENDDO
3452
3453	!
3454	!-- Write the list of variables as global attribute (this is used by
3455	!-- restart runs)
3456	nc_stat = NF90_PUT_ATT( id_set_pts, NF90_GLOBAL, 'VAR_LIST', &
3457	var_list )
3458	CALL handle_netcdf_error( 'netcdf', 403 )
3459
3460
3461	!
3462	!-- Leave NetCDF define mode
3463	nc_stat = NF90_ENDDEF( id_set_pts )
3464	CALL handle_netcdf_error( 'netcdf', 404 )
3465
3466
3467	CASE ( 'ps_ext' )
3468
3469	!
3470	!-- Get the list of variables and compare with the actual run.
3471	!-- First var_list_old has to be reset, since GET_ATT does not assign
3472	!-- trailing blanks.
3473	var_list_old = ' '
3474	nc_stat = NF90_GET_ATT( id_set_pts, NF90_GLOBAL, 'VAR_LIST', &
3475	var_list_old )
3476	CALL handle_netcdf_error( 'netcdf', 405 )
3477
3478	var_list = ';'
3479	i = 1
3480	DO i = 1, dopts_num
3481
3482	netcdf_var_name = dopts_label(i)
3483	CALL clean_netcdf_varname( netcdf_var_name )
3484
3485	DO j = 0, number_of_particle_groups
3486
3487	IF ( j == 0 ) THEN
3488	suffix1 = ''
3489	ELSE
3490	WRITE ( suffix1, '(''_'',I2.2)' ) j
3491	ENDIF
3492
3493	var_list = TRIM(var_list) // TRIM(netcdf_var_name) // &
3494	suffix1 // ';'
3495
3496	IF ( number_of_particle_groups == 1 ) EXIT
3497
3498	ENDDO
3499
3500	ENDDO
3501
3502	IF ( TRIM( var_list ) /= TRIM( var_list_old ) ) THEN
3503	message_string = 'NetCDF file for particle time series ' // &
3504	'from previuos run found,' // &
3505	'& but this file cannot be extended due to' // &
3506	' variable mismatch.' // &
3507	'&New file is created instead.'
3508	CALL message( 'define_netcdf_header', 'PA0267', 0, 1, 0, 6, 0 )
3509	extend = .FALSE.
3510	RETURN
3511	ENDIF
3512
3513	!
3514	!-- Get the id of the time coordinate (unlimited coordinate) and its
3515	!-- last index on the file. The next time level is dots..count+1.
3516	!-- The current time must be larger than the last output time
3517	!-- on the file.
3518	nc_stat = NF90_INQ_VARID( id_set_pts, 'time', id_var_time_pts )
3519	CALL handle_netcdf_error( 'netcdf', 406 )
3520
3521	nc_stat = NF90_INQUIRE_VARIABLE( id_set_pts, id_var_time_pts, &
3522	dimids = id_dim_time_old )
3523	CALL handle_netcdf_error( 'netcdf', 407 )
3524	id_dim_time_pts = id_dim_time_old(1)
3525
3526	nc_stat = NF90_INQUIRE_DIMENSION( id_set_pts, id_dim_time_pts, &
3527	len = dopts_time_count )
3528	CALL handle_netcdf_error( 'netcdf', 408 )
3529
3530	nc_stat = NF90_GET_VAR( id_set_pts, id_var_time_pts, &
3531	last_time_coordinate, &
3532	start = (/ dopts_time_count /), &
3533	count = (/ 1 /) )
3534	CALL handle_netcdf_error( 'netcdf', 409 )
3535
3536	IF ( last_time_coordinate(1) >= simulated_time ) THEN
3537	message_string = 'NetCDF file for particle time series ' // &
3538	'from previuos run found,' // &
3539	'&but this file cannot be extended becaus' // &
3540	'e the current output time' // &
3541	'&is less or equal than the last output t' // &
3542	'ime on this file.' // &
3543	'&New file is created instead.'
3544	CALL message( 'define_netcdf_header', 'PA0268', 0, 1, 0, 6, 0 )
3545	dopts_time_count = 0
3546	extend = .FALSE.
3547	RETURN
3548	ENDIF
3549
3550	!
3551	!-- Dataset seems to be extendable.
3552	!-- Now get the variable ids
3553	i = 1
3554	DO i = 1, dopts_num
3555
3556	netcdf_var_name_base = dopts_label(i)
3557	CALL clean_netcdf_varname( netcdf_var_name_base )
3558
3559	DO j = 0, number_of_particle_groups
3560
3561	IF ( j == 0 ) THEN
3562	suffix1 = ''
3563	ELSE
3564	WRITE ( suffix1, '(''_'',I2.2)' ) j
3565	ENDIF
3566
3567	netcdf_var_name = TRIM( netcdf_var_name_base ) // suffix1
3568
3569	nc_stat = NF90_INQ_VARID( id_set_pts, netcdf_var_name, &
3570	id_var_dopts(i,j) )
3571	CALL handle_netcdf_error( 'netcdf', 410 )
3572
3573	IF ( number_of_particle_groups == 1 ) EXIT
3574
3575	ENDDO
3576
3577	ENDDO
3578
3579	!
3580	!-- Change the title attribute on file
3581	nc_stat = NF90_PUT_ATT( id_set_pts, NF90_GLOBAL, 'title', &
3582	TRIM( run_description_header ) )
3583	CALL handle_netcdf_error( 'netcdf', 411 )
3584	message_string = 'NetCDF file for particle time series ' // &
3585	'from previous run found.' // &
3586	'&This file will be extended.'
3587	CALL message( 'define_netcdf_header', 'PA0269', 0, 0, 0, 6, 0 )
3588
3589
3590	CASE DEFAULT
3591
3592	message_string = 'mode "' // TRIM( mode) // '" not supported'
3593	CALL message( 'define_netcdf_header', 'PA0270', 0, 0, 0, 6, 0 )
3594
3595	END SELECT
3596
3597	#endif
3598	END SUBROUTINE define_netcdf_header
3599
3600
3601	SUBROUTINE handle_netcdf_error( routine_name, errno )
3602	#if defined( __netcdf )
3603
3604	!------------------------------------------------------------------------------!
3605	!
3606	! Description:
3607	! ------------
3608	! Prints out a text message corresponding to the current status.
3609	!------------------------------------------------------------------------------!
3610
3611	USE control_parameters
3612	USE netcdf
3613	USE netcdf_control
3614	USE pegrid
3615
3616	IMPLICIT NONE
3617
3618	CHARACTER(LEN=6) :: message_identifier
3619	CHARACTER(LEN=*) :: routine_name
3620
3621	INTEGER :: errno
3622
3623	IF ( nc_stat /= NF90_NOERR ) THEN
3624
3625	WRITE( message_identifier, '(''NC'',I4.4)' ) errno
3626	message_string = TRIM( NF90_STRERROR( nc_stat ) )
3627
3628	CALL message( routine_name, message_identifier, 2, 2, -1, 6, 1 )
3629
3630	ENDIF
3631
3632	#endif
3633	END SUBROUTINE handle_netcdf_error
3634
3635
3636
3637	SUBROUTINE clean_netcdf_varname( string )
3638	#if defined( __netcdf )
3639
3640	!------------------------------------------------------------------------------!
3641	!
3642	! Description:
3643	! ------------
3644	! Replace those characters in string which are not allowed by NetCDF.
3645	!------------------------------------------------------------------------------!
3646
3647	USE netcdf_control
3648
3649	IMPLICIT NONE
3650
3651	CHARACTER (LEN=10), INTENT(INOUT) :: string
3652
3653	INTEGER :: i, ic
3654
3655	DO i = 1, replace_num
3656	DO
3657	ic = INDEX( string, replace_char(i) )
3658	IF ( ic /= 0 ) THEN
3659	string(ic:ic) = replace_by(i)
3660	ELSE
3661	EXIT
3662	ENDIF
3663	ENDDO
3664	ENDDO
3665
3666	#endif
3667	END SUBROUTINE clean_netcdf_varname

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