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source: palm/trunk/SOURCE/init_masks.f90 @ 4670

Last change on this file since 4670 was 4648, checked in by raasch, 4 years ago
files re-formatted to follow the PALM coding standard
Property svn:keywords set to `Id`
File size: 33.6 KB

Rev	Line
[1682]	1	!> @file init_masks.f90
[4648]	2	!--------------------------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1036]	4	!
[4648]	5	! PALM is free software: you can redistribute it and/or modify it under the terms of the GNU General
	6	! Public License as published by the Free Software Foundation, either version 3 of the License, or
	7	! (at your option) any later version.
[1036]	8	!
[4648]	9	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the
	10	! implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
	11	! Public License for more details.
[1036]	12	!
[4648]	13	! You should have received a copy of the GNU General Public License along with PALM. If not, see
	14	! <http://www.gnu.org/licenses/>.
[1036]	15	!
[4360]	16	! Copyright 1997-2020 Leibniz Universitaet Hannover
[4648]	17	!--------------------------------------------------------------------------------------------------!
[1036]	18	!
[484]	19	! Current revisions:
[298]	20	! -----------------
[4648]	21	!
	22	!
[1321]	23	! Former revisions:
	24	! -----------------
	25	! $Id: init_masks.f90 4648 2020-08-25 07:52:08Z maronga $
[4648]	26	! file re-formatted to follow the PALM coding standard
	27	!
	28	! 4521 2020-05-06 11:39:49Z schwenkel
[4521]	29	! Rename variable
[4648]	30	!
[4521]	31	! 4502 2020-04-17 16:14:16Z schwenkel
[4502]	32	! Implementation of ice microphysics
[4648]	33	!
[4502]	34	! 4444 2020-03-05 15:59:50Z raasch
[4444]	35	! bugfix: cpp-directives for serial mode added
[4648]	36	!
[4444]	37	! 4360 2020-01-07 11:25:50Z suehring
[4182]	38	! Corrected "Former revisions" section
[4648]	39	!
[4182]	40	! 4069 2019-07-01 14:05:51Z Giersch
[4648]	41	! Masked output running index mid has been introduced as a local variable to avoid runtime error
	42	! (Loop variable has been modified) in time_integration
	43	!
[4069]	44	! 3766 2019-02-26 16:23:41Z raasch
[3665]	45	! unused variables removed
[4648]	46	!
[3766]	47	! 3687 2019-01-22 10:42:06Z knoop
	48	! unused variables removed
[4648]	49	!
[3665]	50	! 3655 2019-01-07 16:51:22Z knoop
[4648]	51	! Move the control parameter "salsa" from salsa_mod to control_parameters (M. Kurppa)
[2716]	52	!
[4182]	53	! 410 2009-12-04 17:05:40Z letzel
	54	! Initial revision
	55	!
	56	!
[298]	57	! Description:
	58	! ------------
[1682]	59	!> Initialize masked data output
[4648]	60	!--------------------------------------------------------------------------------------------------!
[1682]	61	SUBROUTINE init_masks
[298]	62
[4648]	63	USE arrays_3d, &
[1320]	64	ONLY: zu, zw
	65
[4648]	66	USE bulk_cloud_model_mod, &
	67	ONLY: bulk_cloud_model, microphysics_ice_phase, microphysics_morrison, &
	68	microphysics_seifert
[3435]	69
[1320]	70
[4648]	71	USE control_parameters, &
	72	ONLY: constant_diffusion, cloud_droplets, data_output_masks, data_output_masks_user, doav,&
	73	doav_n, domask, domask_no, dz, dz_stretch_level_start, humidity, mask, masks, &
	74	mask_scale, mask_i, mask_i_global, mask_j, mask_j_global, mask_k, mask_k_global, &
	75	mask_k_over_surface, mask_loop, mask_size, mask_size_l, mask_start_l, mask_surface, &
	76	mask_x, mask_x_loop, mask_xyz_dimension, mask_y, mask_y_loop, mask_z, mask_z_loop, &
	77	max_masks, message_string, passive_scalar, ocean_mode, varnamelength
	78
	79	USE grid_variables, &
[1320]	80	ONLY: dx, dy
	81
[4648]	82	USE indices, &
[1320]	83	ONLY: nx, nxl, nxr, ny, nyn, nys, nz, nzb, nzt
	84
	85	USE kinds
	86
[4648]	87	USE module_interface, &
[3687]	88	ONLY: module_interface_init_masks
	89
[4648]	90	USE netcdf_interface, &
[1783]	91	ONLY: domask_unit, netcdf_data_format
[1320]	92
[4648]	93	USE particle_attributes, &
[1320]	94	ONLY: particle_advection
	95
[3687]	96	USE pegrid
[3435]	97
[298]	98	IMPLICIT NONE
	99
[3554]	100	CHARACTER (LEN=varnamelength) :: var !< contains variable name
	101	CHARACTER (LEN=7) :: unit !< contains unit of variable
[4648]	102
[3554]	103	CHARACTER (LEN=varnamelength), DIMENSION(max_masks,100) :: do_mask !< list of output variables
	104	CHARACTER (LEN=varnamelength), DIMENSION(max_masks,100) :: do_mask_user !< list of user-specified output variables
[298]	105
[3435]	106	INTEGER(iwp) :: count !< counting masking indices along a dimension
[3554]	107	INTEGER(iwp) :: i !< loop index
	108	INTEGER(iwp) :: ilen !< length of string saved in 'do_mask'
	109	INTEGER(iwp) :: ind_array(1) !< array index
	110	INTEGER(iwp) :: j !< loop index
	111	INTEGER(iwp) :: k !< loop index
[3435]	112	INTEGER(iwp) :: m !< mask index
[4069]	113	INTEGER(iwp) :: mid !< masked output running index
[4444]	114	#if defined( __parallel )
	115	INTEGER(iwp) :: ind(6) !< index limits (lower/upper bounds) of output array
[3554]	116	INTEGER(iwp) :: n !< loop index
	117	INTEGER(iwp) :: sender !< PE id of sending PE
[4444]	118	#endif
[4648]	119
[3554]	120	INTEGER(iwp), DIMENSION(:), ALLOCATABLE :: tmp_array !< temporary 1D array
[298]	121
[3554]	122	LOGICAL :: found !< true if variable is found
[2344]	123
[298]	124	!
[4648]	125	!-- Initial values are explicitly set here due to a bug in the Cray compiler in case of assignments
	126	!-- of initial values in declaration statements for arrays with more than 9999 elements
	127	!-- (appears with -eD only)
[2344]	128	domask = ' '
	129
	130	!
[298]	131	!-- Allocation and initialization
[1414]	132	ALLOCATE( tmp_array( MAX(nx,ny,nz)+2 ) )
[298]	133
[4648]	134	ALLOCATE( mask_i(max_masks,nxr-nxl+2), &
	135	mask_j(max_masks,nyn-nys+2), &
[1414]	136	mask_k(max_masks,nzt-nzb+2) )
[298]	137	!
	138	!-- internal mask arrays ("mask,dimension,selection")
[4648]	139	ALLOCATE( mask(max_masks,3,mask_xyz_dimension), mask_loop(max_masks,3,3) )
	140
[298]	141	!
[4648]	142	!-- Parallel mask output not yet supported. In check_parameters data format is restricted and is
	143	!-- switched back to non-parallel output. Therefore the following error can not occur at the moment.
[1031]	144	IF ( netcdf_data_format > 4 ) THEN
[4648]	145	message_string = 'netCDF file formats '// &
	146	'5 and 6 (with parallel I/O support)'// &
[3045]	147	' are currently not supported.'
[564]	148	CALL message( 'init_masks', 'PA0328', 1, 2, 0, 6, 0 )
[298]	149	ENDIF
[553]	150
[298]	151	!
	152	!-- Store data output parameters for masked data output in few shared arrays
[996]	153	DO mid = 1, masks
[4648]	154
[553]	155	do_mask (mid,:) = data_output_masks(mid,:)
	156	do_mask_user(mid,:) = data_output_masks_user(mid,:)
[4648]	157	mask (mid,1,:) = mask_x(mid,:)
[553]	158	mask (mid,2,:) = mask_y(mid,:)
[4648]	159	mask (mid,3,:) = mask_z(mid,:)
[3435]	160	!
	161	!-- Flag a mask as terrain following
	162	IF ( mask_k_over_surface(mid,1) /= -1_iwp ) THEN
	163	mask_surface(mid) = .TRUE.
	164	ENDIF
	165
[4648]	166	IF ( mask_x_loop(mid,1) == -1.0_wp .AND. mask_x_loop(mid,2) == -1.0_wp .AND. &
	167	mask_x_loop(mid,3) == -1.0_wp ) THEN
[1353]	168	mask_loop(mid,1,1:2) = -1.0_wp
	169	mask_loop(mid,1,3) = 0.0_wp
[564]	170	ELSE
	171	mask_loop(mid,1,:) = mask_x_loop(mid,:)
	172	ENDIF
[4648]	173	IF ( mask_y_loop(mid,1) == -1.0_wp .AND. mask_y_loop(mid,2) == -1.0_wp .AND. &
	174	mask_y_loop(mid,3) == -1.0_wp ) THEN
[1353]	175	mask_loop(mid,2,1:2) = -1.0_wp
	176	mask_loop(mid,2,3) = 0.0_wp
[564]	177	ELSE
	178	mask_loop(mid,2,:) = mask_y_loop(mid,:)
	179	ENDIF
[4648]	180	IF ( mask_z_loop(mid,1) == -1.0_wp .AND. mask_z_loop(mid,2) == -1.0_wp .AND. &
	181	mask_z_loop(mid,3) == -1.0_wp ) THEN
[1353]	182	mask_loop(mid,3,1:2) = -1.0_wp
	183	mask_loop(mid,3,3) = 0.0_wp
[564]	184	ELSE
	185	mask_loop(mid,3,:) = mask_z_loop(mid,:)
	186	ENDIF
[4648]	187
[553]	188	ENDDO
[4648]	189
[298]	190	mask_i = -1; mask_j = -1; mask_k = -1
[4648]	191
[298]	192	!
	193	!-- Global arrays are required by define_netcdf_header.
[1031]	194	IF ( myid == 0 .OR. netcdf_data_format > 4 ) THEN
[4648]	195	ALLOCATE( mask_i_global(max_masks,nx+2), &
	196	mask_j_global(max_masks,ny+2), &
[1414]	197	mask_k_global(max_masks,nz+2) )
[298]	198	mask_i_global = -1; mask_j_global = -1; mask_k_global = -1
	199	ENDIF
	200
	201	!
	202	!-- Determine variable names for each mask
	203	DO mid = 1, masks
	204	!
	205	!-- Append user-defined data output variables to the standard data output
	206	IF ( do_mask_user(mid,1) /= ' ' ) THEN
	207	i = 1
	208	DO WHILE ( do_mask(mid,i) /= ' ' .AND. i <= 100 )
	209	i = i + 1
	210	ENDDO
	211	j = 1
	212	DO WHILE ( do_mask_user(mid,j) /= ' ' .AND. j <= 100 )
	213	IF ( i > 100 ) THEN
[4648]	214	WRITE ( message_string, * ) 'number of output quantitities ', &
	215	'given by data_output_mask and data_output_mask_user ',&
	216	'exceeds the limit of 100'
[564]	217	CALL message( 'init_masks', 'PA0329', 1, 2, 0, 6, 0 )
[298]	218	ENDIF
	219	do_mask(mid,i) = do_mask_user(mid,j)
	220	i = i + 1
	221	j = j + 1
	222	ENDDO
	223	ENDIF
	224
	225	!
	226	!-- Check and set steering parameters for mask data output and averaging
	227	i = 1
[996]	228	DO WHILE ( do_mask(mid,i) /= ' ' .AND. i <= 100 )
[298]	229	!
	230	!-- Check for data averaging
	231	ilen = LEN_TRIM( do_mask(mid,i) )
	232	j = 0 ! no data averaging
	233	IF ( ilen > 3 ) THEN
	234	IF ( do_mask(mid,i)(ilen-2:ilen) == '_av' ) THEN
	235	j = 1 ! data averaging
	236	do_mask(mid,i) = do_mask(mid,i)(1:ilen-3)
	237	ENDIF
	238	ENDIF
	239	var = TRIM( do_mask(mid,i) )
	240	!
	241	!-- Check for allowed value and set units
	242	SELECT CASE ( TRIM( var ) )
	243
	244	CASE ( 'e' )
	245	IF ( constant_diffusion ) THEN
[4648]	246	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	247	'" requires constant_diffusion = .FALSE.'
[564]	248	CALL message( 'init_masks', 'PA0103', 1, 2, 0, 6, 0 )
[298]	249	ENDIF
	250	unit = 'm2/s2'
	251
[3421]	252	CASE ( 'thetal' )
[3274]	253	IF ( .NOT. bulk_cloud_model ) THEN
[4648]	254	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	255	'" requires bulk_cloud_model = .TRUE.'
[773]	256	CALL message( 'init_masks', 'PA0108', 1, 2, 0, 6, 0 )
[771]	257	ENDIF
	258	unit = 'K'
	259
[2292]	260	CASE ( 'nc' )
[3274]	261	IF ( .NOT. bulk_cloud_model ) THEN
[4648]	262	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	263	'" requires bulk_cloud_model = .TRUE.'
[2292]	264	CALL message( 'init_masks', 'PA0108', 1, 2, 0, 6, 0 )
[4648]	265	ELSEIF ( .NOT. microphysics_morrison ) THEN
	266	message_string = 'output of "' // TRIM( var ) // '" ' // 'requires = morrison'
[2292]	267	CALL message( 'check_parameters', 'PA0359', 1, 2, 0, 6, 0 )
	268	ENDIF
	269	unit = '1/m3'
	270
[4502]	271	CASE ( 'ni' )
	272	IF ( .NOT. bulk_cloud_model ) THEN
[4648]	273	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	274	'" requires bulk_cloud_model = .TRUE.'
[4502]	275	CALL message( 'init_masks', 'PA0108', 1, 2, 0, 6, 0 )
[4648]	276	ELSEIF ( .NOT. microphysics_ice_phase ) THEN
	277	message_string = 'output of "' // TRIM( var ) // '" ' // &
	278	'requires microphysics_ice_phase = .TRUE.'
[4502]	279	CALL message( 'check_parameters', 'PA0359', 1, 2, 0, 6, 0 )
	280	ENDIF
	281	unit = '1/m3'
	282
[1438]	283	CASE ( 'nr' )
[3274]	284	IF ( .NOT. bulk_cloud_model ) THEN
[4648]	285	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	286	'" requires bulk_cloud_model = .TRUE.'
[1438]	287	CALL message( 'init_masks', 'PA0108', 1, 2, 0, 6, 0 )
[4648]	288	ELSEIF ( .NOT. microphysics_seifert ) THEN
	289	message_string = 'output of "' // TRIM( var ) // '"' // &
	290	'requires cloud_scheme = seifert_beheng'
[1438]	291	CALL message( 'check_parameters', 'PA0359', 1, 2, 0, 6, 0 )
	292	ENDIF
	293	unit = '1/m3'
	294
[298]	295	CASE ( 'pc', 'pr' )
	296	IF ( .NOT. particle_advection ) THEN
[4648]	297	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	298	'" requires a "particles_par"-NAMELIST in the ', &
	299	'parameter file (PARIN)'
[564]	300	CALL message( 'init_masks', 'PA0104', 1, 2, 0, 6, 0 )
[298]	301	ENDIF
	302	IF ( TRIM( var ) == 'pc' ) unit = 'number'
	303	IF ( TRIM( var ) == 'pr' ) unit = 'm'
	304
[3421]	305	CASE ( 'q', 'thetav' )
[298]	306	IF ( .NOT. humidity ) THEN
[4648]	307	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	308	'" requires humidity = .TRUE.'
[564]	309	CALL message( 'init_masks', 'PA0105', 1, 2, 0, 6, 0 )
[298]	310	ENDIF
	311	IF ( TRIM( var ) == 'q' ) unit = 'kg/kg'
[3421]	312	IF ( TRIM( var ) == 'thetav' ) unit = 'K'
[298]	313
[1438]	314	CASE ( 'qc' )
[3274]	315	IF ( .NOT. bulk_cloud_model ) THEN
[4648]	316	message_string = 'output of "' // TRIM( var ) // '"' // &
	317	'requires bulk_cloud_model = .TRUE.'
[1438]	318	CALL message( 'check_parameters', 'PA0108', 1, 2, 0, 6, 0 )
	319	ENDIF
	320	unit = 'kg/kg'
	321
[298]	322	CASE ( 'ql' )
[3274]	323	IF ( .NOT. ( bulk_cloud_model .OR. cloud_droplets ) ) THEN
[4648]	324	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	325	'" requires bulk_cloud_model = .TRUE. or ', &
	326	'cloud_droplets = .TRUE.'
[3045]	327	CALL message( 'init_masks', 'PA0106', 1, 2, 0, 6, 0 )
[298]	328	ENDIF
	329	unit = 'kg/kg'
	330
	331	CASE ( 'ql_c', 'ql_v', 'ql_vp' )
	332	IF ( .NOT. cloud_droplets ) THEN
[4648]	333	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	334	'" requires cloud_droplets = .TRUE.'
[564]	335	CALL message( 'init_masks', 'PA0107', 1, 2, 0, 6, 0 )
[298]	336	ENDIF
	337	IF ( TRIM( var ) == 'ql_c' ) unit = 'kg/kg'
	338	IF ( TRIM( var ) == 'ql_v' ) unit = 'm3'
	339	IF ( TRIM( var ) == 'ql_vp' ) unit = 'none'
	340
	341	CASE ( 'qv' )
[3274]	342	IF ( .NOT. bulk_cloud_model ) THEN
[4648]	343	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	344	' " requires bulk_cloud_model = .TRUE.'
[564]	345	CALL message( 'init_masks', 'PA0108', 1, 2, 0, 6, 0 )
[298]	346	ENDIF
	347	unit = 'kg/kg'
	348
[4502]	349	CASE ( 'qi' )
	350	IF ( .NOT. bulk_cloud_model ) THEN
[4648]	351	message_string = 'output of "' // TRIM( var ) // '" ' // &
	352	'requires bulk_cloud_model = .TRUE.'
[4502]	353	CALL message( 'check_parameters', 'PA0108', 1, 2, 0, 6, 0 )
[4521]	354	ELSEIF ( .NOT. microphysics_ice_phase ) THEN
[4648]	355	message_string = 'output of "' // TRIM( var ) // '" ' // &
	356	'requires microphysics_ice_phase = .TRUE.'
[4502]	357	CALL message( 'check_parameters', 'PA0359', 1, 2, 0, 6, 0 )
	358	ENDIF
	359	unit = 'kg/kg'
	360
[1438]	361	CASE ( 'qr' )
[3274]	362	IF ( .NOT. bulk_cloud_model ) THEN
[4648]	363	message_string = 'output of "' // TRIM( var ) // '" ' // &
	364	'requires bulk_cloud_model = .TRUE.'
[1438]	365	CALL message( 'check_parameters', 'PA0108', 1, 2, 0, 6, 0 )
[1822]	366	ELSEIF ( .NOT. microphysics_seifert ) THEN
[4648]	367	message_string = 'output of "' // TRIM( var ) // '" ' // &
	368	'requires cloud_scheme = seifert_beheng'
[1438]	369	CALL message( 'check_parameters', 'PA0359', 1, 2, 0, 6, 0 )
	370	ENDIF
	371	unit = 'kg/kg'
	372
[3421]	373	CASE ( 'rho_sea_water' )
[3294]	374	IF ( .NOT. ocean_mode ) THEN
[4648]	375	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	376	'" requires ocean mode'
[564]	377	CALL message( 'init_masks', 'PA0109', 1, 2, 0, 6, 0 )
[298]	378	ENDIF
	379	unit = 'kg/m3'
	380
	381	CASE ( 's' )
	382	IF ( .NOT. passive_scalar ) THEN
[4648]	383	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	384	'" requires passive_scalar = .TRUE.'
[564]	385	CALL message( 'init_masks', 'PA0110', 1, 2, 0, 6, 0 )
[298]	386	ENDIF
	387	unit = 'conc'
	388
	389	CASE ( 'sa' )
[3294]	390	IF ( .NOT. ocean_mode ) THEN
[4648]	391	WRITE ( message_string, * ) 'output of "', TRIM( var ), '" requires ocean mode'
[564]	392	CALL message( 'init_masks', 'PA0109', 1, 2, 0, 6, 0 )
[298]	393	ENDIF
	394	unit = 'psu'
	395
[3421]	396	CASE ( 'us', 't', 'lwp', 'pra', 'prr', 'z0', 'z0h*' )
[4648]	397	WRITE ( message_string, * ) 'illegal value for data_', 'output: "', TRIM( var ), &
	398	'" is only allowed', 'for horizontal cross section'
[564]	399	CALL message( 'init_masks', 'PA0111', 1, 2, 0, 6, 0 )
[298]	400
[3421]	401	CASE ( 'p', 'theta', 'u', 'v', 'w' )
[298]	402	IF ( TRIM( var ) == 'p' ) unit = 'Pa'
[3421]	403	IF ( TRIM( var ) == 'theta' ) unit = 'K'
[298]	404	IF ( TRIM( var ) == 'u' ) unit = 'm/s'
	405	IF ( TRIM( var ) == 'v' ) unit = 'm/s'
	406	IF ( TRIM( var ) == 'w' ) unit = 'm/s'
	407	CONTINUE
	408
	409	CASE DEFAULT
[3687]	410	!
	411	!-- Allocate arrays for other modules
	412	CALL module_interface_init_masks( var, unit )
[298]	413
	414	IF ( unit == 'illegal' ) THEN
	415	IF ( do_mask_user(mid,1) /= ' ' ) THEN
[4648]	416	WRITE ( message_string, * ) 'illegal value for data_', &
	417	'output_masks or data_output_masks_user: "', &
	418	TRIM( do_mask(mid,i) ), '"'
[3045]	419	CALL message( 'init_masks', 'PA0018', 1, 2, 0, 6, 0 )
[298]	420	ELSE
[4648]	421	WRITE ( message_string, * ) 'illegal value for data_', &
	422	' output_masks : "', TRIM( do_mask(mid,i) ), '"'
[564]	423	CALL message( 'init_masks', 'PA0330', 1, 2, 0, 6, 0 )
[298]	424	ENDIF
	425	ENDIF
	426
	427	END SELECT
	428	!
	429	!-- Set the internal steering parameters appropriately
	430	domask_no(mid,j) = domask_no(mid,j) + 1
	431	domask(mid,j,domask_no(mid,j)) = do_mask(mid,i)
	432	domask_unit(mid,j,domask_no(mid,j)) = unit
	433
	434	IF ( j == 1 ) THEN
	435	!
	436	!-- Check, if variable is already subject to averaging
	437	found = .FALSE.
	438	DO k = 1, doav_n
	439	IF ( TRIM( doav(k) ) == TRIM( var ) ) found = .TRUE.
	440	ENDDO
	441
	442	IF ( .NOT. found ) THEN
	443	doav_n = doav_n + 1
	444	doav(doav_n) = var
	445	ENDIF
	446	ENDIF
	447
	448	i = i + 1
	449
	450	ENDDO ! do_mask(mid,i)
	451	ENDDO ! mid
	452
	453
	454	!
	455	!-- Determine mask locations for each mask
	456	DO mid = 1, masks
	457	!
	458	!-- Set local masks for each subdomain along all three dimensions
	459	CALL set_mask_locations( 1, dx, 'dx', nx, 'nx', nxl, nxr )
	460	CALL set_mask_locations( 2, dy, 'dy', ny, 'ny', nys, nyn )
[3435]	461	IF ( .NOT. mask_surface(mid) ) THEN
	462	CALL set_mask_locations( 3, dz(1), 'dz', nz, 'nz', nzb, nzt )
	463	ELSE
[298]	464	!
[4648]	465	!-- Set vertical mask locations and size in case of terrain-following output
[3435]	466	count = 0
	467	DO WHILE ( mask_k_over_surface(mid, count+1) >= 0 )
	468	m = mask_k_over_surface(mid, count+1)
	469	IF ( m > nz+1 ) THEN
[4648]	470	WRITE ( message_string, '(I3,A,I3,A,I1,3A,I3)' ) m, ' in mask ', mid, &
	471	' along dimension ', 3, &
	472	' exceeds (nz+1) = ', nz+1
[3435]	473	CALL message( 'init_masks', 'PA0331', 1, 2, 0, 6, 0 )
	474	ENDIF
	475	count = count + 1
	476	mask_k(mid,count) = mask_k_over_surface(mid, count)
	477	IF ( count == mask_xyz_dimension ) EXIT
	478	ENDDO
	479	mask_start_l(mid,3) = 1
	480	mask_size(mid,3) = count
	481	mask_size_l(mid,3) = count
	482	ENDIF
	483	!
[4648]	484	!-- Set global masks along all three dimensions (required by define_netcdf_header).
[1804]	485	#if defined( __parallel )
[298]	486	!
[4648]	487	!-- PE0 receives partial arrays from all processors of the respective mask and outputs them. Here
	488	!-- a barrier has to be set, because otherwise "-MPI- FATAL: Remote protocol queue full" may
	489	!-- occur.
[807]	490
[298]	491	CALL MPI_BARRIER( comm2d, ierr )
	492
	493	IF ( myid == 0 ) THEN
	494	!
	495	!-- Local arrays can be relocated directly.
	496	mask_i_global(mid,mask_start_l(mid,1): &
	497	mask_start_l(mid,1)+mask_size_l(mid,1)-1) = &
	498	mask_i(mid,:mask_size_l(mid,1))
	499	mask_j_global(mid,mask_start_l(mid,2): &
	500	mask_start_l(mid,2)+mask_size_l(mid,2)-1) = &
	501	mask_j(mid,:mask_size_l(mid,2))
	502	mask_k_global(mid,mask_start_l(mid,3): &
	503	mask_start_l(mid,3)+mask_size_l(mid,3)-1) = &
	504	mask_k(mid,:mask_size_l(mid,3))
	505	!
	506	!-- Receive data from all other PEs.
	507	DO n = 1, numprocs-1
	508	!
	509	!-- Receive index limits first, then arrays.
	510	!-- Index limits are received in arbitrary order from the PEs.
[4648]	511	CALL MPI_RECV( ind(1), 6, MPI_INTEGER, MPI_ANY_SOURCE, 0, comm2d, status, ierr )
[298]	512	!
	513	!-- Not all PEs have data for the mask.
	514	IF ( ind(1) /= -9999 ) THEN
	515	sender = status(MPI_SOURCE)
[4648]	516	CALL MPI_RECV( tmp_array(ind(1)), ind(2)-ind(1)+1, MPI_INTEGER, sender, 1, comm2d, &
	517	status, ierr )
[298]	518	mask_i_global(mid,ind(1):ind(2)) = tmp_array(ind(1):ind(2))
[4648]	519	CALL MPI_RECV( tmp_array(ind(3)), ind(4)-ind(3)+1, MPI_INTEGER, sender, 2, comm2d, &
	520	status, ierr )
[298]	521	mask_j_global(mid,ind(3):ind(4)) = tmp_array(ind(3):ind(4))
[4648]	522	CALL MPI_RECV( tmp_array(ind(5)), ind(6)-ind(5)+1, MPI_INTEGER, sender, 3, comm2d, &
	523	status, ierr )
[298]	524	mask_k_global(mid,ind(5):ind(6)) = tmp_array(ind(5):ind(6))
	525	ENDIF
	526	ENDDO
	527
	528	ELSE
	529	!
[4648]	530	!-- If at least part of the mask resides on the PE, send the index limits for the target
	531	!-- array, otherwise send -9999 to PE0.
	532	IF ( mask_size_l(mid,1) > 0 .AND. mask_size_l(mid,2) > 0 .AND. &
[996]	533	mask_size_l(mid,3) > 0 ) THEN
[298]	534	ind(1) = mask_start_l(mid,1)
	535	ind(2) = mask_start_l(mid,1) + mask_size_l(mid,1) - 1
	536	ind(3) = mask_start_l(mid,2)
	537	ind(4) = mask_start_l(mid,2) + mask_size_l(mid,2) - 1
	538	ind(5) = mask_start_l(mid,3)
	539	ind(6) = mask_start_l(mid,3) + mask_size_l(mid,3) - 1
	540	ELSE
	541	ind(1) = -9999; ind(2) = -9999
	542	ind(3) = -9999; ind(4) = -9999
	543	ind(5) = -9999; ind(6) = -9999
	544	ENDIF
	545	CALL MPI_SEND( ind(1), 6, MPI_INTEGER, 0, 0, comm2d, ierr )
	546	!
	547	!-- If applicable, send data to PE0.
	548	IF ( ind(1) /= -9999 ) THEN
	549	tmp_array(:mask_size_l(mid,1)) = mask_i(mid,:mask_size_l(mid,1))
[4648]	550	CALL MPI_SEND( tmp_array(1), mask_size_l(mid,1), MPI_INTEGER, 0, 1, comm2d, ierr )
[298]	551	tmp_array(:mask_size_l(mid,2)) = mask_j(mid,:mask_size_l(mid,2))
[4648]	552	CALL MPI_SEND( tmp_array(1), mask_size_l(mid,2), MPI_INTEGER, 0, 2, comm2d, ierr )
[298]	553	tmp_array(:mask_size_l(mid,3)) = mask_k(mid,:mask_size_l(mid,3))
[4648]	554	CALL MPI_SEND( tmp_array(1), mask_size_l(mid,3), MPI_INTEGER, 0, 3, comm2d, ierr )
[298]	555	ENDIF
	556	ENDIF
	557	!
[4648]	558	!-- A barrier has to be set, because otherwise some PEs may proceed too fast so that PE0 may
	559	!-- receive wrong data on tag 0.
[298]	560	CALL MPI_BARRIER( comm2d, ierr )
[4648]	561
[1031]	562	IF ( netcdf_data_format > 4 ) THEN
[4648]	563
	564	CALL MPI_BCAST( mask_i_global(mid,:), nx+2, MPI_INTEGER, 0, comm2d, ierr )
	565	CALL MPI_BCAST( mask_j_global(mid,:), ny+2, MPI_INTEGER, 0, comm2d, ierr )
	566	CALL MPI_BCAST( mask_k_global(mid,:), nz+2, MPI_INTEGER, 0, comm2d, ierr )
	567
[409]	568	ENDIF
[298]	569
[1804]	570	#else
[298]	571	!
	572	!-- Local arrays can be relocated directly.
	573	mask_i_global(mid,:) = mask_i(mid,:)
	574	mask_j_global(mid,:) = mask_j(mid,:)
	575	mask_k_global(mid,:) = mask_k(mid,:)
	576	#endif
	577	ENDDO ! mid
	578
	579	DEALLOCATE( tmp_array )
	580	!
[4648]	581	!-- Internal mask arrays cannot be deallocated on PE 0 because they are required for header output
	582	!-- on PE 0.
[298]	583	IF ( myid /= 0 ) DEALLOCATE( mask, mask_loop )
	584
	585	CONTAINS
[493]	586
[4648]	587	!--------------------------------------------------------------------------------------------------!
[298]	588	! Description:
	589	! ------------
[1682]	590	!> Set local mask for each subdomain along 'dim' direction.
[4648]	591	!--------------------------------------------------------------------------------------------------!
	592	SUBROUTINE set_mask_locations( dim, dxyz, dxyz_string, nxyz, nxyz_string, lb, ub )
[298]	593
	594	IMPLICIT NONE
	595
[1682]	596	CHARACTER (LEN=2) :: dxyz_string !<
	597	CHARACTER (LEN=2) :: nxyz_string !<
[4648]	598
[1682]	599	INTEGER(iwp) :: count !<
	600	INTEGER(iwp) :: count_l !<
	601	INTEGER(iwp) :: dim !<
	602	INTEGER(iwp) :: m !<
	603	INTEGER(iwp) :: loop_begin !<
	604	INTEGER(iwp) :: loop_end !<
	605	INTEGER(iwp) :: loop_stride !<
	606	INTEGER(iwp) :: lb !<
	607	INTEGER(iwp) :: nxyz !<
	608	INTEGER(iwp) :: ub !<
[4648]	609
[1682]	610	REAL(wp) :: dxyz !<
	611	REAL(wp) :: ddxyz !<
	612	REAL(wp) :: tmp1 !<
	613	REAL(wp) :: tmp2 !<
[298]	614
[4648]	615	count = 0; count_l = 0
	616	ddxyz = 1.0_wp / dxyz
[1353]	617	tmp1 = 0.0_wp
	618	tmp2 = 0.0_wp
[298]	619
[1353]	620	IF ( mask(mid,dim,1) >= 0.0_wp ) THEN
[298]	621	!
[4648]	622	!-- Use predefined mask_* array
[1353]	623	DO WHILE ( mask(mid,dim,count+1) >= 0.0_wp )
[298]	624	count = count + 1
[4648]	625	IF ( dim == 1 .OR. dim == 2 ) THEN
[1353]	626	m = NINT( mask(mid,dim,count) * mask_scale(dim) * ddxyz - 0.5_wp )
[1414]	627	IF ( m < 0 ) m = 0 ! avoid negative values
[298]	628	ELSEIF ( dim == 3 ) THEN
	629	ind_array = &
[595]	630	MINLOC( ABS( mask(mid,dim,count) * mask_scale(dim) - zu ) )
[298]	631	m = ind_array(1) - 1 + nzb ! MINLOC uses lower array bound 1
	632	ENDIF
[1414]	633	IF ( m > (nxyz+1) ) THEN
[4648]	634	WRITE ( message_string, '(I3,A,I3,A,I1,3A,I3)' ) m, ' in mask ', mid, &
	635	' along dimension ' ,dim, &
	636	' exceeds (' ,nxyz_string, &
	637	'+1) = ', nxyz+1
[564]	638	CALL message( 'init_masks', 'PA0331', 1, 2, 0, 6, 0 )
[298]	639	ENDIF
[4648]	640	IF ( ( m >= lb .AND. m <= ub ) .OR. ( m == (nxyz+1) .AND. ub == nxyz ) ) THEN
[298]	641	IF ( count_l == 0 ) mask_start_l(mid,dim) = count
	642	count_l = count_l + 1
	643	IF ( dim == 1 ) THEN
	644	mask_i(mid,count_l) = m
	645	ELSEIF ( dim == 2 ) THEN
	646	mask_j(mid,count_l) = m
	647	ELSEIF ( dim == 3 ) THEN
	648	mask_k(mid,count_l) = m
	649	ENDIF
	650	ENDIF
	651	IF ( count == mask_xyz_dimension ) EXIT
	652	ENDDO
	653	mask_size(mid,dim) = count
	654	mask_size_l(mid,dim) = count_l
	655
	656	ELSE
	657	!
[4648]	658	!-- Use predefined mask_loop_* array, or use the default (all grid points along this
	659	!-- direction)
[1353]	660	IF ( mask_loop(mid,dim,1) < 0.0_wp ) THEN
[298]	661	tmp1 = mask_loop(mid,dim,1)
[1186]	662	mask_loop(mid,dim,1) = zw(nzb) ! lowest level (default)
[298]	663	ENDIF
	664	IF ( dim == 1 .OR. dim == 2 ) THEN
[1353]	665	IF ( mask_loop(mid,dim,2) < 0.0_wp ) THEN
[298]	666	tmp2 = mask_loop(mid,dim,2)
[3512]	667	mask_loop(mid,dim,2) = nxyz*dxyz / mask_scale(dim) ! (default)
[298]	668	ENDIF
	669	IF ( MAXVAL( mask_loop(mid,dim,1:2) ) &
[1414]	670	> (nxyz+1) * dxyz / mask_scale(dim) ) THEN
[4648]	671	WRITE ( message_string, '(2(A,I3,A,I1,A,F9.3),5A,I1,A,F9.3)' ) &
	672	'mask_loop(', mid, ',', dim, ',1)=', mask_loop(mid,dim,1), &
	673	' and/or mask_loop(', mid, ',', dim, ',2)=', mask_loop(mid,dim,2), &
	674	' exceed (', nxyz_string,'+1)*',dxyz_string,'/mask_scale(',dim,')=', &
[1414]	675	(nxyz+1)*dxyz/mask_scale(dim)
[564]	676	CALL message( 'init_masks', 'PA0332', 1, 2, 0, 6, 0 )
[298]	677	ENDIF
[4648]	678	loop_begin = NINT( mask_loop(mid,dim,1) * mask_scale(dim) * ddxyz - 0.5_wp )
	679	loop_end = NINT( mask_loop(mid,dim,2) * mask_scale(dim) * ddxyz - 0.5_wp )
	680	loop_stride = NINT( mask_loop(mid,dim,3) * mask_scale(dim) * ddxyz )
[1414]	681	IF ( loop_begin == -1 ) loop_begin = 0 ! avoid negative values
[298]	682	ELSEIF ( dim == 3 ) THEN
[1353]	683	IF ( mask_loop(mid,dim,2) < 0.0_wp ) THEN
[298]	684	tmp2 = mask_loop(mid,dim,2)
[1414]	685	mask_loop(mid,dim,2) = zu(nz+1) / mask_scale(dim) ! (default)
[298]	686	ENDIF
[4648]	687	IF ( MAXVAL( mask_loop(mid,dim,1:2) ) > zu(nz+1) / mask_scale(dim) ) THEN
	688	WRITE ( message_string, '(2(A,I3,A,I1,A,F9.3),A,I1,A,F9.3)' ) &
	689	'mask_loop(', mid, ',', dim, ',1)=', mask_loop(mid,dim,1), &
	690	' and/or mask_loop(', mid, ',', dim, ',2)=', mask_loop(mid,dim,2), &
	691	' exceed zu(nz+1)/mask_scale(', dim, ')=',zu(nz+1)/mask_scale(dim)
[564]	692	CALL message( 'init_masks', 'PA0333', 1, 2, 0, 6, 0 )
[298]	693	ENDIF
[4648]	694	ind_array = MINLOC( ABS( mask_loop(mid,dim,1) * mask_scale(dim) - zu ) )
	695	loop_begin = ind_array(1) - 1 + nzb ! MINLOC uses lower array bound 1
	696	ind_array = MINLOC( ABS( mask_loop(mid,dim,2) * mask_scale(dim) - zu ) )
	697	loop_end = ind_array(1) - 1 + nzb ! MINLOC uses lower array bound 1
[298]	698	!
[4648]	699	!-- The following line assumes a constant vertical grid spacing within the vertical mask
	700	!-- range; it fails for vertical grid stretching.
	701	!-- Maybe revise later. Issue warning but continue execution. ABS(...) within the IF
	702	!-- statement is necessary because the default value of dz_stretch_level_start is
	703	!-- -9999999.9_wp.
[303]	704	loop_stride = NINT( mask_loop(mid,dim,3) * mask_scale(dim) * ddxyz )
	705
[4648]	706	IF ( mask_loop(mid,dim,2) * mask_scale(dim) > ABS( dz_stretch_level_start(1) ) ) THEN
	707	WRITE ( message_string, '(A,I3,A,I1,A,F9.3,A,F8.2,3A)' ) &
	708	'mask_loop(', mid, ',', dim, ',2)=', mask_loop(mid,dim,2), &
	709	' exceeds dz_stretch_level=', dz_stretch_level_start(1), &
	710	'.&Vertical mask locations will not ', &
	711	'match the desired heights within the stretching ', 'region.'
[564]	712	CALL message( 'init_masks', 'PA0334', 0, 1, 0, 6, 0 )
[303]	713	ENDIF
	714
[298]	715	ENDIF
	716	!
	717	!-- If necessary, reset mask_loop(mid,dim,1) and mask_loop(mid,dim,2).
[1353]	718	IF ( tmp1 < 0.0_wp ) mask_loop(mid,dim,1) = tmp1
	719	IF ( tmp2 < 0.0_wp ) mask_loop(mid,dim,2) = tmp2
[298]	720	!
[4648]	721	!-- The default stride +/-1 (every grid point) applies if mask_loop(mid,dim,3) is not
	722	!-- specified (its default is zero).
[298]	723	IF ( loop_stride == 0 ) THEN
	724	IF ( loop_end >= loop_begin ) THEN
	725	loop_stride = 1
	726	ELSE
	727	loop_stride = -1
	728	ENDIF
	729	ENDIF
	730	DO m = loop_begin, loop_end, loop_stride
	731	count = count + 1
[4648]	732	IF ( ( m >= lb .AND. m <= ub ) .OR. ( m == (nxyz+1) .AND. ub == nxyz ) ) THEN
[298]	733	IF ( count_l == 0 ) mask_start_l(mid,dim) = count
	734	count_l = count_l + 1
	735	IF ( dim == 1 ) THEN
	736	mask_i(mid,count_l) = m
	737	ELSEIF ( dim == 2 ) THEN
	738	mask_j(mid,count_l) = m
	739	ELSEIF ( dim == 3 ) THEN
	740	mask_k(mid,count_l) = m
	741	ENDIF
	742	ENDIF
	743	ENDDO
	744	mask_size(mid,dim) = count
	745	mask_size_l(mid,dim) = count_l
[1414]	746
[298]	747	ENDIF
	748
	749	END SUBROUTINE set_mask_locations
	750
	751	END SUBROUTINE init_masks

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