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source: palm/trunk/SOURCE/init_masks.f90 @ 3721

Last change on this file since 3721 was 3687, checked in by knoop, 6 years ago
Moved all user routunes that are dependencies of the PALM core only, to user_module.f90 The files that formerly contained these routines, have been deleted. Also module_interface routines for init_mask and last_actions have been added.
Property svn:keywords set to `Id`
File size: 34.2 KB

Rev	Line
[1682]	1	!> @file init_masks.f90
[2000]	2	!------------------------------------------------------------------------------!
[2696]	3	! This file is part of the PALM model system.
[1036]	4	!
[2000]	5	! PALM is free software: you can redistribute it and/or modify it under the
	6	! terms of the GNU General Public License as published by the Free Software
	7	! Foundation, either version 3 of the License, or (at your option) any later
	8	! version.
[1036]	9	!
	10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	!
	14	! You should have received a copy of the GNU General Public License along with
	15	! PALM. If not, see <http://www.gnu.org/licenses/>.
	16	!
[3655]	17	! Copyright 1997-2019 Leibniz Universitaet Hannover
[2000]	18	!------------------------------------------------------------------------------!
[1036]	19	!
[484]	20	! Current revisions:
[298]	21	! -----------------
[1805]	22	!
[3589]	23	!
[1321]	24	! Former revisions:
	25	! -----------------
	26	! $Id: init_masks.f90 3687 2019-01-22 10:42:06Z knoop $
[3665]	27	! unused variables removed
	28	!
	29	! 3655 2019-01-07 16:51:22Z knoop
[3589]	30	! Move the control parameter "salsa" from salsa_mod to control_parameters
	31	! (M. Kurppa)
	32	!
	33	! 3582 2018-11-29 19:16:36Z suehring
[3554]	34	! add variable description
	35	!
	36	! 3512 2018-11-09 18:09:51Z gronemeier
[3512]	37	! Bugfix: do not output ghost points if mask_x/y_loop is not specified
	38	!
	39	! 3467 2018-10-30 19:05:21Z suehring
[3467]	40	! Implementation of a new aerosol module salsa.
	41	!
	42	! 3435 2018-10-26 18:25:44Z gronemeier
[3435]	43	! Add checks for chemistry and radiation model
	44	! Set indices for terrain-following masked output
	45	!
	46	! 3421 2018-10-24 18:39:32Z gronemeier
[3421]	47	! Renamed output variables
	48	!
	49	! 3419 2018-10-24 17:27:31Z gronemeier
[3294]	50	! ocean renamed ocean_mode
	51	!
	52	! 3274 2018-09-24 15:42:55Z knoop
[3274]	53	! Modularization of all bulk cloud physics code components
	54	!
	55	! 3065 2018-06-12 07:03:02Z Giersch
[3065]	56	! dz_stretch_level was replaced by dz_stretch_level_start
	57	!
	58	! 3049 2018-05-29 13:52:36Z Giersch
[3045]	59	! Error messages revised
	60	!
[3049]	61	! 3045 2018-05-28 07:55:41Z Giersch
	62	! Error messages revised
	63	!
[3045]	64	! 2718 2018-01-02 08:49:38Z maronga
[2716]	65	! Corrected "Former revisions" section
	66	!
	67	! 2696 2017-12-14 17:12:51Z kanani
	68	! Change in file header (GPL part)
	69	!
	70	! 2344 2017-08-09 11:00:34Z raasch
[2344]	71	! explicit setting of initial values for array domask required due to a bug
	72	! in the Cray compiler (appears only if option -eD is used)
	73	!
	74	! 2301 2017-06-29 16:41:21Z gronemeier
[2301]	75	! Bugfix: set variable name length to global value
	76	!
	77	!
[2292]	78	! Implementation of new microphysic scheme: cloud_scheme = 'morrison'
	79	! includes two more prognostic equations for cloud drop concentration (nc)
	80	! and cloud water content (qc).
	81	!
	82	! 2271 2017-06-09 12:34:55Z sward
[2271]	83	! Changed error message
	84	!
	85	! 2101 2017-01-05 16:42:31Z suehring
[1321]	86	!
[2032]	87	! 2031 2016-10-21 15:11:58Z knoop
	88	! renamed variable rho to rho_ocean
	89	!
[2001]	90	! 2000 2016-08-20 18:09:15Z knoop
	91	! Forced header and separation lines into 80 columns
	92	!
[1823]	93	! 1822 2016-04-07 07:49:42Z hoffmann
	94	! icloud_scheme replaced by microphysics_*
	95	!
[1805]	96	! 1804 2016-04-05 16:30:18Z maronga
	97	! Removed code for parameter file check (__check)
	98	!
[1784]	99	! 1783 2016-03-06 18:36:17Z raasch
	100	! netcdf module name changed + related changes
	101	!
[1683]	102	! 1682 2015-10-07 23:56:08Z knoop
	103	! Code annotations made doxygen readable
	104	!
[1439]	105	! 1438 2014-07-22 14:14:06Z heinze
	106	! +nr, qc, qr
	107	!
[1415]	108	! 1414 2014-05-31 11:19:48Z gronemeier
	109	! Bugfix: first and last grid points as they appear in 3D volume data can now
	110	! be included to masked data output
	111	!
[1354]	112	! 1353 2014-04-08 15:21:23Z heinze
	113	! REAL constants provided with KIND-attribute
	114	!
[1325]	115	! 1324 2014-03-21 09:13:16Z suehring
	116	! Bugfix: ONLY statement for module netcdf_control removed
	117	!
[1321]	118	! 1320 2014-03-20 08:40:49Z raasch
[1320]	119	! ONLY-attribute added to USE-statements,
	120	! kind-parameters added to all INTEGER and REAL declaration statements,
	121	! kinds are defined in new module kinds,
	122	! revision history before 2012 removed,
	123	! comment fields (!:) to be used for variable explanations added to
	124	! all variable declaration statements
[298]	125	!
[1187]	126	! 1186 2013-06-18 06:22:52Z raasch
	127	! bugfix: 0.0 replaced by zu(nzb) as the lowest default height level for masks,
	128	! because a zero value does not work in case of ocean runs
	129	!
[1037]	130	! 1036 2012-10-22 13:43:42Z raasch
	131	! code put under GPL (PALM 3.9)
	132	!
[1033]	133	! 1032 2012-10-21 13:03:21Z letzel
	134	! mask locations determined based on scalar positions
	135	!
[1035]	136	! 1031 2012-10-19 14:35:30Z raasch
	137	! netCDF4 without parallel file support implemented
	138	!
[997]	139	! 996 2012-09-07 10:41:47Z raasch
	140	! little reformatting
	141	!
[979]	142	! 978 2012-08-09 08:28:32Z fricke
	143	! +z0h*
	144	!
[810]	145	! 809 2012-01-30 13:32:58Z maronga
	146	! Bugfix: replaced .AND. and .NOT. with && and ! in the preprocessor directives
	147	!
[808]	148	! 807 2012-01-25 11:53:51Z maronga
	149	! New cpp directive "__check" implemented which is used by check_namelist_files
	150	!
[449]	151	! 410 2009-12-04 17:05:40Z letzel
	152	! Initial revision
[298]	153	!
[449]	154	!
[298]	155	! Description:
	156	! ------------
[1682]	157	!> Initialize masked data output
[298]	158	!------------------------------------------------------------------------------!
[1682]	159	SUBROUTINE init_masks
[298]	160
[1320]	161	USE arrays_3d, &
	162	ONLY: zu, zw
	163
[3435]	164	USE bulk_cloud_model_mod, &
	165	ONLY: bulk_cloud_model, microphysics_morrison, microphysics_seifert
	166
[1320]	167	USE control_parameters, &
[3435]	168	ONLY: air_chemistry, &
	169	constant_diffusion, cloud_droplets, &
[1320]	170	data_output_masks, data_output_masks_user, &
[3065]	171	doav, doav_n, domask, domask_no, dz, dz_stretch_level_start, &
	172	humidity, mask, masks, mask_scale, mask_i, &
[1320]	173	mask_i_global, mask_j, mask_j_global, mask_k, mask_k_global, &
[3435]	174	mask_k_over_surface, &
	175	mask_loop, mask_size, mask_size_l, mask_start_l, &
	176	mask_surface, mask_x, &
[1320]	177	mask_x_loop, mask_xyz_dimension, mask_y, mask_y_loop, mask_z, &
	178	mask_z_loop, max_masks, message_string, mid, &
[3582]	179	passive_scalar, ocean_mode, salsa, varnamelength
[1320]	180
	181	USE grid_variables, &
	182	ONLY: dx, dy
	183
	184	USE indices, &
	185	ONLY: nx, nxl, nxr, ny, nyn, nys, nz, nzb, nzt
	186
	187	USE kinds
	188
[3687]	189	USE module_interface, &
	190	ONLY: module_interface_init_masks
	191
[1783]	192	USE netcdf_interface, &
	193	ONLY: domask_unit, netcdf_data_format
[1320]	194
	195	USE particle_attributes, &
	196	ONLY: particle_advection
	197
[3687]	198	USE pegrid
[3435]	199
[298]	200	IMPLICIT NONE
	201
[3554]	202	CHARACTER (LEN=varnamelength) :: var !< contains variable name
	203	CHARACTER (LEN=7) :: unit !< contains unit of variable
[1320]	204
[3554]	205	CHARACTER (LEN=varnamelength), DIMENSION(max_masks,100) :: do_mask !< list of output variables
	206	CHARACTER (LEN=varnamelength), DIMENSION(max_masks,100) :: do_mask_user !< list of user-specified output variables
[298]	207
[3435]	208	INTEGER(iwp) :: count !< counting masking indices along a dimension
[3554]	209	INTEGER(iwp) :: i !< loop index
	210	INTEGER(iwp) :: ilen !< length of string saved in 'do_mask'
	211	INTEGER(iwp) :: ind(6) !< index limits (lower/upper bounds) of output array
	212	INTEGER(iwp) :: ind_array(1) !< array index
	213	INTEGER(iwp) :: j !< loop index
	214	INTEGER(iwp) :: k !< loop index
[3435]	215	INTEGER(iwp) :: m !< mask index
[3554]	216	INTEGER(iwp) :: n !< loop index
	217	INTEGER(iwp) :: sender !< PE id of sending PE
[1320]	218
[3554]	219	INTEGER(iwp), DIMENSION(:), ALLOCATABLE :: tmp_array !< temporary 1D array
[298]	220
[3554]	221	LOGICAL :: found !< true if variable is found
[2344]	222
[298]	223	!
[2344]	224	!-- Initial values are explicitly set here due to a bug in the Cray compiler
	225	!-- in case of assignments of initial values in declaration statements for
	226	!-- arrays with more than 9999 elements (appears with -eD only)
	227	domask = ' '
	228
	229	!
[298]	230	!-- Allocation and initialization
[1414]	231	ALLOCATE( tmp_array( MAX(nx,ny,nz)+2 ) )
[298]	232
[1414]	233	ALLOCATE( mask_i(max_masks,nxr-nxl+2), &
	234	mask_j(max_masks,nyn-nys+2), &
	235	mask_k(max_masks,nzt-nzb+2) )
[298]	236	!
	237	!-- internal mask arrays ("mask,dimension,selection")
	238	ALLOCATE( mask(max_masks,3,mask_xyz_dimension), &
	239	mask_loop(max_masks,3,3) )
[493]	240
[298]	241	!
[3045]	242	!-- Parallel mask output not yet supported. In check_parameters data format
	243	!-- is restricted and is switched back to non-parallel output. Therefore the
	244	!-- following error can not occur at the moment.
[1031]	245	IF ( netcdf_data_format > 4 ) THEN
[3045]	246	message_string = 'netCDF file formats '// &
	247	'5 and 6 (with parallel I/O support)'// &
	248	' are currently not supported.'
[564]	249	CALL message( 'init_masks', 'PA0328', 1, 2, 0, 6, 0 )
[298]	250	ENDIF
[553]	251
[298]	252	!
	253	!-- Store data output parameters for masked data output in few shared arrays
[996]	254	DO mid = 1, masks
[564]	255
[553]	256	do_mask (mid,:) = data_output_masks(mid,:)
	257	do_mask_user(mid,:) = data_output_masks_user(mid,:)
	258	mask (mid,1,:) = mask_x(mid,:)
	259	mask (mid,2,:) = mask_y(mid,:)
	260	mask (mid,3,:) = mask_z(mid,:)
[3435]	261	!
	262	!-- Flag a mask as terrain following
	263	IF ( mask_k_over_surface(mid,1) /= -1_iwp ) THEN
	264	mask_surface(mid) = .TRUE.
	265	ENDIF
	266
[1353]	267	IF ( mask_x_loop(mid,1) == -1.0_wp .AND. mask_x_loop(mid,2) == -1.0_wp&
	268	.AND. mask_x_loop(mid,3) == -1.0_wp ) THEN
	269	mask_loop(mid,1,1:2) = -1.0_wp
	270	mask_loop(mid,1,3) = 0.0_wp
[564]	271	ELSE
	272	mask_loop(mid,1,:) = mask_x_loop(mid,:)
	273	ENDIF
[1353]	274	IF ( mask_y_loop(mid,1) == -1.0_wp .AND. mask_y_loop(mid,2) == -1.0_wp&
	275	.AND. mask_y_loop(mid,3) == -1.0_wp ) THEN
	276	mask_loop(mid,2,1:2) = -1.0_wp
	277	mask_loop(mid,2,3) = 0.0_wp
[564]	278	ELSE
	279	mask_loop(mid,2,:) = mask_y_loop(mid,:)
	280	ENDIF
[1353]	281	IF ( mask_z_loop(mid,1) == -1.0_wp .AND. mask_z_loop(mid,2) == -1.0_wp&
	282	.AND. mask_z_loop(mid,3) == -1.0_wp ) THEN
	283	mask_loop(mid,3,1:2) = -1.0_wp
	284	mask_loop(mid,3,3) = 0.0_wp
[564]	285	ELSE
	286	mask_loop(mid,3,:) = mask_z_loop(mid,:)
	287	ENDIF
	288
[553]	289	ENDDO
	290
[298]	291	mask_i = -1; mask_j = -1; mask_k = -1
[553]	292
[298]	293	!
	294	!-- Global arrays are required by define_netcdf_header.
[1031]	295	IF ( myid == 0 .OR. netcdf_data_format > 4 ) THEN
[1414]	296	ALLOCATE( mask_i_global(max_masks,nx+2), &
	297	mask_j_global(max_masks,ny+2), &
	298	mask_k_global(max_masks,nz+2) )
[298]	299	mask_i_global = -1; mask_j_global = -1; mask_k_global = -1
	300	ENDIF
	301
	302	!
	303	!-- Determine variable names for each mask
	304	DO mid = 1, masks
	305	!
	306	!-- Append user-defined data output variables to the standard data output
	307	IF ( do_mask_user(mid,1) /= ' ' ) THEN
	308	i = 1
	309	DO WHILE ( do_mask(mid,i) /= ' ' .AND. i <= 100 )
	310	i = i + 1
	311	ENDDO
	312	j = 1
	313	DO WHILE ( do_mask_user(mid,j) /= ' ' .AND. j <= 100 )
	314	IF ( i > 100 ) THEN
[3045]	315	WRITE ( message_string, * ) 'number of output quantitities ', &
	316	'given by data_output_mask and data_output_mask_user ', &
[298]	317	'exceeds the limit of 100'
[564]	318	CALL message( 'init_masks', 'PA0329', 1, 2, 0, 6, 0 )
[298]	319	ENDIF
	320	do_mask(mid,i) = do_mask_user(mid,j)
	321	i = i + 1
	322	j = j + 1
	323	ENDDO
	324	ENDIF
	325
	326	!
	327	!-- Check and set steering parameters for mask data output and averaging
	328	i = 1
[996]	329	DO WHILE ( do_mask(mid,i) /= ' ' .AND. i <= 100 )
[298]	330	!
	331	!-- Check for data averaging
	332	ilen = LEN_TRIM( do_mask(mid,i) )
	333	j = 0 ! no data averaging
	334	IF ( ilen > 3 ) THEN
	335	IF ( do_mask(mid,i)(ilen-2:ilen) == '_av' ) THEN
	336	j = 1 ! data averaging
	337	do_mask(mid,i) = do_mask(mid,i)(1:ilen-3)
	338	ENDIF
	339	ENDIF
	340	var = TRIM( do_mask(mid,i) )
	341	!
	342	!-- Check for allowed value and set units
	343	SELECT CASE ( TRIM( var ) )
	344
	345	CASE ( 'e' )
	346	IF ( constant_diffusion ) THEN
[3045]	347	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[298]	348	'" requires constant_diffusion = .FALSE.'
[564]	349	CALL message( 'init_masks', 'PA0103', 1, 2, 0, 6, 0 )
[298]	350	ENDIF
	351	unit = 'm2/s2'
	352
[3421]	353	CASE ( 'thetal' )
[3274]	354	IF ( .NOT. bulk_cloud_model ) THEN
[3045]	355	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[3274]	356	'" requires bulk_cloud_model = .TRUE.'
[773]	357	CALL message( 'init_masks', 'PA0108', 1, 2, 0, 6, 0 )
[771]	358	ENDIF
	359	unit = 'K'
	360
[2292]	361	CASE ( 'nc' )
[3274]	362	IF ( .NOT. bulk_cloud_model ) THEN
[3045]	363	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[3274]	364	'" requires bulk_cloud_model = .TRUE.'
[2292]	365	CALL message( 'init_masks', 'PA0108', 1, 2, 0, 6, 0 )
	366	ELSEIF ( .NOT. microphysics_morrison ) THEN
[3045]	367	message_string = 'output of "' // TRIM( var ) // '" ' // &
	368	'requires = morrison'
[2292]	369	CALL message( 'check_parameters', 'PA0359', 1, 2, 0, 6, 0 )
	370	ENDIF
	371	unit = '1/m3'
	372
[1438]	373	CASE ( 'nr' )
[3274]	374	IF ( .NOT. bulk_cloud_model ) THEN
[3045]	375	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[3274]	376	'" requires bulk_cloud_model = .TRUE.'
[1438]	377	CALL message( 'init_masks', 'PA0108', 1, 2, 0, 6, 0 )
[1822]	378	ELSEIF ( .NOT. microphysics_seifert ) THEN
[3045]	379	message_string = 'output of "' // TRIM( var ) // '"' // &
	380	'requires cloud_scheme = seifert_beheng'
[1438]	381	CALL message( 'check_parameters', 'PA0359', 1, 2, 0, 6, 0 )
	382	ENDIF
	383	unit = '1/m3'
	384
[298]	385	CASE ( 'pc', 'pr' )
	386	IF ( .NOT. particle_advection ) THEN
[3045]	387	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
	388	'" requires a "particles_par"-NAMELIST in the ', &
[298]	389	'parameter file (PARIN)'
[564]	390	CALL message( 'init_masks', 'PA0104', 1, 2, 0, 6, 0 )
[298]	391	ENDIF
	392	IF ( TRIM( var ) == 'pc' ) unit = 'number'
	393	IF ( TRIM( var ) == 'pr' ) unit = 'm'
	394
[3421]	395	CASE ( 'q', 'thetav' )
[298]	396	IF ( .NOT. humidity ) THEN
[3045]	397	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[298]	398	'" requires humidity = .TRUE.'
[564]	399	CALL message( 'init_masks', 'PA0105', 1, 2, 0, 6, 0 )
[298]	400	ENDIF
	401	IF ( TRIM( var ) == 'q' ) unit = 'kg/kg'
[3421]	402	IF ( TRIM( var ) == 'thetav' ) unit = 'K'
[298]	403
[1438]	404	CASE ( 'qc' )
[3274]	405	IF ( .NOT. bulk_cloud_model ) THEN
[3045]	406	message_string = 'output of "' // TRIM( var ) // '"' // &
[3274]	407	'requires bulk_cloud_model = .TRUE.'
[1438]	408	CALL message( 'check_parameters', 'PA0108', 1, 2, 0, 6, 0 )
	409	ENDIF
	410	unit = 'kg/kg'
	411
[298]	412	CASE ( 'ql' )
[3274]	413	IF ( .NOT. ( bulk_cloud_model .OR. cloud_droplets ) ) THEN
[3045]	414	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[3274]	415	'" requires bulk_cloud_model = .TRUE. or ', &
	416	'cloud_droplets = .TRUE.'
[3045]	417	CALL message( 'init_masks', 'PA0106', 1, 2, 0, 6, 0 )
[298]	418	ENDIF
	419	unit = 'kg/kg'
	420
	421	CASE ( 'ql_c', 'ql_v', 'ql_vp' )
	422	IF ( .NOT. cloud_droplets ) THEN
[3045]	423	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[298]	424	'" requires cloud_droplets = .TRUE.'
[564]	425	CALL message( 'init_masks', 'PA0107', 1, 2, 0, 6, 0 )
[298]	426	ENDIF
	427	IF ( TRIM( var ) == 'ql_c' ) unit = 'kg/kg'
	428	IF ( TRIM( var ) == 'ql_v' ) unit = 'm3'
	429	IF ( TRIM( var ) == 'ql_vp' ) unit = 'none'
	430
	431	CASE ( 'qv' )
[3274]	432	IF ( .NOT. bulk_cloud_model ) THEN
[3045]	433	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[3274]	434	'" requires bulk_cloud_model = .TRUE.'
[564]	435	CALL message( 'init_masks', 'PA0108', 1, 2, 0, 6, 0 )
[298]	436	ENDIF
	437	unit = 'kg/kg'
	438
[1438]	439	CASE ( 'qr' )
[3274]	440	IF ( .NOT. bulk_cloud_model ) THEN
[3045]	441	message_string = 'output of "' // TRIM( var ) // '" ' // &
[3274]	442	'requires bulk_cloud_model = .TRUE.'
[1438]	443	CALL message( 'check_parameters', 'PA0108', 1, 2, 0, 6, 0 )
[1822]	444	ELSEIF ( .NOT. microphysics_seifert ) THEN
[3045]	445	message_string = 'output of "' // TRIM( var ) // '" ' // &
	446	'requires cloud_scheme = seifert_beheng'
[1438]	447	CALL message( 'check_parameters', 'PA0359', 1, 2, 0, 6, 0 )
	448	ENDIF
	449	unit = 'kg/kg'
	450
[3421]	451	CASE ( 'rho_sea_water' )
[3294]	452	IF ( .NOT. ocean_mode ) THEN
[3045]	453	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[3294]	454	'" requires ocean mode'
[564]	455	CALL message( 'init_masks', 'PA0109', 1, 2, 0, 6, 0 )
[298]	456	ENDIF
	457	unit = 'kg/m3'
	458
	459	CASE ( 's' )
	460	IF ( .NOT. passive_scalar ) THEN
[3045]	461	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[298]	462	'" requires passive_scalar = .TRUE.'
[564]	463	CALL message( 'init_masks', 'PA0110', 1, 2, 0, 6, 0 )
[298]	464	ENDIF
	465	unit = 'conc'
	466
	467	CASE ( 'sa' )
[3294]	468	IF ( .NOT. ocean_mode ) THEN
[3045]	469	WRITE ( message_string, * ) 'output of "', TRIM( var ), &
[3294]	470	'" requires ocean mode'
[564]	471	CALL message( 'init_masks', 'PA0109', 1, 2, 0, 6, 0 )
[298]	472	ENDIF
	473	unit = 'psu'
	474
[3421]	475	CASE ( 'us', 't', 'lwp', 'pra', 'prr', 'z0', 'z0h*' )
[3045]	476	WRITE ( message_string, * ) 'illegal value for data_', &
	477	'output: "', TRIM( var ), '" is only allowed', &
[298]	478	'for horizontal cross section'
[564]	479	CALL message( 'init_masks', 'PA0111', 1, 2, 0, 6, 0 )
[298]	480
[3421]	481	CASE ( 'p', 'theta', 'u', 'v', 'w' )
[298]	482	IF ( TRIM( var ) == 'p' ) unit = 'Pa'
[3421]	483	IF ( TRIM( var ) == 'theta' ) unit = 'K'
[298]	484	IF ( TRIM( var ) == 'u' ) unit = 'm/s'
	485	IF ( TRIM( var ) == 'v' ) unit = 'm/s'
	486	IF ( TRIM( var ) == 'w' ) unit = 'm/s'
	487	CONTINUE
	488
	489	CASE DEFAULT
[3687]	490	!
	491	!-- Allocate arrays for other modules
	492	CALL module_interface_init_masks( var, unit )
[298]	493
	494	IF ( unit == 'illegal' ) THEN
	495	IF ( do_mask_user(mid,1) /= ' ' ) THEN
[3045]	496	WRITE ( message_string, * ) 'illegal value for data_', &
	497	'output_masks or data_output_masks_user: "', &
[298]	498	TRIM( do_mask(mid,i) ), '"'
[3045]	499	CALL message( 'init_masks', 'PA0018', 1, 2, 0, 6, 0 )
[298]	500	ELSE
[3045]	501	WRITE ( message_string, * ) 'illegal value for data_', &
	502	' output_masks : "', TRIM( do_mask(mid,i) ), '"'
[564]	503	CALL message( 'init_masks', 'PA0330', 1, 2, 0, 6, 0 )
[298]	504	ENDIF
	505	ENDIF
	506
	507	END SELECT
	508	!
	509	!-- Set the internal steering parameters appropriately
	510	domask_no(mid,j) = domask_no(mid,j) + 1
	511	domask(mid,j,domask_no(mid,j)) = do_mask(mid,i)
	512	domask_unit(mid,j,domask_no(mid,j)) = unit
	513
	514	IF ( j == 1 ) THEN
	515	!
	516	!-- Check, if variable is already subject to averaging
	517	found = .FALSE.
	518	DO k = 1, doav_n
	519	IF ( TRIM( doav(k) ) == TRIM( var ) ) found = .TRUE.
	520	ENDDO
	521
	522	IF ( .NOT. found ) THEN
	523	doav_n = doav_n + 1
	524	doav(doav_n) = var
	525	ENDIF
	526	ENDIF
	527
	528	i = i + 1
	529
	530	ENDDO ! do_mask(mid,i)
	531	ENDDO ! mid
	532
	533
	534	!
	535	!-- Determine mask locations for each mask
	536	DO mid = 1, masks
	537	!
	538	!-- Set local masks for each subdomain along all three dimensions
	539	CALL set_mask_locations( 1, dx, 'dx', nx, 'nx', nxl, nxr )
	540	CALL set_mask_locations( 2, dy, 'dy', ny, 'ny', nys, nyn )
[3435]	541	IF ( .NOT. mask_surface(mid) ) THEN
	542	CALL set_mask_locations( 3, dz(1), 'dz', nz, 'nz', nzb, nzt )
	543	ELSE
[298]	544	!
[3435]	545	!-- Set vertical mask locations and size in case of terrain-following
	546	!-- output
	547	count = 0
	548	DO WHILE ( mask_k_over_surface(mid, count+1) >= 0 )
	549	m = mask_k_over_surface(mid, count+1)
	550	IF ( m > nz+1 ) THEN
	551	WRITE ( message_string, '(I3,A,I3,A,I1,3A,I3)' ) &
	552	m,' in mask ',mid,' along dimension ', 3, &
	553	' exceeds (nz+1) = ',nz+1
	554	CALL message( 'init_masks', 'PA0331', 1, 2, 0, 6, 0 )
	555	ENDIF
	556	count = count + 1
	557	mask_k(mid,count) = mask_k_over_surface(mid, count)
	558	IF ( count == mask_xyz_dimension ) EXIT
	559	ENDDO
	560	mask_start_l(mid,3) = 1
	561	mask_size(mid,3) = count
	562	mask_size_l(mid,3) = count
	563	ENDIF
	564	!
[298]	565	!-- Set global masks along all three dimensions (required by
	566	!-- define_netcdf_header).
[1804]	567	#if defined( __parallel )
[298]	568	!
	569	!-- PE0 receives partial arrays from all processors of the respective mask
	570	!-- and outputs them. Here a barrier has to be set, because otherwise
	571	!-- "-MPI- FATAL: Remote protocol queue full" may occur.
[807]	572
[298]	573	CALL MPI_BARRIER( comm2d, ierr )
	574
	575	IF ( myid == 0 ) THEN
	576	!
	577	!-- Local arrays can be relocated directly.
	578	mask_i_global(mid,mask_start_l(mid,1): &
	579	mask_start_l(mid,1)+mask_size_l(mid,1)-1) = &
	580	mask_i(mid,:mask_size_l(mid,1))
	581	mask_j_global(mid,mask_start_l(mid,2): &
	582	mask_start_l(mid,2)+mask_size_l(mid,2)-1) = &
	583	mask_j(mid,:mask_size_l(mid,2))
	584	mask_k_global(mid,mask_start_l(mid,3): &
	585	mask_start_l(mid,3)+mask_size_l(mid,3)-1) = &
	586	mask_k(mid,:mask_size_l(mid,3))
	587	!
	588	!-- Receive data from all other PEs.
	589	DO n = 1, numprocs-1
	590	!
	591	!-- Receive index limits first, then arrays.
	592	!-- Index limits are received in arbitrary order from the PEs.
	593	CALL MPI_RECV( ind(1), 6, MPI_INTEGER, MPI_ANY_SOURCE, 0, &
	594	comm2d, status, ierr )
	595	!
	596	!-- Not all PEs have data for the mask.
	597	IF ( ind(1) /= -9999 ) THEN
	598	sender = status(MPI_SOURCE)
	599	CALL MPI_RECV( tmp_array(ind(1)), ind(2)-ind(1)+1, &
[363]	600	MPI_INTEGER, sender, 1, comm2d, status, ierr )
[298]	601	mask_i_global(mid,ind(1):ind(2)) = tmp_array(ind(1):ind(2))
	602	CALL MPI_RECV( tmp_array(ind(3)), ind(4)-ind(3)+1, &
[363]	603	MPI_INTEGER, sender, 2, comm2d, status, ierr )
[298]	604	mask_j_global(mid,ind(3):ind(4)) = tmp_array(ind(3):ind(4))
	605	CALL MPI_RECV( tmp_array(ind(5)), ind(6)-ind(5)+1, &
[363]	606	MPI_INTEGER, sender, 3, comm2d, status, ierr )
[298]	607	mask_k_global(mid,ind(5):ind(6)) = tmp_array(ind(5):ind(6))
	608	ENDIF
	609	ENDDO
	610
	611	ELSE
	612	!
	613	!-- If at least part of the mask resides on the PE, send the index limits
	614	!-- for the target array, otherwise send -9999 to PE0.
[996]	615	IF ( mask_size_l(mid,1) > 0 .AND. mask_size_l(mid,2) > 0 .AND. &
	616	mask_size_l(mid,3) > 0 ) THEN
[298]	617	ind(1) = mask_start_l(mid,1)
	618	ind(2) = mask_start_l(mid,1) + mask_size_l(mid,1) - 1
	619	ind(3) = mask_start_l(mid,2)
	620	ind(4) = mask_start_l(mid,2) + mask_size_l(mid,2) - 1
	621	ind(5) = mask_start_l(mid,3)
	622	ind(6) = mask_start_l(mid,3) + mask_size_l(mid,3) - 1
	623	ELSE
	624	ind(1) = -9999; ind(2) = -9999
	625	ind(3) = -9999; ind(4) = -9999
	626	ind(5) = -9999; ind(6) = -9999
	627	ENDIF
	628	CALL MPI_SEND( ind(1), 6, MPI_INTEGER, 0, 0, comm2d, ierr )
	629	!
	630	!-- If applicable, send data to PE0.
	631	IF ( ind(1) /= -9999 ) THEN
	632	tmp_array(:mask_size_l(mid,1)) = mask_i(mid,:mask_size_l(mid,1))
	633	CALL MPI_SEND( tmp_array(1), mask_size_l(mid,1), &
[363]	634	MPI_INTEGER, 0, 1, comm2d, ierr )
[298]	635	tmp_array(:mask_size_l(mid,2)) = mask_j(mid,:mask_size_l(mid,2))
	636	CALL MPI_SEND( tmp_array(1), mask_size_l(mid,2), &
[363]	637	MPI_INTEGER, 0, 2, comm2d, ierr )
[298]	638	tmp_array(:mask_size_l(mid,3)) = mask_k(mid,:mask_size_l(mid,3))
	639	CALL MPI_SEND( tmp_array(1), mask_size_l(mid,3), &
[363]	640	MPI_INTEGER, 0, 3, comm2d, ierr )
[298]	641	ENDIF
	642	ENDIF
	643	!
	644	!-- A barrier has to be set, because otherwise some PEs may proceed too fast
	645	!-- so that PE0 may receive wrong data on tag 0.
	646	CALL MPI_BARRIER( comm2d, ierr )
[409]	647
[1031]	648	IF ( netcdf_data_format > 4 ) THEN
[409]	649
[1414]	650	CALL MPI_BCAST( mask_i_global(mid,:), nx+2, MPI_INTEGER, 0, comm2d, &
[493]	651	ierr )
[1414]	652	CALL MPI_BCAST( mask_j_global(mid,:), ny+2, MPI_INTEGER, 0, comm2d, &
[493]	653	ierr )
[1414]	654	CALL MPI_BCAST( mask_k_global(mid,:), nz+2, MPI_INTEGER, 0, comm2d, &
[493]	655	ierr )
[1682]	656
[409]	657	ENDIF
[298]	658
[1804]	659	#else
[298]	660	!
	661	!-- Local arrays can be relocated directly.
	662	mask_i_global(mid,:) = mask_i(mid,:)
	663	mask_j_global(mid,:) = mask_j(mid,:)
	664	mask_k_global(mid,:) = mask_k(mid,:)
	665	#endif
	666	ENDDO ! mid
	667
	668	DEALLOCATE( tmp_array )
	669	!
	670	!-- Internal mask arrays cannot be deallocated on PE 0 because they are
	671	!-- required for header output on PE 0.
	672	IF ( myid /= 0 ) DEALLOCATE( mask, mask_loop )
	673
	674	CONTAINS
[493]	675
[298]	676	!------------------------------------------------------------------------------!
	677	! Description:
	678	! ------------
[1682]	679	!> Set local mask for each subdomain along 'dim' direction.
[298]	680	!------------------------------------------------------------------------------!
[1682]	681	SUBROUTINE set_mask_locations( dim, dxyz, dxyz_string, nxyz, nxyz_string, &
	682	lb, ub )
[298]	683
	684	IMPLICIT NONE
	685
[1682]	686	CHARACTER (LEN=2) :: dxyz_string !<
	687	CHARACTER (LEN=2) :: nxyz_string !<
[1320]	688
[1682]	689	INTEGER(iwp) :: count !<
	690	INTEGER(iwp) :: count_l !<
	691	INTEGER(iwp) :: dim !<
	692	INTEGER(iwp) :: m !<
	693	INTEGER(iwp) :: loop_begin !<
	694	INTEGER(iwp) :: loop_end !<
	695	INTEGER(iwp) :: loop_stride !<
	696	INTEGER(iwp) :: lb !<
	697	INTEGER(iwp) :: nxyz !<
	698	INTEGER(iwp) :: ub !<
[1320]	699
[1682]	700	REAL(wp) :: dxyz !<
	701	REAL(wp) :: ddxyz !<
	702	REAL(wp) :: tmp1 !<
	703	REAL(wp) :: tmp2 !<
[298]	704
[1353]	705	count = 0; count_l = 0
	706	ddxyz = 1.0_wp / dxyz
	707	tmp1 = 0.0_wp
	708	tmp2 = 0.0_wp
[298]	709
[1353]	710	IF ( mask(mid,dim,1) >= 0.0_wp ) THEN
[298]	711	!
	712	!-- use predefined mask_* array
[1353]	713	DO WHILE ( mask(mid,dim,count+1) >= 0.0_wp )
[298]	714	count = count + 1
	715	IF ( dim == 1 .OR. dim == 2 ) THEN
[1353]	716	m = NINT( mask(mid,dim,count) * mask_scale(dim) * ddxyz - 0.5_wp )
[1414]	717	IF ( m < 0 ) m = 0 ! avoid negative values
[298]	718	ELSEIF ( dim == 3 ) THEN
	719	ind_array = &
[595]	720	MINLOC( ABS( mask(mid,dim,count) * mask_scale(dim) - zu ) )
[298]	721	m = ind_array(1) - 1 + nzb ! MINLOC uses lower array bound 1
	722	ENDIF
[1414]	723	IF ( m > (nxyz+1) ) THEN
[3045]	724	WRITE ( message_string, '(I3,A,I3,A,I1,3A,I3)' ) &
	725	m,' in mask ',mid,' along dimension ',dim, &
[1414]	726	' exceeds (',nxyz_string,'+1) = ',nxyz+1
[564]	727	CALL message( 'init_masks', 'PA0331', 1, 2, 0, 6, 0 )
[298]	728	ENDIF
[1414]	729	IF ( ( m >= lb .AND. m <= ub ) .OR. &
	730	( m == (nxyz+1) .AND. ub == nxyz ) ) THEN
[298]	731	IF ( count_l == 0 ) mask_start_l(mid,dim) = count
	732	count_l = count_l + 1
	733	IF ( dim == 1 ) THEN
	734	mask_i(mid,count_l) = m
	735	ELSEIF ( dim == 2 ) THEN
	736	mask_j(mid,count_l) = m
	737	ELSEIF ( dim == 3 ) THEN
	738	mask_k(mid,count_l) = m
	739	ENDIF
	740	ENDIF
	741	IF ( count == mask_xyz_dimension ) EXIT
	742	ENDDO
	743	mask_size(mid,dim) = count
	744	mask_size_l(mid,dim) = count_l
	745
	746	ELSE
	747	!
	748	!-- use predefined mask_loop_* array, or use the default (all grid points
	749	!-- along this direction)
[1353]	750	IF ( mask_loop(mid,dim,1) < 0.0_wp ) THEN
[298]	751	tmp1 = mask_loop(mid,dim,1)
[1186]	752	mask_loop(mid,dim,1) = zw(nzb) ! lowest level (default)
[298]	753	ENDIF
	754	IF ( dim == 1 .OR. dim == 2 ) THEN
[1353]	755	IF ( mask_loop(mid,dim,2) < 0.0_wp ) THEN
[298]	756	tmp2 = mask_loop(mid,dim,2)
[3512]	757	mask_loop(mid,dim,2) = nxyz*dxyz / mask_scale(dim) ! (default)
[298]	758	ENDIF
	759	IF ( MAXVAL( mask_loop(mid,dim,1:2) ) &
[1414]	760	> (nxyz+1) * dxyz / mask_scale(dim) ) THEN
[303]	761	WRITE ( message_string, '(2(A,I3,A,I1,A,F9.3),5A,I1,A,F9.3)' ) &
[3045]	762	'mask_loop(',mid,',',dim,',1)=',mask_loop(mid,dim,1), &
[303]	763	' and/or mask_loop(',mid,',',dim,',2)=', &
[3045]	764	mask_loop(mid,dim,2),' exceed (', &
	765	nxyz_string,'+1)*',dxyz_string,'/mask_scale(',dim,')=', &
[1414]	766	(nxyz+1)*dxyz/mask_scale(dim)
[564]	767	CALL message( 'init_masks', 'PA0332', 1, 2, 0, 6, 0 )
[298]	768	ENDIF
[3045]	769	loop_begin = NINT( mask_loop(mid,dim,1) * mask_scale(dim) &
[1353]	770	* ddxyz - 0.5_wp )
[3045]	771	loop_end = NINT( mask_loop(mid,dim,2) * mask_scale(dim) &
[1353]	772	* ddxyz - 0.5_wp )
[3045]	773	loop_stride = NINT( mask_loop(mid,dim,3) * mask_scale(dim) &
[1032]	774	* ddxyz )
[1414]	775	IF ( loop_begin == -1 ) loop_begin = 0 ! avoid negative values
[298]	776	ELSEIF ( dim == 3 ) THEN
[1353]	777	IF ( mask_loop(mid,dim,2) < 0.0_wp ) THEN
[298]	778	tmp2 = mask_loop(mid,dim,2)
[1414]	779	mask_loop(mid,dim,2) = zu(nz+1) / mask_scale(dim) ! (default)
[298]	780	ENDIF
	781	IF ( MAXVAL( mask_loop(mid,dim,1:2) ) &
[1414]	782	> zu(nz+1) / mask_scale(dim) ) THEN
[3045]	783	WRITE ( message_string, '(2(A,I3,A,I1,A,F9.3),A,I1,A,F9.3)' ) &
	784	'mask_loop(',mid,',',dim,',1)=',mask_loop(mid,dim,1), &
[303]	785	' and/or mask_loop(',mid,',',dim,',2)=', &
[3045]	786	mask_loop(mid,dim,2),' exceed zu(nz+1)/mask_scale(',dim, &
[1414]	787	')=',zu(nz+1)/mask_scale(dim)
[564]	788	CALL message( 'init_masks', 'PA0333', 1, 2, 0, 6, 0 )
[298]	789	ENDIF
[303]	790	ind_array = &
[595]	791	MINLOC( ABS( mask_loop(mid,dim,1) * mask_scale(dim) - zu ) )
[298]	792	loop_begin = &
[303]	793	ind_array(1) - 1 + nzb ! MINLOC uses lower array bound 1
	794	ind_array = &
[595]	795	MINLOC( ABS( mask_loop(mid,dim,2) * mask_scale(dim) - zu ) )
[298]	796	loop_end = ind_array(1) - 1 + nzb ! MINLOC uses lower array bound 1
	797	!
[303]	798	!-- The following line assumes a constant vertical grid spacing within
	799	!-- the vertical mask range; it fails for vertical grid stretching.
[3065]	800	!-- Maybe revise later. Issue warning but continue execution. ABS(...)
	801	!-- within the IF statement is necessary because the default value of
	802	!-- dz_stretch_level_start is -9999999.9_wp.
[303]	803	loop_stride = NINT( mask_loop(mid,dim,3) * mask_scale(dim) * ddxyz )
	804
[3065]	805	IF ( mask_loop(mid,dim,2) * mask_scale(dim) > &
	806	ABS( dz_stretch_level_start(1) ) ) THEN
[3045]	807	WRITE ( message_string, '(A,I3,A,I1,A,F9.3,A,F8.2,3A)' ) &
	808	'mask_loop(',mid,',',dim,',2)=', mask_loop(mid,dim,2), &
[3065]	809	' exceeds dz_stretch_level=',dz_stretch_level_start(1), &
[3046]	810	'.&Vertical mask locations will not ', &
[3045]	811	'match the desired heights within the stretching ', &
[2271]	812	'region.'
[564]	813	CALL message( 'init_masks', 'PA0334', 0, 1, 0, 6, 0 )
[303]	814	ENDIF
	815
[298]	816	ENDIF
	817	!
	818	!-- If necessary, reset mask_loop(mid,dim,1) and mask_loop(mid,dim,2).
[1353]	819	IF ( tmp1 < 0.0_wp ) mask_loop(mid,dim,1) = tmp1
	820	IF ( tmp2 < 0.0_wp ) mask_loop(mid,dim,2) = tmp2
[298]	821	!
	822	!-- The default stride +/-1 (every grid point) applies if
	823	!-- mask_loop(mid,dim,3) is not specified (its default is zero).
	824	IF ( loop_stride == 0 ) THEN
	825	IF ( loop_end >= loop_begin ) THEN
	826	loop_stride = 1
	827	ELSE
	828	loop_stride = -1
	829	ENDIF
	830	ENDIF
	831	DO m = loop_begin, loop_end, loop_stride
	832	count = count + 1
[1414]	833	IF ( ( m >= lb .AND. m <= ub ) .OR. &
	834	( m == (nxyz+1) .AND. ub == nxyz ) ) THEN
[298]	835	IF ( count_l == 0 ) mask_start_l(mid,dim) = count
	836	count_l = count_l + 1
	837	IF ( dim == 1 ) THEN
	838	mask_i(mid,count_l) = m
	839	ELSEIF ( dim == 2 ) THEN
	840	mask_j(mid,count_l) = m
	841	ELSEIF ( dim == 3 ) THEN
	842	mask_k(mid,count_l) = m
	843	ENDIF
	844	ENDIF
	845	ENDDO
	846	mask_size(mid,dim) = count
	847	mask_size_l(mid,dim) = count_l
[1414]	848
[298]	849	ENDIF
	850
	851	END SUBROUTINE set_mask_locations
	852
	853	END SUBROUTINE init_masks

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