Home

Context Navigation

source: palm/trunk/SOURCE/init_3d_model.f90 @ 1409

Last change on this file since 1409 was 1407, checked in by raasch, 10 years ago
last commit documented
Property svn:keywords set to `Id`
File size: 66.8 KB

Rev	Line
[1]	1	SUBROUTINE init_3d_model
	2
[1036]	3	!--------------------------------------------------------------------------------!
	4	! This file is part of PALM.
	5	!
	6	! PALM is free software: you can redistribute it and/or modify it under the terms
	7	! of the GNU General Public License as published by the Free Software Foundation,
	8	! either version 3 of the License, or (at your option) any later version.
	9	!
	10	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	!
	14	! You should have received a copy of the GNU General Public License along with
	15	! PALM. If not, see <http://www.gnu.org/licenses/>.
	16	!
[1310]	17	! Copyright 1997-2014 Leibniz Universitaet Hannover
[1036]	18	!--------------------------------------------------------------------------------!
	19	!
[254]	20	! Current revisions:
[732]	21	! ------------------
[1341]	22	!
[1407]	23	!
[1054]	24	! Former revisions:
	25	! -----------------
	26	! $Id: init_3d_model.f90 1407 2014-05-16 14:06:08Z suehring $
	27	!
[1407]	28	! 1406 2014-05-16 13:47:01Z raasch
	29	! bugfix: setting of initial velocities at k=1 to zero not in case of a
	30	! no-slip boundary condition for uv
	31	!
[1403]	32	! 1402 2014-05-09 14:25:13Z raasch
	33	! location messages modified
	34	!
[1401]	35	! 1400 2014-05-09 14:03:54Z knoop
	36	! Parallel random number generator added
	37	!
[1385]	38	! 1384 2014-05-02 14:31:06Z raasch
	39	! location messages added
	40	!
[1362]	41	! 1361 2014-04-16 15:17:48Z hoffmann
	42	! tend_* removed
	43	! Bugfix: w_subs is not allocated anymore if it is already allocated
	44	!
[1360]	45	! 1359 2014-04-11 17:15:14Z hoffmann
	46	! module lpm_init_mod added to use statements, because lpm_init has become a
	47	! module
	48	!
[1354]	49	! 1353 2014-04-08 15:21:23Z heinze
	50	! REAL constants provided with KIND-attribute
	51	!
[1341]	52	! 1340 2014-03-25 19:45:13Z kanani
	53	! REAL constants defined as wp-kind
	54	!
[1323]	55	! 1322 2014-03-20 16:38:49Z raasch
	56	! REAL constants defined as wp-kind
	57	! module interfaces removed
	58	!
[1321]	59	! 1320 2014-03-20 08:40:49Z raasch
	60	! ONLY-attribute added to USE-statements,
	61	! kind-parameters added to all INTEGER and REAL declaration statements,
	62	! kinds are defined in new module kinds,
	63	! revision history before 2012 removed,
	64	! comment fields (!:) to be used for variable explanations added to
	65	! all variable declaration statements
	66	!
[1317]	67	! 1316 2014-03-17 07:44:59Z heinze
	68	! Bugfix: allocation of w_subs
	69	!
[1300]	70	! 1299 2014-03-06 13:15:21Z heinze
	71	! Allocate w_subs due to extension of large scale subsidence in combination
	72	! with large scale forcing data (LSF_DATA)
	73	!
[1242]	74	! 1241 2013-10-30 11:36:58Z heinze
	75	! Overwrite initial profiles in case of nudging
	76	! Inititialize shf and qsws in case of large_scale_forcing
	77	!
[1222]	78	! 1221 2013-09-10 08:59:13Z raasch
	79	! +rflags_s_inner in copyin statement, use copyin for most arrays instead of
	80	! copy
	81	!
[1213]	82	! 1212 2013-08-15 08:46:27Z raasch
	83	! array tri is allocated and included in data copy statement
	84	!
[1196]	85	! 1195 2013-07-01 12:27:57Z heinze
	86	! Bugfix: move allocation of ref_state to parin.f90 and read_var_list.f90
	87	!
[1182]	88	! 1179 2013-06-14 05:57:58Z raasch
	89	! allocate and set ref_state to be used in buoyancy terms
	90	!
[1172]	91	! 1171 2013-05-30 11:27:45Z raasch
	92	! diss array is allocated with full size if accelerator boards are used
	93	!
[1160]	94	! 1159 2013-05-21 11:58:22Z fricke
	95	! -bc_lr_dirneu, bc_lr_neudir, bc_ns_dirneu, bc_ns_neudir
	96	!
[1154]	97	! 1153 2013-05-10 14:33:08Z raasch
	98	! diss array is allocated with dummy elements even if it is not needed
[1171]	99	! (required by PGI 13.4 / CUDA 5.0)
[1154]	100	!
[1116]	101	! 1115 2013-03-26 18:16:16Z hoffmann
	102	! unused variables removed
	103	!
[1114]	104	! 1113 2013-03-10 02:48:14Z raasch
	105	! openACC directive modified
	106	!
[1112]	107	! 1111 2013-03-08 23:54:10Z raasch
	108	! openACC directives added for pres
	109	! array diss allocated only if required
	110	!
[1093]	111	! 1092 2013-02-02 11:24:22Z raasch
	112	! unused variables removed
	113	!
[1066]	114	! 1065 2012-11-22 17:42:36Z hoffmann
	115	! allocation of diss (dissipation rate) in case of turbulence = .TRUE. added
	116	!
[1054]	117	! 1053 2012-11-13 17:11:03Z hoffmann
[1053]	118	! allocation and initialisation of necessary data arrays for the two-moment
	119	! cloud physics scheme the two new prognostic equations (nr, qr):
	120	! +dr, lambda_r, mu_r, sed_, xr, s, sws, swst, , _p, t_m, _1, _2, _3,
	121	! +tend_*, prr
[979]	122	!
[1037]	123	! 1036 2012-10-22 13:43:42Z raasch
	124	! code put under GPL (PALM 3.9)
	125	!
[1033]	126	! 1032 2012-10-21 13:03:21Z letzel
	127	! save memory by not allocating pt_2 in case of neutral = .T.
	128	!
[1026]	129	! 1025 2012-10-07 16:04:41Z letzel
	130	! bugfix: swap indices of mask for ghost boundaries
	131	!
[1017]	132	! 1015 2012-09-27 09:23:24Z raasch
	133	! mask is set to zero for ghost boundaries
	134	!
[1011]	135	! 1010 2012-09-20 07:59:54Z raasch
	136	! cpp switch __nopointer added for pointer free version
	137	!
[1004]	138	! 1003 2012-09-14 14:35:53Z raasch
	139	! nxra,nyna, nzta replaced ny nxr, nyn, nzt
	140	!
[1002]	141	! 1001 2012-09-13 14:08:46Z raasch
	142	! all actions concerning leapfrog scheme removed
	143	!
[997]	144	! 996 2012-09-07 10:41:47Z raasch
	145	! little reformatting
	146	!
[979]	147	! 978 2012-08-09 08:28:32Z fricke
[978]	148	! outflow damping layer removed
	149	! roughness length for scalar quantites z0h added
	150	! damping zone for the potential temperatur in case of non-cyclic lateral
	151	! boundaries added
	152	! initialization of ptdf_x, ptdf_y
	153	! initialization of c_u_m, c_u_m_l, c_v_m, c_v_m_l, c_w_m, c_w_m_l
[708]	154	!
[850]	155	! 849 2012-03-15 10:35:09Z raasch
	156	! init_particles renamed lpm_init
	157	!
[826]	158	! 825 2012-02-19 03:03:44Z raasch
	159	! wang_collision_kernel renamed wang_kernel
	160	!
[1]	161	! Revision 1.1 1998/03/09 16:22:22 raasch
	162	! Initial revision
	163	!
	164	!
	165	! Description:
	166	! ------------
	167	! Allocation of arrays and initialization of the 3D model via
	168	! a) pre-run the 1D model
	169	! or
	170	! b) pre-set constant linear profiles
	171	! or
	172	! c) read values of a previous run
	173	!------------------------------------------------------------------------------!
	174
[667]	175	USE advec_ws
[1320]	176
[1]	177	USE arrays_3d
[1320]	178
	179	USE cloud_parameters, &
	180	ONLY: nc_const, precipitation_amount, precipitation_rate, prr
	181
	182	USE constants, &
	183	ONLY: pi
	184
[1]	185	USE control_parameters
[1320]	186
	187	USE grid_variables, &
	188	ONLY: dx, dy
	189
[1]	190	USE indices
[1359]	191
	192	USE lpm_init_mod, &
	193	ONLY: lpm_init
[1320]	194
	195	USE kinds
	196
[1241]	197	USE ls_forcing_mod
[1320]	198
	199	USE model_1d, &
	200	ONLY: e1d, kh1d, km1d, l1d, rif1d, u1d, us1d, usws1d, v1d, vsws1d
	201
[51]	202	USE netcdf_control
[1320]	203
	204	USE particle_attributes, &
	205	ONLY: particle_advection, use_sgs_for_particles, wang_kernel
	206
[1]	207	USE pegrid
[1320]	208
	209	USE random_function_mod
	210
[1400]	211	USE random_generator_parallel, &
	212	ONLY: random_number_parallel, random_seed_parallel, random_dummy, &
	213	id_random_array, seq_random_array
	214
[1320]	215	USE statistics, &
	216	ONLY: hom, hom_sum, pr_palm, rmask, spectrum_x, spectrum_y, &
	217	statistic_regions, sums, sums_divnew_l, sums_divold_l, sums_l, &
	218	sums_l_l, sums_up_fraction_l, sums_wsts_bc_l, ts_value, &
	219	weight_pres, weight_substep
	220
	221	USE transpose_indices
[1]	222
	223	IMPLICIT NONE
	224
[1320]	225	INTEGER(iwp) :: i !:
	226	INTEGER(iwp) :: ind_array(1) !:
	227	INTEGER(iwp) :: j !:
	228	INTEGER(iwp) :: k !:
	229	INTEGER(iwp) :: sr !:
[1]	230
[1320]	231	INTEGER(iwp), DIMENSION(:), ALLOCATABLE :: ngp_2dh_l !:
[1]	232
[1320]	233	INTEGER(iwp), DIMENSION(:,:), ALLOCATABLE :: ngp_2dh_outer_l !:
	234	INTEGER(iwp), DIMENSION(:,:), ALLOCATABLE :: ngp_2dh_s_inner_l !:
[1]	235
[1320]	236	REAL(wp), DIMENSION(1:2) :: volume_flow_area_l !:
	237	REAL(wp), DIMENSION(1:2) :: volume_flow_initial_l !:
[1]	238
[1320]	239	REAL(wp), DIMENSION(:), ALLOCATABLE :: ngp_3d_inner_l !:
	240	REAL(wp), DIMENSION(:), ALLOCATABLE :: ngp_3d_inner_tmp !:
[1]	241
[485]	242
[1402]	243	CALL location_message( 'allocating arrays', .FALSE. )
[1]	244	!
	245	!-- Allocate arrays
	246	ALLOCATE( ngp_2dh(0:statistic_regions), ngp_2dh_l(0:statistic_regions), &
	247	ngp_3d(0:statistic_regions), &
	248	ngp_3d_inner(0:statistic_regions), &
	249	ngp_3d_inner_l(0:statistic_regions), &
[485]	250	ngp_3d_inner_tmp(0:statistic_regions), &
[1]	251	sums_divnew_l(0:statistic_regions), &
	252	sums_divold_l(0:statistic_regions) )
[1195]	253	ALLOCATE( dp_smooth_factor(nzb:nzt), rdf(nzb+1:nzt), rdf_sc(nzb+1:nzt) )
[143]	254	ALLOCATE( ngp_2dh_outer(nzb:nzt+1,0:statistic_regions), &
[1]	255	ngp_2dh_outer_l(nzb:nzt+1,0:statistic_regions), &
[132]	256	ngp_2dh_s_inner(nzb:nzt+1,0:statistic_regions), &
	257	ngp_2dh_s_inner_l(nzb:nzt+1,0:statistic_regions), &
[996]	258	rmask(nysg:nyng,nxlg:nxrg,0:statistic_regions), &
[87]	259	sums(nzb:nzt+1,pr_palm+max_pr_user), &
	260	sums_l(nzb:nzt+1,pr_palm+max_pr_user,0:threads_per_task-1), &
[1]	261	sums_l_l(nzb:nzt+1,0:statistic_regions,0:threads_per_task-1), &
	262	sums_up_fraction_l(10,3,0:statistic_regions), &
[48]	263	sums_wsts_bc_l(nzb:nzt+1,0:statistic_regions), &
[394]	264	ts_value(dots_max,0:statistic_regions) )
[978]	265	ALLOCATE( ptdf_x(nxlg:nxrg), ptdf_y(nysg:nyng) )
[1]	266
[1001]	267	ALLOCATE( rif(nysg:nyng,nxlg:nxrg), shf(nysg:nyng,nxlg:nxrg), &
	268	ts(nysg:nyng,nxlg:nxrg), tswst(nysg:nyng,nxlg:nxrg), &
	269	us(nysg:nyng,nxlg:nxrg), usws(nysg:nyng,nxlg:nxrg), &
	270	uswst(nysg:nyng,nxlg:nxrg), vsws(nysg:nyng,nxlg:nxrg), &
	271	vswst(nysg:nyng,nxlg:nxrg), z0(nysg:nyng,nxlg:nxrg), &
[978]	272	z0h(nysg:nyng,nxlg:nxrg) )
[1]	273
[1010]	274	ALLOCATE( d(nzb+1:nzt,nys:nyn,nxl:nxr), &
	275	kh(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	276	km(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	277	p(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	278	tend(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	279
	280	#if defined( __nopointer )
	281	ALLOCATE( e(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	282	e_p(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	283	pt(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	284	pt_p(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	285	u(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	286	u_p(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	287	v(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	288	v_p(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	289	w(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	290	w_p(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	291	te_m(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	292	tpt_m(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	293	tu_m(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	294	tv_m(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	295	tw_m(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	296	#else
	297	ALLOCATE( e_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	298	e_2(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	299	e_3(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	300	pt_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	301	pt_3(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	302	u_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	303	u_2(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	304	u_3(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	305	v_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	306	v_2(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	307	v_3(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	308	w_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	309	w_2(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
[667]	310	w_3(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[1032]	311	IF ( .NOT. neutral ) THEN
	312	ALLOCATE( pt_2(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	313	ENDIF
[1010]	314	#endif
	315
[673]	316	!
[707]	317	!-- Following array is required for perturbation pressure within the iterative
	318	!-- pressure solvers. For the multistep schemes (Runge-Kutta), array p holds
	319	!-- the weighted average of the substeps and cannot be used in the Poisson
	320	!-- solver.
	321	IF ( psolver == 'sor' ) THEN
	322	ALLOCATE( p_loc(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	323	ELSEIF ( psolver == 'multigrid' ) THEN
	324	!
	325	!-- For performance reasons, multigrid is using one ghost layer only
	326	ALLOCATE( p_loc(nzb:nzt+1,nys-1:nyn+1,nxl-1:nxr+1) )
[673]	327	ENDIF
[1]	328
[1111]	329	!
	330	!-- Array for storing constant coeffficients of the tridiagonal solver
	331	IF ( psolver == 'poisfft' ) THEN
[1212]	332	ALLOCATE( tri(nxl_z:nxr_z,nys_z:nyn_z,0:nz-1,2) )
[1111]	333	ALLOCATE( tric(nxl_z:nxr_z,nys_z:nyn_z,0:nz-1) )
	334	ENDIF
	335
[75]	336	IF ( humidity .OR. passive_scalar ) THEN
[1]	337	!
[75]	338	!-- 2D-humidity/scalar arrays
[1001]	339	ALLOCATE ( qs(nysg:nyng,nxlg:nxrg), &
	340	qsws(nysg:nyng,nxlg:nxrg), &
	341	qswst(nysg:nyng,nxlg:nxrg) )
[1]	342
	343	!
[75]	344	!-- 3D-humidity/scalar arrays
[1010]	345	#if defined( __nopointer )
	346	ALLOCATE( q(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	347	q_p(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	348	tq_m(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	349	#else
[667]	350	ALLOCATE( q_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	351	q_2(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	352	q_3(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[1010]	353	#endif
[1]	354
	355	!
[75]	356	!-- 3D-arrays needed for humidity only
	357	IF ( humidity ) THEN
[1010]	358	#if defined( __nopointer )
	359	ALLOCATE( vpt(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	360	#else
[667]	361	ALLOCATE( vpt_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[1010]	362	#endif
[1]	363
	364	IF ( cloud_physics ) THEN
[1053]	365
[1]	366	!
	367	!-- Liquid water content
[1010]	368	#if defined( __nopointer )
	369	ALLOCATE ( ql(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	370	#else
[667]	371	ALLOCATE ( ql_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[1010]	372	#endif
[72]	373	!
	374	!-- Precipitation amount and rate (only needed if output is switched)
[667]	375	ALLOCATE( precipitation_amount(nysg:nyng,nxlg:nxrg), &
	376	precipitation_rate(nysg:nyng,nxlg:nxrg) )
[1053]	377
	378	IF ( icloud_scheme == 0 ) THEN
	379	!
[1115]	380	!-- 1D-arrays
	381	ALLOCATE ( nc_1d(nzb:nzt+1), pt_1d(nzb:nzt+1), &
	382	q_1d(nzb:nzt+1), qc_1d(nzb:nzt+1) )
[1053]	383	!
[1115]	384	!-- 3D-cloud water content
[1053]	385	#if defined( __nopointer )
[1115]	386	ALLOCATE( qc(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[1053]	387	#else
[1115]	388	ALLOCATE( qc_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[1053]	389	#endif
[1115]	390
	391	IF ( precipitation ) THEN
[1053]	392	!
[1115]	393	!-- 1D-arrays
	394	ALLOCATE ( nr_1d(nzb:nzt+1), qr_1d(nzb:nzt+1) )
[1361]	395
[1115]	396	!
	397	!-- 2D-rain water content and rain drop concentration arrays
	398	ALLOCATE ( qrs(nysg:nyng,nxlg:nxrg), &
	399	qrsws(nysg:nyng,nxlg:nxrg), &
	400	qrswst(nysg:nyng,nxlg:nxrg), &
	401	nrs(nysg:nyng,nxlg:nxrg), &
	402	nrsws(nysg:nyng,nxlg:nxrg), &
	403	nrswst(nysg:nyng,nxlg:nxrg) )
	404	!
	405	!-- 3D-rain water content, rain drop concentration arrays
	406	#if defined( __nopointer )
	407	ALLOCATE( nr(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	408	nr_p(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	409	qr(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	410	qr_p(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	411	tnr_m(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	412	tqr_m(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	413	#else
	414	ALLOCATE( nr_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	415	nr_2(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	416	nr_3(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	417	qr_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	418	qr_2(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	419	qr_3(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	420	#endif
	421	!
	422	!-- 3d-precipitation rate
[1053]	423	ALLOCATE( prr(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	424	ENDIF
	425
	426	ENDIF
[1]	427	ENDIF
	428
	429	IF ( cloud_droplets ) THEN
	430	!
[1010]	431	!-- Liquid water content, change in liquid water content
	432	#if defined( __nopointer )
	433	ALLOCATE ( ql(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	434	ql_c(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	435	#else
[667]	436	ALLOCATE ( ql_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
[1010]	437	ql_2(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	438	#endif
	439	!
	440	!-- Real volume of particles (with weighting), volume of particles
	441	ALLOCATE ( ql_v(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
[667]	442	ql_vp(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[1]	443	ENDIF
	444
	445	ENDIF
	446
	447	ENDIF
	448
[94]	449	IF ( ocean ) THEN
[1001]	450	ALLOCATE( saswsb(nysg:nyng,nxlg:nxrg), &
	451	saswst(nysg:nyng,nxlg:nxrg) )
[1010]	452	#if defined( __nopointer )
	453	ALLOCATE( prho(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	454	rho(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	455	sa(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	456	sa_p(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	457	tsa_m(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
	458	#else
[667]	459	ALLOCATE( prho_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	460	rho_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	461	sa_1(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	462	sa_2(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	463	sa_3(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[388]	464	prho => prho_1
	465	rho => rho_1 ! routines calc_mean_profile and diffusion_e require
	466	! density to be apointer
[1010]	467	#endif
[108]	468	IF ( humidity_remote ) THEN
[667]	469	ALLOCATE( qswst_remote(nysg:nyng,nxlg:nxrg))
[1340]	470	qswst_remote = 0.0_wp
[108]	471	ENDIF
[94]	472	ENDIF
	473
[1]	474	!
	475	!-- 3D-array for storing the dissipation, needed for calculating the sgs
	476	!-- particle velocities
[1171]	477	IF ( use_sgs_for_particles .OR. wang_kernel .OR. turbulence .OR. &
	478	num_acc_per_node > 0 ) THEN
[1153]	479	ALLOCATE( diss(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[1]	480	ENDIF
	481
[1340]	482	IF ( dt_dosp /= 9999999.9_wp ) THEN
[1]	483	ALLOCATE( spectrum_x( 1:nx/2, 1:10, 1:10 ), &
	484	spectrum_y( 1:ny/2, 1:10, 1:10 ) )
[1340]	485	spectrum_x = 0.0_wp
	486	spectrum_y = 0.0_wp
[1]	487	ENDIF
	488
	489	!
[1299]	490	!-- 1D-array for large scale subsidence velocity
[1361]	491	IF ( .NOT. ALLOCATED( w_subs ) ) THEN
	492	ALLOCATE ( w_subs(nzb:nzt+1) )
	493	w_subs = 0.0_wp
	494	ENDIF
[1299]	495
	496	!
[1400]	497	!-- ID-array and state-space-array for the parallel random number generator
	498	IF ( random_generator == 'random-parallel' ) THEN
	499	ALLOCATE ( seq_random_array(5,nysg:nyng,nxlg:nxrg) )
	500	ALLOCATE ( id_random_array(0:ny,0:nx) )
	501	seq_random_array = 0
	502	id_random_array = 0
	503	ENDIF
	504
	505	!
[138]	506	!-- 3D-arrays for the leaf area density and the canopy drag coefficient
	507	IF ( plant_canopy ) THEN
[667]	508	ALLOCATE ( lad_s(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	509	lad_u(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	510	lad_v(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	511	lad_w(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
	512	cdc(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[153]	513
	514	IF ( passive_scalar ) THEN
[996]	515	ALLOCATE ( sls(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
[667]	516	sec(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[153]	517	ENDIF
	518
[1340]	519	IF ( cthf /= 0.0_wp ) THEN
[996]	520	ALLOCATE ( lai(nzb:nzt+1,nysg:nyng,nxlg:nxrg), &
[667]	521	canopy_heat_flux(nzb:nzt+1,nysg:nyng,nxlg:nxrg) )
[153]	522	ENDIF
	523
[138]	524	ENDIF
	525
	526	!
[51]	527	!-- 4D-array for storing the Rif-values at vertical walls
	528	IF ( topography /= 'flat' ) THEN
[667]	529	ALLOCATE( rif_wall(nzb:nzt+1,nysg:nyng,nxlg:nxrg,1:4) )
[1340]	530	rif_wall = 0.0_wp
[51]	531	ENDIF
	532
	533	!
[106]	534	!-- Arrays to store velocity data from t-dt and the phase speeds which
	535	!-- are needed for radiation boundary conditions
[73]	536	IF ( outflow_l ) THEN
[667]	537	ALLOCATE( u_m_l(nzb:nzt+1,nysg:nyng,1:2), &
	538	v_m_l(nzb:nzt+1,nysg:nyng,0:1), &
	539	w_m_l(nzb:nzt+1,nysg:nyng,0:1) )
[73]	540	ENDIF
	541	IF ( outflow_r ) THEN
[667]	542	ALLOCATE( u_m_r(nzb:nzt+1,nysg:nyng,nx-1:nx), &
	543	v_m_r(nzb:nzt+1,nysg:nyng,nx-1:nx), &
	544	w_m_r(nzb:nzt+1,nysg:nyng,nx-1:nx) )
[73]	545	ENDIF
[106]	546	IF ( outflow_l .OR. outflow_r ) THEN
[667]	547	ALLOCATE( c_u(nzb:nzt+1,nysg:nyng), c_v(nzb:nzt+1,nysg:nyng), &
	548	c_w(nzb:nzt+1,nysg:nyng) )
[106]	549	ENDIF
[73]	550	IF ( outflow_s ) THEN
[667]	551	ALLOCATE( u_m_s(nzb:nzt+1,0:1,nxlg:nxrg), &
	552	v_m_s(nzb:nzt+1,1:2,nxlg:nxrg), &
	553	w_m_s(nzb:nzt+1,0:1,nxlg:nxrg) )
[73]	554	ENDIF
	555	IF ( outflow_n ) THEN
[667]	556	ALLOCATE( u_m_n(nzb:nzt+1,ny-1:ny,nxlg:nxrg), &
	557	v_m_n(nzb:nzt+1,ny-1:ny,nxlg:nxrg), &
	558	w_m_n(nzb:nzt+1,ny-1:ny,nxlg:nxrg) )
[73]	559	ENDIF
[106]	560	IF ( outflow_s .OR. outflow_n ) THEN
[667]	561	ALLOCATE( c_u(nzb:nzt+1,nxlg:nxrg), c_v(nzb:nzt+1,nxlg:nxrg), &
	562	c_w(nzb:nzt+1,nxlg:nxrg) )
[106]	563	ENDIF
[996]	564	IF ( outflow_l .OR. outflow_r .OR. outflow_s .OR. outflow_n ) THEN
[978]	565	ALLOCATE( c_u_m_l(nzb:nzt+1), c_v_m_l(nzb:nzt+1), c_w_m_l(nzb:nzt+1) )
	566	ALLOCATE( c_u_m(nzb:nzt+1), c_v_m(nzb:nzt+1), c_w_m(nzb:nzt+1) )
	567	ENDIF
[73]	568
[978]	569
[1010]	570	#if ! defined( __nopointer )
[73]	571	!
[1]	572	!-- Initial assignment of the pointers
[1001]	573	e => e_1; e_p => e_2; te_m => e_3
[1032]	574	IF ( .NOT. neutral ) THEN
	575	pt => pt_1; pt_p => pt_2; tpt_m => pt_3
	576	ELSE
	577	pt => pt_1; pt_p => pt_1; tpt_m => pt_3
	578	ENDIF
[1001]	579	u => u_1; u_p => u_2; tu_m => u_3
	580	v => v_1; v_p => v_2; tv_m => v_3
	581	w => w_1; w_p => w_2; tw_m => w_3
[1]	582
[1001]	583	IF ( humidity .OR. passive_scalar ) THEN
	584	q => q_1; q_p => q_2; tq_m => q_3
[1053]	585	IF ( humidity ) THEN
	586	vpt => vpt_1
	587	IF ( cloud_physics ) THEN
	588	ql => ql_1
	589	IF ( icloud_scheme == 0 ) THEN
[1115]	590	qc => qc_1
	591	IF ( precipitation ) THEN
	592	qr => qr_1; qr_p => qr_2; tqr_m => qr_3
	593	nr => nr_1; nr_p => nr_2; tnr_m => nr_3
	594	ENDIF
[1053]	595	ENDIF
	596	ENDIF
	597	ENDIF
[1001]	598	IF ( cloud_droplets ) THEN
	599	ql => ql_1
	600	ql_c => ql_2
[1]	601	ENDIF
[1001]	602	ENDIF
[1]	603
[1001]	604	IF ( ocean ) THEN
	605	sa => sa_1; sa_p => sa_2; tsa_m => sa_3
	606	ENDIF
[1010]	607	#endif
[1]	608
	609	!
[709]	610	!-- Allocate arrays containing the RK coefficient for calculation of
	611	!-- perturbation pressure and turbulent fluxes. At this point values are
	612	!-- set for pressure calculation during initialization (where no timestep
	613	!-- is done). Further below the values needed within the timestep scheme
	614	!-- will be set.
	615	ALLOCATE( weight_substep(1:intermediate_timestep_count_max), &
[673]	616	weight_pres(1:intermediate_timestep_count_max) )
[1340]	617	weight_substep = 1.0_wp
	618	weight_pres = 1.0_wp
[709]	619	intermediate_timestep_count = 1 ! needed when simulated_time = 0.0
[673]	620
[1402]	621	CALL location_message( 'finished', .TRUE. )
[673]	622	!
[1]	623	!-- Initialize model variables
[147]	624	IF ( TRIM( initializing_actions ) /= 'read_restart_data' .AND. &
[328]	625	TRIM( initializing_actions ) /= 'cyclic_fill' ) THEN
[1]	626	!
	627	!-- First model run of a possible job queue.
	628	!-- Initial profiles of the variables must be computes.
	629	IF ( INDEX( initializing_actions, 'set_1d-model_profiles' ) /= 0 ) THEN
[1384]	630
[1402]	631	CALL location_message( 'initializing with 1D model profiles', .FALSE. )
[1]	632	!
	633	!-- Use solutions of the 1D model as initial profiles,
	634	!-- start 1D model
	635	CALL init_1d_model
	636	!
	637	!-- Transfer initial profiles to the arrays of the 3D model
[667]	638	DO i = nxlg, nxrg
	639	DO j = nysg, nyng
[1]	640	e(:,j,i) = e1d
	641	kh(:,j,i) = kh1d
	642	km(:,j,i) = km1d
	643	pt(:,j,i) = pt_init
	644	u(:,j,i) = u1d
	645	v(:,j,i) = v1d
	646	ENDDO
	647	ENDDO
	648
[75]	649	IF ( humidity .OR. passive_scalar ) THEN
[667]	650	DO i = nxlg, nxrg
	651	DO j = nysg, nyng
[1]	652	q(:,j,i) = q_init
	653	ENDDO
	654	ENDDO
[1353]	655	IF ( cloud_physics .AND. icloud_scheme == 0 .AND. &
[1115]	656	precipitation ) THEN
[1053]	657	DO i = nxlg, nxrg
	658	DO j = nysg, nyng
[1340]	659	qr(:,j,i) = 0.0_wp
	660	nr(:,j,i) = 0.0_wp
[1053]	661	ENDDO
	662	ENDDO
[1115]	663	!
	664	!-- Initialze nc_1d with default value
	665	nc_1d(:) = nc_const
	666
[1053]	667	ENDIF
[1]	668	ENDIF
	669
	670	IF ( .NOT. constant_diffusion ) THEN
[667]	671	DO i = nxlg, nxrg
	672	DO j = nysg, nyng
[1]	673	e(:,j,i) = e1d
	674	ENDDO
	675	ENDDO
	676	!
	677	!-- Store initial profiles for output purposes etc.
	678	hom(:,1,25,:) = SPREAD( l1d, 2, statistic_regions+1 )
	679
	680	IF ( prandtl_layer ) THEN
	681	rif = rif1d(nzb+1)
[1340]	682	ts = 0.0_wp ! could actually be computed more accurately in the
	683	! 1D model. Update when opportunity arises.
[1]	684	us = us1d
	685	usws = usws1d
	686	vsws = vsws1d
	687	ELSE
[1340]	688	ts = 0.0_wp ! must be set, because used in
	689	rif = 0.0_wp ! flowste
	690	us = 0.0_wp
	691	usws = 0.0_wp
	692	vsws = 0.0_wp
[1]	693	ENDIF
	694
	695	ELSE
[1340]	696	e = 0.0_wp ! must be set, because used in
	697	rif = 0.0_wp ! flowste
	698	ts = 0.0_wp
	699	us = 0.0_wp
	700	usws = 0.0_wp
	701	vsws = 0.0_wp
[1]	702	ENDIF
[102]	703	uswst = top_momentumflux_u
	704	vswst = top_momentumflux_v
[1]	705
	706	!
	707	!-- In every case qs = 0.0 (see also pt)
	708	!-- This could actually be computed more accurately in the 1D model.
	709	!-- Update when opportunity arises!
[1053]	710	IF ( humidity .OR. passive_scalar ) THEN
[1340]	711	qs = 0.0_wp
[1353]	712	IF ( cloud_physics .AND. icloud_scheme == 0 .AND. &
[1115]	713	precipitation ) THEN
[1340]	714	qrs = 0.0_wp
	715	nrs = 0.0_wp
[1053]	716	ENDIF
	717	ENDIF
[1]	718
	719	!
	720	!-- inside buildings set velocities back to zero
	721	IF ( topography /= 'flat' ) THEN
	722	DO i = nxl-1, nxr+1
	723	DO j = nys-1, nyn+1
[1340]	724	u(nzb:nzb_u_inner(j,i),j,i) = 0.0_wp
	725	v(nzb:nzb_v_inner(j,i),j,i) = 0.0_wp
[1]	726	ENDDO
	727	ENDDO
[667]	728
[1]	729	!
	730	!-- WARNING: The extra boundary conditions set after running the
	731	!-- ------- 1D model impose an error on the divergence one layer
	732	!-- below the topography; need to correct later
	733	!-- ATTENTION: Provisional correction for Piacsek & Williams
	734	!-- --------- advection scheme: keep u and v zero one layer below
	735	!-- the topography.
[667]	736	IF ( ibc_uv_b == 1 ) THEN
	737	!
[1]	738	!-- Neumann condition
	739	DO i = nxl-1, nxr+1
	740	DO j = nys-1, nyn+1
	741	IF ( nzb_u_inner(j,i) == 0 ) u(0,j,i) = u(1,j,i)
	742	IF ( nzb_v_inner(j,i) == 0 ) v(0,j,i) = v(1,j,i)
	743	ENDDO
	744	ENDDO
	745
	746	ENDIF
	747
	748	ENDIF
	749
[1402]	750	CALL location_message( 'finished', .TRUE. )
[1384]	751
[1]	752	ELSEIF ( INDEX(initializing_actions, 'set_constant_profiles') /= 0 ) &
	753	THEN
[1241]	754
[1402]	755	CALL location_message( 'initializing with constant profiles', .FALSE. )
[1]	756	!
[1241]	757	!-- Overwrite initial profiles in case of nudging
	758	IF ( nudging ) THEN
	759	pt_init = ptnudge(:,1)
	760	u_init = unudge(:,1)
	761	v_init = vnudge(:,1)
	762	IF ( humidity .OR. passive_scalar ) THEN
	763	q_init = qnudge(:,1)
	764	ENDIF
	765
	766	WRITE( message_string, * ) 'Initial profiles of u, v and ', &
	767	'scalars from NUDGING_DATA are used.'
	768	CALL message( 'init_3d_model', 'PA0370', 0, 0, 0, 6, 0 )
	769	ENDIF
	770
	771	!
[1]	772	!-- Use constructed initial profiles (velocity constant with height,
	773	!-- temperature profile with constant gradient)
[667]	774	DO i = nxlg, nxrg
	775	DO j = nysg, nyng
[1]	776	pt(:,j,i) = pt_init
	777	u(:,j,i) = u_init
	778	v(:,j,i) = v_init
	779	ENDDO
	780	ENDDO
[75]	781
[1]	782	!
[292]	783	!-- Set initial horizontal velocities at the lowest computational grid
	784	!-- levels to zero in order to avoid too small time steps caused by the
	785	!-- diffusion limit in the initial phase of a run (at k=1, dz/2 occurs
	786	!-- in the limiting formula!). The original values are stored to be later
	787	!-- used for volume flow control.
[1406]	788	IF ( ibc_uv_b /= 1 ) THEN
	789	DO i = nxlg, nxrg
	790	DO j = nysg, nyng
	791	u(nzb:nzb_u_inner(j,i)+1,j,i) = 0.0_wp
	792	v(nzb:nzb_v_inner(j,i)+1,j,i) = 0.0_wp
	793	ENDDO
[1]	794	ENDDO
[1406]	795	ENDIF
[1]	796
[75]	797	IF ( humidity .OR. passive_scalar ) THEN
[667]	798	DO i = nxlg, nxrg
	799	DO j = nysg, nyng
[1]	800	q(:,j,i) = q_init
	801	ENDDO
	802	ENDDO
[1115]	803	IF ( cloud_physics .AND. icloud_scheme == 0 ) THEN
	804	!
	805	!-- Initialze nc_1d with default value
	806	nc_1d(:) = nc_const
	807
	808	IF ( precipitation ) THEN
	809	DO i = nxlg, nxrg
	810	DO j = nysg, nyng
[1340]	811	qr(:,j,i) = 0.0_wp
	812	nr(:,j,i) = 0.0_wp
[1115]	813	ENDDO
[1053]	814	ENDDO
[1115]	815	ENDIF
	816
[1053]	817	ENDIF
[1]	818	ENDIF
	819
[94]	820	IF ( ocean ) THEN
[667]	821	DO i = nxlg, nxrg
	822	DO j = nysg, nyng
[94]	823	sa(:,j,i) = sa_init
	824	ENDDO
	825	ENDDO
	826	ENDIF
[1]	827
	828	IF ( constant_diffusion ) THEN
	829	km = km_constant
	830	kh = km / prandtl_number
[1340]	831	e = 0.0_wp
	832	ELSEIF ( e_init > 0.0_wp ) THEN
[108]	833	DO k = nzb+1, nzt
[1340]	834	km(k,:,:) = 0.1_wp * l_grid(k) * SQRT( e_init )
[108]	835	ENDDO
	836	km(nzb,:,:) = km(nzb+1,:,:)
	837	km(nzt+1,:,:) = km(nzt,:,:)
	838	kh = km / prandtl_number
	839	e = e_init
[1]	840	ELSE
[108]	841	IF ( .NOT. ocean ) THEN
[1340]	842	kh = 0.01_wp ! there must exist an initial diffusion, because
	843	km = 0.01_wp ! otherwise no TKE would be produced by the
[108]	844	! production terms, as long as not yet
	845	! e = (u/cm)*2 at k=nzb+1
	846	ELSE
[1340]	847	kh = 0.00001_wp
	848	km = 0.00001_wp
[108]	849	ENDIF
[1340]	850	e = 0.0_wp
[1]	851	ENDIF
[1340]	852	rif = 0.0_wp
	853	ts = 0.0_wp
	854	us = 0.0_wp
	855	usws = 0.0_wp
[102]	856	uswst = top_momentumflux_u
[1340]	857	vsws = 0.0_wp
[102]	858	vswst = top_momentumflux_v
[1340]	859	IF ( humidity .OR. passive_scalar ) qs = 0.0_wp
[1]	860
	861	!
	862	!-- Compute initial temperature field and other constants used in case
	863	!-- of a sloping surface
	864	IF ( sloping_surface ) CALL init_slope
	865
[1402]	866	CALL location_message( 'finished', .TRUE. )
[1384]	867
[46]	868	ELSEIF ( INDEX(initializing_actions, 'by_user') /= 0 ) &
	869	THEN
[1384]	870
[1402]	871	CALL location_message( 'initializing by user', .FALSE. )
[46]	872	!
	873	!-- Initialization will completely be done by the user
	874	CALL user_init_3d_model
	875
[1402]	876	CALL location_message( 'finished', .TRUE. )
[1384]	877
[1]	878	ENDIF
[1384]	879
[1402]	880	CALL location_message( 'initializing statistics, boundary conditions, etc.', &
	881	.FALSE. )
[1384]	882
[667]	883	!
	884	!-- Bottom boundary
	885	IF ( ibc_uv_b == 0 .OR. ibc_uv_b == 2 ) THEN
[1340]	886	u(nzb,:,:) = 0.0_wp
	887	v(nzb,:,:) = 0.0_wp
[667]	888	ENDIF
[1]	889
	890	!
[151]	891	!-- Apply channel flow boundary condition
[132]	892	IF ( TRIM( bc_uv_t ) == 'dirichlet_0' ) THEN
[1340]	893	u(nzt+1,:,:) = 0.0_wp
	894	v(nzt+1,:,:) = 0.0_wp
[132]	895	ENDIF
	896
	897	!
[1]	898	!-- Calculate virtual potential temperature
[1340]	899	IF ( humidity ) vpt = pt * ( 1.0_wp + 0.61_wp * q )
[1]	900
	901	!
	902	!-- Store initial profiles for output purposes etc.
	903	hom(:,1,5,:) = SPREAD( u(:,nys,nxl), 2, statistic_regions+1 )
	904	hom(:,1,6,:) = SPREAD( v(:,nys,nxl), 2, statistic_regions+1 )
[667]	905	IF ( ibc_uv_b == 0 .OR. ibc_uv_b == 2) THEN
[1340]	906	hom(nzb,1,5,:) = 0.0_wp
	907	hom(nzb,1,6,:) = 0.0_wp
[1]	908	ENDIF
	909	hom(:,1,7,:) = SPREAD( pt(:,nys,nxl), 2, statistic_regions+1 )
	910	hom(:,1,23,:) = SPREAD( km(:,nys,nxl), 2, statistic_regions+1 )
	911	hom(:,1,24,:) = SPREAD( kh(:,nys,nxl), 2, statistic_regions+1 )
	912
[97]	913	IF ( ocean ) THEN
	914	!
	915	!-- Store initial salinity profile
	916	hom(:,1,26,:) = SPREAD( sa(:,nys,nxl), 2, statistic_regions+1 )
	917	ENDIF
[1]	918
[75]	919	IF ( humidity ) THEN
[1]	920	!
	921	!-- Store initial profile of total water content, virtual potential
	922	!-- temperature
	923	hom(:,1,26,:) = SPREAD( q(:,nys,nxl), 2, statistic_regions+1 )
	924	hom(:,1,29,:) = SPREAD( vpt(:,nys,nxl), 2, statistic_regions+1 )
	925	IF ( cloud_physics .OR. cloud_droplets ) THEN
	926	!
	927	!-- Store initial profile of specific humidity and potential
	928	!-- temperature
	929	hom(:,1,27,:) = SPREAD( q(:,nys,nxl), 2, statistic_regions+1 )
	930	hom(:,1,28,:) = SPREAD( pt(:,nys,nxl), 2, statistic_regions+1 )
	931	ENDIF
	932	ENDIF
	933
	934	IF ( passive_scalar ) THEN
	935	!
	936	!-- Store initial scalar profile
	937	hom(:,1,26,:) = SPREAD( q(:,nys,nxl), 2, statistic_regions+1 )
	938	ENDIF
	939
	940	!
[1400]	941	!-- Initialize the random number generators (from numerical recipes)
	942	CALL random_function_ini
	943	IF ( random_generator == 'random-parallel' ) THEN
	944	CALL random_function_ini
	945	!- asigning an ID to every vertical gridpoint column
	946	DO j=0,ny
	947	DO i=0,nx
	948	id_random_array(j,i) = 1000000*i + j
	949	END DO
	950	ENDDO
	951	!- executing the initial ran_parallel
	952	DO j = nysg, nyng
	953	DO i = nxlg, nxrg
	954	CALL random_seed_parallel (random_sequence=id_random_array(j, i))
	955	CALL random_number_parallel (random_dummy)
	956	CALL random_seed_parallel (get=seq_random_array(:, j, i))
	957	END DO
	958	ENDDO
	959	ENDIF
	960
	961	!
[19]	962	!-- Initialize fluxes at bottom surface
[1]	963	IF ( use_surface_fluxes ) THEN
	964
	965	IF ( constant_heatflux ) THEN
	966	!
	967	!-- Heat flux is prescribed
	968	IF ( random_heatflux ) THEN
	969	CALL disturb_heatflux
	970	ELSE
	971	shf = surface_heatflux
	972	!
[1241]	973	!-- Initialize shf with data from external file LSF_DATA
	974	IF ( large_scale_forcing .AND. lsf_surf ) THEN
	975	CALL ls_forcing_surf ( simulated_time )
	976	ENDIF
	977
	978	!
[1]	979	!-- Over topography surface_heatflux is replaced by wall_heatflux(0)
	980	IF ( TRIM( topography ) /= 'flat' ) THEN
[667]	981	DO i = nxlg, nxrg
	982	DO j = nysg, nyng
[1]	983	IF ( nzb_s_inner(j,i) /= 0 ) THEN
	984	shf(j,i) = wall_heatflux(0)
	985	ENDIF
	986	ENDDO
	987	ENDDO
	988	ENDIF
	989	ENDIF
	990	ENDIF
	991
	992	!
	993	!-- Determine the near-surface water flux
[75]	994	IF ( humidity .OR. passive_scalar ) THEN
[1115]	995	IF ( cloud_physics .AND. icloud_scheme == 0 .AND. &
	996	precipitation ) THEN
[1340]	997	qrsws = 0.0_wp
	998	nrsws = 0.0_wp
[1053]	999	ENDIF
[1]	1000	IF ( constant_waterflux ) THEN
	1001	qsws = surface_waterflux
[407]	1002	!
	1003	!-- Over topography surface_waterflux is replaced by
	1004	!-- wall_humidityflux(0)
	1005	IF ( TRIM( topography ) /= 'flat' ) THEN
	1006	wall_qflux = wall_humidityflux
[667]	1007	DO i = nxlg, nxrg
	1008	DO j = nysg, nyng
[407]	1009	IF ( nzb_s_inner(j,i) /= 0 ) THEN
	1010	qsws(j,i) = wall_qflux(0)
	1011	ENDIF
	1012	ENDDO
	1013	ENDDO
	1014	ENDIF
[1]	1015	ENDIF
	1016	ENDIF
	1017
	1018	ENDIF
	1019
	1020	!
[19]	1021	!-- Initialize fluxes at top surface
[94]	1022	!-- Currently, only the heatflux and salinity flux can be prescribed.
	1023	!-- The latent flux is zero in this case!
[19]	1024	IF ( use_top_fluxes ) THEN
	1025
	1026	IF ( constant_top_heatflux ) THEN
	1027	!
	1028	!-- Heat flux is prescribed
	1029	tswst = top_heatflux
	1030
[1053]	1031	IF ( humidity .OR. passive_scalar ) THEN
[1340]	1032	qswst = 0.0_wp
[1115]	1033	IF ( cloud_physics .AND. icloud_scheme == 0 .AND. &
	1034	precipitation ) THEN
[1340]	1035	nrswst = 0.0_wp
	1036	qrswst = 0.0_wp
[1053]	1037	ENDIF
	1038	ENDIF
[94]	1039
	1040	IF ( ocean ) THEN
[95]	1041	saswsb = bottom_salinityflux
[94]	1042	saswst = top_salinityflux
	1043	ENDIF
[102]	1044	ENDIF
[19]	1045
[102]	1046	!
	1047	!-- Initialization in case of a coupled model run
	1048	IF ( coupling_mode == 'ocean_to_atmosphere' ) THEN
[1340]	1049	tswst = 0.0_wp
[102]	1050	ENDIF
	1051
[19]	1052	ENDIF
	1053
	1054	!
[1]	1055	!-- Initialize Prandtl layer quantities
	1056	IF ( prandtl_layer ) THEN
	1057
	1058	z0 = roughness_length
[978]	1059	z0h = z0h_factor * z0
[1]	1060
	1061	IF ( .NOT. constant_heatflux ) THEN
	1062	!
	1063	!-- Surface temperature is prescribed. Here the heat flux cannot be
	1064	!-- simply estimated, because therefore rif, u* and theta* would have
	1065	!-- to be computed by iteration. This is why the heat flux is assumed
	1066	!-- to be zero before the first time step. It approaches its correct
	1067	!-- value in the course of the first few time steps.
[1340]	1068	shf = 0.0_wp
[1]	1069	ENDIF
	1070
[75]	1071	IF ( humidity .OR. passive_scalar ) THEN
[1340]	1072	IF ( .NOT. constant_waterflux ) qsws = 0.0_wp
[1115]	1073	IF ( cloud_physics .AND. icloud_scheme == 0 .AND. &
	1074	precipitation ) THEN
[1340]	1075	qrsws = 0.0_wp
	1076	nrsws = 0.0_wp
[1053]	1077	ENDIF
[1]	1078	ENDIF
	1079
	1080	ENDIF
	1081
[1179]	1082	!
	1083	!-- Set the reference state to be used in the buoyancy terms (for ocean runs
	1084	!-- the reference state will be set (overwritten) in init_ocean)
	1085	IF ( use_single_reference_value ) THEN
	1086	IF ( .NOT. humidity ) THEN
	1087	ref_state(:) = pt_reference
	1088	ELSE
	1089	ref_state(:) = vpt_reference
	1090	ENDIF
	1091	ELSE
	1092	IF ( .NOT. humidity ) THEN
	1093	ref_state(:) = pt_init(:)
	1094	ELSE
	1095	ref_state(:) = vpt(:,nys,nxl)
	1096	ENDIF
	1097	ENDIF
[152]	1098
	1099	!
[707]	1100	!-- For the moment, vertical velocity is zero
[1340]	1101	w = 0.0_wp
[1]	1102
	1103	!
	1104	!-- Initialize array sums (must be defined in first call of pres)
[1340]	1105	sums = 0.0_wp
[1]	1106
	1107	!
[707]	1108	!-- In case of iterative solvers, p must get an initial value
[1340]	1109	IF ( psolver == 'multigrid' .OR. psolver == 'sor' ) p = 0.0_wp
[707]	1110
	1111	!
[72]	1112	!-- Treating cloud physics, liquid water content and precipitation amount
	1113	!-- are zero at beginning of the simulation
	1114	IF ( cloud_physics ) THEN
[1340]	1115	ql = 0.0_wp
	1116	IF ( precipitation ) precipitation_amount = 0.0_wp
[1115]	1117	IF ( icloud_scheme == 0 ) THEN
[1340]	1118	qc = 0.0_wp
[1115]	1119	nc_1d = nc_const
	1120	ENDIF
[72]	1121	ENDIF
[673]	1122	!
[1]	1123	!-- Impose vortex with vertical axis on the initial velocity profile
	1124	IF ( INDEX( initializing_actions, 'initialize_vortex' ) /= 0 ) THEN
	1125	CALL init_rankine
	1126	ENDIF
	1127
	1128	!
	1129	!-- Impose temperature anomaly (advection test only)
	1130	IF ( INDEX( initializing_actions, 'initialize_ptanom' ) /= 0 ) THEN
	1131	CALL init_pt_anomaly
	1132	ENDIF
	1133
	1134	!
	1135	!-- If required, change the surface temperature at the start of the 3D run
[1340]	1136	IF ( pt_surface_initial_change /= 0.0_wp ) THEN
[1]	1137	pt(nzb,:,:) = pt(nzb,:,:) + pt_surface_initial_change
	1138	ENDIF
	1139
	1140	!
	1141	!-- If required, change the surface humidity/scalar at the start of the 3D
	1142	!-- run
[75]	1143	IF ( ( humidity .OR. passive_scalar ) .AND. &
[1340]	1144	q_surface_initial_change /= 0.0_wp ) THEN
[1]	1145	q(nzb,:,:) = q(nzb,:,:) + q_surface_initial_change
	1146	ENDIF
	1147
	1148	!
	1149	!-- Initialize old and new time levels.
[1340]	1150	te_m = 0.0_wp; tpt_m = 0.0_wp; tu_m = 0.0_wp; tv_m = 0.0_wp; tw_m = 0.0_wp
[1]	1151	e_p = e; pt_p = pt; u_p = u; v_p = v; w_p = w
	1152
[75]	1153	IF ( humidity .OR. passive_scalar ) THEN
[1340]	1154	tq_m = 0.0_wp
[1]	1155	q_p = q
[1115]	1156	IF ( cloud_physics .AND. icloud_scheme == 0 .AND. &
	1157	precipitation ) THEN
[1340]	1158	tqr_m = 0.0_wp
[1053]	1159	qr_p = qr
[1340]	1160	tnr_m = 0.0_wp
[1053]	1161	nr_p = nr
	1162	ENDIF
[1]	1163	ENDIF
	1164
[94]	1165	IF ( ocean ) THEN
[1340]	1166	tsa_m = 0.0_wp
[94]	1167	sa_p = sa
	1168	ENDIF
[667]	1169
[1402]	1170	CALL location_message( 'finished', .TRUE. )
[94]	1171
[147]	1172	ELSEIF ( TRIM( initializing_actions ) == 'read_restart_data' .OR. &
[667]	1173	TRIM( initializing_actions ) == 'cyclic_fill' ) &
[1]	1174	THEN
[1384]	1175
[1402]	1176	CALL location_message( 'initializing in case of restart / cyclic_fill', &
	1177	.FALSE. )
[1]	1178	!
[767]	1179	!-- When reading data for cyclic fill of 3D prerun data files, read
	1180	!-- some of the global variables from the restart file which are required
	1181	!-- for initializing the inflow
[328]	1182	IF ( TRIM( initializing_actions ) == 'cyclic_fill' ) THEN
[559]	1183
[759]	1184	DO i = 0, io_blocks-1
	1185	IF ( i == io_group ) THEN
	1186	CALL read_parts_of_var_list
	1187	CALL close_file( 13 )
	1188	ENDIF
	1189	#if defined( __parallel )
	1190	CALL MPI_BARRIER( comm2d, ierr )
	1191	#endif
	1192	ENDDO
[328]	1193
[767]	1194	ENDIF
	1195
[151]	1196	!
[767]	1197	!-- Read binary data from restart file
	1198	DO i = 0, io_blocks-1
	1199	IF ( i == io_group ) THEN
	1200	CALL read_3d_binary
	1201	ENDIF
	1202	#if defined( __parallel )
	1203	CALL MPI_BARRIER( comm2d, ierr )
	1204	#endif
	1205	ENDDO
	1206
[328]	1207	!
[767]	1208	!-- Initialization of the turbulence recycling method
	1209	IF ( TRIM( initializing_actions ) == 'cyclic_fill' .AND. &
	1210	turbulent_inflow ) THEN
	1211	!
	1212	!-- First store the profiles to be used at the inflow.
	1213	!-- These profiles are the (temporally) and horizontally averaged vertical
	1214	!-- profiles from the prerun. Alternatively, prescribed profiles
	1215	!-- for u,v-components can be used.
	1216	ALLOCATE( mean_inflow_profiles(nzb:nzt+1,5) )
[151]	1217
[767]	1218	IF ( use_prescribed_profile_data ) THEN
	1219	mean_inflow_profiles(:,1) = u_init ! u
	1220	mean_inflow_profiles(:,2) = v_init ! v
	1221	ELSE
[328]	1222	mean_inflow_profiles(:,1) = hom_sum(:,1,0) ! u
	1223	mean_inflow_profiles(:,2) = hom_sum(:,2,0) ! v
[767]	1224	ENDIF
	1225	mean_inflow_profiles(:,4) = hom_sum(:,4,0) ! pt
	1226	mean_inflow_profiles(:,5) = hom_sum(:,8,0) ! e
[151]	1227
	1228	!
[767]	1229	!-- If necessary, adjust the horizontal flow field to the prescribed
	1230	!-- profiles
	1231	IF ( use_prescribed_profile_data ) THEN
	1232	DO i = nxlg, nxrg
[667]	1233	DO j = nysg, nyng
[328]	1234	DO k = nzb, nzt+1
[767]	1235	u(k,j,i) = u(k,j,i) - hom_sum(k,1,0) + u_init(k)
	1236	v(k,j,i) = v(k,j,i) - hom_sum(k,2,0) + v_init(k)
[328]	1237	ENDDO
[151]	1238	ENDDO
[767]	1239	ENDDO
	1240	ENDIF
[151]	1241
	1242	!
[767]	1243	!-- Use these mean profiles at the inflow (provided that Dirichlet
	1244	!-- conditions are used)
	1245	IF ( inflow_l ) THEN
	1246	DO j = nysg, nyng
	1247	DO k = nzb, nzt+1
	1248	u(k,j,nxlg:-1) = mean_inflow_profiles(k,1)
	1249	v(k,j,nxlg:-1) = mean_inflow_profiles(k,2)
[1340]	1250	w(k,j,nxlg:-1) = 0.0_wp
[767]	1251	pt(k,j,nxlg:-1) = mean_inflow_profiles(k,4)
	1252	e(k,j,nxlg:-1) = mean_inflow_profiles(k,5)
	1253	ENDDO
	1254	ENDDO
	1255	ENDIF
	1256
[151]	1257	!
[767]	1258	!-- Calculate the damping factors to be used at the inflow. For a
	1259	!-- turbulent inflow the turbulent fluctuations have to be limited
	1260	!-- vertically because otherwise the turbulent inflow layer will grow
	1261	!-- in time.
[1340]	1262	IF ( inflow_damping_height == 9999999.9_wp ) THEN
[767]	1263	!
	1264	!-- Default: use the inversion height calculated by the prerun; if
	1265	!-- this is zero, inflow_damping_height must be explicitly
	1266	!-- specified.
[1340]	1267	IF ( hom_sum(nzb+6,pr_palm,0) /= 0.0_wp ) THEN
[767]	1268	inflow_damping_height = hom_sum(nzb+6,pr_palm,0)
	1269	ELSE
	1270	WRITE( message_string, * ) 'inflow_damping_height must be ',&
	1271	'explicitly specified because&the inversion height ', &
	1272	'calculated by the prerun is zero.'
	1273	CALL message( 'init_3d_model', 'PA0318', 1, 2, 0, 6, 0 )
[292]	1274	ENDIF
[151]	1275
[767]	1276	ENDIF
	1277
[1340]	1278	IF ( inflow_damping_width == 9999999.9_wp ) THEN
[151]	1279	!
[767]	1280	!-- Default for the transition range: one tenth of the undamped
	1281	!-- layer
[1340]	1282	inflow_damping_width = 0.1_wp * inflow_damping_height
[151]	1283
[767]	1284	ENDIF
[151]	1285
[767]	1286	ALLOCATE( inflow_damping_factor(nzb:nzt+1) )
[151]	1287
[767]	1288	DO k = nzb, nzt+1
[151]	1289
[767]	1290	IF ( zu(k) <= inflow_damping_height ) THEN
[1340]	1291	inflow_damping_factor(k) = 1.0_wp
[996]	1292	ELSEIF ( zu(k) <= ( inflow_damping_height + inflow_damping_width ) ) THEN
[1340]	1293	inflow_damping_factor(k) = 1.0_wp - &
[996]	1294	( zu(k) - inflow_damping_height ) / &
	1295	inflow_damping_width
[767]	1296	ELSE
[1340]	1297	inflow_damping_factor(k) = 0.0_wp
[767]	1298	ENDIF
[151]	1299
[767]	1300	ENDDO
[151]	1301
[147]	1302	ENDIF
	1303
[152]	1304	!
[359]	1305	!-- Inside buildings set velocities and TKE back to zero
	1306	IF ( TRIM( initializing_actions ) == 'cyclic_fill' .AND. &
	1307	topography /= 'flat' ) THEN
	1308	!
	1309	!-- Inside buildings set velocities and TKE back to zero.
	1310	!-- Other scalars (pt, q, s, km, kh, p, sa, ...) are ignored at present,
	1311	!-- maybe revise later.
[1001]	1312	DO i = nxlg, nxrg
	1313	DO j = nysg, nyng
[1340]	1314	u (nzb:nzb_u_inner(j,i),j,i) = 0.0_wp
	1315	v (nzb:nzb_v_inner(j,i),j,i) = 0.0_wp
	1316	w (nzb:nzb_w_inner(j,i),j,i) = 0.0_wp
	1317	e (nzb:nzb_w_inner(j,i),j,i) = 0.0_wp
	1318	tu_m(nzb:nzb_u_inner(j,i),j,i) = 0.0_wp
	1319	tv_m(nzb:nzb_v_inner(j,i),j,i) = 0.0_wp
	1320	tw_m(nzb:nzb_w_inner(j,i),j,i) = 0.0_wp
	1321	te_m(nzb:nzb_w_inner(j,i),j,i) = 0.0_wp
	1322	tpt_m(nzb:nzb_w_inner(j,i),j,i) = 0.0_wp
[359]	1323	ENDDO
[1001]	1324	ENDDO
[359]	1325
	1326	ENDIF
	1327
	1328	!
[1]	1329	!-- Calculate initial temperature field and other constants used in case
	1330	!-- of a sloping surface
	1331	IF ( sloping_surface ) CALL init_slope
	1332
	1333	!
	1334	!-- Initialize new time levels (only done in order to set boundary values
	1335	!-- including ghost points)
	1336	e_p = e; pt_p = pt; u_p = u; v_p = v; w_p = w
[1053]	1337	IF ( humidity .OR. passive_scalar ) THEN
	1338	q_p = q
[1115]	1339	IF ( cloud_physics .AND. icloud_scheme == 0 .AND. &
	1340	precipitation ) THEN
[1053]	1341	qr_p = qr
	1342	nr_p = nr
	1343	ENDIF
	1344	ENDIF
[94]	1345	IF ( ocean ) sa_p = sa
[1]	1346
[181]	1347	!
	1348	!-- Allthough tendency arrays are set in prognostic_equations, they have
	1349	!-- have to be predefined here because they are used (but multiplied with 0)
	1350	!-- there before they are set.
[1340]	1351	te_m = 0.0_wp; tpt_m = 0.0_wp; tu_m = 0.0_wp; tv_m = 0.0_wp; tw_m = 0.0_wp
[1053]	1352	IF ( humidity .OR. passive_scalar ) THEN
[1340]	1353	tq_m = 0.0_wp
[1115]	1354	IF ( cloud_physics .AND. icloud_scheme == 0 .AND. &
	1355	precipitation ) THEN
[1340]	1356	tqr_m = 0.0_wp
	1357	tnr_m = 0.0_wp
[1053]	1358	ENDIF
	1359	ENDIF
[1340]	1360	IF ( ocean ) tsa_m = 0.0_wp
[181]	1361
[1402]	1362	CALL location_message( 'finished', .TRUE. )
[1384]	1363
[1]	1364	ELSE
	1365	!
	1366	!-- Actually this part of the programm should not be reached
[254]	1367	message_string = 'unknown initializing problem'
	1368	CALL message( 'init_3d_model', 'PA0193', 1, 2, 0, 6, 0 )
[1]	1369	ENDIF
	1370
[151]	1371
	1372	IF ( TRIM( initializing_actions ) /= 'read_restart_data' ) THEN
[1]	1373	!
[151]	1374	!-- Initialize old timelevels needed for radiation boundary conditions
	1375	IF ( outflow_l ) THEN
	1376	u_m_l(:,:,:) = u(:,:,1:2)
	1377	v_m_l(:,:,:) = v(:,:,0:1)
	1378	w_m_l(:,:,:) = w(:,:,0:1)
	1379	ENDIF
	1380	IF ( outflow_r ) THEN
	1381	u_m_r(:,:,:) = u(:,:,nx-1:nx)
	1382	v_m_r(:,:,:) = v(:,:,nx-1:nx)
	1383	w_m_r(:,:,:) = w(:,:,nx-1:nx)
	1384	ENDIF
	1385	IF ( outflow_s ) THEN
	1386	u_m_s(:,:,:) = u(:,0:1,:)
	1387	v_m_s(:,:,:) = v(:,1:2,:)
	1388	w_m_s(:,:,:) = w(:,0:1,:)
	1389	ENDIF
	1390	IF ( outflow_n ) THEN
	1391	u_m_n(:,:,:) = u(:,ny-1:ny,:)
	1392	v_m_n(:,:,:) = v(:,ny-1:ny,:)
	1393	w_m_n(:,:,:) = w(:,ny-1:ny,:)
	1394	ENDIF
[667]	1395
[151]	1396	ENDIF
[680]	1397
[667]	1398	!
	1399	!-- Calculate the initial volume flow at the right and north boundary
[709]	1400	IF ( conserve_volume_flow ) THEN
[151]	1401
[767]	1402	IF ( use_prescribed_profile_data ) THEN
[667]	1403
[1340]	1404	volume_flow_initial_l = 0.0_wp
	1405	volume_flow_area_l = 0.0_wp
[732]	1406
[667]	1407	IF ( nxr == nx ) THEN
	1408	DO j = nys, nyn
[709]	1409	DO k = nzb_2d(j,nx)+1, nzt
[667]	1410	volume_flow_initial_l(1) = volume_flow_initial_l(1) + &
[767]	1411	u_init(k) * dzw(k)
	1412	volume_flow_area_l(1) = volume_flow_area_l(1) + dzw(k)
	1413	ENDDO
	1414	ENDDO
	1415	ENDIF
	1416
	1417	IF ( nyn == ny ) THEN
	1418	DO i = nxl, nxr
	1419	DO k = nzb_2d(ny,i)+1, nzt
	1420	volume_flow_initial_l(2) = volume_flow_initial_l(2) + &
	1421	v_init(k) * dzw(k)
	1422	volume_flow_area_l(2) = volume_flow_area_l(2) + dzw(k)
	1423	ENDDO
	1424	ENDDO
	1425	ENDIF
	1426
	1427	#if defined( __parallel )
	1428	CALL MPI_ALLREDUCE( volume_flow_initial_l(1), volume_flow_initial(1),&
	1429	2, MPI_REAL, MPI_SUM, comm2d, ierr )
	1430	CALL MPI_ALLREDUCE( volume_flow_area_l(1), volume_flow_area(1), &
	1431	2, MPI_REAL, MPI_SUM, comm2d, ierr )
	1432
	1433	#else
	1434	volume_flow_initial = volume_flow_initial_l
	1435	volume_flow_area = volume_flow_area_l
	1436	#endif
	1437
	1438	ELSEIF ( TRIM( initializing_actions ) == 'cyclic_fill' ) THEN
	1439
[1340]	1440	volume_flow_initial_l = 0.0_wp
	1441	volume_flow_area_l = 0.0_wp
[767]	1442
	1443	IF ( nxr == nx ) THEN
	1444	DO j = nys, nyn
	1445	DO k = nzb_2d(j,nx)+1, nzt
	1446	volume_flow_initial_l(1) = volume_flow_initial_l(1) + &
[667]	1447	hom_sum(k,1,0) * dzw(k)
	1448	volume_flow_area_l(1) = volume_flow_area_l(1) + dzw(k)
	1449	ENDDO
	1450	ENDDO
	1451	ENDIF
	1452
	1453	IF ( nyn == ny ) THEN
	1454	DO i = nxl, nxr
[709]	1455	DO k = nzb_2d(ny,i)+1, nzt
[667]	1456	volume_flow_initial_l(2) = volume_flow_initial_l(2) + &
[709]	1457	hom_sum(k,2,0) * dzw(k)
[667]	1458	volume_flow_area_l(2) = volume_flow_area_l(2) + dzw(k)
	1459	ENDDO
	1460	ENDDO
	1461	ENDIF
	1462
[732]	1463	#if defined( __parallel )
	1464	CALL MPI_ALLREDUCE( volume_flow_initial_l(1), volume_flow_initial(1),&
	1465	2, MPI_REAL, MPI_SUM, comm2d, ierr )
	1466	CALL MPI_ALLREDUCE( volume_flow_area_l(1), volume_flow_area(1), &
	1467	2, MPI_REAL, MPI_SUM, comm2d, ierr )
	1468
	1469	#else
	1470	volume_flow_initial = volume_flow_initial_l
	1471	volume_flow_area = volume_flow_area_l
	1472	#endif
	1473
[667]	1474	ELSEIF ( TRIM( initializing_actions ) /= 'read_restart_data' ) THEN
	1475
[1340]	1476	volume_flow_initial_l = 0.0_wp
	1477	volume_flow_area_l = 0.0_wp
[732]	1478
[667]	1479	IF ( nxr == nx ) THEN
	1480	DO j = nys, nyn
[709]	1481	DO k = nzb_2d(j,nx)+1, nzt
[667]	1482	volume_flow_initial_l(1) = volume_flow_initial_l(1) + &
[709]	1483	u(k,j,nx) * dzw(k)
[667]	1484	volume_flow_area_l(1) = volume_flow_area_l(1) + dzw(k)
	1485	ENDDO
	1486	ENDDO
	1487	ENDIF
	1488
	1489	IF ( nyn == ny ) THEN
	1490	DO i = nxl, nxr
[709]	1491	DO k = nzb_2d(ny,i)+1, nzt
[667]	1492	volume_flow_initial_l(2) = volume_flow_initial_l(2) + &
	1493	v(k,ny,i) * dzw(k)
	1494	volume_flow_area_l(2) = volume_flow_area_l(2) + dzw(k)
	1495	ENDDO
	1496	ENDDO
	1497	ENDIF
	1498
	1499	#if defined( __parallel )
[732]	1500	CALL MPI_ALLREDUCE( volume_flow_initial_l(1), volume_flow_initial(1),&
	1501	2, MPI_REAL, MPI_SUM, comm2d, ierr )
	1502	CALL MPI_ALLREDUCE( volume_flow_area_l(1), volume_flow_area(1), &
	1503	2, MPI_REAL, MPI_SUM, comm2d, ierr )
[667]	1504
	1505	#else
[732]	1506	volume_flow_initial = volume_flow_initial_l
	1507	volume_flow_area = volume_flow_area_l
[667]	1508	#endif
	1509
[732]	1510	ENDIF
	1511
[151]	1512	!
[709]	1513	!-- In case of 'bulk_velocity' mode, volume_flow_initial is calculated
	1514	!-- from u\|v_bulk instead
[680]	1515	IF ( TRIM( conserve_volume_flow_mode ) == 'bulk_velocity' ) THEN
	1516	volume_flow_initial(1) = u_bulk * volume_flow_area(1)
	1517	volume_flow_initial(2) = v_bulk * volume_flow_area(2)
	1518	ENDIF
[667]	1519
[680]	1520	ENDIF
	1521
[787]	1522	!
	1523	!-- Initialize quantities for special advections schemes
	1524	CALL init_advec
[680]	1525
[667]	1526	!
[680]	1527	!-- Impose random perturbation on the horizontal velocity field and then
	1528	!-- remove the divergences from the velocity field at the initial stage
	1529	IF ( create_disturbances .AND. &
	1530	TRIM( initializing_actions ) /= 'read_restart_data' .AND. &
	1531	TRIM( initializing_actions ) /= 'cyclic_fill' ) THEN
	1532
[1402]	1533	CALL location_message( 'creating initial disturbances', .FALSE. )
[680]	1534	CALL disturb_field( nzb_u_inner, tend, u )
	1535	CALL disturb_field( nzb_v_inner, tend, v )
[1402]	1536	CALL location_message( 'finished', .TRUE. )
[1384]	1537
[1402]	1538	CALL location_message( 'calling pressure solver', .FALSE. )
[680]	1539	n_sor = nsor_ini
[1221]	1540	!$acc data copyin( d, ddzu, ddzw, nzb_s_inner, nzb_u_inner ) &
	1541	!$acc copyin( nzb_v_inner, nzb_w_inner, p, rflags_s_inner, tend ) &
	1542	!$acc copyin( weight_pres, weight_substep ) &
	1543	!$acc copy( tri, tric, u, v, w )
[680]	1544	CALL pres
[1111]	1545	!$acc end data
[680]	1546	n_sor = nsor
[1402]	1547	CALL location_message( 'finished', .TRUE. )
[1384]	1548
[680]	1549	ENDIF
	1550
	1551	!
[138]	1552	!-- Initialization of the leaf area density
[709]	1553	IF ( plant_canopy ) THEN
[138]	1554
	1555	SELECT CASE ( TRIM( canopy_mode ) )
	1556
	1557	CASE( 'block' )
	1558
[667]	1559	DO i = nxlg, nxrg
	1560	DO j = nysg, nyng
[138]	1561	lad_s(:,j,i) = lad(:)
	1562	cdc(:,j,i) = drag_coefficient
[709]	1563	IF ( passive_scalar ) THEN
[153]	1564	sls(:,j,i) = leaf_surface_concentration
	1565	sec(:,j,i) = scalar_exchange_coefficient
	1566	ENDIF
[138]	1567	ENDDO
	1568	ENDDO
	1569
	1570	CASE DEFAULT
	1571
	1572	!
	1573	!-- The DEFAULT case is reached either if the parameter
	1574	!-- canopy mode contains a wrong character string or if the
	1575	!-- user has coded a special case in the user interface.
	1576	!-- There, the subroutine user_init_plant_canopy checks
	1577	!-- which of these two conditions applies.
	1578	CALL user_init_plant_canopy
	1579
	1580	END SELECT
	1581
[667]	1582	CALL exchange_horiz( lad_s, nbgp )
	1583	CALL exchange_horiz( cdc, nbgp )
[138]	1584
[709]	1585	IF ( passive_scalar ) THEN
[667]	1586	CALL exchange_horiz( sls, nbgp )
	1587	CALL exchange_horiz( sec, nbgp )
[153]	1588	ENDIF
	1589
	1590	!
	1591	!-- Sharp boundaries of the plant canopy in horizontal directions
	1592	!-- In vertical direction the interpolation is retained, as the leaf
	1593	!-- area density is initialised by prescribing a vertical profile
	1594	!-- consisting of piecewise linear segments. The upper boundary
	1595	!-- of the plant canopy is now defined by lad_w(pch_index,:,:) = 0.0.
	1596
[138]	1597	DO i = nxl, nxr
	1598	DO j = nys, nyn
	1599	DO k = nzb, nzt+1
[1340]	1600	IF ( lad_s(k,j,i) > 0.0_wp ) THEN
[153]	1601	lad_u(k,j,i) = lad_s(k,j,i)
	1602	lad_u(k,j,i+1) = lad_s(k,j,i)
	1603	lad_v(k,j,i) = lad_s(k,j,i)
	1604	lad_v(k,j+1,i) = lad_s(k,j,i)
	1605	ENDIF
[138]	1606	ENDDO
	1607	DO k = nzb, nzt
[1340]	1608	lad_w(k,j,i) = 0.5_wp * ( lad_s(k+1,j,i) + lad_s(k,j,i) )
[138]	1609	ENDDO
	1610	ENDDO
	1611	ENDDO
	1612
[1340]	1613	lad_w(pch_index,:,:) = 0.0_wp
[153]	1614	lad_w(nzt+1,:,:) = lad_w(nzt,:,:)
[138]	1615
[667]	1616	CALL exchange_horiz( lad_u, nbgp )
	1617	CALL exchange_horiz( lad_v, nbgp )
	1618	CALL exchange_horiz( lad_w, nbgp )
[153]	1619
	1620	!
	1621	!-- Initialisation of the canopy heat source distribution
[1340]	1622	IF ( cthf /= 0.0_wp ) THEN
[153]	1623	!
	1624	!-- Piecewise evaluation of the leaf area index by
	1625	!-- integration of the leaf area density
[1340]	1626	lai(:,:,:) = 0.0_wp
[667]	1627	DO i = nxlg, nxrg
	1628	DO j = nysg, nyng
[153]	1629	DO k = pch_index-1, 0, -1
	1630	lai(k,j,i) = lai(k+1,j,i) + &
[1340]	1631	( 0.5_wp * ( lad_w(k+1,j,i) + &
[153]	1632	lad_s(k+1,j,i) ) * &
	1633	( zw(k+1) - zu(k+1) ) ) + &
[1340]	1634	( 0.5_wp * ( lad_w(k,j,i) + &
[153]	1635	lad_s(k+1,j,i) ) * &
	1636	( zu(k+1) - zw(k) ) )
	1637	ENDDO
	1638	ENDDO
	1639	ENDDO
	1640
	1641	!
	1642	!-- Evaluation of the upward kinematic vertical heat flux within the
	1643	!-- canopy
[667]	1644	DO i = nxlg, nxrg
	1645	DO j = nysg, nyng
[153]	1646	DO k = 0, pch_index
	1647	canopy_heat_flux(k,j,i) = cthf * &
[1340]	1648	exp( -0.6_wp * lai(k,j,i) )
[153]	1649	ENDDO
	1650	ENDDO
	1651	ENDDO
	1652
	1653	!
	1654	!-- The near surface heat flux is derived from the heat flux
	1655	!-- distribution within the canopy
	1656	shf(:,:) = canopy_heat_flux(0,:,:)
	1657
	1658	ENDIF
	1659
[138]	1660	ENDIF
	1661
	1662	!
[1]	1663	!-- If required, initialize dvrp-software
[1340]	1664	IF ( dt_dvrp /= 9999999.9_wp ) CALL init_dvrp
[1]	1665
[96]	1666	IF ( ocean ) THEN
[1]	1667	!
[96]	1668	!-- Initialize quantities needed for the ocean model
	1669	CALL init_ocean
[388]	1670
[96]	1671	ELSE
	1672	!
	1673	!-- Initialize quantities for handling cloud physics
[849]	1674	!-- This routine must be called before lpm_init, because
[96]	1675	!-- otherwise, array pt_d_t, needed in data_output_dvrp (called by
[849]	1676	!-- lpm_init) is not defined.
[96]	1677	CALL init_cloud_physics
	1678	ENDIF
[1]	1679
	1680	!
	1681	!-- If required, initialize particles
[849]	1682	IF ( particle_advection ) CALL lpm_init
[1]	1683
	1684	!
[673]	1685	!-- Initialize the ws-scheme.
	1686	IF ( ws_scheme_sca .OR. ws_scheme_mom ) CALL ws_init
[1]	1687
	1688	!
[709]	1689	!-- Setting weighting factors for calculation of perturbation pressure
	1690	!-- and turbulent quantities from the RK substeps
	1691	IF ( TRIM(timestep_scheme) == 'runge-kutta-3' ) THEN ! for RK3-method
	1692
[1322]	1693	weight_substep(1) = 1._wp/6._wp
	1694	weight_substep(2) = 3._wp/10._wp
	1695	weight_substep(3) = 8._wp/15._wp
[709]	1696
[1322]	1697	weight_pres(1) = 1._wp/3._wp
	1698	weight_pres(2) = 5._wp/12._wp
	1699	weight_pres(3) = 1._wp/4._wp
[709]	1700
	1701	ELSEIF ( TRIM(timestep_scheme) == 'runge-kutta-2' ) THEN ! for RK2-method
	1702
[1322]	1703	weight_substep(1) = 1._wp/2._wp
	1704	weight_substep(2) = 1._wp/2._wp
[673]	1705
[1322]	1706	weight_pres(1) = 1._wp/2._wp
	1707	weight_pres(2) = 1._wp/2._wp
[709]	1708
[1001]	1709	ELSE ! for Euler-method
[709]	1710
[1340]	1711	weight_substep(1) = 1.0_wp
	1712	weight_pres(1) = 1.0_wp
[709]	1713
[673]	1714	ENDIF
	1715
	1716	!
[1]	1717	!-- Initialize Rayleigh damping factors
[1340]	1718	rdf = 0.0_wp
	1719	rdf_sc = 0.0_wp
	1720	IF ( rayleigh_damping_factor /= 0.0_wp ) THEN
[108]	1721	IF ( .NOT. ocean ) THEN
	1722	DO k = nzb+1, nzt
	1723	IF ( zu(k) >= rayleigh_damping_height ) THEN
	1724	rdf(k) = rayleigh_damping_factor * &
[1340]	1725	( SIN( pi * 0.5_wp * ( zu(k) - rayleigh_damping_height ) &
	1726	/ ( zu(nzt) - rayleigh_damping_height ) )&
[1]	1727	)**2
[108]	1728	ENDIF
	1729	ENDDO
	1730	ELSE
	1731	DO k = nzt, nzb+1, -1
	1732	IF ( zu(k) <= rayleigh_damping_height ) THEN
	1733	rdf(k) = rayleigh_damping_factor * &
[1340]	1734	( SIN( pi * 0.5_wp * ( rayleigh_damping_height - zu(k) ) &
	1735	/ ( rayleigh_damping_height - zu(nzb+1)))&
[108]	1736	)**2
	1737	ENDIF
	1738	ENDDO
	1739	ENDIF
[1]	1740	ENDIF
[785]	1741	IF ( scalar_rayleigh_damping ) rdf_sc = rdf
[1]	1742
	1743	!
[240]	1744	!-- Initialize the starting level and the vertical smoothing factor used for
	1745	!-- the external pressure gradient
[1340]	1746	dp_smooth_factor = 1.0_wp
[240]	1747	IF ( dp_external ) THEN
	1748	!
	1749	!-- Set the starting level dp_level_ind_b only if it has not been set before
	1750	!-- (e.g. in init_grid).
	1751	IF ( dp_level_ind_b == 0 ) THEN
	1752	ind_array = MINLOC( ABS( dp_level_b - zu ) )
	1753	dp_level_ind_b = ind_array(1) - 1 + nzb
	1754	! MINLOC uses lower array bound 1
	1755	ENDIF
	1756	IF ( dp_smooth ) THEN
[1340]	1757	dp_smooth_factor(:dp_level_ind_b) = 0.0_wp
[240]	1758	DO k = dp_level_ind_b+1, nzt
[1340]	1759	dp_smooth_factor(k) = 0.5_wp * ( 1.0_wp + SIN( pi * &
	1760	( REAL( k - dp_level_ind_b, KIND=wp ) / &
	1761	REAL( nzt - dp_level_ind_b, KIND=wp ) - 0.5_wp ) ) )
[240]	1762	ENDDO
	1763	ENDIF
	1764	ENDIF
	1765
	1766	!
[978]	1767	!-- Initialize damping zone for the potential temperature in case of
	1768	!-- non-cyclic lateral boundaries. The damping zone has the maximum value
	1769	!-- at the inflow boundary and decreases to zero at pt_damping_width.
[1340]	1770	ptdf_x = 0.0_wp
	1771	ptdf_y = 0.0_wp
[1159]	1772	IF ( bc_lr_dirrad ) THEN
[996]	1773	DO i = nxl, nxr
[978]	1774	IF ( ( i * dx ) < pt_damping_width ) THEN
[1340]	1775	ptdf_x(i) = pt_damping_factor * ( SIN( pi * 0.5_wp * &
	1776	REAL( pt_damping_width - i * dx, KIND=wp ) / ( &
	1777	REAL( pt_damping_width, KIND=wp ) ) ) )**2
[73]	1778	ENDIF
	1779	ENDDO
[1159]	1780	ELSEIF ( bc_lr_raddir ) THEN
[996]	1781	DO i = nxl, nxr
[978]	1782	IF ( ( i * dx ) > ( nx * dx - pt_damping_width ) ) THEN
[1322]	1783	ptdf_x(i) = pt_damping_factor * &
[1340]	1784	SIN( pi * 0.5_wp * &
	1785	( ( i - nx ) * dx + pt_damping_width ) / &
	1786	REAL( pt_damping_width, KIND=wp ) )**2
[73]	1787	ENDIF
[978]	1788	ENDDO
[1159]	1789	ELSEIF ( bc_ns_dirrad ) THEN
[996]	1790	DO j = nys, nyn
[978]	1791	IF ( ( j * dy ) > ( ny * dy - pt_damping_width ) ) THEN
[1322]	1792	ptdf_y(j) = pt_damping_factor * &
[1340]	1793	SIN( pi * 0.5_wp * &
	1794	( ( j - ny ) * dy + pt_damping_width ) / &
	1795	REAL( pt_damping_width, KIND=wp ) )**2
[1]	1796	ENDIF
[978]	1797	ENDDO
[1159]	1798	ELSEIF ( bc_ns_raddir ) THEN
[996]	1799	DO j = nys, nyn
[978]	1800	IF ( ( j * dy ) < pt_damping_width ) THEN
[1322]	1801	ptdf_y(j) = pt_damping_factor * &
[1340]	1802	SIN( pi * 0.5_wp * &
	1803	( pt_damping_width - j * dy ) / &
	1804	REAL( pt_damping_width, KIND=wp ) )**2
[1]	1805	ENDIF
[73]	1806	ENDDO
[1]	1807	ENDIF
	1808
	1809	!
[709]	1810	!-- Initialize local summation arrays for routine flow_statistics.
	1811	!-- This is necessary because they may not yet have been initialized when they
	1812	!-- are called from flow_statistics (or - depending on the chosen model run -
	1813	!-- are never initialized)
[1340]	1814	sums_divnew_l = 0.0_wp
	1815	sums_divold_l = 0.0_wp
	1816	sums_l_l = 0.0_wp
	1817	sums_up_fraction_l = 0.0_wp
	1818	sums_wsts_bc_l = 0.0_wp
[1]	1819
	1820	!
	1821	!-- Pre-set masks for regional statistics. Default is the total model domain.
[1015]	1822	!-- Ghost points are excluded because counting values at the ghost boundaries
	1823	!-- would bias the statistics
[1340]	1824	rmask = 1.0_wp
	1825	rmask(:,nxlg:nxl-1,:) = 0.0_wp; rmask(:,nxr+1:nxrg,:) = 0.0_wp
	1826	rmask(nysg:nys-1,:,:) = 0.0_wp; rmask(nyn+1:nyng,:,:) = 0.0_wp
[1]	1827
	1828	!
[51]	1829	!-- User-defined initializing actions. Check afterwards, if maximum number
[709]	1830	!-- of allowed timeseries is exceeded
[1]	1831	CALL user_init
	1832
[51]	1833	IF ( dots_num > dots_max ) THEN
[254]	1834	WRITE( message_string, * ) 'number of time series quantities exceeds', &
[274]	1835	' its maximum of dots_max = ', dots_max, &
[254]	1836	' &Please increase dots_max in modules.f90.'
	1837	CALL message( 'init_3d_model', 'PA0194', 1, 2, 0, 6, 0 )
[51]	1838	ENDIF
	1839
[1]	1840	!
	1841	!-- Input binary data file is not needed anymore. This line must be placed
	1842	!-- after call of user_init!
	1843	CALL close_file( 13 )
	1844
	1845	!
	1846	!-- Compute total sum of active mask grid points
	1847	!-- ngp_2dh: number of grid points of a horizontal cross section through the
	1848	!-- total domain
	1849	!-- ngp_3d: number of grid points of the total domain
[132]	1850	ngp_2dh_outer_l = 0
	1851	ngp_2dh_outer = 0
	1852	ngp_2dh_s_inner_l = 0
	1853	ngp_2dh_s_inner = 0
	1854	ngp_2dh_l = 0
	1855	ngp_2dh = 0
[1340]	1856	ngp_3d_inner_l = 0.0_wp
[132]	1857	ngp_3d_inner = 0
	1858	ngp_3d = 0
	1859	ngp_sums = ( nz + 2 ) * ( pr_palm + max_pr_user )
[1]	1860
	1861	DO sr = 0, statistic_regions
	1862	DO i = nxl, nxr
	1863	DO j = nys, nyn
[1340]	1864	IF ( rmask(j,i,sr) == 1.0_wp ) THEN
[1]	1865	!
	1866	!-- All xy-grid points
	1867	ngp_2dh_l(sr) = ngp_2dh_l(sr) + 1
	1868	!
	1869	!-- xy-grid points above topography
	1870	DO k = nzb_s_outer(j,i), nz + 1
	1871	ngp_2dh_outer_l(k,sr) = ngp_2dh_outer_l(k,sr) + 1
	1872	ENDDO
[132]	1873	DO k = nzb_s_inner(j,i), nz + 1
	1874	ngp_2dh_s_inner_l(k,sr) = ngp_2dh_s_inner_l(k,sr) + 1
	1875	ENDDO
[1]	1876	!
	1877	!-- All grid points of the total domain above topography
	1878	ngp_3d_inner_l(sr) = ngp_3d_inner_l(sr) + &
	1879	( nz - nzb_s_inner(j,i) + 2 )
	1880	ENDIF
	1881	ENDDO
	1882	ENDDO
	1883	ENDDO
	1884
	1885	sr = statistic_regions + 1
	1886	#if defined( __parallel )
[622]	1887	IF ( collective_wait ) CALL MPI_BARRIER( comm2d, ierr )
[485]	1888	CALL MPI_ALLREDUCE( ngp_2dh_l(0), ngp_2dh(0), sr, MPI_INTEGER, MPI_SUM, &
[1]	1889	comm2d, ierr )
[622]	1890	IF ( collective_wait ) CALL MPI_BARRIER( comm2d, ierr )
[485]	1891	CALL MPI_ALLREDUCE( ngp_2dh_outer_l(0,0), ngp_2dh_outer(0,0), (nz+2)*sr, &
[1]	1892	MPI_INTEGER, MPI_SUM, comm2d, ierr )
[622]	1893	IF ( collective_wait ) CALL MPI_BARRIER( comm2d, ierr )
[485]	1894	CALL MPI_ALLREDUCE( ngp_2dh_s_inner_l(0,0), ngp_2dh_s_inner(0,0), &
[132]	1895	(nz+2)*sr, MPI_INTEGER, MPI_SUM, comm2d, ierr )
[622]	1896	IF ( collective_wait ) CALL MPI_BARRIER( comm2d, ierr )
[485]	1897	CALL MPI_ALLREDUCE( ngp_3d_inner_l(0), ngp_3d_inner_tmp(0), sr, MPI_REAL, &
[1]	1898	MPI_SUM, comm2d, ierr )
[485]	1899	ngp_3d_inner = INT( ngp_3d_inner_tmp, KIND = SELECTED_INT_KIND( 18 ) )
[1]	1900	#else
[132]	1901	ngp_2dh = ngp_2dh_l
	1902	ngp_2dh_outer = ngp_2dh_outer_l
	1903	ngp_2dh_s_inner = ngp_2dh_s_inner_l
[485]	1904	ngp_3d_inner = INT( ngp_3d_inner_l, KIND = SELECTED_INT_KIND( 18 ) )
[1]	1905	#endif
	1906
[560]	1907	ngp_3d = INT ( ngp_2dh, KIND = SELECTED_INT_KIND( 18 ) ) * &
	1908	INT ( (nz + 2 ), KIND = SELECTED_INT_KIND( 18 ) )
[1]	1909
	1910	!
	1911	!-- Set a lower limit of 1 in order to avoid zero divisions in flow_statistics,
	1912	!-- buoyancy, etc. A zero value will occur for cases where all grid points of
	1913	!-- the respective subdomain lie below the surface topography
[667]	1914	ngp_2dh_outer = MAX( 1, ngp_2dh_outer(:,:) )
[631]	1915	ngp_3d_inner = MAX( INT(1, KIND = SELECTED_INT_KIND( 18 )), &
	1916	ngp_3d_inner(:) )
[667]	1917	ngp_2dh_s_inner = MAX( 1, ngp_2dh_s_inner(:,:) )
[1]	1918
[485]	1919	DEALLOCATE( ngp_2dh_l, ngp_2dh_outer_l, ngp_3d_inner_l, ngp_3d_inner_tmp )
[1]	1920
[1402]	1921	CALL location_message( 'leaving init_3d_model', .TRUE. )
[1]	1922
	1923	END SUBROUTINE init_3d_model

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

| Impressum | ©Leibniz Universität Hannover |