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data_output_ptseries.f90 @ 161

Last change on this file since 161 was 77, checked in by raasch, 18 years ago

New:
---

particle reflection from vertical walls implemented, particle SGS model adjusted to walls

Wall functions for vertical walls now include diabatic conditions. New subroutines wall_fluxes, wall_fluxes_e. New 4D-array rif_wall.

new d3par-parameter netcdf_64bit_3d to switch on 64bit offset only for 3D files

new d3par-parameter dt_max to define the maximum value for the allowed timestep

new inipar-parameter loop_optimization to control the loop optimization method

new inipar-parameter pt_refrence. If given, this value is used as the reference that in buoyancy terms (otherwise, the instantaneous horizontally averaged temperature is used).

new user interface user_advec_particles

new initializing action "by_user" calls user_init_3d_model and allows the initial setting of all 3d arrays

topography height informations are stored on arrays zu_s_inner and zw_w_inner and output to the 2d/3d NetCDF files

samples added to the user interface which show how to add user-define time series quantities.

calculation/output of precipitation amount, precipitation rate and z0 (by setting "pra*", "prr*", "z0*" with data_output). The time interval on which the precipitation amount is defined is set by new d3par-parameter precipitation_amount_interval

unit 9 opened for debug output (file DEBUG_<pe#>)

Makefile, advec_particles, average_3d_data, buoyancy, calc_precipitation, check_open, check_parameters, data_output_2d, diffusion_e, diffusion_u, diffusion_v, diffusion_w, diffusivities, header, impact_of_latent_heat, init_particles, init_3d_model, modules, netcdf, parin, production_e, read_var_list, read_3d_binary, sum_up_3d_data, user_interface, write_var_list, write_3d_binary

New: wall_fluxes

Changed:

General revision of non-cyclic horizontal boundary conditions: radiation boundary conditions are now used instead of Neumann conditions at the outflow (calculation needs velocity values for t-dt, which are stored on new arrays u_m_l, u_m_r, etc.), calculation of mean outflow is not needed any more, volume flow control is added for the outflow boundary (currently only for the north boundary!!), additional gridpoints along x and y (uxrp, vynp) are not needed any more, routine "boundary_conds" now operates on timelevel t+dt and is not split in two parts (main, uvw_outflow) any more, Neumann boundary conditions at inflow/outflow in case of non-cyclic boundary conditions for all 2d-arrays that are handled by exchange_horiz_2d

The FFT-method for solving the Poisson-equation is now working with Neumann boundary conditions both at the bottom and the top. This requires adjustments of the tridiagonal coefficients and subtracting the horizontally averaged mean from the vertical velocity field.

+age_m in particle_type

Particles-package is now part of the default code ("-p particles" is not needed any more).

Move call of user_actions( 'after_integration' ) below increment of times
and counters. user_actions is now called for each statistic region and has as an argument the number of the respective region (sr)

d3par-parameter data_output_ts removed. Timeseries output for "profil" removed. Timeseries are now switched on by dt_dots. Timeseries data is collected in flow_statistics.

Initial velocities at nzb+1 are regarded for volume flow control in case they have been set zero before (to avoid small timesteps); see new internal parameters u/v_nzb_p1_for_vfc.

q is not allowed to become negative (prognostic_equations).

poisfft_init is only called if fft-solver is switched on (init_pegrid).

d3par-parameter moisture renamed to humidity.

Subversion global revision number is read from mrun and added to the run description header and to the run control (_rc) file.

vtk directives removed from main program.

The uitility routine interpret_config reads PALM environment variables from NAMELIST instead using the system call GETENV.

advec_u_pw, advec_u_up, advec_v_pw, advec_v_up, asselin_filter, check_parameters, coriolis, data_output_dvrp, data_output_ptseries, data_output_ts, data_output_2d, data_output_3d, diffusion_u, diffusion_v, exchange_horiz, exchange_horiz_2d, flow_statistics, header, init_grid, init_particles, init_pegrid, init_rankine, init_pt_anomaly, init_1d_model, init_3d_model, modules, palm, package_parin, parin, poisfft, poismg, prandtl_fluxes, pres, production_e, prognostic_equations, read_var_list, read_3d_binary, sor, swap_timelevel, time_integration, write_var_list, write_3d_binary

Errors:

Bugfix: preset of tendencies te_em, te_um, te_vm in init_1d_model

Bugfix in sample for reading user defined data from restart file (user_init)

Bugfix in setting diffusivities for cases with the outflow damping layer extending over more than one subdomain (init_3d_model)

Check for possible negative humidities in the initial humidity profile.

in Makefile, default suffixes removed from the suffix list to avoid calling of m2c in
# case of .mod files

Makefile
check_parameters, init_1d_model, init_3d_model, user_interface

Property svn:keywords set to Id

File size: 10.8 KB

Line
1	SUBROUTINE data_output_ptseries
2
3	!------------------------------------------------------------------------------!
4	! Actual revisions:
5	! -----------------
6	!
7	!
8	! Former revisions:
9	! -----------------
10	! $Id: data_output_ptseries.f90 77 2007-03-29 04:26:56Z letzel $
11	!
12	! 60 2007-03-11 11:50:04Z raasch
13	! Particles-package is now part of the default code.
14	!
15	! RCS Log replace by Id keyword, revision history cleaned up
16	!
17	! Revision 1.2 2006/08/22 13:51:13 raasch
18	! Seperate output for particle groups
19	!
20	! Revision 1.1 2006/08/04 14:24:18 raasch
21	! Initial revision
22	!
23	!
24	! Description:
25	! ------------
26	! Output of particle data timeseries in NetCDF format.
27	!------------------------------------------------------------------------------!
28
29	USE control_parameters
30	USE cpulog
31	USE indices
32	USE interfaces
33	USE netcdf_control
34	USE particle_attributes
35	USE pegrid
36
37	IMPLICIT NONE
38
39
40	INTEGER :: i, inum, j, n
41
42	REAL, DIMENSION(0:number_of_particle_groups,30) :: pts_value, pts_value_l
43
44
45
46	CALL cpu_log( log_point(36), 'data_output_ptseries', 'start' )
47
48	IF ( myid == 0 .AND. netcdf_output ) THEN
49	!
50	!-- Open file for time series output in NetCDF format
51	dopts_time_count = dopts_time_count + 1
52	CALL check_open( 109 )
53	#if defined( __netcdf )
54	!
55	!-- Update the particle time series time axis
56	nc_stat = NF90_PUT_VAR( id_set_pts, id_var_time_pts, &
57	(/ simulated_time /), &
58	start = (/ dopts_time_count /), count = (/ 1 /) )
59	IF (nc_stat /= NF90_NOERR) CALL handle_netcdf_error( 391 )
60	#endif
61
62	ENDIF
63
64	pts_value_l = 0.0
65
66	!
67	!-- Calculate or collect the particle time series quantities for all particles
68	!-- and seperately for each particle group (if there is more than one group)
69	DO n = 1, number_of_particles
70
71	pts_value_l(0,1) = number_of_particles ! total # of particles
72	pts_value_l(0,2) = pts_value_l(0,2) + &
73	( particles(n)%x - particles(n)%origin_x ) ! mean x
74	pts_value_l(0,3) = pts_value_l(0,3) + &
75	( particles(n)%y - particles(n)%origin_y ) ! mean y
76	pts_value_l(0,4) = pts_value_l(0,4) + &
77	( particles(n)%z - particles(n)%origin_z ) ! mean z
78	pts_value_l(0,5) = pts_value_l(0,5) + particles(n)%z ! mean z (absolute)
79	pts_value_l(0,6) = pts_value_l(0,6) + particles(n)%speed_x ! mean u
80	pts_value_l(0,7) = pts_value_l(0,7) + particles(n)%speed_y ! mean v
81	pts_value_l(0,8) = pts_value_l(0,8) + particles(n)%speed_z ! mean w
82	pts_value_l(0,9) = pts_value_l(0,9) + &
83	particles(n)%speed_x_sgs ! mean sgsu
84	pts_value_l(0,10) = pts_value_l(0,10) + &
85	particles(n)%speed_y_sgs ! mean sgsv
86	pts_value_l(0,11) = pts_value_l(0,11) + &
87	particles(n)%speed_z_sgs ! mean sgsw
88	IF ( particles(n)%speed_z > 0.0 ) THEN
89	pts_value_l(0,12) = pts_value_l(0,12) + 1.0 ! # of upward moving prts
90	pts_value_l(0,13) = pts_value_l(0,13) + &
91	particles(n)%speed_z ! mean w upw.
92	ELSE
93	pts_value_l(0,14) = pts_value_l(0,14) + &
94	particles(n)%speed_z ! mean w down
95	ENDIF
96	pts_value_l(0,15) = number_of_particles
97	pts_value_l(0,16) = number_of_particles
98
99	!
100	!-- Repeat the same for the respective particle group
101	IF ( number_of_particle_groups > 1 ) THEN
102	j = particles(n)%group
103
104	pts_value_l(j,1) = pts_value_l(j,1) + 1
105	pts_value_l(j,2) = pts_value_l(j,2) + &
106	( particles(n)%x - particles(n)%origin_x )
107	pts_value_l(j,3) = pts_value_l(j,3) + &
108	( particles(n)%y - particles(n)%origin_y )
109	pts_value_l(j,4) = pts_value_l(j,4) + &
110	( particles(n)%z - particles(n)%origin_z )
111	pts_value_l(j,5) = pts_value_l(j,5) + particles(n)%z
112	pts_value_l(j,6) = pts_value_l(j,6) + particles(n)%speed_x
113	pts_value_l(j,7) = pts_value_l(j,7) + particles(n)%speed_y
114	pts_value_l(j,8) = pts_value_l(j,8) + particles(n)%speed_z
115	pts_value_l(j,9) = pts_value_l(j,9) + particles(n)%speed_x_sgs
116	pts_value_l(j,10) = pts_value_l(j,10) + particles(n)%speed_y_sgs
117	pts_value_l(j,11) = pts_value_l(j,11) + particles(n)%speed_z_sgs
118	IF ( particles(n)%speed_z > 0.0 ) THEN
119	pts_value_l(j,12) = pts_value_l(j,12) + 1.0
120	pts_value_l(j,13) = pts_value_l(j,13) + particles(n)%speed_z
121	ELSE
122	pts_value_l(j,14) = pts_value_l(j,14) + particles(n)%speed_z
123	ENDIF
124	pts_value_l(j,15) = pts_value_l(j,15) + 1.0
125	pts_value_l(j,16) = pts_value_l(j,16) + 1.0
126
127	ENDIF
128
129	ENDDO
130
131	#if defined( __parallel )
132	!
133	!-- Sum values of the subdomains
134	inum = number_of_particle_groups + 1
135
136	CALL MPI_ALLREDUCE( pts_value_l(0,1), pts_value(0,1), 14*inum, MPI_REAL, &
137	MPI_SUM, comm2d, ierr )
138	CALL MPI_ALLREDUCE( pts_value_l(0,15), pts_value(0,15), inum, MPI_REAL, &
139	MPI_MAX, comm2d, ierr )
140	CALL MPI_ALLREDUCE( pts_value_l(0,16), pts_value(0,16), inum, MPI_REAL, &
141	MPI_MIN, comm2d, ierr )
142	#else
143	pts_value(:,1:16) = pts_value_l(:,1:16)
144	#endif
145
146	!
147	!-- Normalize the above calculated quantities with the total number of
148	!-- particles
149	IF ( number_of_particle_groups > 1 ) THEN
150	inum = number_of_particle_groups
151	ELSE
152	inum = 0
153	ENDIF
154
155	DO j = 0, inum
156
157	IF ( pts_value(j,1) > 0.0 ) THEN
158
159	pts_value(j,2:14) = pts_value(j,2:14) / pts_value(j,1)
160	IF ( pts_value(j,12) > 0.0 .AND. pts_value(j,12) < 1.0 ) THEN
161	pts_value(j,13) = pts_value(j,13) / pts_value(j,12)
162	pts_value(j,14) = pts_value(j,14) / ( 1.0 - pts_value(j,12) )
163	ELSEIF ( pts_value(j,12) == 0.0 ) THEN
164	pts_value(j,13) = -1.0
165	ELSE
166	pts_value(j,14) = -1.0
167	ENDIF
168
169	ENDIF
170
171	ENDDO
172
173	!
174	!-- Calculate higher order moments of particle time series quantities,
175	!-- seperately for each particle group (if there is more than one group)
176	DO n = 1, number_of_particles
177
178	pts_value_l(0,17) = pts_value_l(0,17) + ( particles(n)%x - &
179	particles(n)%origin_x - pts_value(0,2) )*2 ! x2
180	pts_value_l(0,18) = pts_value_l(0,18) + ( particles(n)%y - &
181	particles(n)%origin_y - pts_value(0,3) )*2 ! y2
182	pts_value_l(0,19) = pts_value_l(0,19) + ( particles(n)%z - &
183	particles(n)%origin_z - pts_value(0,4) )*2 ! z2
184	pts_value_l(0,20) = pts_value_l(0,20) + ( particles(n)%speed_x - &
185	pts_value(0,6) )*2 ! u2
186	pts_value_l(0,21) = pts_value_l(0,21) + ( particles(n)%speed_y - &
187	pts_value(0,7) )*2 ! v2
188	pts_value_l(0,22) = pts_value_l(0,22) + ( particles(n)%speed_z - &
189	pts_value(0,8) )*2 ! w2
190	pts_value_l(0,23) = pts_value_l(0,23) + ( particles(n)%speed_x_sgs - &
191	pts_value(0,9) )**2 ! u"2
192	pts_value_l(0,24) = pts_value_l(0,24) + ( particles(n)%speed_y_sgs - &
193	pts_value(0,10) )**2 ! v"2
194	pts_value_l(0,25) = pts_value_l(0,25) + ( particles(n)%speed_z_sgs - &
195	pts_value(0,11) )**2 ! w"2
196	!
197	!-- Repeat the same for the respective particle group
198	IF ( number_of_particle_groups > 1 ) THEN
199	j = particles(n)%group
200
201	pts_value_l(j,17) = pts_value_l(j,17) + ( particles(n)%x - &
202	particles(n)%origin_x - pts_value(j,2) )**2
203	pts_value_l(j,18) = pts_value_l(j,18) + ( particles(n)%y - &
204	particles(n)%origin_y - pts_value(j,3) )**2
205	pts_value_l(j,19) = pts_value_l(j,19) + ( particles(n)%z - &
206	particles(n)%origin_z - pts_value(j,4) )**2
207	pts_value_l(j,20) = pts_value_l(j,20) + ( particles(n)%speed_x - &
208	pts_value(j,6) )**2
209	pts_value_l(j,21) = pts_value_l(j,21) + ( particles(n)%speed_y - &
210	pts_value(j,7) )**2
211	pts_value_l(j,22) = pts_value_l(j,22) + ( particles(n)%speed_z - &
212	pts_value(j,8) )**2
213	pts_value_l(j,23) = pts_value_l(j,23) + ( particles(n)%speed_x_sgs - &
214	pts_value(j,9) )**2
215	pts_value_l(j,24) = pts_value_l(j,24) + ( particles(n)%speed_y_sgs - &
216	pts_value(j,10) )**2
217	pts_value_l(j,25) = pts_value_l(j,25) + ( particles(n)%speed_z_sgs - &
218	pts_value(j,11) )**2
219	ENDIF
220
221	ENDDO
222
223	pts_value_l(0,26) = ( number_of_particles - pts_value(0,1) / numprocs )**2
224	! variance of particle numbers
225	IF ( number_of_particle_groups > 1 ) THEN
226	DO j = 1, number_of_particle_groups
227	pts_value_l(j,26) = ( pts_value_l(j,1) - &
228	pts_value(j,1) / numprocs )**2
229	ENDDO
230	ENDIF
231
232	#if defined( __parallel )
233	!
234	!-- Sum values of the subdomains
235	inum = number_of_particle_groups + 1
236
237	CALL MPI_ALLREDUCE( pts_value_l(0,17), pts_value(0,17), inum*10, MPI_REAL, &
238	MPI_SUM, comm2d, ierr )
239	#else
240	pts_value(:,17:26) = pts_value_l(:,17:26)
241	#endif
242
243	!
244	!-- Normalize the above calculated quantities with the total number of
245	!-- particles
246	IF ( number_of_particle_groups > 1 ) THEN
247	inum = number_of_particle_groups
248	ELSE
249	inum = 0
250	ENDIF
251
252	DO j = 0, inum
253
254	IF ( pts_value(j,1) > 0.0 ) THEN
255	pts_value(j,17:25) = pts_value(j,17:25) / pts_value(j,1)
256	ENDIF
257	pts_value(j,26) = pts_value(j,26) / numprocs
258
259	ENDDO
260
261	#if defined( __netcdf )
262	!
263	!-- Output particle time series quantities in NetCDF format
264	IF ( myid == 0 .AND. netcdf_output ) THEN
265	DO j = 0, inum
266	DO i = 1, dopts_num
267	nc_stat = NF90_PUT_VAR( id_set_pts, id_var_dopts(i,j), &
268	(/ pts_value(j,i) /), &
269	start = (/ dopts_time_count /), &
270	count = (/ 1 /) )
271	IF ( nc_stat /= NF90_NOERR ) CALL handle_netcdf_error( 392 )
272	ENDDO
273	ENDDO
274	ENDIF
275	#endif
276
277	CALL cpu_log( log_point(36), 'data_output_ptseries','stop', 'nobarrier' )
278
279	END SUBROUTINE data_output_ptseries

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