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source: palm/trunk/SOURCE/data_output_ptseries.f90 @ 1920

Last change on this file since 1920 was 1832, checked in by hoffmann, 9 years ago
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[1682]	1	!> @file data_output_ptseries.f90
[1036]	2	!--------------------------------------------------------------------------------!
	3	! This file is part of PALM.
	4	!
	5	! PALM is free software: you can redistribute it and/or modify it under the terms
	6	! of the GNU General Public License as published by the Free Software Foundation,
	7	! either version 3 of the License, or (at your option) any later version.
	8	!
	9	! PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	10	! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	11	! A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	12	!
	13	! You should have received a copy of the GNU General Public License along with
	14	! PALM. If not, see <http://www.gnu.org/licenses/>.
	15	!
[1818]	16	! Copyright 1997-2016 Leibniz Universitaet Hannover
[1036]	17	!--------------------------------------------------------------------------------!
	18	!
[263]	19	! Current revisions:
[1]	20	! -----------------
[1784]	21	!
[1832]	22	!
[1321]	23	! Former revisions:
	24	! -----------------
	25	! $Id: data_output_ptseries.f90 1832 2016-04-07 13:28:15Z suehring $
	26	!
[1832]	27	! 1831 2016-04-07 13:15:51Z hoffmann
	28	! curvature_solution_effects moved to particle_attributes
	29	!
[1784]	30	! 1783 2016-03-06 18:36:17Z raasch
	31	! netcdf module name changed + related changes
	32	!
[1683]	33	! 1682 2015-10-07 23:56:08Z knoop
	34	! Code annotations made doxygen readable
	35	!
[1360]	36	! 1359 2014-04-11 17:15:14Z hoffmann
	37	! New particle structure integrated.
	38	!
[1354]	39	! 1353 2014-04-08 15:21:23Z heinze
	40	! REAL constants provided with KIND-attribute
	41	!
[1329]	42	! 1327 2014-03-21 11:00:16Z raasch
	43	! -netcdf output queries
	44	!
[1321]	45	! 1320 2014-03-20 08:40:49Z raasch
[1320]	46	! ONLY-attribute added to USE-statements,
	47	! kind-parameters added to all INTEGER and REAL declaration statements,
	48	! kinds are defined in new module kinds,
	49	! revision history before 2012 removed,
	50	! comment fields (!:) to be used for variable explanations added to
	51	! all variable declaration statements
[1]	52	!
[1319]	53	! 1318 2014-03-17 13:35:16Z raasch
	54	! barrier argument removed from cpu_log,
	55	! module interfaces removed
	56	!
[1037]	57	! 1036 2012-10-22 13:43:42Z raasch
	58	! code put under GPL (PALM 3.9)
	59	!
[826]	60	! 825 2012-02-19 03:03:44Z raasch
	61	! mean/minimum/maximum particle radius added as output quantity,
	62	! particle attributes speed_x\|y\|z_sgs renamed rvar1\|2\|3
	63	!
[1]	64	! Revision 1.1 2006/08/04 14:24:18 raasch
	65	! Initial revision
	66	!
	67	!
	68	! Description:
	69	! ------------
[1682]	70	!> Output of particle data timeseries in NetCDF format.
[1]	71	!------------------------------------------------------------------------------!
[1682]	72	SUBROUTINE data_output_ptseries
	73
[1]	74
[1320]	75	USE control_parameters, &
[1327]	76	ONLY: dopts_time_count, time_since_reference_point
[1320]	77
	78	USE cpulog, &
	79	ONLY: cpu_log, log_point
	80
	81	USE indices, &
[1359]	82	ONLY: nxl, nxr, nys, nyn, nzb, nzt
[1320]	83
	84	USE kinds
	85
[1783]	86	#if defined( __netcdf )
	87	USE NETCDF
	88	#endif
[1320]	89
[1783]	90	USE netcdf_interface, &
	91	ONLY: dopts_num, id_set_pts, id_var_dopts, id_var_time_pts, nc_stat, &
	92	netcdf_handle_error
	93
[1320]	94	USE particle_attributes, &
[1831]	95	ONLY: curvature_solution_effects, grid_particles, number_of_particles,&
	96	number_of_particle_groups, particles, prt_count
[1320]	97
[1]	98	USE pegrid
	99
	100	IMPLICIT NONE
	101
	102
[1682]	103	INTEGER(iwp) :: i !<
	104	INTEGER(iwp) :: inum !<
	105	INTEGER(iwp) :: j !<
	106	INTEGER(iwp) :: jg !<
	107	INTEGER(iwp) :: k !<
	108	INTEGER(iwp) :: n !<
[1]	109
[1682]	110	REAL(wp), DIMENSION(:,:), ALLOCATABLE :: pts_value !<
	111	REAL(wp), DIMENSION(:,:), ALLOCATABLE :: pts_value_l !<
[1]	112
	113
	114	CALL cpu_log( log_point(36), 'data_output_ptseries', 'start' )
	115
[1327]	116	IF ( myid == 0 ) THEN
[1]	117	!
	118	!-- Open file for time series output in NetCDF format
	119	dopts_time_count = dopts_time_count + 1
	120	CALL check_open( 109 )
	121	#if defined( __netcdf )
	122	!
	123	!-- Update the particle time series time axis
[291]	124	nc_stat = NF90_PUT_VAR( id_set_pts, id_var_time_pts, &
	125	(/ time_since_reference_point /), &
[1]	126	start = (/ dopts_time_count /), count = (/ 1 /) )
[1783]	127	CALL netcdf_handle_error( 'data_output_ptseries', 391 )
[1]	128	#endif
	129
	130	ENDIF
	131
[825]	132	ALLOCATE( pts_value(0:number_of_particle_groups,dopts_num), &
	133	pts_value_l(0:number_of_particle_groups,dopts_num) )
	134
[1353]	135	pts_value_l = 0.0_wp
	136	pts_value_l(:,16) = 9999999.9_wp ! for calculation of minimum radius
[1]	137
	138	!
	139	!-- Calculate or collect the particle time series quantities for all particles
	140	!-- and seperately for each particle group (if there is more than one group)
[1359]	141	DO i = nxl, nxr
	142	DO j = nys, nyn
	143	DO k = nzb, nzt
	144	number_of_particles = prt_count(k,j,i)
	145	IF (number_of_particles <= 0) CYCLE
	146	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	147	DO n = 1, number_of_particles
[1]	148
[1359]	149	IF ( particles(n)%particle_mask ) THEN ! Restrict analysis to active particles
[1]	150
[1359]	151	pts_value_l(0,1) = pts_value_l(0,1) + 1.0_wp ! total # of particles
	152	pts_value_l(0,2) = pts_value_l(0,2) + &
	153	( particles(n)%x - particles(n)%origin_x ) ! mean x
	154	pts_value_l(0,3) = pts_value_l(0,3) + &
	155	( particles(n)%y - particles(n)%origin_y ) ! mean y
	156	pts_value_l(0,4) = pts_value_l(0,4) + &
	157	( particles(n)%z - particles(n)%origin_z ) ! mean z
	158	pts_value_l(0,5) = pts_value_l(0,5) + particles(n)%z ! mean z (absolute)
	159	pts_value_l(0,6) = pts_value_l(0,6) + particles(n)%speed_x ! mean u
	160	pts_value_l(0,7) = pts_value_l(0,7) + particles(n)%speed_y ! mean v
	161	pts_value_l(0,8) = pts_value_l(0,8) + particles(n)%speed_z ! mean w
	162	IF ( .NOT. curvature_solution_effects ) THEN
	163	pts_value_l(0,9) = pts_value_l(0,9) + particles(n)%rvar1 ! mean sgsu
	164	pts_value_l(0,10) = pts_value_l(0,10) + particles(n)%rvar2 ! mean sgsv
	165	pts_value_l(0,11) = pts_value_l(0,11) + particles(n)%rvar3 ! mean sgsw
	166	ENDIF
	167	IF ( particles(n)%speed_z > 0.0_wp ) THEN
	168	pts_value_l(0,12) = pts_value_l(0,12) + 1.0_wp ! # of upward moving prts
	169	pts_value_l(0,13) = pts_value_l(0,13) + &
	170	particles(n)%speed_z ! mean w upw.
	171	ELSE
	172	pts_value_l(0,14) = pts_value_l(0,14) + &
	173	particles(n)%speed_z ! mean w down
	174	ENDIF
	175	pts_value_l(0,15) = pts_value_l(0,15) + particles(n)%radius ! mean rad
	176	pts_value_l(0,16) = MIN( pts_value_l(0,16), particles(n)%radius ) ! minrad
	177	pts_value_l(0,17) = MAX( pts_value_l(0,17), particles(n)%radius ) ! maxrad
	178	pts_value_l(0,18) = pts_value_l(0,18) + 1.0_wp
	179	pts_value_l(0,19) = pts_value_l(0,18) + 1.0_wp
[1]	180	!
[1359]	181	!-- Repeat the same for the respective particle group
	182	IF ( number_of_particle_groups > 1 ) THEN
	183	jg = particles(n)%group
[1]	184
[1359]	185	pts_value_l(jg,1) = pts_value_l(jg,1) + 1.0_wp
	186	pts_value_l(jg,2) = pts_value_l(jg,2) + &
	187	( particles(n)%x - particles(n)%origin_x )
	188	pts_value_l(jg,3) = pts_value_l(jg,3) + &
	189	( particles(n)%y - particles(n)%origin_y )
	190	pts_value_l(jg,4) = pts_value_l(jg,4) + &
	191	( particles(n)%z - particles(n)%origin_z )
	192	pts_value_l(jg,5) = pts_value_l(jg,5) + particles(n)%z
	193	pts_value_l(jg,6) = pts_value_l(jg,6) + particles(n)%speed_x
	194	pts_value_l(jg,7) = pts_value_l(jg,7) + particles(n)%speed_y
	195	pts_value_l(jg,8) = pts_value_l(jg,8) + particles(n)%speed_z
	196	IF ( .NOT. curvature_solution_effects ) THEN
	197	pts_value_l(jg,9) = pts_value_l(jg,9) + particles(n)%rvar1
	198	pts_value_l(jg,10) = pts_value_l(jg,10) + particles(n)%rvar2
	199	pts_value_l(jg,11) = pts_value_l(jg,11) + particles(n)%rvar3
	200	ENDIF
	201	IF ( particles(n)%speed_z > 0.0_wp ) THEN
	202	pts_value_l(jg,12) = pts_value_l(jg,12) + 1.0_wp
	203	pts_value_l(jg,13) = pts_value_l(jg,13) + particles(n)%speed_z
	204	ELSE
	205	pts_value_l(jg,14) = pts_value_l(jg,14) + particles(n)%speed_z
	206	ENDIF
	207	pts_value_l(jg,15) = pts_value_l(jg,15) + particles(n)%radius
	208	pts_value_l(jg,16) = MIN( pts_value(jg,16), particles(n)%radius )
	209	pts_value_l(jg,17) = MAX( pts_value(jg,17), particles(n)%radius )
	210	pts_value_l(jg,18) = pts_value_l(jg,18) + 1.0_wp
	211	pts_value_l(jg,19) = pts_value_l(jg,19) + 1.0_wp
	212	ENDIF
[1]	213
[1359]	214	ENDIF
[1]	215
[1359]	216	ENDDO
	217
	218	ENDDO
	219	ENDDO
[1]	220	ENDDO
	221
[1359]	222
[1]	223	#if defined( __parallel )
	224	!
	225	!-- Sum values of the subdomains
	226	inum = number_of_particle_groups + 1
	227
[622]	228	IF ( collective_wait ) CALL MPI_BARRIER( comm2d, ierr )
[824]	229	CALL MPI_ALLREDUCE( pts_value_l(0,1), pts_value(0,1), 15*inum, MPI_REAL, &
[1]	230	MPI_SUM, comm2d, ierr )
[622]	231	IF ( collective_wait ) CALL MPI_BARRIER( comm2d, ierr )
[824]	232	CALL MPI_ALLREDUCE( pts_value_l(0,16), pts_value(0,16), inum, MPI_REAL, &
[825]	233	MPI_MIN, comm2d, ierr )
	234	IF ( collective_wait ) CALL MPI_BARRIER( comm2d, ierr )
	235	CALL MPI_ALLREDUCE( pts_value_l(0,17), pts_value(0,17), inum, MPI_REAL, &
[1]	236	MPI_MAX, comm2d, ierr )
[622]	237	IF ( collective_wait ) CALL MPI_BARRIER( comm2d, ierr )
[825]	238	CALL MPI_ALLREDUCE( pts_value_l(0,18), pts_value(0,18), inum, MPI_REAL, &
	239	MPI_MAX, comm2d, ierr )
	240	IF ( collective_wait ) CALL MPI_BARRIER( comm2d, ierr )
	241	CALL MPI_ALLREDUCE( pts_value_l(0,19), pts_value(0,19), inum, MPI_REAL, &
[1]	242	MPI_MIN, comm2d, ierr )
	243	#else
[825]	244	pts_value(:,1:19) = pts_value_l(:,1:19)
[1]	245	#endif
	246
	247	!
[825]	248	!-- Normalize the above calculated quantities (except min/max values) with the
	249	!-- total number of particles
[1]	250	IF ( number_of_particle_groups > 1 ) THEN
	251	inum = number_of_particle_groups
	252	ELSE
	253	inum = 0
	254	ENDIF
	255
	256	DO j = 0, inum
	257
[1353]	258	IF ( pts_value(j,1) > 0.0_wp ) THEN
[1]	259
[824]	260	pts_value(j,2:15) = pts_value(j,2:15) / pts_value(j,1)
[1353]	261	IF ( pts_value(j,12) > 0.0_wp .AND. pts_value(j,12) < 1.0_wp ) THEN
[1]	262	pts_value(j,13) = pts_value(j,13) / pts_value(j,12)
[1353]	263	pts_value(j,14) = pts_value(j,14) / ( 1.0_wp - pts_value(j,12) )
	264	ELSEIF ( pts_value(j,12) == 0.0_wp ) THEN
	265	pts_value(j,13) = -1.0_wp
[1]	266	ELSE
[1353]	267	pts_value(j,14) = -1.0_wp
[1]	268	ENDIF
	269
	270	ENDIF
	271
	272	ENDDO
	273
	274	!
	275	!-- Calculate higher order moments of particle time series quantities,
	276	!-- seperately for each particle group (if there is more than one group)
[1359]	277	DO i = nxl, nxr
	278	DO j = nys, nyn
	279	DO k = nzb, nzt
	280	number_of_particles = prt_count(k,j,i)
	281	IF (number_of_particles <= 0) CYCLE
	282	particles => grid_particles(k,j,i)%particles(1:number_of_particles)
	283	DO n = 1, number_of_particles
[1]	284
[1359]	285	pts_value_l(0,20) = pts_value_l(0,20) + ( particles(n)%x - &
	286	particles(n)%origin_x - pts_value(0,2) )*2 ! x2
	287	pts_value_l(0,21) = pts_value_l(0,21) + ( particles(n)%y - &
	288	particles(n)%origin_y - pts_value(0,3) )*2 ! y2
	289	pts_value_l(0,22) = pts_value_l(0,22) + ( particles(n)%z - &
	290	particles(n)%origin_z - pts_value(0,4) )*2 ! z2
	291	pts_value_l(0,23) = pts_value_l(0,23) + ( particles(n)%speed_x - &
	292	pts_value(0,6) )*2 ! u2
	293	pts_value_l(0,24) = pts_value_l(0,24) + ( particles(n)%speed_y - &
	294	pts_value(0,7) )*2 ! v2
	295	pts_value_l(0,25) = pts_value_l(0,25) + ( particles(n)%speed_z - &
	296	pts_value(0,8) )*2 ! w2
	297	IF ( .NOT. curvature_solution_effects ) THEN
	298	pts_value_l(0,26) = pts_value_l(0,26) + ( particles(n)%rvar1 - &
	299	pts_value(0,9) )**2 ! u"2
	300	pts_value_l(0,27) = pts_value_l(0,27) + ( particles(n)%rvar2 - &
	301	pts_value(0,10) )**2 ! v"2
	302	pts_value_l(0,28) = pts_value_l(0,28) + ( particles(n)%rvar3 - &
	303	pts_value(0,11) )**2 ! w"2
	304	ENDIF
[1]	305	!
[1359]	306	!-- Repeat the same for the respective particle group
	307	IF ( number_of_particle_groups > 1 ) THEN
	308	jg = particles(n)%group
[1]	309
[1359]	310	pts_value_l(jg,20) = pts_value_l(jg,20) + ( particles(n)%x - &
	311	particles(n)%origin_x - pts_value(jg,2) )**2
	312	pts_value_l(jg,21) = pts_value_l(jg,21) + ( particles(n)%y - &
	313	particles(n)%origin_y - pts_value(jg,3) )**2
	314	pts_value_l(jg,22) = pts_value_l(jg,22) + ( particles(n)%z - &
	315	particles(n)%origin_z - pts_value(jg,4) )**2
	316	pts_value_l(jg,23) = pts_value_l(jg,23) + ( particles(n)%speed_x - &
	317	pts_value(jg,6) )**2
	318	pts_value_l(jg,24) = pts_value_l(jg,24) + ( particles(n)%speed_y - &
	319	pts_value(jg,7) )**2
	320	pts_value_l(jg,25) = pts_value_l(jg,25) + ( particles(n)%speed_z - &
	321	pts_value(jg,8) )**2
	322	IF ( .NOT. curvature_solution_effects ) THEN
	323	pts_value_l(jg,26) = pts_value_l(jg,26) + ( particles(n)%rvar1 - &
	324	pts_value(jg,9) )**2
	325	pts_value_l(jg,27) = pts_value_l(jg,27) + ( particles(n)%rvar2 - &
	326	pts_value(jg,10) )**2
	327	pts_value_l(jg,28) = pts_value_l(jg,28) + ( particles(n)%rvar3 - &
	328	pts_value(jg,11) )**2
	329	ENDIF
	330	ENDIF
[1]	331
[1359]	332	ENDDO
	333	ENDDO
	334	ENDDO
[1]	335	ENDDO
	336
[825]	337	pts_value_l(0,29) = ( number_of_particles - pts_value(0,1) / numprocs )**2
[1]	338	! variance of particle numbers
	339	IF ( number_of_particle_groups > 1 ) THEN
	340	DO j = 1, number_of_particle_groups
[825]	341	pts_value_l(j,29) = ( pts_value_l(j,1) - &
[1]	342	pts_value(j,1) / numprocs )**2
	343	ENDDO
	344	ENDIF
	345
	346	#if defined( __parallel )
	347	!
	348	!-- Sum values of the subdomains
	349	inum = number_of_particle_groups + 1
	350
[622]	351	IF ( collective_wait ) CALL MPI_BARRIER( comm2d, ierr )
[825]	352	CALL MPI_ALLREDUCE( pts_value_l(0,20), pts_value(0,20), inum*10, MPI_REAL, &
[1]	353	MPI_SUM, comm2d, ierr )
	354	#else
[825]	355	pts_value(:,20:29) = pts_value_l(:,20:29)
[1]	356	#endif
	357
	358	!
	359	!-- Normalize the above calculated quantities with the total number of
	360	!-- particles
	361	IF ( number_of_particle_groups > 1 ) THEN
	362	inum = number_of_particle_groups
	363	ELSE
	364	inum = 0
	365	ENDIF
	366
	367	DO j = 0, inum
	368
[1353]	369	IF ( pts_value(j,1) > 0.0_wp ) THEN
[825]	370	pts_value(j,20:28) = pts_value(j,20:28) / pts_value(j,1)
[1]	371	ENDIF
[825]	372	pts_value(j,29) = pts_value(j,29) / numprocs
[1]	373
	374	ENDDO
	375
	376	#if defined( __netcdf )
	377	!
	378	!-- Output particle time series quantities in NetCDF format
[1327]	379	IF ( myid == 0 ) THEN
[1]	380	DO j = 0, inum
	381	DO i = 1, dopts_num
	382	nc_stat = NF90_PUT_VAR( id_set_pts, id_var_dopts(i,j), &
	383	(/ pts_value(j,i) /), &
	384	start = (/ dopts_time_count /), &
	385	count = (/ 1 /) )
[1783]	386	CALL netcdf_handle_error( 'data_output_ptseries', 392 )
[1]	387	ENDDO
	388	ENDDO
	389	ENDIF
	390	#endif
	391
[825]	392	DEALLOCATE( pts_value, pts_value_l )
	393
[1318]	394	CALL cpu_log( log_point(36), 'data_output_ptseries', 'stop' )
[1]	395
	396	END SUBROUTINE data_output_ptseries

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