[3298] | 1 | !> @file data_output_mask.f90 |
---|
| 2 | !------------------------------------------------------------------------------! |
---|
| 3 | ! This file is part of the PALM model system. |
---|
| 4 | ! |
---|
| 5 | ! PALM is free software: you can redistribute it and/or modify it under the |
---|
| 6 | ! terms of the GNU General Public License as published by the Free Software |
---|
| 7 | ! Foundation, either version 3 of the License, or (at your option) any later |
---|
| 8 | ! version. |
---|
| 9 | ! |
---|
| 10 | ! PALM is distributed in the hope that it will be useful, but WITHOUT ANY |
---|
| 11 | ! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR |
---|
| 12 | ! A PARTICULAR PURPOSE. See the GNU General Public License for more details. |
---|
| 13 | ! |
---|
| 14 | ! You should have received a copy of the GNU General Public License along with |
---|
| 15 | ! PALM. If not, see <http://www.gnu.org/licenses/>. |
---|
| 16 | ! |
---|
| 17 | ! Copyright 1997-2018 Leibniz Universitaet Hannover |
---|
| 18 | !------------------------------------------------------------------------------! |
---|
| 19 | ! |
---|
| 20 | ! Current revisions: |
---|
| 21 | ! ----------------- |
---|
[2032] | 22 | ! |
---|
| 23 | ! |
---|
[3298] | 24 | ! Former revisions: |
---|
| 25 | ! ----------------- |
---|
| 26 | ! $Id: data_output_mask.f90 3435 2018-10-26 18:25:44Z gronemeier $ |
---|
[3435] | 27 | ! Add terrain-following output |
---|
| 28 | ! |
---|
| 29 | ! 3421 2018-10-24 18:39:32Z gronemeier |
---|
[3421] | 30 | ! Renamed output variables |
---|
| 31 | ! |
---|
| 32 | ! 3419 2018-10-24 17:27:31Z gronemeier |
---|
[3298] | 33 | ! Minor formatting (kanani) |
---|
| 34 | ! Call for chem_data_output_mask added (basit) |
---|
| 35 | ! |
---|
| 36 | ! 3274 2018-09-24 15:42:55Z knoop |
---|
| 37 | ! Modularization of all bulk cloud physics code components |
---|
| 38 | ! |
---|
[3274] | 39 | ! 3241 2018-09-12 15:02:00Z raasch |
---|
[3298] | 40 | ! unused variable removed |
---|
| 41 | ! |
---|
| 42 | ! 3083 2018-06-19 14:03:12Z gronemeier |
---|
| 43 | ! |
---|
| 44 | ! |
---|
| 45 | ! 3045 2018-05-28 07:55:41Z Giersch |
---|
| 46 | ! Error messages revised |
---|
| 47 | ! |
---|
| 48 | ! 3030 2018-05-23 14:37:00Z raasch |
---|
| 49 | ! variable if renamed ivar |
---|
| 50 | ! |
---|
| 51 | ! 2718 2018-01-02 08:49:38Z maronga |
---|
| 52 | ! Corrected "Former revisions" section |
---|
| 53 | ! |
---|
| 54 | ! 2696 2017-12-14 17:12:51Z kanani |
---|
| 55 | ! Change in file header (GPL part) |
---|
| 56 | ! |
---|
| 57 | ! 2292 2017-06-20 09:51:42Z schwenkel |
---|
| 58 | ! Implementation of new microphysic scheme: cloud_scheme = 'morrison' |
---|
| 59 | ! includes two more prognostic equations for cloud drop concentration (nc) |
---|
| 60 | ! and cloud water content (qc). |
---|
| 61 | ! |
---|
| 62 | ! 2101 2017-01-05 16:42:31Z suehring |
---|
| 63 | ! |
---|
| 64 | ! 2031 2016-10-21 15:11:58Z knoop |
---|
| 65 | ! renamed variable rho to rho_ocean and rho_av to rho_ocean_av |
---|
| 66 | ! |
---|
| 67 | ! 2000 2016-08-20 18:09:15Z knoop |
---|
| 68 | ! Forced header and separation lines into 80 columns |
---|
| 69 | ! |
---|
| 70 | ! 1980 2016-07-29 15:51:57Z suehring |
---|
| 71 | ! Bugfix, in order to steer user-defined output, setting flag found explicitly |
---|
| 72 | ! to .F. |
---|
| 73 | ! |
---|
| 74 | ! 1976 2016-07-27 13:28:04Z maronga |
---|
| 75 | ! Output of radiation quantities is now done directly in the respective module |
---|
| 76 | ! |
---|
| 77 | ! 1960 2016-07-12 16:34:24Z suehring |
---|
| 78 | ! Separate humidity and passive scalar |
---|
| 79 | ! |
---|
| 80 | ! 2016-03-06 18:36:17Z raasch |
---|
| 81 | ! name change of netcdf routines and module + related changes, |
---|
| 82 | ! switch back of netcdf data format moved from time integration routine to here |
---|
| 83 | ! |
---|
| 84 | ! 1691 2015-10-26 16:17:44Z maronga |
---|
| 85 | ! Added output of radiative heating rates for RRTMG |
---|
| 86 | ! |
---|
| 87 | ! 1682 2015-10-07 23:56:08Z knoop |
---|
| 88 | ! Code annotations made doxygen readable |
---|
| 89 | ! |
---|
| 90 | ! 1585 2015-04-30 07:05:52Z maronga |
---|
| 91 | ! Added support for RRTMG |
---|
| 92 | ! |
---|
| 93 | ! 1438 2014-07-22 14:14:06Z heinze |
---|
| 94 | ! +nr, qc, qr |
---|
| 95 | ! |
---|
| 96 | ! 1359 2014-04-11 17:15:14Z hoffmann |
---|
| 97 | ! New particle structure integrated. |
---|
| 98 | ! |
---|
| 99 | ! 1353 2014-04-08 15:21:23Z heinze |
---|
| 100 | ! REAL constants provided with KIND-attribute |
---|
| 101 | ! |
---|
| 102 | ! 1327 2014-03-21 11:00:16Z raasch |
---|
| 103 | ! |
---|
| 104 | ! |
---|
| 105 | ! 1320 2014-03-20 08:40:49Z raasch |
---|
| 106 | ! ONLY-attribute added to USE-statements, |
---|
| 107 | ! kind-parameters added to all INTEGER and REAL declaration statements, |
---|
| 108 | ! kinds are defined in new module kinds, |
---|
| 109 | ! revision history before 2012 removed, |
---|
| 110 | ! comment fields (!:) to be used for variable explanations added to |
---|
| 111 | ! all variable declaration statements |
---|
| 112 | ! |
---|
| 113 | ! 1318 2014-03-17 13:35:16Z raasch |
---|
| 114 | ! barrier argument removed from cpu_log, |
---|
| 115 | ! module interfaces removed |
---|
| 116 | ! |
---|
| 117 | ! 1092 2013-02-02 11:24:22Z raasch |
---|
| 118 | ! unused variables removed |
---|
| 119 | ! |
---|
| 120 | ! 1036 2012-10-22 13:43:42Z raasch |
---|
| 121 | ! code put under GPL (PALM 3.9) |
---|
| 122 | ! |
---|
| 123 | ! 1031 2012-10-19 14:35:30Z raasch |
---|
| 124 | ! netCDF4 without parallel file support implemented |
---|
| 125 | ! |
---|
| 126 | ! 1007 2012-09-19 14:30:36Z franke |
---|
| 127 | ! Bugfix: calculation of pr must depend on the particle weighting factor, |
---|
| 128 | ! missing calculation of ql_vp added |
---|
| 129 | ! |
---|
| 130 | ! 410 2009-12-04 17:05:40Z letzel |
---|
| 131 | ! Initial version |
---|
| 132 | ! |
---|
| 133 | ! Description: |
---|
| 134 | ! ------------ |
---|
| 135 | !> Masked data output in netCDF format for current mask (current value of mid). |
---|
| 136 | !------------------------------------------------------------------------------! |
---|
| 137 | SUBROUTINE data_output_mask( av ) |
---|
| 138 | |
---|
| 139 | |
---|
| 140 | |
---|
| 141 | #if defined( __netcdf ) |
---|
| 142 | USE arrays_3d, & |
---|
| 143 | ONLY: e, nc, nr, p, pt, q, qc, ql, ql_c, ql_v, qr, rho_ocean, s, sa, & |
---|
| 144 | tend, u, v, vpt, w, d_exner |
---|
| 145 | |
---|
| 146 | USE averaging, & |
---|
| 147 | ONLY: e_av, lpt_av, nc_av, nr_av, p_av, pc_av, pr_av, pt_av, q_av, & |
---|
| 148 | qc_av, ql_av, ql_c_av, ql_v_av, ql_vp_av, qv_av, qr_av, & |
---|
| 149 | rho_ocean_av, s_av, sa_av, u_av, v_av, vpt_av, w_av |
---|
| 150 | |
---|
| 151 | USE basic_constants_and_equations_mod, & |
---|
| 152 | ONLY: lv_d_cp |
---|
| 153 | |
---|
| 154 | USE chemistry_model_mod, & |
---|
| 155 | ONLY: chem_data_output_mask |
---|
| 156 | |
---|
| 157 | USE control_parameters, & |
---|
| 158 | ONLY: air_chemistry, domask, domask_no, domask_time_count, mask_i, & |
---|
| 159 | mask_j, mask_k, mask_size, mask_size_l, mask_start_l, & |
---|
[3435] | 160 | mask_surface, & |
---|
[3298] | 161 | max_masks, message_string, mid, nz_do3d, simulated_time |
---|
| 162 | USE cpulog, & |
---|
| 163 | ONLY: cpu_log, log_point |
---|
| 164 | |
---|
| 165 | USE indices, & |
---|
[3435] | 166 | ONLY: nbgp, nxl, nxr, nyn, nys, nzb, nzt |
---|
[3298] | 167 | |
---|
| 168 | USE kinds |
---|
| 169 | |
---|
| 170 | USE bulk_cloud_model_mod, & |
---|
| 171 | ONLY: bulk_cloud_model |
---|
| 172 | |
---|
| 173 | USE NETCDF |
---|
| 174 | |
---|
| 175 | USE netcdf_interface, & |
---|
| 176 | ONLY: id_set_mask, id_var_domask, id_var_time_mask, nc_stat, & |
---|
| 177 | netcdf_data_format, netcdf_handle_error |
---|
| 178 | |
---|
| 179 | USE particle_attributes, & |
---|
| 180 | ONLY: grid_particles, number_of_particles, particles, & |
---|
| 181 | particle_advection_start, prt_count |
---|
| 182 | |
---|
| 183 | USE pegrid |
---|
| 184 | |
---|
| 185 | USE radiation_model_mod, & |
---|
| 186 | ONLY: radiation, radiation_data_output_mask |
---|
| 187 | |
---|
[3435] | 188 | USE surface_mod, & |
---|
| 189 | ONLY : surf_def_h, surf_lsm_h, surf_usm_h, get_topography_top_index_ji |
---|
| 190 | |
---|
[3298] | 191 | IMPLICIT NONE |
---|
| 192 | |
---|
[3435] | 193 | CHARACTER(LEN=5) :: grid !< flag to distinquish between staggered grids |
---|
| 194 | |
---|
| 195 | INTEGER(iwp) :: av !< |
---|
| 196 | INTEGER(iwp) :: ngp !< |
---|
| 197 | INTEGER(iwp) :: i !< |
---|
| 198 | INTEGER(iwp) :: ivar !< |
---|
| 199 | INTEGER(iwp) :: j !< |
---|
| 200 | INTEGER(iwp) :: k !< |
---|
| 201 | INTEGER(iwp) :: kk !< |
---|
| 202 | INTEGER(iwp) :: n !< |
---|
[3298] | 203 | INTEGER(iwp) :: netcdf_data_format_save !< |
---|
[3435] | 204 | INTEGER(iwp) :: sender !< |
---|
| 205 | INTEGER(iwp) :: topo_top_ind !< k index of highest horizontal surface |
---|
| 206 | INTEGER(iwp) :: ind(6) !< |
---|
| 207 | |
---|
| 208 | LOGICAL :: found !< |
---|
| 209 | LOGICAL :: resorted !< |
---|
| 210 | |
---|
| 211 | REAL(wp) :: mean_r !< |
---|
| 212 | REAL(wp) :: s_r2 !< |
---|
| 213 | REAL(wp) :: s_r3 !< |
---|
[3298] | 214 | |
---|
| 215 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !< |
---|
| 216 | #if defined( __parallel ) |
---|
| 217 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: total_pf !< |
---|
| 218 | #endif |
---|
| 219 | REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !< |
---|
| 220 | |
---|
| 221 | ! |
---|
| 222 | !-- Return, if nothing to output |
---|
| 223 | IF ( domask_no(mid,av) == 0 ) RETURN |
---|
| 224 | |
---|
| 225 | CALL cpu_log (log_point(49),'data_output_mask','start') |
---|
| 226 | |
---|
| 227 | ! |
---|
| 228 | !-- Parallel netcdf output is not tested so far for masked data, hence |
---|
| 229 | !-- netcdf_data_format is switched back to non-paralell output. |
---|
| 230 | netcdf_data_format_save = netcdf_data_format |
---|
| 231 | IF ( netcdf_data_format == 5 ) netcdf_data_format = 3 |
---|
| 232 | IF ( netcdf_data_format == 6 ) netcdf_data_format = 4 |
---|
| 233 | |
---|
| 234 | ! |
---|
| 235 | !-- Open output file. |
---|
| 236 | IF ( myid == 0 .OR. netcdf_data_format > 4 ) THEN |
---|
| 237 | CALL check_open( 200+mid+av*max_masks ) |
---|
| 238 | ENDIF |
---|
| 239 | |
---|
| 240 | ! |
---|
| 241 | !-- Allocate total and local output arrays. |
---|
| 242 | #if defined( __parallel ) |
---|
| 243 | IF ( myid == 0 ) THEN |
---|
| 244 | ALLOCATE( total_pf(mask_size(mid,1),mask_size(mid,2),mask_size(mid,3)) ) |
---|
| 245 | ENDIF |
---|
| 246 | #endif |
---|
| 247 | ALLOCATE( local_pf(mask_size_l(mid,1),mask_size_l(mid,2), & |
---|
| 248 | mask_size_l(mid,3)) ) |
---|
| 249 | |
---|
| 250 | ! |
---|
| 251 | !-- Update the netCDF time axis. |
---|
| 252 | domask_time_count(mid,av) = domask_time_count(mid,av) + 1 |
---|
| 253 | IF ( myid == 0 .OR. netcdf_data_format > 4 ) THEN |
---|
| 254 | nc_stat = NF90_PUT_VAR( id_set_mask(mid,av), id_var_time_mask(mid,av), & |
---|
| 255 | (/ simulated_time /), & |
---|
| 256 | start = (/ domask_time_count(mid,av) /), & |
---|
| 257 | count = (/ 1 /) ) |
---|
| 258 | CALL netcdf_handle_error( 'data_output_mask', 460 ) |
---|
| 259 | ENDIF |
---|
| 260 | |
---|
| 261 | ! |
---|
| 262 | !-- Loop over all variables to be written. |
---|
| 263 | ivar = 1 |
---|
| 264 | |
---|
| 265 | DO WHILE ( domask(mid,av,ivar)(1:1) /= ' ' ) |
---|
| 266 | ! |
---|
| 267 | !-- Reallocate local_pf on PE 0 since its shape changes during MPI exchange |
---|
| 268 | IF ( netcdf_data_format < 5 .AND. myid == 0 .AND. ivar > 1 ) THEN |
---|
| 269 | DEALLOCATE( local_pf ) |
---|
| 270 | ALLOCATE( local_pf(mask_size_l(mid,1),mask_size_l(mid,2), & |
---|
| 271 | mask_size_l(mid,3)) ) |
---|
| 272 | ENDIF |
---|
| 273 | ! |
---|
[3435] | 274 | !-- Set default grid for terrain-following output |
---|
| 275 | grid = 's' |
---|
| 276 | ! |
---|
[3298] | 277 | !-- Set flag to steer output of radiation, land-surface, or user-defined |
---|
| 278 | !-- quantities |
---|
| 279 | found = .FALSE. |
---|
| 280 | ! |
---|
| 281 | !-- Store the variable chosen. |
---|
| 282 | resorted = .FALSE. |
---|
| 283 | SELECT CASE ( TRIM( domask(mid,av,ivar) ) ) |
---|
| 284 | |
---|
| 285 | CASE ( 'e' ) |
---|
| 286 | IF ( av == 0 ) THEN |
---|
| 287 | to_be_resorted => e |
---|
| 288 | ELSE |
---|
| 289 | to_be_resorted => e_av |
---|
| 290 | ENDIF |
---|
| 291 | |
---|
[3421] | 292 | CASE ( 'thetal' ) |
---|
[3298] | 293 | IF ( av == 0 ) THEN |
---|
| 294 | to_be_resorted => pt |
---|
| 295 | ELSE |
---|
| 296 | to_be_resorted => lpt_av |
---|
| 297 | ENDIF |
---|
| 298 | |
---|
| 299 | CASE ( 'nc' ) |
---|
| 300 | IF ( av == 0 ) THEN |
---|
| 301 | to_be_resorted => nc |
---|
| 302 | ELSE |
---|
| 303 | to_be_resorted => nc_av |
---|
| 304 | ENDIF |
---|
| 305 | |
---|
| 306 | CASE ( 'nr' ) |
---|
| 307 | IF ( av == 0 ) THEN |
---|
| 308 | to_be_resorted => nr |
---|
| 309 | ELSE |
---|
| 310 | to_be_resorted => nr_av |
---|
| 311 | ENDIF |
---|
| 312 | |
---|
| 313 | CASE ( 'p' ) |
---|
| 314 | IF ( av == 0 ) THEN |
---|
| 315 | to_be_resorted => p |
---|
| 316 | ELSE |
---|
| 317 | to_be_resorted => p_av |
---|
| 318 | ENDIF |
---|
| 319 | |
---|
| 320 | CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange) |
---|
| 321 | IF ( av == 0 ) THEN |
---|
| 322 | tend = prt_count |
---|
| 323 | CALL exchange_horiz( tend, nbgp ) |
---|
[3435] | 324 | IF ( .NOT. mask_surface(mid) ) THEN |
---|
| 325 | DO i = 1, mask_size_l(mid,1) |
---|
| 326 | DO j = 1, mask_size_l(mid,2) |
---|
| 327 | DO k = 1, mask_size_l(mid,3) |
---|
| 328 | local_pf(i,j,k) = tend(mask_k(mid,k), & |
---|
| 329 | mask_j(mid,j),mask_i(mid,i)) |
---|
| 330 | ENDDO |
---|
[3298] | 331 | ENDDO |
---|
| 332 | ENDDO |
---|
[3435] | 333 | ELSE |
---|
| 334 | ! |
---|
| 335 | !-- Terrain-following masked output |
---|
| 336 | DO i = 1, mask_size_l(mid,1) |
---|
| 337 | DO j = 1, mask_size_l(mid,2) |
---|
| 338 | ! |
---|
| 339 | !-- Get k index of highest horizontal surface |
---|
| 340 | topo_top_ind = & |
---|
| 341 | get_topography_top_index_ji( mask_j(mid,j), & |
---|
| 342 | mask_i(mid,i), & |
---|
| 343 | grid ) |
---|
| 344 | DO k = 1, mask_size_l(mid,3) |
---|
| 345 | kk = MIN( topo_top_ind+mask_k(mid,k), nzt+1 ) |
---|
| 346 | local_pf(i,j,k) = & |
---|
| 347 | tend(kk,mask_j(mid,j),mask_i(mid,i)) |
---|
| 348 | ENDDO |
---|
| 349 | ENDDO |
---|
| 350 | ENDDO |
---|
| 351 | ENDIF |
---|
[3298] | 352 | resorted = .TRUE. |
---|
| 353 | ELSE |
---|
| 354 | CALL exchange_horiz( pc_av, nbgp ) |
---|
| 355 | to_be_resorted => pc_av |
---|
| 356 | ENDIF |
---|
| 357 | |
---|
| 358 | CASE ( 'pr' ) ! mean particle radius (effective radius) |
---|
| 359 | IF ( av == 0 ) THEN |
---|
| 360 | IF ( simulated_time >= particle_advection_start ) THEN |
---|
| 361 | DO i = nxl, nxr |
---|
| 362 | DO j = nys, nyn |
---|
| 363 | DO k = nzb, nz_do3d |
---|
| 364 | number_of_particles = prt_count(k,j,i) |
---|
| 365 | IF (number_of_particles <= 0) CYCLE |
---|
| 366 | particles => grid_particles(k,j,i)%particles(1:number_of_particles) |
---|
| 367 | s_r2 = 0.0_wp |
---|
| 368 | s_r3 = 0.0_wp |
---|
| 369 | DO n = 1, number_of_particles |
---|
| 370 | IF ( particles(n)%particle_mask ) THEN |
---|
| 371 | s_r2 = s_r2 + grid_particles(k,j,i)%particles(n)%radius**2 * & |
---|
| 372 | grid_particles(k,j,i)%particles(n)%weight_factor |
---|
| 373 | s_r3 = s_r3 + grid_particles(k,j,i)%particles(n)%radius**3 * & |
---|
| 374 | grid_particles(k,j,i)%particles(n)%weight_factor |
---|
| 375 | ENDIF |
---|
| 376 | ENDDO |
---|
| 377 | IF ( s_r2 > 0.0_wp ) THEN |
---|
| 378 | mean_r = s_r3 / s_r2 |
---|
| 379 | ELSE |
---|
| 380 | mean_r = 0.0_wp |
---|
| 381 | ENDIF |
---|
| 382 | tend(k,j,i) = mean_r |
---|
| 383 | ENDDO |
---|
| 384 | ENDDO |
---|
| 385 | ENDDO |
---|
| 386 | CALL exchange_horiz( tend, nbgp ) |
---|
| 387 | ELSE |
---|
| 388 | tend = 0.0_wp |
---|
| 389 | ENDIF |
---|
[3435] | 390 | IF ( .NOT. mask_surface(mid) ) THEN |
---|
| 391 | DO i = 1, mask_size_l(mid,1) |
---|
| 392 | DO j = 1, mask_size_l(mid,2) |
---|
| 393 | DO k = 1, mask_size_l(mid,3) |
---|
| 394 | local_pf(i,j,k) = tend(mask_k(mid,k), & |
---|
| 395 | mask_j(mid,j),mask_i(mid,i)) |
---|
| 396 | ENDDO |
---|
[3298] | 397 | ENDDO |
---|
| 398 | ENDDO |
---|
[3435] | 399 | ELSE |
---|
| 400 | ! |
---|
| 401 | !-- Terrain-following masked output |
---|
| 402 | DO i = 1, mask_size_l(mid,1) |
---|
| 403 | DO j = 1, mask_size_l(mid,2) |
---|
| 404 | ! |
---|
| 405 | !-- Get k index of highest horizontal surface |
---|
| 406 | topo_top_ind = & |
---|
| 407 | get_topography_top_index_ji( mask_j(mid,j), & |
---|
| 408 | mask_i(mid,i), & |
---|
| 409 | grid ) |
---|
| 410 | DO k = 1, mask_size_l(mid,3) |
---|
| 411 | kk = MIN( topo_top_ind+mask_k(mid,k), nzt+1 ) |
---|
| 412 | local_pf(i,j,k) = & |
---|
| 413 | tend(kk,mask_j(mid,j),mask_i(mid,i)) |
---|
| 414 | ENDDO |
---|
| 415 | ENDDO |
---|
| 416 | ENDDO |
---|
| 417 | ENDIF |
---|
[3298] | 418 | resorted = .TRUE. |
---|
| 419 | ELSE |
---|
| 420 | CALL exchange_horiz( pr_av, nbgp ) |
---|
| 421 | to_be_resorted => pr_av |
---|
| 422 | ENDIF |
---|
| 423 | |
---|
[3421] | 424 | CASE ( 'theta' ) |
---|
[3298] | 425 | IF ( av == 0 ) THEN |
---|
| 426 | IF ( .NOT. bulk_cloud_model ) THEN |
---|
| 427 | to_be_resorted => pt |
---|
| 428 | ELSE |
---|
[3435] | 429 | IF ( .NOT. mask_surface(mid) ) THEN |
---|
| 430 | DO i = 1, mask_size_l(mid,1) |
---|
| 431 | DO j = 1, mask_size_l(mid,2) |
---|
| 432 | DO k = 1, mask_size_l(mid,3) |
---|
| 433 | local_pf(i,j,k) = & |
---|
| 434 | pt(mask_k(mid,k),mask_j(mid,j),mask_i(mid,i)) & |
---|
| 435 | + lv_d_cp * d_exner(mask_k(mid,k)) * & |
---|
| 436 | ql(mask_k(mid,k),mask_j(mid,j),mask_i(mid,i)) |
---|
| 437 | ENDDO |
---|
[3298] | 438 | ENDDO |
---|
| 439 | ENDDO |
---|
[3435] | 440 | ELSE |
---|
| 441 | ! |
---|
| 442 | !-- Terrain-following masked output |
---|
| 443 | DO i = 1, mask_size_l(mid,1) |
---|
| 444 | DO j = 1, mask_size_l(mid,2) |
---|
| 445 | ! |
---|
| 446 | !-- Get k index of highest horizontal surface |
---|
| 447 | topo_top_ind = & |
---|
| 448 | get_topography_top_index_ji( mask_j(mid,j), & |
---|
| 449 | mask_i(mid,i), & |
---|
| 450 | grid ) |
---|
| 451 | DO k = 1, mask_size_l(mid,3) |
---|
| 452 | kk = MIN( topo_top_ind+mask_k(mid,k), nzt+1 ) |
---|
| 453 | local_pf(i,j,k) = & |
---|
| 454 | pt(kk,mask_j(mid,j),mask_i(mid,i) ) & |
---|
| 455 | + lv_d_cp * d_exner(kk) * & |
---|
| 456 | ql(kk,mask_j(mid,j),mask_i(mid,i)) |
---|
| 457 | ENDDO |
---|
| 458 | ENDDO |
---|
| 459 | ENDDO |
---|
| 460 | ENDIF |
---|
[3298] | 461 | resorted = .TRUE. |
---|
| 462 | ENDIF |
---|
| 463 | ELSE |
---|
| 464 | to_be_resorted => pt_av |
---|
| 465 | ENDIF |
---|
| 466 | |
---|
| 467 | CASE ( 'q' ) |
---|
| 468 | IF ( av == 0 ) THEN |
---|
| 469 | to_be_resorted => q |
---|
| 470 | ELSE |
---|
| 471 | to_be_resorted => q_av |
---|
| 472 | ENDIF |
---|
| 473 | |
---|
| 474 | CASE ( 'qc' ) |
---|
| 475 | IF ( av == 0 ) THEN |
---|
| 476 | to_be_resorted => qc |
---|
| 477 | ELSE |
---|
| 478 | to_be_resorted => qc_av |
---|
| 479 | ENDIF |
---|
| 480 | |
---|
| 481 | CASE ( 'ql' ) |
---|
| 482 | IF ( av == 0 ) THEN |
---|
| 483 | to_be_resorted => ql |
---|
| 484 | ELSE |
---|
| 485 | to_be_resorted => ql_av |
---|
| 486 | ENDIF |
---|
| 487 | |
---|
| 488 | CASE ( 'ql_c' ) |
---|
| 489 | IF ( av == 0 ) THEN |
---|
| 490 | to_be_resorted => ql_c |
---|
| 491 | ELSE |
---|
| 492 | to_be_resorted => ql_c_av |
---|
| 493 | ENDIF |
---|
| 494 | |
---|
| 495 | CASE ( 'ql_v' ) |
---|
| 496 | IF ( av == 0 ) THEN |
---|
| 497 | to_be_resorted => ql_v |
---|
| 498 | ELSE |
---|
| 499 | to_be_resorted => ql_v_av |
---|
| 500 | ENDIF |
---|
| 501 | |
---|
| 502 | CASE ( 'ql_vp' ) |
---|
| 503 | IF ( av == 0 ) THEN |
---|
| 504 | IF ( simulated_time >= particle_advection_start ) THEN |
---|
| 505 | DO i = nxl, nxr |
---|
| 506 | DO j = nys, nyn |
---|
| 507 | DO k = nzb, nz_do3d |
---|
| 508 | number_of_particles = prt_count(k,j,i) |
---|
| 509 | IF (number_of_particles <= 0) CYCLE |
---|
| 510 | particles => grid_particles(k,j,i)%particles(1:number_of_particles) |
---|
| 511 | DO n = 1, number_of_particles |
---|
| 512 | IF ( particles(n)%particle_mask ) THEN |
---|
| 513 | tend(k,j,i) = tend(k,j,i) + & |
---|
| 514 | particles(n)%weight_factor / & |
---|
| 515 | prt_count(k,j,i) |
---|
| 516 | ENDIF |
---|
| 517 | ENDDO |
---|
| 518 | ENDDO |
---|
| 519 | ENDDO |
---|
| 520 | ENDDO |
---|
| 521 | CALL exchange_horiz( tend, nbgp ) |
---|
| 522 | ELSE |
---|
| 523 | tend = 0.0_wp |
---|
| 524 | ENDIF |
---|
[3435] | 525 | IF ( .NOT. mask_surface(mid) ) THEN |
---|
| 526 | DO i = 1, mask_size_l(mid,1) |
---|
| 527 | DO j = 1, mask_size_l(mid,2) |
---|
| 528 | DO k = 1, mask_size_l(mid,3) |
---|
| 529 | local_pf(i,j,k) = tend(mask_k(mid,k), & |
---|
| 530 | mask_j(mid,j),mask_i(mid,i)) |
---|
| 531 | ENDDO |
---|
[3298] | 532 | ENDDO |
---|
| 533 | ENDDO |
---|
[3435] | 534 | ELSE |
---|
| 535 | ! |
---|
| 536 | !-- Terrain-following masked output |
---|
| 537 | DO i = 1, mask_size_l(mid,1) |
---|
| 538 | DO j = 1, mask_size_l(mid,2) |
---|
| 539 | ! |
---|
| 540 | !-- Get k index of highest horizontal surface |
---|
| 541 | topo_top_ind = & |
---|
| 542 | get_topography_top_index_ji( mask_j(mid,j), & |
---|
| 543 | mask_i(mid,i), & |
---|
| 544 | grid ) |
---|
| 545 | DO k = 1, mask_size_l(mid,3) |
---|
| 546 | kk = MIN( topo_top_ind+mask_k(mid,k), nzt+1 ) |
---|
| 547 | local_pf(i,j,k) = & |
---|
| 548 | tend(kk,mask_j(mid,j),mask_i(mid,i)) |
---|
| 549 | ENDDO |
---|
| 550 | ENDDO |
---|
| 551 | ENDDO |
---|
| 552 | ENDIF |
---|
[3298] | 553 | resorted = .TRUE. |
---|
| 554 | ELSE |
---|
| 555 | CALL exchange_horiz( ql_vp_av, nbgp ) |
---|
| 556 | to_be_resorted => ql_vp_av |
---|
| 557 | ENDIF |
---|
| 558 | |
---|
| 559 | CASE ( 'qv' ) |
---|
| 560 | IF ( av == 0 ) THEN |
---|
[3435] | 561 | IF ( .NOT. mask_surface(mid) ) THEN |
---|
| 562 | DO i = 1, mask_size_l(mid,1) |
---|
| 563 | DO j = 1, mask_size_l(mid,2) |
---|
| 564 | DO k = 1, mask_size_l(mid,3) |
---|
| 565 | local_pf(i,j,k) = & |
---|
| 566 | q(mask_k(mid,k),mask_j(mid,j),mask_i(mid,i)) - & |
---|
| 567 | ql(mask_k(mid,k),mask_j(mid,j),mask_i(mid,i)) |
---|
| 568 | ENDDO |
---|
[3298] | 569 | ENDDO |
---|
| 570 | ENDDO |
---|
[3435] | 571 | ELSE |
---|
| 572 | ! |
---|
| 573 | !-- Terrain-following masked output |
---|
| 574 | DO i = 1, mask_size_l(mid,1) |
---|
| 575 | DO j = 1, mask_size_l(mid,2) |
---|
| 576 | ! |
---|
| 577 | !-- Get k index of highest horizontal surface |
---|
| 578 | topo_top_ind = & |
---|
| 579 | get_topography_top_index_ji( mask_j(mid,j), & |
---|
| 580 | mask_i(mid,i), & |
---|
| 581 | grid ) |
---|
| 582 | DO k = 1, mask_size_l(mid,3) |
---|
| 583 | kk = MIN( topo_top_ind+mask_k(mid,k), nzt+1 ) |
---|
| 584 | local_pf(i,j,k) = & |
---|
| 585 | q(kk,mask_j(mid,j),mask_i(mid,i)) - & |
---|
| 586 | ql(kk,mask_j(mid,j),mask_i(mid,i)) |
---|
| 587 | ENDDO |
---|
| 588 | ENDDO |
---|
| 589 | ENDDO |
---|
| 590 | ENDIF |
---|
[3298] | 591 | resorted = .TRUE. |
---|
| 592 | ELSE |
---|
| 593 | to_be_resorted => qv_av |
---|
| 594 | ENDIF |
---|
| 595 | |
---|
| 596 | CASE ( 'qr' ) |
---|
| 597 | IF ( av == 0 ) THEN |
---|
| 598 | to_be_resorted => qr |
---|
| 599 | ELSE |
---|
| 600 | to_be_resorted => qr_av |
---|
| 601 | ENDIF |
---|
| 602 | |
---|
[3421] | 603 | CASE ( 'rho_sea_water' ) |
---|
[3298] | 604 | IF ( av == 0 ) THEN |
---|
| 605 | to_be_resorted => rho_ocean |
---|
| 606 | ELSE |
---|
| 607 | to_be_resorted => rho_ocean_av |
---|
| 608 | ENDIF |
---|
| 609 | |
---|
| 610 | CASE ( 's' ) |
---|
| 611 | IF ( av == 0 ) THEN |
---|
| 612 | to_be_resorted => s |
---|
| 613 | ELSE |
---|
| 614 | to_be_resorted => s_av |
---|
| 615 | ENDIF |
---|
| 616 | |
---|
| 617 | CASE ( 'sa' ) |
---|
| 618 | IF ( av == 0 ) THEN |
---|
| 619 | to_be_resorted => sa |
---|
| 620 | ELSE |
---|
| 621 | to_be_resorted => sa_av |
---|
| 622 | ENDIF |
---|
| 623 | |
---|
| 624 | CASE ( 'u' ) |
---|
| 625 | IF ( av == 0 ) THEN |
---|
| 626 | to_be_resorted => u |
---|
| 627 | ELSE |
---|
| 628 | to_be_resorted => u_av |
---|
| 629 | ENDIF |
---|
| 630 | |
---|
| 631 | CASE ( 'v' ) |
---|
| 632 | IF ( av == 0 ) THEN |
---|
| 633 | to_be_resorted => v |
---|
| 634 | ELSE |
---|
| 635 | to_be_resorted => v_av |
---|
| 636 | ENDIF |
---|
| 637 | |
---|
[3421] | 638 | CASE ( 'thetav' ) |
---|
[3298] | 639 | IF ( av == 0 ) THEN |
---|
| 640 | to_be_resorted => vpt |
---|
| 641 | ELSE |
---|
| 642 | to_be_resorted => vpt_av |
---|
| 643 | ENDIF |
---|
| 644 | |
---|
| 645 | CASE ( 'w' ) |
---|
[3435] | 646 | grid = 'w' |
---|
[3298] | 647 | IF ( av == 0 ) THEN |
---|
| 648 | to_be_resorted => w |
---|
| 649 | ELSE |
---|
| 650 | to_be_resorted => w_av |
---|
| 651 | ENDIF |
---|
| 652 | |
---|
| 653 | CASE DEFAULT |
---|
[3421] | 654 | |
---|
[3298] | 655 | ! |
---|
| 656 | !-- Radiation quantity |
---|
| 657 | IF ( radiation ) THEN |
---|
| 658 | CALL radiation_data_output_mask(av, domask(mid,av,ivar), found,& |
---|
| 659 | local_pf ) |
---|
| 660 | ENDIF |
---|
| 661 | |
---|
| 662 | IF ( air_chemistry ) THEN |
---|
| 663 | CALL chem_data_output_mask(av, domask(mid,av,ivar), found, & |
---|
| 664 | local_pf ) |
---|
| 665 | ENDIF |
---|
| 666 | ! |
---|
| 667 | !-- User defined quantity |
---|
| 668 | IF ( .NOT. found ) THEN |
---|
| 669 | CALL user_data_output_mask(av, domask(mid,av,ivar), found, & |
---|
| 670 | local_pf ) |
---|
| 671 | ENDIF |
---|
| 672 | |
---|
| 673 | resorted = .TRUE. |
---|
| 674 | |
---|
| 675 | IF ( .NOT. found ) THEN |
---|
| 676 | WRITE ( message_string, * ) 'no masked output available for: ',& |
---|
| 677 | TRIM( domask(mid,av,ivar) ) |
---|
| 678 | CALL message( 'data_output_mask', 'PA0327', 0, 0, 0, 6, 0 ) |
---|
| 679 | ENDIF |
---|
| 680 | |
---|
| 681 | END SELECT |
---|
| 682 | |
---|
| 683 | ! |
---|
| 684 | !-- Resort the array to be output, if not done above |
---|
| 685 | IF ( .NOT. resorted ) THEN |
---|
[3435] | 686 | IF ( .NOT. mask_surface(mid) ) THEN |
---|
| 687 | ! |
---|
| 688 | !-- Default masked output |
---|
| 689 | DO i = 1, mask_size_l(mid,1) |
---|
| 690 | DO j = 1, mask_size_l(mid,2) |
---|
| 691 | DO k = 1, mask_size_l(mid,3) |
---|
| 692 | local_pf(i,j,k) = to_be_resorted(mask_k(mid,k), & |
---|
| 693 | mask_j(mid,j),mask_i(mid,i)) |
---|
| 694 | ENDDO |
---|
[3298] | 695 | ENDDO |
---|
| 696 | ENDDO |
---|
[3435] | 697 | |
---|
| 698 | ELSE |
---|
| 699 | ! |
---|
| 700 | !-- Terrain-following masked output |
---|
| 701 | DO i = 1, mask_size_l(mid,1) |
---|
| 702 | DO j = 1, mask_size_l(mid,2) |
---|
| 703 | ! |
---|
| 704 | !-- Get k index of highest horizontal surface |
---|
| 705 | topo_top_ind = get_topography_top_index_ji( mask_j(mid,j), & |
---|
| 706 | mask_i(mid,i), & |
---|
| 707 | grid ) |
---|
| 708 | ! |
---|
| 709 | !-- Save output array |
---|
| 710 | DO k = 1, mask_size_l(mid,3) |
---|
| 711 | local_pf(i,j,k) = to_be_resorted( & |
---|
| 712 | MIN( topo_top_ind+mask_k(mid,k), & |
---|
| 713 | nzt+1 ), & |
---|
| 714 | mask_j(mid,j), & |
---|
| 715 | mask_i(mid,i) ) |
---|
| 716 | ENDDO |
---|
| 717 | ENDDO |
---|
| 718 | ENDDO |
---|
| 719 | |
---|
| 720 | ENDIF |
---|
[3298] | 721 | ENDIF |
---|
| 722 | |
---|
| 723 | ! |
---|
| 724 | !-- I/O block. I/O methods are implemented |
---|
| 725 | !-- (1) for parallel execution |
---|
| 726 | !-- a. with netCDF 4 parallel I/O-enabled library |
---|
| 727 | !-- b. with netCDF 3 library |
---|
| 728 | !-- (2) for serial execution. |
---|
| 729 | !-- The choice of method depends on the correct setting of preprocessor |
---|
| 730 | !-- directives __parallel and __netcdf4_parallel as well as on the parameter |
---|
| 731 | !-- netcdf_data_format. |
---|
| 732 | #if defined( __parallel ) |
---|
| 733 | #if defined( __netcdf4_parallel ) |
---|
| 734 | IF ( netcdf_data_format > 4 ) THEN |
---|
| 735 | ! |
---|
| 736 | !-- (1) a. Parallel I/O using netCDF 4 (not yet tested) |
---|
| 737 | nc_stat = NF90_PUT_VAR( id_set_mask(mid,av), & |
---|
| 738 | id_var_domask(mid,av,ivar), local_pf, & |
---|
| 739 | start = (/ mask_start_l(mid,1), mask_start_l(mid,2), & |
---|
| 740 | mask_start_l(mid,3), domask_time_count(mid,av) /), & |
---|
| 741 | count = (/ mask_size_l(mid,1), mask_size_l(mid,2), & |
---|
| 742 | mask_size_l(mid,3), 1 /) ) |
---|
| 743 | CALL netcdf_handle_error( 'data_output_mask', 461 ) |
---|
| 744 | ELSE |
---|
| 745 | #endif |
---|
| 746 | ! |
---|
| 747 | !-- (1) b. Conventional I/O only through PE0 |
---|
| 748 | !-- PE0 receives partial arrays from all processors of the respective mask |
---|
| 749 | !-- and outputs them. Here a barrier has to be set, because otherwise |
---|
| 750 | !-- "-MPI- FATAL: Remote protocol queue full" may occur. |
---|
| 751 | CALL MPI_BARRIER( comm2d, ierr ) |
---|
| 752 | |
---|
| 753 | ngp = mask_size_l(mid,1) * mask_size_l(mid,2) * mask_size_l(mid,3) |
---|
| 754 | IF ( myid == 0 ) THEN |
---|
| 755 | ! |
---|
| 756 | !-- Local array can be relocated directly. |
---|
| 757 | total_pf( & |
---|
| 758 | mask_start_l(mid,1):mask_start_l(mid,1)+mask_size_l(mid,1)-1, & |
---|
| 759 | mask_start_l(mid,2):mask_start_l(mid,2)+mask_size_l(mid,2)-1, & |
---|
| 760 | mask_start_l(mid,3):mask_start_l(mid,3)+mask_size_l(mid,3)-1 ) & |
---|
| 761 | = local_pf |
---|
| 762 | ! |
---|
| 763 | !-- Receive data from all other PEs. |
---|
| 764 | DO n = 1, numprocs-1 |
---|
| 765 | ! |
---|
| 766 | !-- Receive index limits first, then array. |
---|
| 767 | !-- Index limits are received in arbitrary order from the PEs. |
---|
| 768 | CALL MPI_RECV( ind(1), 6, MPI_INTEGER, MPI_ANY_SOURCE, 0, & |
---|
| 769 | comm2d, status, ierr ) |
---|
| 770 | ! |
---|
| 771 | !-- Not all PEs have data for the mask |
---|
| 772 | IF ( ind(1) /= -9999 ) THEN |
---|
| 773 | ngp = ( ind(2)-ind(1)+1 ) * (ind(4)-ind(3)+1 ) * & |
---|
| 774 | ( ind(6)-ind(5)+1 ) |
---|
| 775 | sender = status(MPI_SOURCE) |
---|
| 776 | DEALLOCATE( local_pf ) |
---|
| 777 | ALLOCATE(local_pf(ind(1):ind(2),ind(3):ind(4),ind(5):ind(6))) |
---|
| 778 | CALL MPI_RECV( local_pf(ind(1),ind(3),ind(5)), ngp, & |
---|
| 779 | MPI_REAL, sender, 1, comm2d, status, ierr ) |
---|
| 780 | total_pf(ind(1):ind(2),ind(3):ind(4),ind(5):ind(6)) & |
---|
| 781 | = local_pf |
---|
| 782 | ENDIF |
---|
| 783 | ENDDO |
---|
| 784 | |
---|
| 785 | nc_stat = NF90_PUT_VAR( id_set_mask(mid,av), & |
---|
| 786 | id_var_domask(mid,av,ivar), total_pf, & |
---|
| 787 | start = (/ 1, 1, 1, domask_time_count(mid,av) /), & |
---|
| 788 | count = (/ mask_size(mid,1), mask_size(mid,2), & |
---|
| 789 | mask_size(mid,3), 1 /) ) |
---|
| 790 | CALL netcdf_handle_error( 'data_output_mask', 462 ) |
---|
| 791 | |
---|
| 792 | ELSE |
---|
| 793 | ! |
---|
| 794 | !-- If at least part of the mask resides on the PE, send the index |
---|
| 795 | !-- limits for the target array, otherwise send -9999 to PE0. |
---|
| 796 | IF ( mask_size_l(mid,1) > 0 .AND. mask_size_l(mid,2) > 0 .AND. & |
---|
| 797 | mask_size_l(mid,3) > 0 ) & |
---|
| 798 | THEN |
---|
| 799 | ind(1) = mask_start_l(mid,1) |
---|
| 800 | ind(2) = mask_start_l(mid,1) + mask_size_l(mid,1) - 1 |
---|
| 801 | ind(3) = mask_start_l(mid,2) |
---|
| 802 | ind(4) = mask_start_l(mid,2) + mask_size_l(mid,2) - 1 |
---|
| 803 | ind(5) = mask_start_l(mid,3) |
---|
| 804 | ind(6) = mask_start_l(mid,3) + mask_size_l(mid,3) - 1 |
---|
| 805 | ELSE |
---|
| 806 | ind(1) = -9999; ind(2) = -9999 |
---|
| 807 | ind(3) = -9999; ind(4) = -9999 |
---|
| 808 | ind(5) = -9999; ind(6) = -9999 |
---|
| 809 | ENDIF |
---|
| 810 | CALL MPI_SEND( ind(1), 6, MPI_INTEGER, 0, 0, comm2d, ierr ) |
---|
| 811 | ! |
---|
| 812 | !-- If applicable, send data to PE0. |
---|
| 813 | IF ( ind(1) /= -9999 ) THEN |
---|
| 814 | CALL MPI_SEND( local_pf(1,1,1), ngp, MPI_REAL, 0, 1, comm2d, & |
---|
| 815 | ierr ) |
---|
| 816 | ENDIF |
---|
| 817 | ENDIF |
---|
| 818 | ! |
---|
| 819 | !-- A barrier has to be set, because otherwise some PEs may proceed too |
---|
| 820 | !-- fast so that PE0 may receive wrong data on tag 0. |
---|
| 821 | CALL MPI_BARRIER( comm2d, ierr ) |
---|
| 822 | #if defined( __netcdf4_parallel ) |
---|
| 823 | ENDIF |
---|
| 824 | #endif |
---|
| 825 | #else |
---|
| 826 | ! |
---|
| 827 | !-- (2) For serial execution of PALM, the single processor (PE0) holds all |
---|
| 828 | !-- data and writes them directly to file. |
---|
| 829 | nc_stat = NF90_PUT_VAR( id_set_mask(mid,av), & |
---|
| 830 | id_var_domask(mid,av,ivar), local_pf, & |
---|
| 831 | start = (/ 1, 1, 1, domask_time_count(mid,av) /), & |
---|
| 832 | count = (/ mask_size_l(mid,1), mask_size_l(mid,2),& |
---|
| 833 | mask_size_l(mid,3), 1 /) ) |
---|
| 834 | CALL netcdf_handle_error( 'data_output_mask', 463 ) |
---|
| 835 | #endif |
---|
| 836 | |
---|
| 837 | ivar = ivar + 1 |
---|
| 838 | |
---|
| 839 | ENDDO |
---|
| 840 | |
---|
| 841 | ! |
---|
| 842 | !-- Deallocate temporary arrays. |
---|
| 843 | DEALLOCATE( local_pf ) |
---|
| 844 | #if defined( __parallel ) |
---|
| 845 | IF ( myid == 0 ) THEN |
---|
| 846 | DEALLOCATE( total_pf ) |
---|
| 847 | ENDIF |
---|
| 848 | #endif |
---|
| 849 | |
---|
| 850 | ! |
---|
| 851 | !-- Switch back to original format given by user (see beginning of this routine) |
---|
| 852 | netcdf_data_format = netcdf_data_format_save |
---|
| 853 | |
---|
| 854 | CALL cpu_log( log_point(49), 'data_output_mask', 'stop' ) |
---|
| 855 | #endif |
---|
| 856 | |
---|
[3435] | 857 | |
---|
[3298] | 858 | END SUBROUTINE data_output_mask |
---|