[1691] | 1 | !> @file data_output_mask.f90 |
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[1320] | 2 | !--------------------------------------------------------------------------------! |
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| 3 | ! This file is part of PALM. |
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| 4 | ! |
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| 5 | ! PALM is free software: you can redistribute it and/or modify it under the terms |
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| 6 | ! of the GNU General Public License as published by the Free Software Foundation, |
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| 7 | ! either version 3 of the License, or (at your option) any later version. |
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| 8 | ! |
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| 9 | ! PALM is distributed in the hope that it will be useful, but WITHOUT ANY |
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| 10 | ! WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR |
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| 11 | ! A PARTICULAR PURPOSE. See the GNU General Public License for more details. |
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| 12 | ! |
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| 13 | ! You should have received a copy of the GNU General Public License along with |
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| 14 | ! PALM. If not, see <http://www.gnu.org/licenses/>. |
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| 15 | ! |
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[1818] | 16 | ! Copyright 1997-2016 Leibniz Universitaet Hannover |
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[1320] | 17 | !--------------------------------------------------------------------------------! |
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| 18 | ! |
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| 19 | ! Current revisions: |
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| 20 | ! ----------------- |
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[1981] | 21 | ! |
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| 22 | ! |
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[1320] | 23 | ! Former revisions: |
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| 24 | ! ----------------- |
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| 25 | ! $Id: data_output_mask.f90 1981 2016-07-29 15:53:00Z suehring $ |
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| 26 | ! |
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[1981] | 27 | ! 1980 2016-07-29 15:51:57Z suehring |
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| 28 | ! Bugfix, in order to steer user-defined output, setting flag found explicitly |
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| 29 | ! to .F. |
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| 30 | ! |
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[1980] | 31 | ! 1976 2016-07-27 13:28:04Z maronga |
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[1977] | 32 | ! Output of radiation quantities is now done directly in the respective module |
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| 33 | ! |
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[1976] | 34 | ! 1960 2016-07-12 16:34:24Z suehring |
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[1961] | 35 | ! Separate humidity and passive scalar |
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| 36 | ! |
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[1784] | 37 | ! 2016-03-06 18:36:17Z raasch |
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| 38 | ! name change of netcdf routines and module + related changes, |
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| 39 | ! switch back of netcdf data format moved from time integration routine to here |
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| 40 | ! |
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[1960] | 41 | ! 1691 2015-10-26 16:17:44Z maronga |
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[1692] | 42 | ! Added output of radiative heating rates for RRTMG |
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| 43 | ! |
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[1691] | 44 | ! 1682 2015-10-07 23:56:08Z knoop |
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| 45 | ! Code annotations made doxygen readable |
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| 46 | ! |
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| 47 | ! 1585 2015-04-30 07:05:52Z maronga |
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[1586] | 48 | ! Added support for RRTMG |
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| 49 | ! |
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[1585] | 50 | ! 1438 2014-07-22 14:14:06Z heinze |
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[1439] | 51 | ! +nr, qc, qr |
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| 52 | ! |
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[1438] | 53 | ! 1359 2014-04-11 17:15:14Z hoffmann |
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[1360] | 54 | ! New particle structure integrated. |
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| 55 | ! |
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[1359] | 56 | ! 1353 2014-04-08 15:21:23Z heinze |
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[1354] | 57 | ! REAL constants provided with KIND-attribute |
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| 58 | ! |
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[1353] | 59 | ! 1327 2014-03-21 11:00:16Z raasch |
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[1329] | 60 | ! |
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| 61 | ! |
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[1321] | 62 | ! 1320 2014-03-20 08:40:49Z raasch |
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| 63 | ! ONLY-attribute added to USE-statements, |
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| 64 | ! kind-parameters added to all INTEGER and REAL declaration statements, |
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| 65 | ! kinds are defined in new module kinds, |
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| 66 | ! revision history before 2012 removed, |
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| 67 | ! comment fields (!:) to be used for variable explanations added to |
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| 68 | ! all variable declaration statements |
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| 69 | ! |
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[1320] | 70 | ! 1318 2014-03-17 13:35:16Z raasch |
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| 71 | ! barrier argument removed from cpu_log, |
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| 72 | ! module interfaces removed |
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| 73 | ! |
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| 74 | ! 1092 2013-02-02 11:24:22Z raasch |
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| 75 | ! unused variables removed |
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| 76 | ! |
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| 77 | ! 1036 2012-10-22 13:43:42Z raasch |
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| 78 | ! code put under GPL (PALM 3.9) |
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| 79 | ! |
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| 80 | ! 1031 2012-10-19 14:35:30Z raasch |
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| 81 | ! netCDF4 without parallel file support implemented |
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| 82 | ! |
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| 83 | ! 1007 2012-09-19 14:30:36Z franke |
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| 84 | ! Bugfix: calculation of pr must depend on the particle weighting factor, |
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| 85 | ! missing calculation of ql_vp added |
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| 86 | ! |
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| 87 | ! 410 2009-12-04 17:05:40Z letzel |
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| 88 | ! Initial version |
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| 89 | ! |
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| 90 | ! Description: |
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| 91 | ! ------------ |
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[1682] | 92 | !> Masked data output in netCDF format for current mask (current value of mid). |
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[1320] | 93 | !------------------------------------------------------------------------------! |
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[1682] | 94 | SUBROUTINE data_output_mask( av ) |
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[1320] | 95 | |
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[1691] | 96 | |
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[1682] | 97 | |
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[1320] | 98 | #if defined( __netcdf ) |
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| 99 | USE arrays_3d, & |
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[1960] | 100 | ONLY: e, nr, p, pt, q, qc, ql, ql_c, ql_v, qr, rho, s, sa, tend, u, & |
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[1438] | 101 | v, vpt, w |
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[1320] | 102 | |
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| 103 | USE averaging, & |
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[1438] | 104 | ONLY: e_av, lpt_av, nr_av, p_av, pc_av, pr_av, pt_av, q_av, qc_av, & |
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| 105 | ql_av, ql_c_av, ql_v_av, ql_vp_av, qv_av, qr_av, rho_av, s_av, & |
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| 106 | sa_av, u_av, v_av, vpt_av, w_av |
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[1320] | 107 | |
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| 108 | USE cloud_parameters, & |
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| 109 | ONLY: l_d_cp, pt_d_t |
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| 110 | |
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| 111 | USE control_parameters, & |
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[1783] | 112 | ONLY: cloud_physics, domask, domask_no, domask_time_count, mask_i, & |
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| 113 | mask_j, mask_k, mask_size, mask_size_l, mask_start_l, & |
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| 114 | max_masks, message_string, mid, nz_do3d, simulated_time |
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[1320] | 115 | USE cpulog, & |
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| 116 | ONLY: cpu_log, log_point |
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[1438] | 117 | |
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[1320] | 118 | USE indices, & |
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| 119 | ONLY: nbgp, nxl, nxr, nyn, nys, nzb, nzt |
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| 120 | |
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| 121 | USE kinds |
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| 122 | |
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[1783] | 123 | USE NETCDF |
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[1320] | 124 | |
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[1783] | 125 | USE netcdf_interface, & |
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| 126 | ONLY: id_set_mask, id_var_domask, id_var_time_mask, nc_stat, & |
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| 127 | netcdf_data_format, netcdf_handle_error |
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[1320] | 128 | |
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| 129 | USE particle_attributes, & |
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[1359] | 130 | ONLY: grid_particles, number_of_particles, particles, & |
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| 131 | particle_advection_start, prt_count |
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[1320] | 132 | |
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| 133 | USE pegrid |
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| 134 | |
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[1585] | 135 | USE radiation_model_mod, & |
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[1976] | 136 | ONLY: radiation, radiation_data_output_mask |
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[1585] | 137 | |
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[1320] | 138 | IMPLICIT NONE |
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| 139 | |
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[1682] | 140 | INTEGER(iwp) :: av !< |
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| 141 | INTEGER(iwp) :: ngp !< |
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| 142 | INTEGER(iwp) :: i !< |
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| 143 | INTEGER(iwp) :: if !< |
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| 144 | INTEGER(iwp) :: j !< |
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| 145 | INTEGER(iwp) :: k !< |
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| 146 | INTEGER(iwp) :: n !< |
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[1783] | 147 | INTEGER(iwp) :: netcdf_data_format_save !< |
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[1682] | 148 | INTEGER(iwp) :: psi !< |
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| 149 | INTEGER(iwp) :: sender !< |
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| 150 | INTEGER(iwp) :: ind(6) !< |
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[1320] | 151 | |
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[1682] | 152 | LOGICAL :: found !< |
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| 153 | LOGICAL :: resorted !< |
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[1320] | 154 | |
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[1682] | 155 | REAL(wp) :: mean_r !< |
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| 156 | REAL(wp) :: s_r2 !< |
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| 157 | REAL(wp) :: s_r3 !< |
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[1320] | 158 | |
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[1682] | 159 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: local_pf !< |
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[1320] | 160 | #if defined( __parallel ) |
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[1682] | 161 | REAL(wp), DIMENSION(:,:,:), ALLOCATABLE :: total_pf !< |
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[1320] | 162 | #endif |
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[1682] | 163 | REAL(wp), DIMENSION(:,:,:), POINTER :: to_be_resorted !< |
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[1320] | 164 | |
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| 165 | ! |
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| 166 | !-- Return, if nothing to output |
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| 167 | IF ( domask_no(mid,av) == 0 ) RETURN |
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| 168 | |
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| 169 | CALL cpu_log (log_point(49),'data_output_mask','start') |
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| 170 | |
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| 171 | ! |
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[1783] | 172 | !-- Parallel netcdf output is not tested so far for masked data, hence |
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| 173 | !-- netcdf_data_format is switched back to non-paralell output. |
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| 174 | netcdf_data_format_save = netcdf_data_format |
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| 175 | IF ( netcdf_data_format == 5 ) netcdf_data_format = 3 |
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| 176 | IF ( netcdf_data_format == 6 ) netcdf_data_format = 4 |
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| 177 | |
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| 178 | ! |
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[1320] | 179 | !-- Open output file. |
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[1327] | 180 | IF ( myid == 0 .OR. netcdf_data_format > 4 ) THEN |
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[1320] | 181 | CALL check_open( 200+mid+av*max_masks ) |
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| 182 | ENDIF |
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| 183 | |
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| 184 | ! |
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| 185 | !-- Allocate total and local output arrays. |
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| 186 | #if defined( __parallel ) |
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| 187 | IF ( myid == 0 ) THEN |
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| 188 | ALLOCATE( total_pf(mask_size(mid,1),mask_size(mid,2),mask_size(mid,3)) ) |
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| 189 | ENDIF |
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| 190 | #endif |
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| 191 | ALLOCATE( local_pf(mask_size_l(mid,1),mask_size_l(mid,2), & |
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| 192 | mask_size_l(mid,3)) ) |
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| 193 | |
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| 194 | ! |
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| 195 | !-- Update the netCDF time axis. |
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| 196 | domask_time_count(mid,av) = domask_time_count(mid,av) + 1 |
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[1327] | 197 | IF ( myid == 0 .OR. netcdf_data_format > 4 ) THEN |
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[1320] | 198 | nc_stat = NF90_PUT_VAR( id_set_mask(mid,av), id_var_time_mask(mid,av), & |
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| 199 | (/ simulated_time /), & |
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| 200 | start = (/ domask_time_count(mid,av) /), & |
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| 201 | count = (/ 1 /) ) |
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[1783] | 202 | CALL netcdf_handle_error( 'data_output_mask', 460 ) |
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[1320] | 203 | ENDIF |
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| 204 | |
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| 205 | ! |
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| 206 | !-- Loop over all variables to be written. |
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| 207 | if = 1 |
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| 208 | |
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| 209 | DO WHILE ( domask(mid,av,if)(1:1) /= ' ' ) |
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| 210 | ! |
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| 211 | !-- Reallocate local_pf on PE 0 since its shape changes during MPI exchange |
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| 212 | IF ( netcdf_data_format < 5 .AND. myid == 0 .AND. if > 1 ) THEN |
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| 213 | DEALLOCATE( local_pf ) |
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| 214 | ALLOCATE( local_pf(mask_size_l(mid,1),mask_size_l(mid,2), & |
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| 215 | mask_size_l(mid,3)) ) |
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| 216 | ENDIF |
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| 217 | ! |
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[1980] | 218 | !-- Set flag to steer output of radiation, land-surface, or user-defined |
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| 219 | !-- quantities |
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| 220 | found = .FALSE. |
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| 221 | ! |
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[1320] | 222 | !-- Store the variable chosen. |
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| 223 | resorted = .FALSE. |
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| 224 | SELECT CASE ( TRIM( domask(mid,av,if) ) ) |
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| 225 | |
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| 226 | CASE ( 'e' ) |
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| 227 | IF ( av == 0 ) THEN |
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| 228 | to_be_resorted => e |
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| 229 | ELSE |
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| 230 | to_be_resorted => e_av |
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| 231 | ENDIF |
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| 232 | |
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| 233 | CASE ( 'lpt' ) |
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| 234 | IF ( av == 0 ) THEN |
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| 235 | to_be_resorted => pt |
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| 236 | ELSE |
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| 237 | to_be_resorted => lpt_av |
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| 238 | ENDIF |
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| 239 | |
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[1438] | 240 | CASE ( 'nr' ) |
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| 241 | IF ( av == 0 ) THEN |
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| 242 | to_be_resorted => nr |
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| 243 | ELSE |
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| 244 | to_be_resorted => nr_av |
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| 245 | ENDIF |
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| 246 | |
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[1320] | 247 | CASE ( 'p' ) |
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| 248 | IF ( av == 0 ) THEN |
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| 249 | to_be_resorted => p |
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| 250 | ELSE |
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| 251 | to_be_resorted => p_av |
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| 252 | ENDIF |
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| 253 | |
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| 254 | CASE ( 'pc' ) ! particle concentration (requires ghostpoint exchange) |
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| 255 | IF ( av == 0 ) THEN |
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| 256 | tend = prt_count |
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| 257 | CALL exchange_horiz( tend, nbgp ) |
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| 258 | DO i = 1, mask_size_l(mid,1) |
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| 259 | DO j = 1, mask_size_l(mid,2) |
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| 260 | DO k = 1, mask_size_l(mid,3) |
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| 261 | local_pf(i,j,k) = tend(mask_k(mid,k), & |
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| 262 | mask_j(mid,j),mask_i(mid,i)) |
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| 263 | ENDDO |
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| 264 | ENDDO |
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| 265 | ENDDO |
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| 266 | resorted = .TRUE. |
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| 267 | ELSE |
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| 268 | CALL exchange_horiz( pc_av, nbgp ) |
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| 269 | to_be_resorted => pc_av |
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| 270 | ENDIF |
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| 271 | |
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[1359] | 272 | CASE ( 'pr' ) ! mean particle radius (effective radius) |
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[1320] | 273 | IF ( av == 0 ) THEN |
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[1359] | 274 | IF ( simulated_time >= particle_advection_start ) THEN |
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| 275 | DO i = nxl, nxr |
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| 276 | DO j = nys, nyn |
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| 277 | DO k = nzb, nz_do3d |
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| 278 | number_of_particles = prt_count(k,j,i) |
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| 279 | IF (number_of_particles <= 0) CYCLE |
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| 280 | particles => grid_particles(k,j,i)%particles(1:number_of_particles) |
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| 281 | s_r2 = 0.0_wp |
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| 282 | s_r3 = 0.0_wp |
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| 283 | DO n = 1, number_of_particles |
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| 284 | IF ( particles(n)%particle_mask ) THEN |
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| 285 | s_r2 = s_r2 + grid_particles(k,j,i)%particles(n)%radius**2 * & |
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| 286 | grid_particles(k,j,i)%particles(n)%weight_factor |
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| 287 | s_r3 = s_r3 + grid_particles(k,j,i)%particles(n)%radius**3 * & |
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| 288 | grid_particles(k,j,i)%particles(n)%weight_factor |
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| 289 | ENDIF |
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| 290 | ENDDO |
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| 291 | IF ( s_r2 > 0.0_wp ) THEN |
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| 292 | mean_r = s_r3 / s_r2 |
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| 293 | ELSE |
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| 294 | mean_r = 0.0_wp |
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| 295 | ENDIF |
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| 296 | tend(k,j,i) = mean_r |
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[1320] | 297 | ENDDO |
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| 298 | ENDDO |
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| 299 | ENDDO |
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[1359] | 300 | CALL exchange_horiz( tend, nbgp ) |
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| 301 | ELSE |
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| 302 | tend = 0.0_wp |
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| 303 | ENDIF |
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[1320] | 304 | DO i = 1, mask_size_l(mid,1) |
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| 305 | DO j = 1, mask_size_l(mid,2) |
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| 306 | DO k = 1, mask_size_l(mid,3) |
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| 307 | local_pf(i,j,k) = tend(mask_k(mid,k), & |
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| 308 | mask_j(mid,j),mask_i(mid,i)) |
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| 309 | ENDDO |
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| 310 | ENDDO |
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| 311 | ENDDO |
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| 312 | resorted = .TRUE. |
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| 313 | ELSE |
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| 314 | CALL exchange_horiz( pr_av, nbgp ) |
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| 315 | to_be_resorted => pr_av |
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| 316 | ENDIF |
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| 317 | |
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| 318 | CASE ( 'pt' ) |
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| 319 | IF ( av == 0 ) THEN |
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| 320 | IF ( .NOT. cloud_physics ) THEN |
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| 321 | to_be_resorted => pt |
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| 322 | ELSE |
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| 323 | DO i = 1, mask_size_l(mid,1) |
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| 324 | DO j = 1, mask_size_l(mid,2) |
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| 325 | DO k = 1, mask_size_l(mid,3) |
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| 326 | local_pf(i,j,k) = & |
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| 327 | pt(mask_k(mid,k),mask_j(mid,j),mask_i(mid,i)) & |
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| 328 | + l_d_cp * pt_d_t(mask_k(mid,k)) * & |
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| 329 | ql(mask_k(mid,k),mask_j(mid,j),mask_i(mid,i)) |
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| 330 | ENDDO |
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| 331 | ENDDO |
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| 332 | ENDDO |
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| 333 | resorted = .TRUE. |
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| 334 | ENDIF |
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| 335 | ELSE |
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| 336 | to_be_resorted => pt_av |
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| 337 | ENDIF |
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| 338 | |
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| 339 | CASE ( 'q' ) |
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| 340 | IF ( av == 0 ) THEN |
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| 341 | to_be_resorted => q |
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| 342 | ELSE |
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| 343 | to_be_resorted => q_av |
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| 344 | ENDIF |
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| 345 | |
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[1438] | 346 | CASE ( 'qc' ) |
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| 347 | IF ( av == 0 ) THEN |
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| 348 | to_be_resorted => qc |
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| 349 | ELSE |
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| 350 | to_be_resorted => qc_av |
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| 351 | ENDIF |
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| 352 | |
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[1320] | 353 | CASE ( 'ql' ) |
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| 354 | IF ( av == 0 ) THEN |
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| 355 | to_be_resorted => ql |
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| 356 | ELSE |
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| 357 | to_be_resorted => ql_av |
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| 358 | ENDIF |
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| 359 | |
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| 360 | CASE ( 'ql_c' ) |
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| 361 | IF ( av == 0 ) THEN |
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| 362 | to_be_resorted => ql_c |
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| 363 | ELSE |
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| 364 | to_be_resorted => ql_c_av |
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| 365 | ENDIF |
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| 366 | |
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| 367 | CASE ( 'ql_v' ) |
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| 368 | IF ( av == 0 ) THEN |
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| 369 | to_be_resorted => ql_v |
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| 370 | ELSE |
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| 371 | to_be_resorted => ql_v_av |
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| 372 | ENDIF |
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| 373 | |
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| 374 | CASE ( 'ql_vp' ) |
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| 375 | IF ( av == 0 ) THEN |
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[1359] | 376 | IF ( simulated_time >= particle_advection_start ) THEN |
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| 377 | DO i = nxl, nxr |
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| 378 | DO j = nys, nyn |
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| 379 | DO k = nzb, nz_do3d |
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| 380 | number_of_particles = prt_count(k,j,i) |
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| 381 | IF (number_of_particles <= 0) CYCLE |
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| 382 | particles => grid_particles(k,j,i)%particles(1:number_of_particles) |
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| 383 | DO n = 1, number_of_particles |
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| 384 | IF ( particles(n)%particle_mask ) THEN |
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| 385 | tend(k,j,i) = tend(k,j,i) + & |
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[1320] | 386 | particles(n)%weight_factor / & |
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| 387 | prt_count(k,j,i) |
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[1359] | 388 | ENDIF |
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| 389 | ENDDO |
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[1320] | 390 | ENDDO |
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| 391 | ENDDO |
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| 392 | ENDDO |
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[1359] | 393 | CALL exchange_horiz( tend, nbgp ) |
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| 394 | ELSE |
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| 395 | tend = 0.0_wp |
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| 396 | ENDIF |
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[1320] | 397 | DO i = 1, mask_size_l(mid,1) |
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| 398 | DO j = 1, mask_size_l(mid,2) |
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| 399 | DO k = 1, mask_size_l(mid,3) |
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| 400 | local_pf(i,j,k) = tend(mask_k(mid,k), & |
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| 401 | mask_j(mid,j),mask_i(mid,i)) |
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| 402 | ENDDO |
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| 403 | ENDDO |
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| 404 | ENDDO |
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| 405 | resorted = .TRUE. |
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| 406 | ELSE |
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| 407 | CALL exchange_horiz( ql_vp_av, nbgp ) |
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| 408 | to_be_resorted => ql_vp_av |
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| 409 | ENDIF |
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| 410 | |
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| 411 | CASE ( 'qv' ) |
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| 412 | IF ( av == 0 ) THEN |
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| 413 | DO i = 1, mask_size_l(mid,1) |
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| 414 | DO j = 1, mask_size_l(mid,2) |
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| 415 | DO k = 1, mask_size_l(mid,3) |
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| 416 | local_pf(i,j,k) = & |
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| 417 | q(mask_k(mid,k),mask_j(mid,j),mask_i(mid,i)) - & |
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| 418 | ql(mask_k(mid,k),mask_j(mid,j),mask_i(mid,i)) |
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| 419 | ENDDO |
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| 420 | ENDDO |
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| 421 | ENDDO |
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| 422 | resorted = .TRUE. |
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| 423 | ELSE |
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| 424 | to_be_resorted => qv_av |
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| 425 | ENDIF |
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| 426 | |
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[1438] | 427 | CASE ( 'qr' ) |
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| 428 | IF ( av == 0 ) THEN |
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| 429 | to_be_resorted => qr |
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| 430 | ELSE |
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| 431 | to_be_resorted => qr_av |
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| 432 | ENDIF |
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| 433 | |
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[1320] | 434 | CASE ( 'rho' ) |
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| 435 | IF ( av == 0 ) THEN |
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| 436 | to_be_resorted => rho |
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| 437 | ELSE |
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| 438 | to_be_resorted => rho_av |
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| 439 | ENDIF |
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| 440 | |
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| 441 | CASE ( 's' ) |
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| 442 | IF ( av == 0 ) THEN |
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[1960] | 443 | to_be_resorted => s |
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[1320] | 444 | ELSE |
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| 445 | to_be_resorted => s_av |
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| 446 | ENDIF |
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| 447 | |
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| 448 | CASE ( 'sa' ) |
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| 449 | IF ( av == 0 ) THEN |
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| 450 | to_be_resorted => sa |
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| 451 | ELSE |
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| 452 | to_be_resorted => sa_av |
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| 453 | ENDIF |
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| 454 | |
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| 455 | CASE ( 'u' ) |
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| 456 | IF ( av == 0 ) THEN |
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| 457 | to_be_resorted => u |
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| 458 | ELSE |
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| 459 | to_be_resorted => u_av |
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| 460 | ENDIF |
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| 461 | |
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| 462 | CASE ( 'v' ) |
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| 463 | IF ( av == 0 ) THEN |
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| 464 | to_be_resorted => v |
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| 465 | ELSE |
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| 466 | to_be_resorted => v_av |
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| 467 | ENDIF |
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| 468 | |
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| 469 | CASE ( 'vpt' ) |
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| 470 | IF ( av == 0 ) THEN |
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| 471 | to_be_resorted => vpt |
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| 472 | ELSE |
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| 473 | to_be_resorted => vpt_av |
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| 474 | ENDIF |
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| 475 | |
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| 476 | CASE ( 'w' ) |
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| 477 | IF ( av == 0 ) THEN |
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| 478 | to_be_resorted => w |
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| 479 | ELSE |
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| 480 | to_be_resorted => w_av |
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| 481 | ENDIF |
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| 482 | |
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| 483 | CASE DEFAULT |
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[1976] | 484 | |
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[1320] | 485 | ! |
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[1976] | 486 | !-- Radiation quantity |
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| 487 | IF ( radiation ) THEN |
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| 488 | CALL radiation_data_output_mask(av, domask(mid,av,if), found, & |
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| 489 | local_pf ) |
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| 490 | ENDIF |
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| 491 | |
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| 492 | ! |
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[1320] | 493 | !-- User defined quantity |
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[1976] | 494 | IF ( .NOT. found ) THEN |
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| 495 | CALL user_data_output_mask(av, domask(mid,av,if), found, & |
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| 496 | local_pf ) |
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| 497 | ENDIF |
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| 498 | |
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[1320] | 499 | resorted = .TRUE. |
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| 500 | |
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| 501 | IF ( .NOT. found ) THEN |
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| 502 | WRITE ( message_string, * ) 'no output available for: ', & |
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| 503 | TRIM( domask(mid,av,if) ) |
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| 504 | CALL message( 'data_output_mask', 'PA0327', 0, 0, 0, 6, 0 ) |
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| 505 | ENDIF |
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| 506 | |
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| 507 | END SELECT |
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| 508 | |
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| 509 | ! |
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| 510 | !-- Resort the array to be output, if not done above |
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| 511 | IF ( .NOT. resorted ) THEN |
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| 512 | DO i = 1, mask_size_l(mid,1) |
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| 513 | DO j = 1, mask_size_l(mid,2) |
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| 514 | DO k = 1, mask_size_l(mid,3) |
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| 515 | local_pf(i,j,k) = to_be_resorted(mask_k(mid,k), & |
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| 516 | mask_j(mid,j),mask_i(mid,i)) |
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| 517 | ENDDO |
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| 518 | ENDDO |
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| 519 | ENDDO |
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| 520 | ENDIF |
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| 521 | |
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| 522 | ! |
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| 523 | !-- I/O block. I/O methods are implemented |
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| 524 | !-- (1) for parallel execution |
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| 525 | !-- a. with netCDF 4 parallel I/O-enabled library |
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| 526 | !-- b. with netCDF 3 library |
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| 527 | !-- (2) for serial execution. |
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| 528 | !-- The choice of method depends on the correct setting of preprocessor |
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| 529 | !-- directives __parallel and __netcdf4_parallel as well as on the parameter |
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| 530 | !-- netcdf_data_format. |
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| 531 | #if defined( __parallel ) |
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| 532 | #if defined( __netcdf4_parallel ) |
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| 533 | IF ( netcdf_data_format > 4 ) THEN |
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| 534 | ! |
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| 535 | !-- (1) a. Parallel I/O using netCDF 4 (not yet tested) |
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| 536 | nc_stat = NF90_PUT_VAR( id_set_mask(mid,av), & |
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| 537 | id_var_domask(mid,av,if), & |
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| 538 | local_pf, & |
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| 539 | start = (/ mask_start_l(mid,1), mask_start_l(mid,2), & |
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| 540 | mask_start_l(mid,3), domask_time_count(mid,av) /), & |
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| 541 | count = (/ mask_size_l(mid,1), mask_size_l(mid,2), & |
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| 542 | mask_size_l(mid,3), 1 /) ) |
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[1783] | 543 | CALL netcdf_handle_error( 'data_output_mask', 461 ) |
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[1320] | 544 | ELSE |
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| 545 | #endif |
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| 546 | ! |
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| 547 | !-- (1) b. Conventional I/O only through PE0 |
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| 548 | !-- PE0 receives partial arrays from all processors of the respective mask |
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| 549 | !-- and outputs them. Here a barrier has to be set, because otherwise |
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| 550 | !-- "-MPI- FATAL: Remote protocol queue full" may occur. |
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| 551 | CALL MPI_BARRIER( comm2d, ierr ) |
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| 552 | |
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| 553 | ngp = mask_size_l(mid,1) * mask_size_l(mid,2) * mask_size_l(mid,3) |
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| 554 | IF ( myid == 0 ) THEN |
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| 555 | ! |
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| 556 | !-- Local array can be relocated directly. |
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| 557 | total_pf( & |
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| 558 | mask_start_l(mid,1):mask_start_l(mid,1)+mask_size_l(mid,1)-1, & |
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| 559 | mask_start_l(mid,2):mask_start_l(mid,2)+mask_size_l(mid,2)-1, & |
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| 560 | mask_start_l(mid,3):mask_start_l(mid,3)+mask_size_l(mid,3)-1 ) & |
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| 561 | = local_pf |
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| 562 | ! |
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| 563 | !-- Receive data from all other PEs. |
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| 564 | DO n = 1, numprocs-1 |
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| 565 | ! |
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| 566 | !-- Receive index limits first, then array. |
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| 567 | !-- Index limits are received in arbitrary order from the PEs. |
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| 568 | CALL MPI_RECV( ind(1), 6, MPI_INTEGER, MPI_ANY_SOURCE, 0, & |
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| 569 | comm2d, status, ierr ) |
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| 570 | ! |
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| 571 | !-- Not all PEs have data for the mask |
---|
| 572 | IF ( ind(1) /= -9999 ) THEN |
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| 573 | ngp = ( ind(2)-ind(1)+1 ) * (ind(4)-ind(3)+1 ) * & |
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| 574 | ( ind(6)-ind(5)+1 ) |
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| 575 | sender = status(MPI_SOURCE) |
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| 576 | DEALLOCATE( local_pf ) |
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| 577 | ALLOCATE(local_pf(ind(1):ind(2),ind(3):ind(4),ind(5):ind(6))) |
---|
| 578 | CALL MPI_RECV( local_pf(ind(1),ind(3),ind(5)), ngp, & |
---|
| 579 | MPI_REAL, sender, 1, comm2d, status, ierr ) |
---|
| 580 | total_pf(ind(1):ind(2),ind(3):ind(4),ind(5):ind(6)) & |
---|
| 581 | = local_pf |
---|
| 582 | ENDIF |
---|
| 583 | ENDDO |
---|
| 584 | |
---|
| 585 | nc_stat = NF90_PUT_VAR( id_set_mask(mid,av), & |
---|
| 586 | id_var_domask(mid,av,if), total_pf, & |
---|
| 587 | start = (/ 1, 1, 1, domask_time_count(mid,av) /), & |
---|
| 588 | count = (/ mask_size(mid,1), mask_size(mid,2), & |
---|
| 589 | mask_size(mid,3), 1 /) ) |
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[1783] | 590 | CALL netcdf_handle_error( 'data_output_mask', 462 ) |
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[1320] | 591 | |
---|
| 592 | ELSE |
---|
| 593 | ! |
---|
| 594 | !-- If at least part of the mask resides on the PE, send the index |
---|
| 595 | !-- limits for the target array, otherwise send -9999 to PE0. |
---|
| 596 | IF ( mask_size_l(mid,1) > 0 .AND. mask_size_l(mid,2) > 0 .AND. & |
---|
| 597 | mask_size_l(mid,3) > 0 ) & |
---|
| 598 | THEN |
---|
| 599 | ind(1) = mask_start_l(mid,1) |
---|
| 600 | ind(2) = mask_start_l(mid,1) + mask_size_l(mid,1) - 1 |
---|
| 601 | ind(3) = mask_start_l(mid,2) |
---|
| 602 | ind(4) = mask_start_l(mid,2) + mask_size_l(mid,2) - 1 |
---|
| 603 | ind(5) = mask_start_l(mid,3) |
---|
| 604 | ind(6) = mask_start_l(mid,3) + mask_size_l(mid,3) - 1 |
---|
| 605 | ELSE |
---|
| 606 | ind(1) = -9999; ind(2) = -9999 |
---|
| 607 | ind(3) = -9999; ind(4) = -9999 |
---|
| 608 | ind(5) = -9999; ind(6) = -9999 |
---|
| 609 | ENDIF |
---|
| 610 | CALL MPI_SEND( ind(1), 6, MPI_INTEGER, 0, 0, comm2d, ierr ) |
---|
| 611 | ! |
---|
| 612 | !-- If applicable, send data to PE0. |
---|
| 613 | IF ( ind(1) /= -9999 ) THEN |
---|
| 614 | CALL MPI_SEND( local_pf(1,1,1), ngp, MPI_REAL, 0, 1, comm2d, & |
---|
| 615 | ierr ) |
---|
| 616 | ENDIF |
---|
| 617 | ENDIF |
---|
| 618 | ! |
---|
| 619 | !-- A barrier has to be set, because otherwise some PEs may proceed too |
---|
| 620 | !-- fast so that PE0 may receive wrong data on tag 0. |
---|
| 621 | CALL MPI_BARRIER( comm2d, ierr ) |
---|
| 622 | #if defined( __netcdf4_parallel ) |
---|
| 623 | ENDIF |
---|
| 624 | #endif |
---|
| 625 | #else |
---|
| 626 | ! |
---|
| 627 | !-- (2) For serial execution of PALM, the single processor (PE0) holds all |
---|
| 628 | !-- data and writes them directly to file. |
---|
| 629 | nc_stat = NF90_PUT_VAR( id_set_mask(mid,av), & |
---|
| 630 | id_var_domask(mid,av,if), & |
---|
| 631 | local_pf, & |
---|
| 632 | start = (/ 1, 1, 1, domask_time_count(mid,av) /), & |
---|
| 633 | count = (/ mask_size_l(mid,1), mask_size_l(mid,2), & |
---|
| 634 | mask_size_l(mid,3), 1 /) ) |
---|
[1783] | 635 | CALL netcdf_handle_error( 'data_output_mask', 463 ) |
---|
[1320] | 636 | #endif |
---|
| 637 | |
---|
| 638 | if = if + 1 |
---|
| 639 | |
---|
| 640 | ENDDO |
---|
| 641 | |
---|
| 642 | ! |
---|
| 643 | !-- Deallocate temporary arrays. |
---|
| 644 | DEALLOCATE( local_pf ) |
---|
| 645 | #if defined( __parallel ) |
---|
| 646 | IF ( myid == 0 ) THEN |
---|
| 647 | DEALLOCATE( total_pf ) |
---|
| 648 | ENDIF |
---|
| 649 | #endif |
---|
| 650 | |
---|
[1783] | 651 | ! |
---|
| 652 | !-- Switch back to original format given by user (see beginning of this routine) |
---|
| 653 | netcdf_data_format = netcdf_data_format_save |
---|
[1320] | 654 | |
---|
| 655 | CALL cpu_log( log_point(49), 'data_output_mask', 'stop' ) |
---|
| 656 | #endif |
---|
| 657 | |
---|
| 658 | END SUBROUTINE data_output_mask |
---|