1 | #!/bin/ksh |
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2 | # subjob - Plot-Shellskript Version: @(#)SUBJOB 1.0 |
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3 | # $Id: subjob 749 2011-08-21 10:49:37Z helmke $ |
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4 | |
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5 | # Prozedur zum automatischen Generieren von Batch-Jobs, die unter NQS |
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6 | # laufen sollen und deren Ergebnis (Dayfile) zum Job-generierenden |
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7 | # Host zurueckgeschickt werden sollen |
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8 | |
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9 | |
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10 | # letzte Aenderung: |
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11 | # 29/06/94 - Siggi - Beginn mit Erstellung der Originalversion |
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12 | # 08/07/94 - Siggi - Originalversion abgeschlossen (Version 1.0) |
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13 | # 06/02/98 - Siggi - berte validiert |
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14 | # 27/01/01 - Siggi - ground.yonsei.ac.kr validiert, Jobs zur T3E in Korea |
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15 | # moeglich |
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16 | # 08/02/01 - Siggi - alle subjob-Meldungen ins englische uebersetzt |
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17 | # 25/05/02 - Siggi - Unterstuetzung des LoadLeveler |
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18 | # 30/05/02 - Siggi - Validierung fuer ibm-Rechner in Seoul (nobel) sowie |
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19 | # allgemeine Anpassungen fuer ibm-Rechner |
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20 | # 15/10/02 - Siggi - Neue Default-Jobklasse (p_normal) fuer IBM in Seoul |
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21 | # Ruecktransfer des Jobprotokolls fuer diese |
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22 | # Maschine abgeschaltet |
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23 | # 31/10/02 - Siggi - berni validiert |
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24 | # 06/11/02 - Siggi - Neue Jobklassen auf ibmb und ibmh |
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25 | # 08/11/02 - Siggi - quanero validiert |
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26 | # 11/12/02 - Siggi - Notification fuer Transfer-Jobs abgeschaltet |
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27 | # 23/01/03 - Siggi - hostname nobel changed to nobela |
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28 | # 06/02/03 - Siggi - gregale validated |
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29 | # 12/02/03 - Siggi - orkan and maestro validated |
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30 | # 21/02/03 - Siggi - all nobel nodes in Seoul validated |
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31 | # 12/03/03 - Siggi - nec at DKRZ validated |
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32 | # 13/03/03 - Siggi - new nqs resource variable Memory |
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33 | # 07/04/03 - Siggi - processor request option -c on nech needs tasks per |
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34 | # node |
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35 | # 11/04/03 - Siggi - network on ibms has attribute "shared" |
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36 | # 31/07/03 - Siggi - nqs2 on nech implemented (provisional: -h nech2) |
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37 | # cxxl added to ibmh |
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38 | # 29/08/03 - Siggi - changes in job queues and communication system on |
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39 | # ibms |
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40 | # 24/10/03 - Siggi - using alternate hanni address 130.75.4.2 |
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41 | # 30/10/03 - Siggi - nech is not supported any more |
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42 | # 10/11/03 - Siggi - nech2 renamed to nech |
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43 | # 20/11/03 - Siggi - submit command on nech changed from qsub.test to qsub |
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44 | # 29/03/04 - Siggi - ground not supported any more, gfdl3 validated |
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45 | # 31/03/04 - Siggi - new option -N for node usage |
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46 | # 12/04/04 - Siggi - scp2 instead of scp used for transfer from decalpha |
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47 | # due to error in ssh installation (otherwise a prompt |
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48 | # for the password appears) |
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49 | # 23/07/04 - Siggi - changes due to the new berni configuration |
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50 | # (federation switch) |
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51 | # 01/09/04 - Gerald new job-classes on hanni |
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52 | # 08/09/04 - Siggi - hanni IP address changed to 130.75.4.10 |
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53 | # 23/11/04 - Siggi - new job class cdata on hanni and berni |
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54 | # 03/12/04 - Siggi - notification on ibm switched of in case of |
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55 | # delete_dayfile = true, node usage in cdev set to |
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56 | # shared |
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57 | # 16/02/05 - Gerald hababai validated |
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58 | # 29/03/05 - Micha - new job class channi on hanni |
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59 | # 11/05/05 - Siggi - ConsumableMemory is now required as resource keyword |
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60 | # on ibms |
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61 | # 24/05/05 - Siggi - Default queue on ibms changed from p_normal_1.3 to |
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62 | # p_normal |
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63 | # 30/06/05 - Siggi - network changed for queue cdev from "us" to "ip" |
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64 | # 12/07/05 - Siggi - in network.mpi on ibmh/ibmb "csss" changed to |
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65 | # "sn_all", new job class cexp |
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66 | # 08/09/05 - Siggi - IP-address of gfdl3 changed |
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67 | # 31/10/05 - Siggi - new job class pp on hurricane, serial jobs on |
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68 | # hurricane (with -X0) |
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69 | # 01/11/05 - Siggi - missing queue for jobs submitted on nech (for nech) |
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70 | # added |
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71 | # 30/12/05 - Siggi - change of IP adresses in subnet 130.75.105 |
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72 | # 09/02/06 - Siggi - ibmy admitted |
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73 | # 10/02/06 - Siggi - scp2 changed to /bin/scp on decalpha |
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74 | # 13/04/06 - Siggi - ostria admitted |
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75 | # 18/04/06 - Siggi - new option -O for OpenMP usage |
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76 | # 24/05/06 - Siggi - lctit admitted, ftpjob renamed scpjob |
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77 | # 25/07/06 - Siggi - gfdl5 (ibmy) admitted for submitting jobs |
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78 | # 27/09/06 - Siggi - breg/hreg extended with berni/hanni |
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79 | # 25/10/06 - Siggi - data_limit set to 1.76 GByte on hanni and berni |
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80 | # 28/11/06 - Siggi - levanto admitted |
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81 | # 13/02/07 - Siggi - hpmuk releated code removed |
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82 | # 01/03/07 - Siggi - adjustments for RIAM machines gate and NEC-SX8 (n-sx) |
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83 | # 12/04/07 - Siggi - option -f (filetransfer protocol) removed, scp only |
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84 | # 27/07/07 - Siggi - autan admitted |
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85 | # 03/08/07 - Marcus- lcfimm admitted |
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86 | # 08/10/07 - Siggi - further job classes added for hanni (csoloh...) |
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87 | # 15/10/07 - Siggi - preliminary adjustments for lctit based on Jin's |
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88 | # suggestions |
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89 | # 19/10/07 - Marcus- add new optional argument -g group_number |
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90 | # 19/10/07 - Siggi - a ";" was missing in the last change done by Marcus |
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91 | # 30/10/07 - Marcus- further adjustments for queues on lctit |
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92 | # 15/05/08 - Siggi - adjustments for lcxt4 (Bergen Center for Computational |
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93 | # Science) |
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94 | # 14/07/08 - Siggi - adjustments for lcsgih |
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95 | # 23/09/08 - Gerald- paesano admitted |
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96 | # 02/10/08 - Siggi - PBS adjustments for lcxt4 |
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97 | # 02/03/09 - Siggi - Adjustments for new NEC-SX9 at RIAM |
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98 | # 16/04/09 - Marcus- Adjustments for lcsgib and lcsgih |
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99 | # 21/04/09 - Siggi - adjustments for new IBM at DKRZ, which is now ibmh |
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100 | # 18/05/09 - Siggi - Settings for serial jobs on lcsgi changed |
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101 | # 24/06/09 - BjornM- adjustments for lcxt4 (loading modules manually) |
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102 | # 08/07/09 - Siggi - option -e added (email notification on lcsgih/b) |
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103 | # 20/07/09 - Siggi - On lcsgi, jobs for returning the job protocol are |
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104 | # now run on the data nodes (feature=data) |
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105 | # 25/08/09 - BjornM- adapted for lck |
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106 | # 26/08/09 - Marcus- caurus admitted; optional qos feature hiprio on lcsgi |
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107 | # 03/09/09 - Siggi - PBS sgi feature directive only used if explicitly |
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108 | # set in the config file by the user |
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109 | # 16/10/09 - Carolin-adjustments for archiving on SGI-ICE of binary files; |
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110 | # adding special1q |
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111 | # 01/12/09 - BjornM- re-adjustments for lcxt4, added sno (130.75.105.113) |
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112 | # 16/10/09 - Carolin-adding permq |
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113 | # 01/02/10 - Siggi - adapted for lcxt5m and lckyoto (Fujitsu HX600) |
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114 | # 03/02/10 - Siggi - bug in serial jobs removed |
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115 | # 26/02/10 - BjornM- re-adjustments for lcxt4 (new modules, email |
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116 | # notification) |
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117 | # 01/03/10 - Siggi - loading of modules controlled by environment variable |
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118 | # module_calls |
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119 | # 17/08/10 - BjornM- re-adjustments for lcxt4 (location of qsub) |
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120 | # 25/08/10 - BjornM- account geofysisk replaced by guest for lcxt4 |
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121 | # 25/08/10 - Siggi - new variable project_account in pbs-statements for |
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122 | # lcxt4 |
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123 | # 08/12/10 - Siggi - initialization of the module command changed for |
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124 | # SGI-ICE/lcsgi |
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125 | # adjustments for Kyushu Univ. (lcrte, ibmku) |
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126 | # 14/12/10 - Siggi - adjustments for new Tsubame system at Tokyo |
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127 | # institute of technology (lctit) |
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128 | # 02/02/11 - Siggi - further asjustments for Tsubame concerning openMP |
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129 | # 06/03/11 - Siggi - adjustments for ibmkisti |
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130 | # 17/03/11 - Siggi - adjustments for openmp usage on ibmkisti |
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131 | # 03/04/11 - Micha - added lckordi |
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132 | # 17/08/11 - Siggi - hicegate0 added |
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133 | # 18/08/11 - Siggi - workaround on lcsgi in order to avoid appends to file |
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134 | # last_job_transfer_protocol |
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135 | # 21/08/11 - Siggi - inferno admitted |
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136 | |
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137 | |
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138 | |
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139 | # VARIABLENVEREINBARUNGEN + DEFAULTWERTE |
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140 | delete_dayfile=false |
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141 | email_notification=none |
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142 | group_number=none |
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143 | locat=normal |
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144 | no_default_queue=none |
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145 | no_submit=false |
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146 | job_catalog="~/job_queue" |
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147 | job_name=none |
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148 | local_user=$LOGNAME |
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149 | node_usage=shared |
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150 | numprocs=0 |
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151 | punkte="..........................................................." |
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152 | submcom=qsub |
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153 | queue=default |
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154 | remote_host=none |
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155 | remote_user="" |
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156 | verify=true |
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157 | |
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158 | typeset -i cputime=0 memory=0 Memory=0 minuten resttime sekunden stunden |
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159 | typeset -i inumprocs mpi_tasks=0 nodes=0 processes_per_node=0 tasks_per_node=0 threads_per_task=1 |
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160 | typeset -L20 spalte1 |
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161 | typeset -R40 spalte2 |
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162 | typeset -L60 spalte3 |
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163 | |
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164 | |
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165 | |
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166 | # FEHLERBEHANDLUNG |
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167 | # BEI EXIT: |
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168 | trap 'if [[ $locat != normal ]] |
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169 | then |
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170 | case $locat in |
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171 | (option) printf "\n --> available optios can be displayed" |
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172 | printf " by typing:" |
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173 | printf "\n \"subjob ?\" \n";; |
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174 | (ftpcopy|parameter|scp|verify) printf "\n";; |
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175 | (*) printf "\n +++ unknown error" |
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176 | printf "\n please inform S. Raasch!\n" |
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177 | esac |
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178 | [[ -f $job_to_send ]] && rm $job_to_send |
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179 | printf "\n\n+++ SUBJOB killed \n\n" |
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180 | fi' exit |
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181 | |
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182 | |
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183 | # BEI TERMINAL-BREAK: |
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184 | trap '[[ -f $job_to_send ]] && rm $job_to_send |
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185 | printf "\n\n+++ SUBJOB killed \n\n" |
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186 | exit |
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187 | ' 2 |
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188 | |
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189 | |
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190 | |
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191 | |
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192 | # LOKALEN HOSTNAMEN FESTSTELLEN |
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193 | local_host=$(hostname) |
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194 | |
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195 | |
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196 | |
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197 | # HOSTSPEZIFISCHE VARIABLEN VEREINBAREN BZW. PRUEFEN, OB LOKALER HOST |
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198 | # UEBERHAUPT ZULAESSIG IST |
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199 | # Note: One of the entries for "lck" or "lckordi" always has to be |
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200 | # comment out, because the hostname (node*) is same for both machines |
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201 | case $local_host in |
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202 | (atmos) local_addres=172.20.25.35; local_host=lcide;; |
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203 | (autan) local_addres=130.75.105.57; local_host=lcmuk;; |
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204 | (bora) local_addres=130.75.105.103; local_host=lcmuk;; |
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205 | (bd1) local_addres=130.73.232.64; local_host=lcsgib;; |
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206 | (bd2) local_addres=130.73.232.65; local_host=lcsgib;; |
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207 | (bd3) local_addres=130.73.232.66; local_host=lcsgib;; |
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208 | (bd4) local_addres=130.73.232.67; local_host=lcsgib;; |
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209 | (b01*|bicegate1) local_addres=130.73.232.102; local_host=lcsgib;; |
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210 | (bicegate2) local_addres=130.73.232.103; local_host=lcsgib;; |
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211 | (blizzard1) local_addres=136.172.40.15; local_host=ibmh;; |
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212 | (breva) local_addres=130.75.105.98; local_host=lcmuk;; |
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213 | (caurus) local_addres=130.75.105.19; local_host=lcmuk;; |
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214 | (climate*) local_addres=165.132.26.68; local_host=lcyon;; |
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215 | (compute-*.local) local_addres=172.20.4.2; local_host=lcfimm;; |
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216 | (cs*) local_addres=136.172.44.131; local_host=nech;; |
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217 | (elephanta) local_addres=130.75.105.6; local_host=lcmuk;; |
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218 | (fimm.bccs.uib.no) local_addres=172.20.4.2; local_host=lcfimm;; |
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219 | (node*) local_addres=165.132.26.61 local_host=lck;; |
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220 | # (node*) local_addres=210.219.61.8 local_host=lckordi;; |
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221 | (gaia*) local_addres=150.183.146.24; local_host=ibmkisti;; |
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222 | (gallego) local_addres=130.75.105.10; local_host=lcmuk;; |
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223 | (gfdl5) local_addres=165.132.26.58; local_host=ibmy;; |
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224 | (gfdl3.yonsei.ac.kr) local_addres=165.132.26.56; local_host=decalpha;; |
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225 | (gregale) local_addres=130.75.105.109; local_host=lcmuk;; |
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226 | (hababai) local_addres=130.75.105.108; local_host=lcmuk;; |
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227 | (hexagon.bccs.uib.no) local_addres=129.177.20.113; local_host=lcxt4;; |
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228 | (hd1) local_addres=130.75.4.104; local_host=lcsgih;; |
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229 | (hd2) local_addres=130.75.4.105; local_host=lcsgih;; |
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230 | (hd3) local_addres=130.75.4.106; local_host=lcsgih;; |
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231 | (hd4) local_addres=130.75.4.107; local_host=lcsgih;; |
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232 | (hicegate0) local_addres=130.75.4.101; local_host=lcsgih;; |
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233 | (h01*|hicegate1) local_addres=130.75.4.102; local_host=lcsgih;; |
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234 | (hicegate2) local_addres=130.75.4.103; local_host=lcsgih;; |
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235 | (hx*) local_addres=133.3.51.11; local_host=lckyoto;; |
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236 | (inferno) local_addres=130.75.105.5; local_host=lcmuk;; |
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237 | (irifi) local_addres=130.75.105.104; local_host=lcmuk;; |
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238 | (sno) local_addres=130.75.105.113; local_host=lcmuk;; |
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239 | (levanto) local_addres=130.75.105.45; local_host=lcmuk;; |
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240 | (maestro) local_addres=130.75.105.2; local_host=lcmuk;; |
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241 | (meteo-login*) local_addres=193.166.211.144;local_host=lcxt5m;; |
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242 | (nid*) local_addres=129.177.20.113; local_host=lcxt4;; |
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243 | (nobel*) local_addres=150.183.5.101; local_host=ibms;; |
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244 | (orkan) local_addres=130.75.105.3; local_host=lcmuk;; |
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245 | (ostria) local_addres=130.75.105.106; local_host=lcmuk;; |
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246 | (paesano) local_addres=130.75.105.46; local_host=lcmuk;; |
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247 | (quanero) local_addres=130.75.105.107; local_host=lcmuk;; |
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248 | (rte*) local_addres=133.5.185.60; local_host=lcrte;; |
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249 | (scirocco) local_addres=172.20.25.41; local_host=lcmuk;; |
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250 | (sun1|sun2) local_addres=130.75.6.1; local_host=unics;; |
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251 | (sx-*) local_addres=172.16.1.131; local_host=necriam;; |
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252 | (r1*) local_addres=130.75.4.102; local_host=lcsgih;; |
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253 | (r2*) local_addres=130.73.232.102; local_host=lcsgib;; |
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254 | (t2a*) local_addres=10.1.6.165; local_host=lctit;; |
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255 | (vorias) local_addres=172.20.25.43; local_host=lcmuk;; |
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256 | (*.cc.kyushu-u.ac.jp) local_addres=133.5.4.129; local_host=ibmku;; |
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257 | (*) printf "\n +++ \"$local_host\" unknown"; |
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258 | printf "\n please inform S. Raasch!"; |
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259 | locat=parameter; exit;; |
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260 | esac |
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261 | |
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262 | |
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263 | |
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264 | # REMOTE HOST DEFAULTMAESSIG = LOCAL HOST SETZEN |
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265 | remote_host=$local_host |
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266 | |
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267 | |
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268 | |
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269 | |
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270 | # PROZEDUROPTIONEN EINLESEN |
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271 | while getopts :c:dDe:g:h:m:n:N:O:q:t:T:u:vX: option |
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272 | do |
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273 | case $option in |
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274 | (c) job_catalog=$OPTARG;; |
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275 | (d) delete_dayfile=true;; |
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276 | (D) no_submit=true;; |
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277 | (e) email_notification=$OPTARG;; |
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278 | (g) group_number=$OPTARG;; |
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279 | (h) remote_host=$OPTARG;; |
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280 | (m) memory=$OPTARG;; |
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281 | (n) job_name=$OPTARG;; |
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282 | (N) node_usage=$OPTARG;; |
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283 | (O) threads_per_task=$OPTARG;; |
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284 | (q) no_default_queue=$OPTARG;; |
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285 | (t) cputime=$OPTARG;; |
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286 | (T) tasks_per_node=$OPTARG;; |
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287 | (u) remote_user=$OPTARG;; |
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288 | (v) verify=false;; |
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289 | (X) numprocs=$OPTARG;; |
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290 | (\?) printf "\n +++ Option $OPTARG unknown \n"; |
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291 | locat=option; exit;; |
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292 | esac |
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293 | done |
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294 | |
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295 | |
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296 | # JOBDATEINAMEN ALS NAECHSTES ARGUMENT HOLEN |
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297 | shift OPTIND-1; file_to_send=$1 |
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298 | |
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299 | |
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300 | # KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN |
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301 | if [ "$1" = "?" ] |
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302 | then |
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303 | (printf "\n *** subjob can be called as follows:\n" |
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304 | printf "\n subjob -c.. -d -D -h.. -m.. -q.. -t.. -u.. -v <jobfile>\n" |
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305 | printf "\n Description of available options:\n" |
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306 | printf "\n Option Description Default-Value" |
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307 | printf "\n -c job-input- and output-catalog ~/job_queue" |
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308 | printf "\n -d no job-protocol will be created ---" |
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309 | printf "\n -D only the job-file will be created ---" |
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310 | printf "\n -h execution host, available hosts: $remote_host" |
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311 | printf "\n ibm, ibmh, ibmkisti, ibmku, ibms, ibmy, lc...," |
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312 | printf "\n lctit, nech, necriam, unics" |
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313 | printf "\n -m memory demand per process in MByte ---" |
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314 | printf "\n -n jobname <jobdatei>" |
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315 | printf "\n -O threads per task (for OpenMP usage) 1" |
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316 | printf "\n -q job-queue to be used default" |
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317 | printf "\n -t allowed cpu-time in seconds ---" |
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318 | printf "\n -T tasks per node (on parallel hosts) ---" |
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319 | printf "\n -u username on execution host from .netrc" |
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320 | printf "\n -v no prompt for confirmation ---" |
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321 | printf "\n -X # of processors (on parallel hosts) 1" |
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322 | printf "\n " |
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323 | printf "\n The only possible positional parameter is <jobfile>:" |
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324 | printf "\n The complete NQS-job must be provided here." |
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325 | printf "\n <jobfile>=? creates this outline\n\n") | more |
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326 | exit |
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327 | fi |
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328 | |
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329 | |
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330 | |
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331 | # PRUEFEN, OB JOBDATEI ANGEGEBEN WURDE UND OB SIE AUCH EXISTIERT |
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332 | if [[ "$file_to_send" = "" ]] |
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333 | then |
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334 | printf "\n +++ job-file missing" |
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335 | locat=parameter; exit |
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336 | else |
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337 | if [[ -f $file_to_send ]] |
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338 | then |
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339 | true |
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340 | else |
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341 | printf "\n +++ job-file: " |
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342 | printf "\n $file_to_send" |
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343 | printf "\n does not exist" |
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344 | locat=parameter; exit |
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345 | fi |
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346 | fi |
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347 | |
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348 | |
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349 | |
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350 | # FALLS KEIN JOBNAME ANGEGEBEN WURDE, WIRD JOBNAME = JOBDATEINAME |
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351 | # GESETZT. VORAUSSETZUNG: JOBDATEINAME BEINHALTET KEINE PFADE |
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352 | if [[ $job_name = none ]] |
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353 | then |
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354 | job_name=$file_to_send |
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355 | fi |
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356 | if [[ $(echo $job_name | grep -c "/") != 0 ]] |
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357 | then |
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358 | printf "\n +++ job-file name: " |
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359 | printf "\n $job_name" |
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360 | printf "\n must not contain \"/\"-characters" |
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361 | locat=parameter; exit |
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362 | fi |
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363 | |
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364 | |
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365 | |
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366 | |
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367 | # HOSTSPEZIFISCHE GROESSEN VEREINBAREN BZW. ABBRUCH BEI UNZULAESSIGEM HOST |
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368 | # ODER WENN HOST NICHT ANGEGEBEN WURDE |
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369 | if [[ $remote_host = none ]] |
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370 | then |
---|
371 | printf "\n +++ host missing" |
---|
372 | locat=option; exit |
---|
373 | else |
---|
374 | case $remote_host in |
---|
375 | (ibm) queue=p690_standard; remote_addres=134.76.99.81; submcom=/usr/lpp/LoadL/full/bin/llsubmit;; |
---|
376 | (ibmh) queue=no_class; remote_addres=136.172.40.15; submcom=/usr/lpp/LoadL/full/bin/llsubmit;; |
---|
377 | (ibmkisti) queue=class.32plus; remote_addres=150.183.146.24; submcom=/usr/lpp/LoadL/full/bin/llsubmit;; |
---|
378 | (ibmku) queue=s4; remote_addres=133.5.4.129; submcom=/usr/local/bin/llsubmit;; |
---|
379 | (ibms) queue=p_normal; remote_addres=150.183.5.101; submcom=/usr/lpp/LoadL/full/bin/llsubmit;; |
---|
380 | (ibmy) queue=parallel; remote_addres=165.132.26.58; submcom=/usr/lpp/LoadL/full/bin/llsubmit;; |
---|
381 | (lcfimm) remote_addres=172.20.4.2; submcom=/opt/torque/bin/qsub;; |
---|
382 | (lckyoto) remote_addres=133.3.51.11; submcom=/thin/local/bin/qsub;; |
---|
383 | (lcsgib) queue=smallq; remote_addres=130.73.232.104; submcom=/opt/moab/bin/msub;; |
---|
384 | (lcsgih) queue=smallq; remote_addres=130.75.4.101; submcom=/opt/moab/bin/msub;; |
---|
385 | (lck) remote_addres=165.132.26.61; submcom=/usr/torque/bin/qsub;; |
---|
386 | (lckordi) remote_addres=210.219.61.8; submcom=/usr/torque/bin/qsub;; |
---|
387 | (lctit) queue=S; remote_addres=10.1.6.165; submcom=/opt/pbs/tools/bin/t2sub;; |
---|
388 | (lcxt4) remote_addres=129.177.20.113; submcom=/opt/torque/2.4.9-snap.201005191035/bin/qsub;; |
---|
389 | (lcxt5m) remote_addres=193.166.211.144; submcom=/opt/pbs/10.1.0.91350/bin/qsub;; |
---|
390 | (lcyon) remote_addres=165.132.26.68; submcom=/usr/torque/bin/qsub;; |
---|
391 | (nech) qsubmem=memsz_job; qsubtime=cputim_job; remote_addres=136.172.44.147; submcom="/usr/local/bin/qsub";; |
---|
392 | (necriam) qsubmem=memsz_job; qsubtime=cputim_job; remote_addres=172.16.1.131; submcom="/usr/bin/nqsII/qsub";; |
---|
393 | (vpp) qsubmem=m; qsubtime=t; queue=vpp; remote_addres=130.75.4.130;; |
---|
394 | (unics) qsubmem=d; qsubtime=t; queue=unics; remote_addres=130.75.6.1;; |
---|
395 | (*) printf "\n +++ hostname \"$remote_host\" not allowed"; |
---|
396 | locat=parameter; exit;; |
---|
397 | esac |
---|
398 | fi |
---|
399 | |
---|
400 | |
---|
401 | # EVTL. PRUEFEN, OB ANGEGEBENE QUEUE ZULAESSIG IST |
---|
402 | if [[ $no_default_queue != none ]] |
---|
403 | then |
---|
404 | error=false |
---|
405 | ndq=$no_default_queue |
---|
406 | case $remote_host in |
---|
407 | (ibm) case $ndq in |
---|
408 | (p690_express|p690_standard|p690_long) error=false;; |
---|
409 | (*) error=true;; |
---|
410 | esac;; |
---|
411 | (ibmh) case $ndq in |
---|
412 | (no_class) error=false;; |
---|
413 | (*) error=true;; |
---|
414 | esac;; |
---|
415 | (ibmkisti) case $ndq in |
---|
416 | (class.32plus|class.1-2|class.2-32) error=false;; |
---|
417 | (*) error=true;; |
---|
418 | esac;; |
---|
419 | (ibmku) case $ndq in |
---|
420 | (sdbg1|sdbg2|sdbg4|s4|s16|s32|s32-s) error=false;; |
---|
421 | (*) error=true;; |
---|
422 | esac;; |
---|
423 | (ibms) case $ndq in |
---|
424 | (express|normal|p_express|p_normal|p_normal_1.3|p_normal_1.7|grand) error=false;; |
---|
425 | (*) error=true;; |
---|
426 | esac;; |
---|
427 | (ibmy) case $ndq in |
---|
428 | (parallel) error=false;; |
---|
429 | (*) error=true;; |
---|
430 | esac;; |
---|
431 | (lckyoto) case $ndq in |
---|
432 | (eh|ph) error=false;; |
---|
433 | (*) error=true;; |
---|
434 | esac;; |
---|
435 | (lcsgib|lcsgih) case $ndq in |
---|
436 | (testq|serialq|smallq|mediumq|bigq|workq|dataq|permq|special1q) error=false;; |
---|
437 | (*) error=true;; |
---|
438 | esac;; |
---|
439 | (lctit) case $ndq in |
---|
440 | (G|L128|L256|L512H|S|S96|V) error=false;; |
---|
441 | (*) error=true;; |
---|
442 | esac;; |
---|
443 | (t3eb) case $ndq in |
---|
444 | (berte|p50|p100|p392|forfree|p25himem) error=false;; |
---|
445 | (*) error=true;; |
---|
446 | esac;; |
---|
447 | (necriam) case $ndq in |
---|
448 | (SP|SS|P6) error=false;; |
---|
449 | (*) error=true;; |
---|
450 | esac;; |
---|
451 | (t3eh) case $ndq in |
---|
452 | (para_t3e|em|k|l|lm|comp_t3e|c|p|ht) error=false;; |
---|
453 | (*) error=true;; |
---|
454 | esac;; |
---|
455 | (t3ej2|t3ej5) case $ndq in |
---|
456 | (low|normal|high) error=false;; |
---|
457 | (*) error=true;; |
---|
458 | esac;; |
---|
459 | (t3es) case $ndq in |
---|
460 | (batch|serial-4|pe4|p48|pe16|pe32|pe64|pe128) error=false;; |
---|
461 | (*) error=true;; |
---|
462 | esac;; |
---|
463 | (unics) case $ndq in |
---|
464 | (unics|ht) error=false;; |
---|
465 | (*) error=true;; |
---|
466 | esac;; |
---|
467 | esac |
---|
468 | if [[ $error = true ]] |
---|
469 | then |
---|
470 | printf "\n +++ queue \"$no_default_queue\" on host \"$remote_host\" not allowed" |
---|
471 | locat=parameter; exit |
---|
472 | else |
---|
473 | queue=$no_default_queue |
---|
474 | fi |
---|
475 | fi |
---|
476 | |
---|
477 | |
---|
478 | |
---|
479 | # PRUEFEN DER CPU-ZEIT, ZEIT NACH STUNDEN, MINUTEN UND SEKUNDEN |
---|
480 | # AUFTEILEN |
---|
481 | done=false |
---|
482 | while [[ $done = false ]] |
---|
483 | do |
---|
484 | if (( $cputime <= 0 )) |
---|
485 | then |
---|
486 | printf "\n +++ wrong cpu-time or cpu-time missing" |
---|
487 | printf "\n >>> Please type cpu-time in seconds as INTEGER:" |
---|
488 | printf "\n >>> " |
---|
489 | read cputime 1>/dev/null 2>&1 |
---|
490 | else |
---|
491 | done=true |
---|
492 | fi |
---|
493 | done |
---|
494 | if [[ $remote_host = nech ]] |
---|
495 | then |
---|
496 | if (( tasks_per_node != 0 )) |
---|
497 | then |
---|
498 | (( cputime = cputime * tasks_per_node )) |
---|
499 | elif [[ $numprocs != 0 ]] |
---|
500 | then |
---|
501 | (( cputime = cputime * numprocs )) |
---|
502 | fi |
---|
503 | fi |
---|
504 | (( stunden = cputime / 3600 )) |
---|
505 | (( resttime = cputime - stunden * 3600 )) |
---|
506 | (( minuten = resttime / 60 )) |
---|
507 | (( sekunden = resttime - minuten * 60 )) |
---|
508 | timestring=${stunden}:${minuten}:${sekunden} |
---|
509 | |
---|
510 | |
---|
511 | |
---|
512 | # PRUEFEN DER KERNSPEICHERANFORDERUNG |
---|
513 | done=false |
---|
514 | while [[ $done = false ]] |
---|
515 | do |
---|
516 | if (( memory <= 0 )) |
---|
517 | then |
---|
518 | printf "\n +++ wrong memory demand or memory demand missing" |
---|
519 | printf "\n >>> Please type memory in MByte per process as INTEGER:" |
---|
520 | printf "\n >>> " |
---|
521 | read memory 1>/dev/null 2>&1 |
---|
522 | else |
---|
523 | done=true |
---|
524 | fi |
---|
525 | done |
---|
526 | |
---|
527 | if [[ $remote_host = nech || $remote_host = necriam ]] |
---|
528 | then |
---|
529 | if (( tasks_per_node != 0 )) |
---|
530 | then |
---|
531 | (( Memory = memory * tasks_per_node / 1000 )) |
---|
532 | elif [[ $numprocs != 0 ]] |
---|
533 | then |
---|
534 | (( Memory = memory * numprocs / 1000 )) |
---|
535 | else |
---|
536 | (( Memory = memory / 1000 )) |
---|
537 | fi |
---|
538 | elif [[ $remote_host = lctit ]] |
---|
539 | then |
---|
540 | (( Memory = memory * tasks_per_node / 1000 )) |
---|
541 | fi |
---|
542 | |
---|
543 | |
---|
544 | # SPEICHERBERECHNUNG BEI OPENMP-NUTZUNG |
---|
545 | if [[ $(echo $remote_host | cut -c1-3) = ibm ]] |
---|
546 | then |
---|
547 | (( memory = memory * threads_per_task )) |
---|
548 | fi |
---|
549 | |
---|
550 | |
---|
551 | # BERECHNUNG DER ANZAHL DER ZU VERWENDENDEN KNOTEN |
---|
552 | if (( tasks_per_node != 0 )) |
---|
553 | then |
---|
554 | (( nodes = numprocs / ( tasks_per_node * threads_per_task ) )) |
---|
555 | fi |
---|
556 | |
---|
557 | # Calculate number of processes per node |
---|
558 | (( processes_per_node = tasks_per_node * threads_per_task )) |
---|
559 | |
---|
560 | # Calculate number of MPI tasks |
---|
561 | (( mpi_tasks = numprocs / threads_per_task )) |
---|
562 | |
---|
563 | |
---|
564 | # HEADER-AUSGABE |
---|
565 | if [[ $verify = true ]] |
---|
566 | then |
---|
567 | printf "\n\n" |
---|
568 | printf "#--------------------------------------------------------------# \n" |
---|
569 | spalte1=SUBJOB;spalte2=$(date) |
---|
570 | printf "| $spalte1$spalte2 | \n" |
---|
571 | printf "| | \n" |
---|
572 | printf "| values of parameters/options: | \n" |
---|
573 | spalte1=local_host$punkte; spalte2=$punkte$local_host |
---|
574 | printf "| $spalte1$spalte2 | \n" |
---|
575 | spalte1=remote_host$punkte; spalte2=$punkte$remote_host |
---|
576 | printf "| $spalte1$spalte2 | \n" |
---|
577 | spalte1=queue$punkte; spalte2=$punkte$queue |
---|
578 | printf "| $spalte1$spalte2 | \n" |
---|
579 | spalte1=memory$punkte; spalte2="$punkte$memory mb" |
---|
580 | printf "| $spalte1$spalte2 | \n" |
---|
581 | spalte1=cputime$punkte; spalte2="$punkte$cputime sec" |
---|
582 | printf "| $spalte1$spalte2 | \n" |
---|
583 | spalte1=job_name$punkte; spalte2="$punkte$job_name" |
---|
584 | printf "| $spalte1$spalte2 | \n" |
---|
585 | printf "#--------------------------------------------------------------# \n\n" |
---|
586 | |
---|
587 | |
---|
588 | # KONTROLLABFRAGE, OB ALLES O.K. |
---|
589 | antwort="dummy" |
---|
590 | while [[ $antwort != y && $antwort != Y && $antwort != n && $antwort != N ]] |
---|
591 | do |
---|
592 | read antwort?" >>> continue (y/n) ? " |
---|
593 | done |
---|
594 | if [[ $antwort = n || $antwort = N ]] |
---|
595 | then |
---|
596 | locat=verify; exit |
---|
597 | fi |
---|
598 | printf "\n" |
---|
599 | fi |
---|
600 | |
---|
601 | |
---|
602 | |
---|
603 | # ZUFALLSKENNUNG GENERIEREN UND JOBNAMEN AUF ZIELRECHNER BESTIMMEN |
---|
604 | kennung=$RANDOM |
---|
605 | job_on_remhost=${job_name}_${kennung}_$local_host |
---|
606 | job_to_send=job_to_send_$kennung |
---|
607 | if [[ $delete_dayfile = false ]] |
---|
608 | then |
---|
609 | remote_dayfile=${local_host}_${job_name}_result_$kennung |
---|
610 | local_dayfile=${remote_host}_${job_name} |
---|
611 | else |
---|
612 | remote_dayfile=/dev/null |
---|
613 | fi |
---|
614 | |
---|
615 | |
---|
616 | |
---|
617 | # Generate the batch job scripts (qsub/msub/LoadLeveler) |
---|
618 | if [[ $(echo $remote_host | cut -c1-3) = ibm && $numprocs != 0 ]] |
---|
619 | then |
---|
620 | |
---|
621 | # General LoadLeveler settings |
---|
622 | execute_in_shell="#!/bin/ksh" |
---|
623 | use_shell="# @ shell = /bin/ksh" |
---|
624 | consumable_memory="ConsumableMemory($memory mb)" |
---|
625 | class="# @ class = $queue" |
---|
626 | environment="# @ environment = OMP_NUM_THREADS=$threads_per_task; MP_SHARED_MEMORY=yes" |
---|
627 | network_to_use="# @ network.mpi = sn_all,shared,us" |
---|
628 | data_limit="# @ data_limit = 1.76gb" |
---|
629 | image_size="# @ image_size = 50" |
---|
630 | wall_clock_limit="# @ wall_clock_limit = ${timestring},$timestring" |
---|
631 | |
---|
632 | if [[ $email_notification = none ]] |
---|
633 | then |
---|
634 | notify_user="" |
---|
635 | else |
---|
636 | notify_user="# @ notify_user = $email_notification" |
---|
637 | if [[ $delete_dayfile = true ]] |
---|
638 | then |
---|
639 | notification='# @ notification = never' |
---|
640 | fi |
---|
641 | fi |
---|
642 | |
---|
643 | if [[ $remote_host = ibmh ]] |
---|
644 | then |
---|
645 | data_limit="" |
---|
646 | network_to_use="" |
---|
647 | class="" |
---|
648 | environment="" |
---|
649 | elif [[ $remote_host = ibmkisti ]] |
---|
650 | then |
---|
651 | network_to_use="# @ network.MPI = sn_all,shared,US" |
---|
652 | wall_clock_limit="# @ wall_clock_limit = $timestring" |
---|
653 | if [[ $threads_per_task = 1 ]] |
---|
654 | then |
---|
655 | rset="# @ rset = RSET_MCM_AFFINITY" |
---|
656 | mcm_affinity_options="# @ mcm_affinity_options = mcm_mem_pref mcm_sni_none mcm_distribute" |
---|
657 | fi |
---|
658 | environment="" |
---|
659 | use_shell="" |
---|
660 | data_limit="" |
---|
661 | image_size="" |
---|
662 | elif [[ $remote_host = ibmku ]] |
---|
663 | then |
---|
664 | execute_in_shell="#!/usr/bin/ksh" |
---|
665 | use_shell="# @ shell = /usr/bin/ksh" |
---|
666 | consumable_memory="" |
---|
667 | environment="" |
---|
668 | network_to_use="# @ network.mpi = sn_all,shared,us" |
---|
669 | data_limit="" |
---|
670 | image_size="" |
---|
671 | elif [[ $remote_host = ibms ]] |
---|
672 | then |
---|
673 | network_to_use="# @ network.mpi = csss,shared,us" |
---|
674 | elif [[ $remote_host = ibmy ]] |
---|
675 | then |
---|
676 | consumable_memory="" |
---|
677 | network_to_use="" |
---|
678 | fi |
---|
679 | |
---|
680 | cat > $job_to_send << %%END%% |
---|
681 | $execute_in_shell |
---|
682 | $use_shell |
---|
683 | |
---|
684 | # @ job_type = parallel |
---|
685 | # @ job_name = $job_name |
---|
686 | # @ resources = ConsumableCpus($threads_per_task) $consumable_memory |
---|
687 | # @ output = $remote_dayfile |
---|
688 | # @ error = $remote_dayfile |
---|
689 | $wall_clock_limit |
---|
690 | $image_size |
---|
691 | $class |
---|
692 | $environment |
---|
693 | $network_to_use |
---|
694 | $data_limit |
---|
695 | $rset |
---|
696 | $mcm_affinity_options |
---|
697 | $notification |
---|
698 | $notify_user |
---|
699 | |
---|
700 | %%END%% |
---|
701 | |
---|
702 | if (( nodes > 0 )) |
---|
703 | then |
---|
704 | |
---|
705 | if [[ $remote_host != ibmkisti ]] |
---|
706 | then |
---|
707 | |
---|
708 | cat >> $job_to_send << %%END%% |
---|
709 | # @ node = $nodes |
---|
710 | # @ tasks_per_node = $processes_per_node |
---|
711 | # @ node_usage = $node_usage |
---|
712 | # @ queue |
---|
713 | |
---|
714 | %%END%% |
---|
715 | |
---|
716 | else |
---|
717 | |
---|
718 | cat >> $job_to_send << %%END%% |
---|
719 | # @ total_tasks = $mpi_tasks |
---|
720 | # @ blocking = unlimited |
---|
721 | # @ queue |
---|
722 | |
---|
723 | %%END%% |
---|
724 | |
---|
725 | fi |
---|
726 | |
---|
727 | else |
---|
728 | |
---|
729 | if [[ $remote_host != ibmy ]] |
---|
730 | then |
---|
731 | |
---|
732 | cat >> $job_to_send << %%END%% |
---|
733 | # @ blocking = unlimited |
---|
734 | # @ total_tasks = $numprocs |
---|
735 | # @ node_usage = $node_usage |
---|
736 | # @ queue |
---|
737 | |
---|
738 | %%END%% |
---|
739 | |
---|
740 | else |
---|
741 | |
---|
742 | cat >> $job_to_send << %%END%% |
---|
743 | # @ node = 1 |
---|
744 | # @ total_tasks = $numprocs |
---|
745 | # @ queue |
---|
746 | |
---|
747 | %%END%% |
---|
748 | |
---|
749 | fi |
---|
750 | |
---|
751 | fi |
---|
752 | |
---|
753 | # workaround because of silly job filter on ibmkisti |
---|
754 | if [[ $remote_host = ibmkisti && $threads_per_task != 1 ]] |
---|
755 | then |
---|
756 | echo "export OMP_NUM_THREADS=$threads_per_task" >> $job_to_send |
---|
757 | fi |
---|
758 | |
---|
759 | elif [[ $(echo $remote_host | cut -c1-3) = ibm && $numprocs = 0 ]] |
---|
760 | then |
---|
761 | |
---|
762 | cat > $job_to_send << %%END%% |
---|
763 | #!/bin/ksh |
---|
764 | |
---|
765 | # @ job_type = serial |
---|
766 | # @ node_usage = $node_usage |
---|
767 | # @ job_name = palm |
---|
768 | # @ wall_clock_limit = ${timestring},$timestring |
---|
769 | # @ resources = ConsumableCpus(1) ConsumableMemory(1 gb) |
---|
770 | # @ output = $remote_dayfile |
---|
771 | # @ error = $remote_dayfile |
---|
772 | $class |
---|
773 | $notification |
---|
774 | |
---|
775 | # @ queue |
---|
776 | |
---|
777 | %%END%% |
---|
778 | |
---|
779 | elif [[ $remote_host = lcfimm ]] |
---|
780 | then |
---|
781 | |
---|
782 | if [[ $numprocs != 0 ]] |
---|
783 | then |
---|
784 | cat > $job_to_send << %%END%% |
---|
785 | #!/bin/ksh |
---|
786 | #PBS -N $job_name |
---|
787 | #PBS -A $project_account |
---|
788 | #PBS -l walltime=$timestring |
---|
789 | #PBS -l nodes=${nodes}:ppn=$processes_per_node |
---|
790 | #PBS -l pmem=${memory}mb |
---|
791 | #PBS -m abe |
---|
792 | #PBS -o $remote_dayfile |
---|
793 | #PBS -j oe |
---|
794 | mpd & |
---|
795 | |
---|
796 | %%END%% |
---|
797 | |
---|
798 | else |
---|
799 | cat > $job_to_send << %%END%% |
---|
800 | #!/bin/ksh |
---|
801 | #PBS -N $job_name |
---|
802 | #PBS -A $project_account |
---|
803 | #PBS -l walltime=$timestring |
---|
804 | #PBS -l ncpus=1 |
---|
805 | #PBS -l pmem=${memory}mb |
---|
806 | #PBS -m abe |
---|
807 | #PBS -o $remote_dayfile |
---|
808 | #PBS -j oe |
---|
809 | |
---|
810 | %%END%% |
---|
811 | |
---|
812 | fi |
---|
813 | |
---|
814 | elif [[ $remote_host = lck || $remote_host = lckordi ]] |
---|
815 | then |
---|
816 | |
---|
817 | if [[ $numprocs != 0 ]] |
---|
818 | then |
---|
819 | cat > $job_to_send << %%END%% |
---|
820 | #!/bin/ksh |
---|
821 | #PBS -N $job_name |
---|
822 | #PBS -l walltime=$timestring |
---|
823 | #PBS -l ncpus=$numprocs |
---|
824 | #PBS -l pmem=${memory}mb |
---|
825 | #PBS -o $remote_dayfile |
---|
826 | #PBS -j oe |
---|
827 | |
---|
828 | mpd & |
---|
829 | |
---|
830 | %%END%% |
---|
831 | |
---|
832 | else |
---|
833 | cat > $job_to_send << %%END%% |
---|
834 | #!/bin/ksh |
---|
835 | #PBS -N $job_name |
---|
836 | #PBS -l walltime=$timestring |
---|
837 | #PBS -l ncpus=1 |
---|
838 | #PBS -l pmem=${memory}mb |
---|
839 | #PBS -o $remote_dayfile |
---|
840 | #PBS -j oe |
---|
841 | |
---|
842 | %%END%% |
---|
843 | |
---|
844 | fi |
---|
845 | |
---|
846 | elif [[ $remote_host = lcyon ]] |
---|
847 | then |
---|
848 | |
---|
849 | if [[ $numprocs != 0 ]] |
---|
850 | then |
---|
851 | cat > $job_to_send << %%END%% |
---|
852 | #!/bin/ksh |
---|
853 | #PBS -N $job_name |
---|
854 | #PBS -l walltime=$timestring |
---|
855 | #PBS -l ncpus=$numprocs |
---|
856 | #PBS -l pmem=${memory}mb |
---|
857 | #PBS -o $remote_dayfile |
---|
858 | #PBS -j oe |
---|
859 | |
---|
860 | %%END%% |
---|
861 | |
---|
862 | else |
---|
863 | cat > $job_to_send << %%END%% |
---|
864 | #!/bin/ksh |
---|
865 | #PBS -N $job_name |
---|
866 | #PBS -l walltime=$timestring |
---|
867 | #PBS -l ncpus=1 |
---|
868 | #PBS -l pmem=${memory}mb |
---|
869 | #PBS -o $remote_dayfile |
---|
870 | #PBS -j oe |
---|
871 | |
---|
872 | %%END%% |
---|
873 | |
---|
874 | fi |
---|
875 | |
---|
876 | elif [[ $remote_host = lcsgih || $remote_host = lcsgib ]] |
---|
877 | then |
---|
878 | |
---|
879 | if [[ "$sgi_feature" != "" ]] |
---|
880 | then |
---|
881 | feature_directive="#PBS -l feature=$sgi_feature" |
---|
882 | else |
---|
883 | feature_directive="" |
---|
884 | fi |
---|
885 | |
---|
886 | if [[ $queue = dataq || $queue = permq ]] |
---|
887 | then |
---|
888 | feature_directive="#PBS -l feature=data" |
---|
889 | fi |
---|
890 | |
---|
891 | if [[ $queue = testq || $queue = workq || $queue = dataq || $queue = permq || $queue = serialq || $queue = special1q ]] |
---|
892 | then |
---|
893 | queue_directive="#PBS -q $queue" |
---|
894 | else |
---|
895 | queue_directive="" |
---|
896 | fi |
---|
897 | |
---|
898 | if [[ $email_notification = none ]] |
---|
899 | then |
---|
900 | email_directive="" |
---|
901 | else |
---|
902 | email_directive="#PBS -M $email_notification" |
---|
903 | fi |
---|
904 | |
---|
905 | if [[ $numprocs != 0 ]] |
---|
906 | then |
---|
907 | cat > $job_to_send << %%END%% |
---|
908 | #!/bin/bash |
---|
909 | #PBS -N $job_name |
---|
910 | #PBS -l walltime=$timestring |
---|
911 | #PBS -l nodes=$nodes:ppn=${processes_per_node} |
---|
912 | #PBS -l naccesspolicy=$node_usage |
---|
913 | #PBS -o $remote_dayfile |
---|
914 | #PBS -j oe |
---|
915 | $feature_directive |
---|
916 | $queue_directive |
---|
917 | $email_directive |
---|
918 | |
---|
919 | eval \`/sw/swdist/bin/modulesinit\` |
---|
920 | #. /usr/share/modules/init/bash |
---|
921 | $module_calls |
---|
922 | |
---|
923 | echo ld_library_path=\$LD_LIBRARY_PATH |
---|
924 | |
---|
925 | %%END%% |
---|
926 | |
---|
927 | else |
---|
928 | cat > $job_to_send << %%END%% |
---|
929 | #PBS -S /bin/bash |
---|
930 | #PBS -N $job_name |
---|
931 | #PBS -l walltime=$timestring |
---|
932 | #PBS -l ncpus=1 |
---|
933 | #PBS -o $remote_dayfile |
---|
934 | #PBS -j oe |
---|
935 | $queue_directive |
---|
936 | $email_directive |
---|
937 | |
---|
938 | eval \`/sw/swdist/bin/modulesinit\` |
---|
939 | #. /usr/share/modules/init/bash |
---|
940 | $module_calls |
---|
941 | |
---|
942 | %%END%% |
---|
943 | |
---|
944 | fi |
---|
945 | |
---|
946 | elif [[ $remote_host = lcxt4 ]] |
---|
947 | then |
---|
948 | |
---|
949 | if [[ $numprocs != 0 ]] |
---|
950 | then |
---|
951 | cat > $job_to_send << %%END%% |
---|
952 | #!/bin/ksh |
---|
953 | #PBS -S /bin/ksh |
---|
954 | #PBS -N $job_name |
---|
955 | #PBS -A $project_account |
---|
956 | #PBS -j oe |
---|
957 | #PBS -l walltime=$timestring |
---|
958 | #PBS -l mppwidth=${numprocs} |
---|
959 | #PBS -l mppnppn=${processes_per_node} |
---|
960 | #PBS -m abe |
---|
961 | #PBS -o $remote_dayfile |
---|
962 | $email_directive |
---|
963 | |
---|
964 | . /opt/modules/default/init/ksh |
---|
965 | $module_calls |
---|
966 | |
---|
967 | %%END%% |
---|
968 | |
---|
969 | else |
---|
970 | cat > $job_to_send << %%END%% |
---|
971 | #!/bin/ksh |
---|
972 | #PBS -S /bin/ksh |
---|
973 | #PBS -N $job_name |
---|
974 | #PBS -A $project_account |
---|
975 | #PBS -j oe |
---|
976 | #PBS -l walltime=$timestring |
---|
977 | #PBS -l ncpus=1 |
---|
978 | #PBS -l pmem=${memory}mb |
---|
979 | #PBS -m abe |
---|
980 | $email_directive |
---|
981 | #PBS -o $remote_dayfile |
---|
982 | |
---|
983 | . /opt/modules/default/init/ksh |
---|
984 | $module_calls |
---|
985 | |
---|
986 | %%END%% |
---|
987 | |
---|
988 | fi |
---|
989 | |
---|
990 | elif [[ $remote_host = lckyoto ]] |
---|
991 | then |
---|
992 | |
---|
993 | cat > $job_to_send << %%END%% |
---|
994 | #!/bin/ksh |
---|
995 | # @\$-o $remote_dayfile |
---|
996 | # @\$-eo -oi |
---|
997 | # @\$-lP 16 |
---|
998 | # @\$-lp 1 |
---|
999 | # @\$-lm 28gb -llm unlimited -ls unlimited |
---|
1000 | # @\$-q $queue |
---|
1001 | # @\$-Pvn abs_pack |
---|
1002 | ##for intel? @\$-Pvn abs_unpack -Pvs unpack -Pvc unpack |
---|
1003 | #. /thin/local/etc/setprofile/intel-11.0.sh |
---|
1004 | #. /thin/local/etc/setprofile/mvapich2-1.4+intel-11.0.sh |
---|
1005 | . ~/.myprofile |
---|
1006 | #. /home2/t/t51254/palm/current_version/myprofile |
---|
1007 | #. /thin/apps/pgi/mpi.sh |
---|
1008 | # |
---|
1009 | env |
---|
1010 | # |
---|
1011 | set -x |
---|
1012 | |
---|
1013 | %%END%% |
---|
1014 | |
---|
1015 | elif [[ $remote_host = lcxt5m ]] |
---|
1016 | then |
---|
1017 | |
---|
1018 | if [[ $numprocs != 0 ]] |
---|
1019 | then |
---|
1020 | cat > $job_to_send << %%END%% |
---|
1021 | #!/bin/ksh |
---|
1022 | #PBS -S /bin/ksh |
---|
1023 | #PBS -N $job_name |
---|
1024 | #PBS -j oe |
---|
1025 | #PBS -l walltime=$timestring |
---|
1026 | #PBS -l mppwidth=${numprocs} |
---|
1027 | #PBS -l mppnppn=${processes_per_node} |
---|
1028 | #PBS -m abe |
---|
1029 | #PBS -o $remote_dayfile |
---|
1030 | |
---|
1031 | . /opt/modules/default/init/ksh |
---|
1032 | $module_calls |
---|
1033 | |
---|
1034 | %%END%% |
---|
1035 | |
---|
1036 | else |
---|
1037 | cat > $job_to_send << %%END%% |
---|
1038 | #!/bin/ksh |
---|
1039 | #PBS -S /bin/ksh |
---|
1040 | #PBS -N $job_name |
---|
1041 | #PBS -j oe |
---|
1042 | #PBS -l walltime=$timestring |
---|
1043 | #PBS -l ncpus=1 |
---|
1044 | #PBS -l pmem=${memory}mb |
---|
1045 | #PBS -m abe |
---|
1046 | #PBS -o $remote_dayfile |
---|
1047 | |
---|
1048 | . /opt/modules/default/init/ksh |
---|
1049 | $module_calls |
---|
1050 | |
---|
1051 | %%END%% |
---|
1052 | |
---|
1053 | fi |
---|
1054 | |
---|
1055 | elif [[ $remote_host = nech ]] |
---|
1056 | then |
---|
1057 | |
---|
1058 | if (( nodes > 1 )) |
---|
1059 | then |
---|
1060 | cat > $job_to_send << %%END%% |
---|
1061 | #!/bin/ksh |
---|
1062 | #PBS -l cpunum_prc=$processes_per_node,cputim_job=$cputime |
---|
1063 | #PBS -l ${qsubmem}=${Memory}gb |
---|
1064 | #PBS -b $nodes |
---|
1065 | #PBS -o $remote_dayfile |
---|
1066 | #PBS -N palm |
---|
1067 | #PBS -j o |
---|
1068 | #PBS -T mpisx |
---|
1069 | |
---|
1070 | %%END%% |
---|
1071 | |
---|
1072 | elif [[ $numprocs != 0 ]] |
---|
1073 | then |
---|
1074 | cat > $job_to_send << %%END%% |
---|
1075 | #!/bin/ksh |
---|
1076 | #PBS -l cpunum_prc=$processes_per_node,cputim_job=$cputime |
---|
1077 | #PBS -l ${qsubmem}=${Memory}gb |
---|
1078 | #PBS -o $remote_dayfile |
---|
1079 | #PBS -N palm |
---|
1080 | #PBS -j o |
---|
1081 | |
---|
1082 | %%END%% |
---|
1083 | |
---|
1084 | else |
---|
1085 | cat > $job_to_send << %%END%% |
---|
1086 | #!/bin/ksh |
---|
1087 | #PBS -l ${qsubmem}=${Memory}gb,${qsubtime}=$cputime |
---|
1088 | #PBS -o $remote_dayfile |
---|
1089 | #PBS -j o |
---|
1090 | |
---|
1091 | %%END%% |
---|
1092 | |
---|
1093 | fi |
---|
1094 | |
---|
1095 | elif [[ $remote_host = necriam ]] |
---|
1096 | then |
---|
1097 | |
---|
1098 | if (( nodes > 1 )) |
---|
1099 | then |
---|
1100 | cat > $job_to_send << %%END%% |
---|
1101 | #!/bin/ksh |
---|
1102 | #PBS -b $nodes |
---|
1103 | #PBS -o $remote_dayfile |
---|
1104 | #PBS -N $job_name |
---|
1105 | #PBS -j o |
---|
1106 | #PBS -v MPIPROGINV=YES |
---|
1107 | |
---|
1108 | %%END%% |
---|
1109 | |
---|
1110 | elif [[ $numprocs != 0 ]] |
---|
1111 | then |
---|
1112 | cat > $job_to_send << %%END%% |
---|
1113 | #!/bin/ksh |
---|
1114 | #PBS -q ${queue} |
---|
1115 | #PBS -o $remote_dayfile |
---|
1116 | #PBS -N $job_name |
---|
1117 | #PBS -j o |
---|
1118 | #PBS -v MPIPROGINV=YES |
---|
1119 | |
---|
1120 | %%END%% |
---|
1121 | |
---|
1122 | else |
---|
1123 | cat > $job_to_send << %%END%% |
---|
1124 | #!/bin/ksh |
---|
1125 | #PBS -o $remote_dayfile |
---|
1126 | #PBS -j o |
---|
1127 | |
---|
1128 | %%END%% |
---|
1129 | |
---|
1130 | fi |
---|
1131 | |
---|
1132 | elif [[ $remote_host = lctit ]] |
---|
1133 | then |
---|
1134 | cat > $job_to_send << %%END%% |
---|
1135 | #!/bin/ksh |
---|
1136 | |
---|
1137 | $module_calls |
---|
1138 | |
---|
1139 | %%END%% |
---|
1140 | |
---|
1141 | # OPTIONEN FUER SUBMIT-KOMMANDO ZUSAMMENSTELLEN |
---|
1142 | if [[ $tasks_per_node != $processes_per_node ]] |
---|
1143 | then |
---|
1144 | submcom="$submcom -W group_list=$group_number -N $job_name -l walltime=$timestring -l select=$nodes:ncpus=$processes_per_node:mpiprocs=$tasks_per_node:mem=${Memory}gb -o $remote_dayfile -j oe -q $queue " |
---|
1145 | else |
---|
1146 | submcom="$submcom -W group_list=$group_number -N $job_name -l walltime=$timestring -l select=$nodes:ncpus=$processes_per_node:mpiprocs=$tasks_per_node:mem=${Memory}gb -l place=scatter -o $remote_dayfile -j oe -q $queue " |
---|
1147 | fi |
---|
1148 | |
---|
1149 | else |
---|
1150 | |
---|
1151 | cat > $job_to_send << %%END%% |
---|
1152 | # @\$-q ${queue} |
---|
1153 | # @\$-l${qsubtime} $timestring |
---|
1154 | # @\$-l${qsubmem} ${memory}mb |
---|
1155 | # @\$-o $remote_dayfile |
---|
1156 | # @\$-eo |
---|
1157 | |
---|
1158 | %%END%% |
---|
1159 | |
---|
1160 | fi |
---|
1161 | |
---|
1162 | |
---|
1163 | # BEI RECHNUNG AUF REMOTE-MASCHINEN RUECKTRANSFER DES DAYFILES PER TRAP |
---|
1164 | # BEI EXIT VERANLASSEN |
---|
1165 | # VEKTORRECHNER MUSS EIGENEN JOB STARTEN, DA DORT NOHUP NICHT FUNKTIONIERT |
---|
1166 | # AUF IBM IN SEOUL IST RUECKTRANSFER ZUR ZEIT GENERELL NICHT MOEGLICH |
---|
1167 | if [[ $delete_dayfile = false && $remote_host != $local_host ]] |
---|
1168 | then |
---|
1169 | echo "set +vx" >> $job_to_send |
---|
1170 | echo "trap '" >> $job_to_send |
---|
1171 | echo "set +vx" >> $job_to_send |
---|
1172 | if [[ $(echo $remote_host | cut -c1-3) = ibm || $(echo $remote_host | cut -c1-5) = lcsgi || $(echo $remote_host | cut -c1-3) = nec ]] |
---|
1173 | then |
---|
1174 | if [[ $remote_host = ibmh ]] |
---|
1175 | then |
---|
1176 | return_queue=c1 |
---|
1177 | elif [[ $remote_host = ibmkisti ]] |
---|
1178 | then |
---|
1179 | return_queue=class.1-2 |
---|
1180 | elif [[ $remote_host = ibmku ]] |
---|
1181 | then |
---|
1182 | return_queue=sdbg2 |
---|
1183 | elif [[ $remote_host = ibms ]] |
---|
1184 | then |
---|
1185 | return_queue=p_normal |
---|
1186 | elif [[ $remote_host = ibmy ]] |
---|
1187 | then |
---|
1188 | return_queue=serial |
---|
1189 | elif [[ $remote_host = lcsgih || $remote_host = lcsgib ]] |
---|
1190 | then |
---|
1191 | return_queue=serialq |
---|
1192 | elif [[ $remote_host = necriam ]] |
---|
1193 | then |
---|
1194 | return_queue=SP |
---|
1195 | else |
---|
1196 | return_queue=unknown |
---|
1197 | fi |
---|
1198 | |
---|
1199 | if [[ $(echo $remote_host | cut -c1-3) = ibm ]] |
---|
1200 | then |
---|
1201 | |
---|
1202 | if [[ $remote_host = ibmku ]] |
---|
1203 | then |
---|
1204 | echo "echo \"#!/usr/bin/ksh\" >> scpjob.$kennung" >> $job_to_send |
---|
1205 | echo "echo \"# @ shell = /usr/bin/ksh\" >> scpjob.$kennung" >> $job_to_send |
---|
1206 | else |
---|
1207 | echo "echo \"#!/bin/ksh\" >> scpjob.$kennung" >> $job_to_send |
---|
1208 | fi |
---|
1209 | echo "echo \"# @ job_type = serial\" >> scpjob.$kennung" >> $job_to_send |
---|
1210 | echo "echo \"# @ job_name = transfer\" >> scpjob.$kennung" >> $job_to_send |
---|
1211 | echo "echo \"# @ resources = ConsumableCpus(1) ConsumableMemory(1 gb)\" >> scpjob.$kennung" >> $job_to_send |
---|
1212 | echo "echo \"# @ wall_clock_limit = 00:10:00,00:10:00\" >> scpjob.$kennung " >> $job_to_send |
---|
1213 | echo "echo \"# @ output = job_queue/last_job_transfer_protocol\" >> scpjob.$kennung" >> $job_to_send |
---|
1214 | echo "echo \"# @ error = job_queue/last_job_transfer_protocol\" >> scpjob.$kennung" >> $job_to_send |
---|
1215 | if [[ $host != "ibmh" ]] |
---|
1216 | then |
---|
1217 | echo "echo \"# @ class = $return_queue\" >> scpjob.$kennung" >> $job_to_send |
---|
1218 | fi |
---|
1219 | echo "echo \"# @ image_size = 10\" >> scpjob.$kennung" >> $job_to_send |
---|
1220 | echo "echo \"# @ notification = never\" >> scpjob.$kennung" >> $job_to_send |
---|
1221 | |
---|
1222 | echo "echo \"# @ queue\" >> scpjob.$kennung" >> $job_to_send |
---|
1223 | echo "echo \" \" >> scpjob.$kennung" >> $job_to_send |
---|
1224 | |
---|
1225 | echo "echo \"set -x\" >> scpjob.$kennung" >> $job_to_send |
---|
1226 | echo "echo \"batch_scp -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \\\"$job_catalog\\\" $local_dayfile\" >> scpjob.$kennung" >> $job_to_send |
---|
1227 | if [[ $remote_host = ibmku ]] |
---|
1228 | then |
---|
1229 | echo "echo \"rm scpjob.$kennung\" >> scpjob.$kennung" >> $job_to_send |
---|
1230 | fi |
---|
1231 | echo "echo \"exit\" >> scpjob.$kennung" >> $job_to_send |
---|
1232 | |
---|
1233 | elif [[ $remote_host = nech ]] |
---|
1234 | then |
---|
1235 | echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send |
---|
1236 | echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send |
---|
1237 | echo "#PBS -l ${qsubmem}=1GB,${qsubtime}=100" >> $job_to_send |
---|
1238 | echo "#PBS -o last_job_transfer_protocol" >> $job_to_send |
---|
1239 | echo "#PBS -j o" >> $job_to_send |
---|
1240 | echo " " >> $job_to_send |
---|
1241 | echo "set -x" >> $job_to_send |
---|
1242 | echo "cd /pf/b/${remote_user}/job_queue" >> $job_to_send |
---|
1243 | echo "batch_scp -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
1244 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
1245 | echo "%%END%%" >> $job_to_send |
---|
1246 | |
---|
1247 | elif [[ $remote_host = necriam ]] |
---|
1248 | then |
---|
1249 | echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send |
---|
1250 | echo "#PBS -q $return_queue" >> $job_to_send |
---|
1251 | echo "#PBS -o last_job_transfer_protocol" >> $job_to_send |
---|
1252 | echo "#PBS -j o" >> $job_to_send |
---|
1253 | echo " " >> $job_to_send |
---|
1254 | echo "set -x" >> $job_to_send |
---|
1255 | echo "batch_scp -d -w 10 -u $local_user $local_addres $remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
1256 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
1257 | echo "%%END%%" >> $job_to_send |
---|
1258 | |
---|
1259 | elif [[ $(echo $remote_host | cut -c1-5) = lcsgi ]] |
---|
1260 | then |
---|
1261 | echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send |
---|
1262 | echo "#!/bin/bash" >> $job_to_send |
---|
1263 | echo "#PBS -N job_protocol_transfer" >> $job_to_send |
---|
1264 | echo "#PBS -l walltime=00:30:00" >> $job_to_send |
---|
1265 | echo "#PBS -l nodes=1:ppn=1" >> $job_to_send |
---|
1266 | echo "#PBS -l feature=data" >> $job_to_send |
---|
1267 | echo "#PBS -o \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send |
---|
1268 | echo "#PBS -j oe" >> $job_to_send |
---|
1269 | echo " " >> $job_to_send |
---|
1270 | echo ". /usr/share/modules/init/bash" >> $job_to_send |
---|
1271 | echo "set -x" >> $job_to_send |
---|
1272 | echo "batch_scp -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
1273 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
1274 | echo "%%END%%" >> $job_to_send |
---|
1275 | |
---|
1276 | else |
---|
1277 | |
---|
1278 | echo "cat > scpjob.$kennung << %%END%%" >> $job_to_send |
---|
1279 | echo "# @\\\$-q $return_queue" >> $job_to_send |
---|
1280 | echo "# @\\\$-l${qsubtime} 10" >> $job_to_send |
---|
1281 | echo "# @\\\$-l${qsubmem} 10mb" >> $job_to_send |
---|
1282 | if [[ $remote_host = t3ej2 || $remote_host = t3ej5 || $remote_host = t3es ]] |
---|
1283 | then |
---|
1284 | echo "# @\$-l mpp_p=0" >> $job_to_send |
---|
1285 | fi |
---|
1286 | echo '# @\$-lF 10mb' >> $job_to_send |
---|
1287 | # echo '# @\$-o /dev/null' >> $job_to_send |
---|
1288 | echo '# @\$-o job_queue/last_job_transfer_protocol' >> $job_to_send |
---|
1289 | echo '# @\\\$-eo' >> $job_to_send |
---|
1290 | echo " " >> $job_to_send |
---|
1291 | if [[ $remote_host = t3ej2 || $remote_host = t3ej5 ]] |
---|
1292 | then |
---|
1293 | echo "set +vx" >> $job_to_send |
---|
1294 | echo ". .profile" >> $job_to_send |
---|
1295 | fi |
---|
1296 | echo "set -x" >> $job_to_send |
---|
1297 | echo "batch_scp -d -w 10 -u $local_user $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null" >> $job_to_send |
---|
1298 | echo "[[ \"\$for_subjob_to_do\" != \"\" ]] && eval \$for_subjob_to_do" >> $job_to_send |
---|
1299 | echo "%%END%%" >> $job_to_send |
---|
1300 | fi |
---|
1301 | |
---|
1302 | if [[ $(echo $remote_host | cut -c1-3) = ibm ]] |
---|
1303 | then |
---|
1304 | echo "llsubmit scpjob.$kennung" >> $job_to_send |
---|
1305 | elif [[ $(echo $remote_host | cut -c1-5) = lcsgi ]] |
---|
1306 | then |
---|
1307 | echo "rm -rf \$HOME/job_queue/last_job_transfer_protocol" >> $job_to_send |
---|
1308 | echo "chmod u+x scpjob.$kennung" >> $job_to_send |
---|
1309 | echo "msub scpjob.$kennung" >> $job_to_send |
---|
1310 | elif [[ $remote_host = t3eb || $remote_host = t3eh || $remote_host = t3ej2 || $remote_host = t3ej5 ]] |
---|
1311 | then |
---|
1312 | echo "qsub -J n scpjob.$kennung" >> $job_to_send |
---|
1313 | elif [[ $remote_host = t3es ]] |
---|
1314 | then |
---|
1315 | echo "qsub -J n -s /bin/ksh scpjob.$kennung" >> $job_to_send |
---|
1316 | else |
---|
1317 | echo "qsub scpjob.$kennung" >> $job_to_send |
---|
1318 | fi |
---|
1319 | if [[ $remote_host != ibmku ]] |
---|
1320 | then |
---|
1321 | echo "rm scpjob.$kennung" >> $job_to_send |
---|
1322 | fi |
---|
1323 | if [[ $remote_host = nech ]] |
---|
1324 | then |
---|
1325 | echo "cd -" >> $job_to_send |
---|
1326 | fi |
---|
1327 | else |
---|
1328 | # echo "ftpcopy -d $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile" >> $job_to_send |
---|
1329 | echo "nohup ftpcopy -d -w 15 $local_addres ${job_catalog}/$remote_dayfile \"$job_catalog\" $local_dayfile > /dev/null &" >> $job_to_send |
---|
1330 | fi |
---|
1331 | echo "set -x" >> $job_to_send |
---|
1332 | echo " ' exit" >> $job_to_send |
---|
1333 | echo "set -x" >> $job_to_send |
---|
1334 | fi |
---|
1335 | |
---|
1336 | |
---|
1337 | |
---|
1338 | # EIGENTLICHE JOB-DATEI AN QSUB-KOMMANDOS ANHAENGEN |
---|
1339 | cat $file_to_send >> $job_to_send |
---|
1340 | |
---|
1341 | if [[ $remote_host = ibm ]] |
---|
1342 | then |
---|
1343 | echo " " >> $job_to_send |
---|
1344 | echo "exit" >> $job_to_send |
---|
1345 | fi |
---|
1346 | |
---|
1347 | # remove job file |
---|
1348 | if [[ $remote_host = lctit || $remote_host = ibmku ]] |
---|
1349 | then |
---|
1350 | echo " " >> $job_to_send |
---|
1351 | echo "rm ~/job_queue/$job_on_remhost" >> $job_to_send |
---|
1352 | fi |
---|
1353 | |
---|
1354 | |
---|
1355 | |
---|
1356 | # USER-NAME AUF ZIELRECHNER AUS .NETRC-DATEI ERMITTELN |
---|
1357 | if [[ -z $remote_user ]] |
---|
1358 | then |
---|
1359 | if [[ $remote_host = t3eb || $remote_host = t3eh || $remote_host = t3ej2 || $remote_host = t3ej5 || $remote_host = t3es || $remote_host = vpp ]] |
---|
1360 | then |
---|
1361 | grep $remote_addres ~/.netrc | read dum dum dum remote_user dum dum |
---|
1362 | fi |
---|
1363 | fi |
---|
1364 | |
---|
1365 | |
---|
1366 | |
---|
1367 | # JOB AUF ZIELRECHNER TRANSFERIEREN BZW. INS JOBVERZEICHNIS KOPIEREN |
---|
1368 | if [[ $no_submit = false ]] |
---|
1369 | then |
---|
1370 | if [[ $remote_host != $local_host ]] |
---|
1371 | then |
---|
1372 | [[ $verify = true ]] && printf "\n >>> transfering job to \"$remote_host\"..." |
---|
1373 | if [[ $remote_host = ibms || $remote_host = ibmy ]] # ssh on ibms cannot handle "~/" |
---|
1374 | then |
---|
1375 | job_catalog_save=$job_catalog |
---|
1376 | job_catalog=job_queue |
---|
1377 | elif [[ $remote_host = nech ]] |
---|
1378 | then |
---|
1379 | job_catalog_save=$job_catalog |
---|
1380 | job_catalog=/hpf/b/${remote_user}/job_queue |
---|
1381 | fi |
---|
1382 | if [[ $local_host = decalpha ]] |
---|
1383 | then |
---|
1384 | # VERWENDUNG VON SCP AUF DECALPHA FRAGT FEHLERHAFTERWEISE |
---|
1385 | # PASSWORT AB |
---|
1386 | /bin/scp $job_to_send ${remote_user}@${remote_addres}:${job_catalog}/$job_on_remhost |
---|
1387 | elif [[ $remote_host = nech ]] |
---|
1388 | then |
---|
1389 | # DATEIEN KOENNEN NUR UEBER DEN ARCHIVE-SERVER DES DKRZ |
---|
1390 | # TRANSFERIERT WERDEN |
---|
1391 | scp $job_to_send ${remote_user}@136.172.44.205:${job_catalog}/$job_on_remhost |
---|
1392 | else |
---|
1393 | scp $job_to_send ${remote_user}@${remote_addres}:${job_catalog}/$job_on_remhost |
---|
1394 | fi |
---|
1395 | if [[ $? = 1 ]] |
---|
1396 | then |
---|
1397 | locat=scp; exit |
---|
1398 | fi |
---|
1399 | if [[ $remote_host = ibms ]] |
---|
1400 | then |
---|
1401 | job_catalog=$job_catalog_save |
---|
1402 | fi |
---|
1403 | [[ $verify = true ]] && printf "\n >>> finished\n" |
---|
1404 | else |
---|
1405 | eval job_catalog=$job_catalog |
---|
1406 | cp $job_to_send ${job_catalog}/$job_on_remhost |
---|
1407 | fi |
---|
1408 | |
---|
1409 | |
---|
1410 | |
---|
1411 | # NQS- BZW. LOADLEVELER-JOB STARTEN |
---|
1412 | if [[ $remote_host != $local_host ]] |
---|
1413 | then |
---|
1414 | [[ $verify = true ]] && printf "\n >>> submitting job using \"qsub\"...\n" |
---|
1415 | |
---|
1416 | if [[ $(echo $remote_host | cut -c1-5) = lcsgi && $prio = true ]] |
---|
1417 | then |
---|
1418 | printf "\n >>> submit with HLRN qos-feature hiprio...\n" |
---|
1419 | ssh $remote_addres -l $remote_user "cd $job_catalog; $submcom -l qos=hiprio $job_on_remhost; rm $job_on_remhost" |
---|
1420 | elif [[ $remote_host = ibmku ]] |
---|
1421 | then |
---|
1422 | ssh $remote_addres -l $remote_user "cd $job_catalog; $submcom $job_on_remhost" |
---|
1423 | else |
---|
1424 | ssh $remote_addres -l $remote_user "cd $job_catalog; $submcom $job_on_remhost; rm $job_on_remhost" |
---|
1425 | fi |
---|
1426 | |
---|
1427 | [[ $verify = true ]] && printf " >>> o.k.\n" |
---|
1428 | else |
---|
1429 | cd $job_catalog |
---|
1430 | if [[ $(echo $local_host | cut -c1-5) = lcsgi || $(echo $local_host | cut -c1-3) = ibm ]] |
---|
1431 | then |
---|
1432 | eval $submcom $job_on_remhost |
---|
1433 | elif [[ $local_host = lcfimm || $local_host = lctit || $localhost = lcxt4 || $localhost = lck || $localhost = lckordi|| $localhost = lcyon ]] |
---|
1434 | then |
---|
1435 | chmod u+x $job_on_remhost |
---|
1436 | echo "$submcom $job_on_remhost" |
---|
1437 | eval $submcom $job_on_remhost |
---|
1438 | elif [[ $local_host = nech ]] |
---|
1439 | then |
---|
1440 | if [[ $queue = default ]] |
---|
1441 | then |
---|
1442 | eval $submcom $job_on_remhost |
---|
1443 | else |
---|
1444 | eval $submcom -q $queue $job_on_remhost |
---|
1445 | fi |
---|
1446 | else |
---|
1447 | qsub $job_on_remhost |
---|
1448 | fi |
---|
1449 | |
---|
1450 | # Jobfile must not be deleted on lctit/ibmku!! This will be done |
---|
1451 | # only at the end of the job. |
---|
1452 | if [[ $local_host != lctit && $local_host != ibmku ]] |
---|
1453 | then |
---|
1454 | rm $job_on_remhost |
---|
1455 | fi |
---|
1456 | cd - > /dev/null |
---|
1457 | fi |
---|
1458 | fi |
---|
1459 | |
---|
1460 | |
---|
1461 | |
---|
1462 | # ABSCHLUSSARBEITEN |
---|
1463 | |
---|
1464 | if [[ $no_submit = false ]] |
---|
1465 | then |
---|
1466 | rm $job_to_send |
---|
1467 | fi |
---|
1468 | [[ $verify = true ]] && printf "\n\n *** SUBJOB finished \n\n" |
---|