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source: palm/trunk/SCRIPTS/palmrungui @ 4831

Last change on this file since 4831 was 4789, checked in by maronga, 4 years ago
minor fix in palmrungui, added support for -W option
Property svn:executable set to ``* Property svn:keywords set to `Id`
File size: 71.0 KB

Rev	Line
[4670]	1	#!/usr/bin/env python3
[2413]	2	# -- coding: utf-8 --
	3	#--------------------------------------------------------------------------------#
[2696]	4	# This file is part of the PALM model system.
[2413]	5	#
	6	# PALM is free software: you can redistribute it and/or modify it under the terms
	7	# of the GNU General Public License as published by the Free Software Foundation,
	8	# either version 3 of the License, or (at your option) any later version.
	9	#
	10	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	#
	14	# You should have received a copy of the GNU General Public License along with
	15	# PALM. If not, see <http://www.gnu.org/licenses/>.
	16	#
[4481]	17	# Copyright 1997-2020 Leibniz Universitaet Hannover
[2413]	18	#--------------------------------------------------------------------------------#
	19	#
	20	# Current revisions:
	21	# -----------------
[4789]	22	#
	23	#
[2413]	24	# Former revisions:
	25	# -----------------
	26	# $Id: palmrungui 4789 2020-11-18 09:05:50Z suehring $
[4789]	27	# Bugfix: set check boxes for cyclic fill and svf I/O when loading job from history.
	28	# Added support for option -W (wait for job; dependency mode)
	29	#
	30	#
	31	# 4670 2020-09-09 17:27:45Z maronga
[4670]	32	# Ported to PyQt5, removed support for user parameters. Added support for Option
	33	# "-V" (do not re-build pre-built source code). Changed activation strings
	34	# according to default .palm.iofiles (svfin/svfout/rec)
	35	#
	36	# 4482 2020-04-01 13:17:50Z maronga
[4482]	37	# Added possibility to delete all files in a directory and option to create
	38	# blank new jobs
	39	#
	40	# 4481 2020-03-31 18:55:54Z maronga
[4481]	41	# Bugfixes: - reading history lines discard button caused error message
	42	# - deleting of USER_CODE files did not work
	43	#
	44	# 4470 2020-03-24 06:52:19Z maronga
[4470]	45	# Added file size output, more I/O functionalities, new/removed buttons
	46	#
	47	# 4428 2020-02-27 11:43:53Z maronga
[4428]	48	# Bugfix for update button
	49	#
	50	# 4427 2020-02-27 11:29:51Z maronga
[4427]	51	# Small fixes and adjustments
	52	#
	53	# 4420 2020-02-24 14:13:56Z maronga
[4420]	54	# Bugfix: minor fixes related to start buttons
	55	#
	56	# 4411 2020-02-18 14:28:02Z maronga
[4411]	57	# Added new features: individual tag for submitted runs, automatic finding of
	58	# configuration, start of palmbuild from GUI
	59	#
	60	# 4405 2020-02-12 19:11:11Z maronga
[4405]	61	# Major revisions: New layout. Merged with palm job manager (palm_jm).
	62	# Minor revisions: Misc. bugs fixed.
	63	#
	64	# 4394 2020-02-04 21:40:38Z maronga
[4394]	65	# Bugfix: harmonized naming convention of configuration files
	66	#
	67	# 4393 2020-02-04 21:24:48Z maronga
[4393]	68	# Removed PALM_BIN dependency and os calls
	69	#
	70	# 3487 2018-11-05 07:18:02Z maronga
[3487]	71	# Renamed options -d and -h to -r and -c.
	72	#
	73	# 2825 2018-02-20 21:48:27Z maronga
[2825]	74	# Adjusted to work with newest version of palmrun
	75	#
	76	# 2718 2018-01-02 08:49:38Z maronga
[2716]	77	# Corrected "Former revisions" section
	78	#
	79	# 2696 2017-12-14 17:12:51Z kanani
	80	# Change in file header (GPL part)
	81	#
	82	# 2484 2017-09-20 14:22:42Z maronga
[2484]	83	# Added PALM logo
	84	#
	85	# 2480 2017-09-19 06:24:14Z maronga
[2480]	86	# option -A (project account number) added
	87	#
	88	# 2477 2017-09-18 08:42:29Z maronga
[2477]	89	# Renamed restart run appendix from "f" to "r". Bugfix for displaying restart runs.>
	90	# Revised list of recently submitted jobs
	91	#
	92	# 2413 2017-09-06 12:48:29Z maronga
[2413]	93	# Renamed to palmrungui and adapted for use with palmrun instead of mrun.
	94	#
	95	# 2316 2017-07-20 07:53:42Z maronga
	96	# Initial revision in python
	97	#
	98	#
	99	#
	100	# Description:
	101	# ------------
	102	# Graphical user interface for the palmrun script.
	103	# @author Felix Gaschler
	104	# @author BjÃ¶rn Maronga (maronga@muk.uni-hannover.de)
	105	#
	106	# Instructions:
	107	# -------------
	108	#
	109	#------------------------------------------------------------------------------!
	110	import sys
	111	import subprocess
[4670]	112	from PyQt5 import QtCore, QtGui, uic, QtWidgets
	113	from PyQt5.QtWidgets import QMainWindow, QApplication
	114	from PyQt5.QtCore import QProcess, pyqtSlot, QTimer
[2413]	115	from time import strftime
	116	import os
[4405]	117	import shutil
[2413]	118
[4470]	119	global update_frequency
	120	update_frequency = 5*60000
[2413]	121
	122	# Determine PALM directories
	123	try:
[4393]	124	devnull = open(os.devnull, 'w')
	125	palm_dir = os.getcwd()
	126	palm_bin = palm_dir + '/trunk/SCRIPTS'
[4470]	127	palm_source = palm_dir + '/trunk/SOURCE'
[4393]	128	job_dir = palm_dir + '/JOBS'
	129	user_dir = palm_dir + '/USER_CODE'
[4670]	130	with open(palm_bin + '/palmrungui', 'r', encoding='utf8') as fh:
[4393]	131	# file found
	132	out = None
[2413]	133	except:
[4670]	134	print ("Error. palmrungui probably called in wrong directory.")
[2413]	135	raise SystemExit
	136
	137
[4470]	138	# returns the human readable file size of filename
	139	def file_size(filename, suffix='B'):
	140	size_raw = os.stat(filename).st_size
	141	for unit in [' ',' K',' M',' G',' T']:
	142	if abs(size_raw) < 1024.0:
	143	return "%i%s%s" % (size_raw, unit, suffix)
	144	size_raw /= 1024.0
	145	return "%.1f%s%s" % (num, 'Y', suffix)
	146
[4670]	147	def ilen(iterable):
	148	return reduce(lambda sum, element: sum + 1, iterable, 0)
[4470]	149
[2413]	150	palmrunline = ""
[4405]	151	set_list = []
[2413]	152
	153	Ui_MainWindow = uic.loadUiType("%s/palmrungui_files/mainwindow.ui" % (palm_bin))[0]
	154	Ui_helpDialog = uic.loadUiType("%s/palmrungui_files/help.ui" % (palm_bin))[0]
	155	Ui_aboutDialog = uic.loadUiType("%s/palmrungui_files/about.ui" % (palm_bin))[0]
	156
[4670]	157	class HelpDialog(QtWidgets.QDialog,Ui_helpDialog):
[2413]	158	def __init__(self, parent=None):
	159	super(HelpDialog,self).__init__()
	160	self.setupUi(self)
	161
[4670]	162	class AboutDialog(QtWidgets.QDialog,Ui_aboutDialog):
[2413]	163	def __init__(self, parent=None):
	164	super(AboutDialog,self).__init__()
	165	self.setupUi(self)
	166
[4670]	167	class Mainwindow(QtWidgets.QMainWindow, Ui_MainWindow):
[2413]	168	def __init__(self, parent=None):
	169	super(Mainwindow, self).__init__()
[2484]	170	self.setupUi(self)
[4670]	171
	172	self.palm_logo.setPixmap(QtGui.QPixmap(palm_bin + "/palmrungui_files/logo.png"))
	173	with open(palm_bin + "/palmrungui", encoding='utf8') as search:
[4470]	174	for line in search:
	175	line = line.rstrip()
	176	if "$Id" in line:
	177	version = "Version: r" + line.split(" ")[3] + " (" + line.split(" ")[4] + ")"
[4670]	178	self.groupBox.findChild(QtWidgets.QLabel,"label_version").setText(version)
[4470]	179	break
[2477]	180	self.recent_jobs(50)
[4405]	181	self.load_jobs()
	182
[4670]	183
	184
[4411]	185	# look up configuration files and add to combo box
	186
[4670]	187	self.group_execution.findChild(QtWidgets.QComboBox,"combo_configuration").addItem("")
[4411]	188
	189	for files in os.listdir(palm_dir):
	190	if files.startswith(".palm.config"):
[4670]	191	tmpstring = list(filter(None,files.split(".palm.config.")))[0]
	192	self.group_execution.findChild(QtWidgets.QComboBox,"combo_configuration").addItem(tmpstring)
[4411]	193
[4670]	194	commandline = self.groupBox.findChild(QtWidgets.QLineEdit,"commandline")
[2413]	195	commandline.setText("")
	196
	197	self.tabWidget.setCurrentIndex(0)
	198
[4670]	199
[4394]	200	filename = "%s/.palmrungui.default" % (palm_dir)
[2413]	201	if os.path.exists(filename):
[4670]	202	file = open(filename, "r")
	203	if ( file is not None ):
	204	# File opened successfully
	205	palmrunline = file.readline()
	206	#if neue zeile zeichen
	207	palmrunline = palmrunline[:len(palmrunline)-1]
	208	file.close()
[2413]	209
[4670]	210	# In case a palmrunline was found, load it to mainwindow
	211	if ( palmrunline != ""):
	212	palmrunline = palmrunline[17:]
	213	commandline.setText(palmrunline)
	214	self.setup_gui(palmrunline)
[4405]	215
[4670]	216	QtWidgets.QApplication.processEvents()
[4405]	217
[4670]	218	# Start refresh timer. On timeout perform update
[4405]	219
[4470]	220	self.timer = QtCore.QTimer(self)
	221	self.timer.timeout.connect(self.update_all)
	222	self.timer.setSingleShot(False)
	223	self.timer.start(update_frequency)
	224
	225	# The timetimer counts the time since last update
	226	self.timetimer= QtCore.QElapsedTimer()
	227	self.timetimer.start()
	228
	229	# The labeltimer induces the update of the remaining time in the UI
[4670]	230
[4470]	231	self.labeltimer = QtCore.QTimer(self)
	232	self.labeltimer.timeout.connect(self.UpdatePush)
	233	self.labeltimer.setSingleShot(False)
	234
	235	# Update in the UI will be performed at each 1/10 of the update interval
	236	self.labeltimer.start(update_frequency/10)
	237	self.push_update.setText("Update (" + str(int(update_frequency/1000/60)) + " min)")
	238
[2413]	239	# starts xterm with palmrun commandline
	240	#######################################
	241	def startpalmrun(self):
[4670]	242	palmrunline = str(self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").text())
[4411]	243	palmrunline_save = palmrunline
[4670]	244
[2413]	245	# Disable the main window
	246	self.tabWidget.setEnabled(False)
[4670]	247	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(False)
	248	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(False)
	249	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setText("wait...")
	250	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText("Executing palmrun in xterm...")
[4470]	251
[2413]	252	# Wait until all commands have been executed (ugly) ?
	253	#for i in range(0,21):
	254	# qApp->processEvents()
[4470]	255
[2413]	256	# Start xterm as QProcess
	257	palmrun = QProcess()
	258	palmrun.setProcessChannelMode(QProcess.MergedChannels) # mergedChannels
[4393]	259	palmrun.setWorkingDirectory(palm_dir)
[4470]	260
[2413]	261	geomet = self.frameGeometry()
[4470]	262
[2413]	263	posx = geomet.x()+geomet.width()
	264	posy = geomet.y()
[4470]	265
	266	if ( os.path.isfile("palmrungui.log") ):
	267	os.remove("palmrungui.log")
	268
	269	s = " -title \"Executing palmrun...\" -fa \"Monospace\" -l -lf \"palmrungui.log\" -fs 11 -geometry \"80x38+%d+%d\" -e \"" % (posx,posy)
	270	palmrunline = "%s%s ;echo -n '--> Press enter to continue...';read yesno\"</dev/stdin" % (s, palmrunline.replace("\"","\'"))
	271
[2413]	272	mString = "xterm %s" % (palmrunline)
[4411]	273	palmrun.start(mString)
[4470]	274
[2413]	275	if( palmrun.waitForStarted() is False ):
	276	return
[4470]	277
[2413]	278	# Wait until palmrun has finished or wait for 200 minutes
[4411]	279	palmrun.waitForFinished(3600000)
[4470]	280
[2413]	281	# Jobs has been submitted or aborted. Continuing...
	282	# Save the palmrun command to history file
[4394]	283	filename = "%s/.palmrungui.history" % (palm_dir)
[2413]	284	tmstamp = strftime("%Y/%m/%d %H:%M")
[4670]	285	tag = str(self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").text())
[2413]	286
	287	file = open(filename,"a")
[4670]	288	s = "%s %s (%s)\n" % (tmstamp,palmrunline_save,tag)
[2413]	289	file.write(s)
	290	file.close()
	291
	292	# Enable main window again
	293	self.tabWidget.setEnabled(True)
[4670]	294	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(True)
	295	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setText("palmrun")
	296	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(palmrunline_save)
	297	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
[2413]	298
	299	# Reload recent jobs
[2477]	300	self.recent_jobs(50)
[2413]	301
	302
[4470]	303
	304	# Update the label
	305	def UpdatePush(self):
[4670]	306	remaining_time = int((update_frequency - self.timetimer.elapsed()) / 1000 / 60)
[4470]	307	self.push_update.setText("Update (" + str(remaining_time) + " min)")
	308
	309
[4411]	310	# starts xterm with palmbuild commandline
	311	#######################################
	312	def startpalmbuild(self):
[4670]	313	palmbuildline = 'palmbuild -c ' + str(self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").currentText())
[4470]	314
[4670]	315	full_build = self.group_execution.findChild(QtWidgets.QCheckBox,"check_rebuild").checkState()
[4470]	316
	317	if ( full_build == 2 ):
	318	for filename in os.listdir(palm_source):
	319	os.utime(palm_source + "/" + filename, None)
	320
[4670]	321	palmrunline_save = str(self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").text())
[4470]	322
[4411]	323	# Disable the main window
[4420]	324	palmbuildline_save = palmbuildline
[4411]	325	self.tabWidget.setEnabled(False)
[4670]	326	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(False)
	327	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(False)
	328	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setText("wait...")
	329	self.group_execution.findChild(QtWidgets.QPushButton,"button_palmbuild").setText("wait...")
	330	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText("Executing palmbuild in xterm...")
[4411]	331
	332	# Wait until all commands have been executed (ugly) ?
	333	#for i in range(0,21):
	334	# qApp->processEvents()
	335
	336	# Start xterm as QProcess
	337	palmbuild = QProcess()
	338	palmbuild.setProcessChannelMode(QProcess.MergedChannels) # mergedChannels
	339	palmbuild.setWorkingDirectory(palm_dir)
	340
	341	geomet = self.frameGeometry()
	342
	343	posx = geomet.x()+geomet.width()
	344	posy = geomet.y()
	345
	346	s = " -title \"Executing palmbuild...\" -fa \"Monospace\" -fs 11 -geometry \"80x38+%d+%d\" -e \"" % (posx,posy)
	347	palmbuildline = "%s%s;echo -n '--> Press enter to continue...';read yesno\"</dev/stdin" % (s, palmbuildline.replace("\"","\'"))
	348
	349	mString = "xterm %s" % (palmbuildline)
	350	palmbuild.start(mString)
	351
	352	if( palmbuild.waitForStarted() is False ):
	353	return
	354
	355	# Wait until palmbuild has finished or wait for 200 minutes
	356	palmbuild.waitForFinished(3600000)
	357
	358
	359
	360	# Enable main window again
	361	self.tabWidget.setEnabled(True)
[4670]	362	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(True)
	363	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
	364	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setText("palmrun")
	365	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(palmrunline_save)
	366	self.group_execution.findChild(QtWidgets.QPushButton,"button_palmbuild").setText("(re-)build")
[4411]	367	# Reload recent jobs
	368	self.recent_jobs(50)
	369
[2413]	370	# loads recent jobs
	371	######################################
	372	def recent_jobs(self, number):
[4394]	373	fileDir = "%s/.palmrungui.history" % (palm_dir)
[2413]	374	if os.path.exists(fileDir):
	375	pass
	376	else:
	377	return
[4470]	378
[2413]	379	file = open(fileDir,"r")
	380	history = file.readlines()
	381	tmphistory = list()
[4411]	382	tmptag = list()
	383	file.close()
	384	j = 0
[2413]	385
[4670]	386	list_jobname = self.group_history.findChild(QtWidgets.QListWidget,"list_jobname")
[2413]	387	list_jobname.clear()
	388
	389	# Read history entries and append to recent job list
	390	i=len(history)-1
	391	count = 0
[2477]	392	while i>=0 and count<number:
[2413]	393	timestamp = history[i][:16]
	394	listitem = history[i][17:len(history[i])-1]
[4411]	395	tagitem = listitem
[4470]	396	configitem = listitem
[2413]	397	matchitems = list_jobname.findItems(listitem, QtCore.Qt.MatchExactly)
	398
	399	if ( len(matchitems) == 0 ):
[4670]	400	listitem = list(filter(None,listitem.split(" -r")))[1]
[4470]	401	listitem = listitem.strip()
[4670]	402	listitem = list(filter(None,listitem.split(" ")))[0]
[4470]	403	listitem = listitem.replace("\"","")
[4411]	404	list_jobname.addItem(listitem)
[4470]	405
[4670]	406	configitem = list(filter(None,configitem.split(" -c")))
	407	if ( len(configitem) < 2):
	408	count = count +1
	409	continue
	410	else:
	411	configitem = configitem[1].strip()
	412	configitem = list(filter(None,configitem.split(" ")))[0]
[4470]	413	configitem = configitem.replace("\"","")
	414
	415	s = "%s: %s (%s)" % (timestamp,listitem,configitem)
[4411]	416	tmphistory.append(s)
	417
	418
[4670]	419	tagitem = list(filter(None,tagitem.split(" (")))[1]
[4411]	420	tagitem = tagitem.replace(")","")
	421	if ( len(tagitem) == 0 ):
	422	s = "Tag: empty"
	423	else:
	424	s = "Tag: %s" % (tagitem)
	425	tmptag.append(s)
[2413]	426	count = count +1
[4411]	427
[2413]	428	j = j+1
	429
	430	if ( j == number ):
	431	break
	432	i = i-1
	433
	434	# Send to list
[4411]	435	list_jobname.clear()
[2413]	436
	437	i=0
	438	while i<len(tmphistory):
[4411]	439	list_jobname.addItem(tmphistory[i])
	440	list_jobname.item(i).setToolTip(tmptag[i])
[2413]	441	i = i+1
	442
	443
	444	# Enables coupled settings
	445	###############################
	446	def enable_coupled(self):
[4670]	447	coupledState = self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").currentText()
	448	group = self.group_execution.findChild(QtWidgets.QGroupBox, "group_coupled")
[2413]	449
	450	if (coupledState == "Restart run (coupled atmosphere ocean)" or coupledState == "Initial run (coupled atmosphere ocean)"):
	451	self.group_coupled.setEnabled(True)
	452	else:
	453	self.group_coupled.setEnabled(False)
	454
	455
[2477]	456	# select a job via click from list
[2413]	457	#################################
	458	def choosejob_list(self):
	459	# Get selected item from list
[4670]	460	list_jobname = self.group_history.findChild(QtWidgets.QListWidget,"list_jobname")
[2413]	461	filename = str(list_jobname.currentItem().text())
[4470]	462
[4411]	463	timestamp = filename[:16]
[4470]	464	jobname = filename[18:].split(" ")[0]
	465
[2413]	466	itemint = list_jobname.currentRow()
[4405]	467
[2413]	468	# Reload list
[2477]	469	self.recent_jobs(50)
[4405]	470	self.load_jobs()
[2413]	471
	472	# Set selected item to jobname
[4411]	473	list_jobname.item(itemint).setSelected(True)
[2413]	474
[4405]	475	# Set selected item to jobname in "available jobs" list
	476	item2int = self.list_jobs.findItems(jobname,QtCore.Qt.MatchCaseSensitive)
[4411]	477
	478	if ( item2int != [] ):
	479	self.list_jobs.setCurrentItem(item2int[0])
[4405]	480	self.update_input()
[4411]	481
[2413]	482
[4394]	483	fileDir = "%s/.palmrungui.history" % (palm_dir)
[2413]	484	file = open(fileDir,"r")
	485	history = file.readlines()
	486	tmphistory = list()
[4411]	487	file.close()
[2413]	488
	489	i = len(history)
	490	while i>=1:
	491	listitem = history[i-1][17:len(history[i-1])-1]
[4670]	492	listitem = list(filter(None,listitem.split(" -r")))[1]
[4470]	493	listitem = listitem.strip()
[4670]	494	listitem = list(filter(None,listitem.split(" ")))[0]
[4470]	495	listitem = listitem.replace("\"","")
[2413]	496
	497	# Select command line with correct timestamp and jobname
	498	if (history[i-1][:16] == timestamp and listitem == jobname):
	499	palmrunline = history[i-1]
	500	palmrunline = palmrunline[17:]
	501	palmrunline = palmrunline[:len(palmrunline)-1]
[4670]	502	palmrunline = list(filter(None,palmrunline.split("(")))[0]
	503	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(palmrunline)
[2477]	504
[4411]	505
	506	tag = history[i-1].split('\n')[0]
[4670]	507	tag = list(filter(None,tag.split("(")))[1]
[4411]	508	tag = tag.replace(")","")
	509
[4670]	510	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setText(tag)
[4411]	511	self.setup_gui(palmrunline)
	512	self.list_jobname.item(itemint).setSelected(True)
	513
[2413]	514	return
	515	i = i-1
	516
	517	# Change run identifer (initial, restart, coupled...)
	518	######################################################
	519	def change_rc_list(self):
[4670]	520	drop_job = self.group_execution.findChild(QtWidgets.QComboBox,"drop_job").currentText()
[2413]	521	self.change_commandline("a","")
	522
	523	# Enable PE distribution for atmosphere/ocean
	524	if ( drop_job == "Restart run (coupled atmosphere ocean)" or drop_job == "Initial run (coupled atmosphere ocean)"):
[4670]	525	drop_atmos = self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos").text()
	526	drop_ocean = self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean").text()
[2413]	527	s = "%s %s" % (drop_atmos,drop_ocean)
	528	self.change_commandline("Y",s)
	529
	530
	531	if ( drop_job == "Restart run" or drop_job == "Restart run (coupled atmosphere ocean)"):
[3487]	532	self.change_commandline("r","")
[2413]	533
	534	# Check of ocean runs
	535	else:
	536	self.delete_commandline("Y")
	537	if (drop_job == "Precursor run (ocean)"):
	538	self.activate_flag("y")
	539	else:
	540	self.deactivate_flag("y")
	541
	542	# changes commandline depending on parameters
	543	##########################################################
	544	def change_commandline(self, id_str, fwt_str):
	545	fwt_str = str(fwt_str)
	546	initialize = False
[4670]	547	palmrunline = str(self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").text())
[2413]	548	s = " -%s " % (id_str)
[4670]	549	splitline = list(filter(None,palmrunline.split(s)))
[2413]	550
	551	if ( len(splitline) == 0 ):
	552	splitline.append("palmrun")
	553	splitline.append(" ")
	554	initialize = True
	555
	556	elif ( len(splitline) == 1 ):
	557	splitline.append(" ")
	558
	559	param = splitline[1].split("-")
	560
[3487]	561	# Change in parameter "r" (jobname)
	562	if (id_str == "r"):
[4670]	563	filename = str(self.group_execution.findChild(QtWidgets.QLineEdit,"line_jobname").text())
[2413]	564	s = filename.split("JOBS/")
	565	param[0] = s[len(s)-1]
	566
	567	if ( initialize == True ):#and self.group_runcontrol.isEnabled() == True ):
	568	self.group_execution.setEnabled(True)
[4670]	569	self.group_execution.findChild(QtWidgets.QComboBox,"drop_job").setEnabled(True)
[2413]	570	self.group_advanced.setEnabled(True)
[4670]	571	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(True)
	572	self.menuBar.findChild(QtWidgets.QMenu,"menuStart").actions()[3].setEnabled(True)
	573	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
[2413]	574
	575	elif ( param[0] == ""):
	576	self.group_execution.setEnabled(False)
[4670]	577	self.group_execution.findChild(QtWidgets.QComboBox,"drop_job").setEnabled(False)
	578	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(False)
	579	self.menuBar.findChild(QtWidgets.QMenu,"menuStart").actions()[3].setEnabled(False)
[2413]	580	self.group_advanced.setEnabled(False)
[4670]	581	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
[3487]	582	self.delete_commandline("r")
[2413]	583	self.change_commandline("a","remove")
	584	return 1
	585
	586	else:
	587
	588	self.group_execution.setEnabled(True)
	589	self.drop_job.setEnabled(True)
	590	self.group_advanced.setEnabled(True)
	591
	592	# Change in parameter "a" (run control list)
	593	elif (id_str == "a"):
	594
[4670]	595	drop_job = self.group_execution.findChild(QtWidgets.QComboBox,"drop_job").currentText()
[2413]	596	rc_flag = "#"
	597
	598	if (drop_job == "Initial run"):
	599	rc_flag = "#"
	600
	601	elif (drop_job == "Restart run"):
[2477]	602	rc_flag = "r"
[2413]	603
	604	elif (drop_job == "Precursor run (atmosphere)"):
	605	rc_flag = "#"
	606
	607	elif (drop_job == "Precursor run (ocean)"):
	608	rc_flag = "o#"
	609
	610	elif (drop_job == "Initial run (coupled atmosphere ocean)"):
	611	rc_flag = "#"
	612
	613	elif (drop_job == "Restart run (coupled atmosphere ocean)"):
[2477]	614	rc_flag = "r"
[2413]	615
	616	param[0] = "\"d3%s" % (rc_flag)
	617
	618
	619	if (drop_job == "Restart run (coupled atmosphere ocean)" or drop_job == "Initial run (coupled atmosphere ocean)"):
	620	if (rc_flag == "#"):
	621	rc_flag = "o#"
	622	else:
[2825]	623	rc_flag = "or"
[2413]	624
	625	param[0] = "%s d3%s" % (param[0],rc_flag)
	626
[4670]	627	status_restarts = self.group_execution.findChild(QtWidgets.QCheckBox,"check_restarts").checkState()
[2413]	628
	629	if (status_restarts == 2):
	630	param[0]="%s restart" % (param[0])
	631
	632
[4670]	633	status_cycfill = self.group_execution.findChild(QtWidgets.QCheckBox,"check_cycfill").checkState()
[2413]	634
	635	if (status_cycfill == 2):
[4670]	636	param[0]="%s rec" % (param[0])
	637
	638	status_svf = self.group_execution.findChild(QtWidgets.QCheckBox,"check_svf").checkState()
	639
[2825]	640	if (status_svf == 2):
[4670]	641	param[0]="%s svfin" % (param[0])
	642
	643	status_svf_2 = self.group_execution.findChild(QtWidgets.QCheckBox,"check_svf_2").checkState()
[2413]	644
[4670]	645	if (status_svf_2 == 2):
	646	param[0]="%s svfout" % (param[0])
	647
[2413]	648	param[0]="%s\"" % (param[0])
[4670]	649
[2413]	650	if ( fwt_str == "remove"):
	651	self.delete_commandline(id_str)
	652	return 1
	653
	654	else:
	655	self.button_start.setEnabled(True)
	656	self.action_save.setEnabled(True)
[4670]	657	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
[2413]	658
	659	# Change in any other parameter
	660	else:
	661	if ( fwt_str != ""):
	662	param[0] = "\"%s\"" % (fwt_str)
	663
	664	else:
	665	self.delete_commandline(id_str)
	666	return 1
	667
	668	# Join the new palmrunline
	669	splitline[1]= " -".join(param)
	670
	671
	672	s = " -%s " % (id_str)
	673	newpalmrunline = s.join(splitline)
	674
[4670]	675	# Print the new palmrunline to mainwindow
[2413]	676	newpalmrunline = newpalmrunline.replace(" "," ")
[4670]	677	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(newpalmrunline)
[2413]	678
	679	# change lineinput depending on sender
	680	###################################################################################
	681	def change_lineinput(self):
[4670]	682	if ( self.sender() == self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration") ):
	683	tmptext = self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").currentText()
	684	if not tmptext:
[4411]	685	self.change_commandline("c"," ")
[4670]	686	self.group_execution.findChild(QtWidgets.QPushButton,'button_palmbuild').setEnabled(False)
[4411]	687	else:
	688	self.change_commandline("c",tmptext)
[4670]	689	self.group_execution.findChild(QtWidgets.QPushButton,'button_palmbuild').setEnabled(True)
[2413]	690
[4670]	691	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_q")):
	692	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_q").text()
[2413]	693	self.change_commandline("q",tmptext)
	694
[4670]	695	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_account")):
	696	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_account").text()
[2480]	697	self.change_commandline("A",tmptext)
[4789]	698
	699	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_wait")):
	700	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_wait").text()
	701	self.change_commandline("W",tmptext)
	702
[4670]	703	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_pe")):
	704	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_pe").text()
[2413]	705	self.change_commandline("X",tmptext)
	706
[4670]	707	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_tpn")):
	708	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_tpn").text()
[2413]	709	self.change_commandline("T",tmptext)
	710
[4670]	711	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_time")):
	712	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_time").text()
[2413]	713	self.change_commandline("t",tmptext)
	714
[4670]	715	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_M")):
	716	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_M").text()
[2413]	717	self.change_commandline("M",tmptext)
	718
[4670]	719	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_m")):
	720	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_m").text()
[2413]	721	self.change_commandline("m",tmptext)
	722
[4670]	723	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_D")):
	724	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_D").text()
[2413]	725	self.change_commandline("D",tmptext)
	726
[4670]	727	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_c")):
	728	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_c").text()
[4394]	729	if ( tmptext == ".palmrungui.config"):
[2413]	730	tmptext = ""
	731	self.change_commandline("c",tmptext)
	732
[4670]	733	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_s")):
	734	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_s").text()
[2413]	735	self.change_commandline("s",tmptext)
	736
[4670]	737	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_w")):
	738	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_w").text()
[2413]	739	self.change_commandline("w",tmptext)
	740
[4670]	741	elif ( self.sender() == self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos") or
	742	self.sender() == self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean")):
	743	t1 = self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos").text()
	744	t2 = self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean").text()
[2413]	745	tmptext = "%s %s" % (t1,t2)
	746
	747	self.change_commandline("Y",tmptext)
	748
	749	# try catch sowas in der art
	750	pe1 = 0
	751	pe2 = 0
	752
	753	try:
	754	pe1 = int(t1)
	755	except ValueError:
	756	pass
[4670]	757
[2413]	758	try:
	759	pe2 = int(t2)
	760	except ValueError:
	761	pass
[4670]	762
[2413]	763	PE_total = pe1+pe2
[4670]	764	self.group_execution.findChild(QtWidgets.QLineEdit,"line_pe").setText(str(PE_total))
[2413]	765	self.change_commandline("X",str(PE_total))
[4670]	766
[2413]	767	# deletes parameter from commandline
	768	#####################################################################################
	769	def delete_commandline(self, id_str):
	770	# Read palmrunline
[4670]	771	commandline = self.groupBox.findChild(QtWidgets.QLineEdit,"commandline")
[2413]	772	palmrunline = str(commandline.text())
	773	s = " -%s" % (id_str)
[4670]	774	splitline = list(filter(None,palmrunline.split(s)))
[2413]	775
	776	if ( len(splitline) == 1):
	777	return 1
	778	else:
	779	param = splitline[1].split("-")
	780	param[0] = ""
	781	splitline[1]= " -".join(param)
	782	newpalmrunline = "".join(splitline)
	783	newpalmrunline = newpalmrunline.replace(" "," ")
	784
	785	# Print new palmrunline to screen
	786	commandline.setText(newpalmrunline)
	787
	788	# controls flags
	789	###################################################################################
	790	def check_flags(self):
[4670]	791	status = self.group_execution.findChild(QtWidgets.QCheckBox,"check_delete_tmp_files" ).checkState()
[2413]	792	if (status == 2):
	793	self.activate_flag("B")
	794	else:
	795	self.deactivate_flag("B")
	796
[4789]	797	status = self.groupBox.findChild(QtWidgets.QCheckBox,"check_verbose" ).checkState()
[2413]	798	if (status == 2):
	799	self.activate_flag("v")
	800	else:
	801	self.deactivate_flag("v")
	802
[4670]	803	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_b" ).checkState()
[2413]	804	if (status == 2):
	805	self.activate_flag("b")
	806	else:
	807	self.deactivate_flag("b")
	808
[4670]	809	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_F" ).checkState()
[2413]	810	if (status == 2):
	811	self.activate_flag("F")
	812	else:
	813	self.deactivate_flag("F")
	814
[4670]	815	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_I" ).checkState()
[2413]	816	if (status == 2):
	817	self.activate_flag("I")
	818	else:
	819	self.deactivate_flag("I")
	820
[4670]	821	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_k" ).checkState()
[2413]	822	if (status == 2):
	823	self.activate_flag("k")
	824	else:
	825	self.deactivate_flag("k")
	826
[4670]	827	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_O" ).checkState()
[2413]	828	if (status == 2):
	829	self.activate_flag("O")
	830	else:
	831	self.deactivate_flag("O")
	832
[4670]	833	status = self.group_execution.findChild(QtWidgets.QCheckBox,"check_prebuilt" ).checkState()
[2413]	834	if (status == 2):
[4670]	835	self.activate_flag("V")
	836	else:
	837	self.deactivate_flag("V")
	838
	839	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_x" ).checkState()
	840	if (status == 2):
[2413]	841	self.activate_flag("x")
	842	else:
	843	self.deactivate_flag("x")
	844
[4670]	845	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_Z" ).checkState()
[2413]	846	if (status == 2):
	847	self.activate_flag("Z")
	848	else:
	849	self.deactivate_flag("Z")
	850
	851	# changes flag to parameter
	852	##################################################################################
	853	def activate_flag(self, id_str):
[4670]	854	commandline = self.groupBox.findChild(QtWidgets.QLineEdit,"commandline")
[2413]	855	palmrunline = str(commandline.text())
	856	s = " -%s" % (id_str)
[4670]	857	splitline = list(filter(None,palmrunline.split(s)))
[2413]	858
	859	if ( len(splitline) == 1):
	860	splitline.append("")
	861	s = " -%s" % (id_str)
	862	newpalmrunline = s.join(splitline)
	863	newpalmrunline = newpalmrunline.replace(" "," ")
	864	commandline.setText(newpalmrunline)
	865
	866	# deletes flag in commandline
	867	####################################################################################
	868	def deactivate_flag(self, id_str):
[4670]	869	commandline = self.groupBox.findChild(QtWidgets.QLineEdit,"commandline")
[2413]	870	palmrunline = str(commandline.text())
	871	s = " -%s" % (id_str)
[4670]	872	splitline = list(filter(None,palmrunline.split(s)))
[2413]	873
	874	newpalmrunline = "".join(splitline)
	875	newpalmrunline = newpalmrunline.replace(" "," ")
	876	commandline.setText(newpalmrunline)
	877
	878	# Clears window
	879	#################################################################################
	880	def reset_window(self):
	881	self.setupUi(self)
	882	self.tabWidget.setCurrentIndex(0)
[4670]	883	self.palm_logo.setPixmap(QtGui.QPixmap(palm_dir + "/trunk/SCRIPTS/palmrungui_files/logo.png"))
[2477]	884	self.recent_jobs(50)
[4405]	885	self.load_jobs()
[2413]	886
[4470]	887
[2413]	888	# Safes current commandline and user parameters to default file
	889	################################################################################
	890	def save_default(self):
[4670]	891	string_to_file = self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").text()
	892
[4394]	893	filename ="%s/.palmrungui.default" % (palm_dir)
[2413]	894	tmstamp = strftime("%Y/%m/%d %H:%M")
[4670]	895
[2413]	896	file = open(filename,"w")
	897	s = "%s %s" % (tmstamp, string_to_file)
	898	file.write(s)
	899	file.close()
	900
	901
	902	# Executes command which starts watchdog (start palm_wd)
	903	########################################################
	904	def start_watchdog(self):
	905	subprocess.Popen(["nohup","palm_wd",">>","/dev/null", "2>&1","&"])
	906
	907	# Opens "help" dialog
	908	#################################
	909	def help(self):
	910	dialog = HelpDialog()
	911	dialog.exec_()
	912
	913	# Opens "about" dialog
	914	##################################
	915	def about_gui(self):
	916	dialog = AboutDialog()
	917	dialog.exec_()
	918
	919	# commandline to buttons etc
	920	##############################
	921	def setup_gui(self, palmrun_str):
[2484]	922
[4670]	923	#self.palm_logo.setPixmap(QtWidgets.QPixmap(palm_dir + "/trunk/SCRIPTS/palmrungui_files/logo.png"))
[2484]	924
[2413]	925	# Some initial settings
	926	coupled_run = False
	927	ocean_run = False
	928	nojob = False
	929
	930	#Split parameters in palmrunline
	931	splitline = palmrun_str.split(" -")
	932
	933	if ( splitline[0] != "palmrun"):
	934	return 1
	935
	936	else:
[4405]	937	self.group_execution.setEnabled(True)
[2413]	938
	939	# Loop for all parameters in palmrunline
	940	i = len(splitline)-1
	941	while i >= 1:
	942
	943	# Determine parameter
	944	splitparameter = splitline[i].split(" ")
	945
	946	parameter = splitparameter[0]
	947	splitparameter.pop(0)
	948	options = " ".join(splitparameter)
	949	options = options.replace("\"","")
	950
	951	# Check for suitable switch
[3487]	952	if ( parameter == "r"):
[2413]	953
	954	if ( options != ""):
[4670]	955	self.group_execution.findChild(QtWidgets.QLineEdit,"line_jobname").setText(options)
[2413]	956	nojob = False
	957
	958	else:
	959	nojob = True
	960
[3487]	961	elif ( parameter == "c"):
[4670]	962	tmpindex = self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").findText(options.strip(),QtCore.Qt.MatchExactly)
[4411]	963	if tmpindex != -1:
[4670]	964	self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").setCurrentIndex(tmpindex)
[4411]	965	else:
[4670]	966	self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").setCurrentIndex(0)
[2413]	967	elif ( parameter == "q"):
[4670]	968	self.group_execution.findChild(QtWidgets.QLineEdit,"line_q").setText(options)
[2413]	969
[2480]	970	elif ( parameter == "A"):
[4670]	971	self.group_execution.findChild(QtWidgets.QLineEdit,"line_account").setText(options)
[4789]	972
	973	elif ( parameter == "W"):
	974	self.group_execution.findChild(QtWidgets.QLineEdit,"line_wait").setText(options)
	975
[2413]	976	elif ( parameter == "X"):
[4670]	977	self.group_execution.findChild(QtWidgets.QLineEdit,"line_pe").setText(options)
[2413]	978
	979	elif ( parameter == "T"):
[4670]	980	self.group_execution.findChild(QtWidgets.QLineEdit,"line_tpn").setText(options)
[2413]	981
	982	elif ( parameter == "t"):
[4670]	983	self.group_execution.findChild(QtWidgets.QLineEdit,"line_time").setText(options)
[2413]	984
	985	elif ( parameter == "B"):
[4670]	986	self.group_execution.findChild(QtWidgets.QCheckBox,"check_delete_tmp_files").setChecked(True)
[2413]	987
	988	elif ( parameter == "v"):
[4789]	989	self.groupBox.findChild(QtWidgets.QCheckBox,"check_verbose").setChecked(True)
[2413]	990
	991	elif ( parameter == "b"):
[4670]	992	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_b").setChecked(True)
[2413]	993
	994	elif ( parameter == "F"):
[4670]	995	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_F").setChecked(True)
[2413]	996
	997	elif ( parameter == "I"):
[4670]	998	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_I").setChecked(True)
[2413]	999
	1000	elif ( parameter == "k"):
[4670]	1001	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_k").setChecked(True)
[2413]	1002
	1003	elif ( parameter == "O"):
[4670]	1004	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_O").setChecked(True)
	1005
	1006	elif ( parameter == "V"):
	1007	self.group_execution.findChild(QtWidgets.QCheckBox,"check_prebuilt").setChecked(True)
	1008
[2413]	1009	elif ( parameter == "x"):
[4670]	1010	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_x").setChecked(True)
	1011
[2413]	1012	elif ( parameter == "Z"):
[4670]	1013	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_Z").setChecked(True)
[2413]	1014
	1015	elif ( parameter == "m"):
[4670]	1016	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_m").setText(options)
[2413]	1017
	1018	elif ( parameter == "M"):
[4670]	1019	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_M").setText(options)
[2413]	1020
	1021	elif ( parameter == "D"):
[4670]	1022	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_D").setText(options)
[2413]	1023
	1024	elif ( parameter == "c"):
[4670]	1025	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_c").setText(options)
[2413]	1026
	1027	elif ( parameter == "s"):
[4670]	1028	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_s").setText(options)
[2413]	1029
	1030	elif ( parameter == "w"):
[4670]	1031	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_w").setText(options)
[2413]	1032
	1033
	1034	# Determine settings for coupled restart runs
	1035	elif ( parameter == "Y"):
	1036	optionssplit = options.split(" ")
	1037
[4670]	1038	group_coupled = self.group_execution.findChild(QtWidgets.QGroupBox,"group_coupled")
	1039	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos").setEnabled(True)
	1040	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean").setEnabled(True)
	1041	group_coupled.findChild(QtWidgets.QLabel,"label_coupled1").setEnabled(True)
	1042	group_coupled.findChild(QtWidgets.QLabel,"label_coupled2").setEnabled(True)
	1043	group_coupled.findChild(QtWidgets.QLabel,"label_coupled3").setEnabled(True)
	1044	group_coupled.findChild(QtWidgets.QLabel,"label_coupling").setEnabled(True)
[2413]	1045
	1046	if (optionssplit.count() == 2):
[4670]	1047	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos").setEnabled(optionssplit[0])
	1048	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean").setEnabled(optionssplit[1])
[2413]	1049
	1050	else:
[4670]	1051	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos").setText("")
	1052	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean").setText("")
[2413]	1053
	1054
	1055	coupled_run = True
	1056
	1057	elif ( parameter == "y"):
[4670]	1058	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setCurrentIndex(3)
[2413]	1059
	1060
	1061	# Determine settings for the run control list
	1062	elif ( parameter == "a"):
	1063
	1064	optionssplit = options.split(" ")
	1065
	1066	options_2 = None
	1067	options_all = None
	1068
	1069	j = 0
	1070	while j < len(optionssplit):
	1071
	1072	options_all = optionssplit[j]
	1073	options_2 = optionssplit[j][:2]
[2825]	1074
[2477]	1075	if (options_2 == "d3"):
	1076	if (options_all[:3][-1] == "#"):
[4670]	1077	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setCurrentIndex(0)
[2477]	1078	elif (options_all[:3][-1] == "r"):
[4670]	1079	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setCurrentIndex(1)
[2413]	1080
[2477]	1081	elif (options_all[:3][-1] == "o"):
[2413]	1082	ocean_run = True
	1083
	1084	if (options_all == "restart"):
[4670]	1085	self.group_execution.findChild(QtWidgets.QCheckBox,"check_restarts").setChecked(True)
[4470]	1086
[4789]	1087	if (options_all == "rec"):
	1088	self.group_execution.findChild(QtWidgets.QCheckBox,"check_cycfill").setChecked(True)
	1089
	1090	if (options_all == "svfin"):
	1091	self.group_execution.findChild(QtWidgets.QCheckBox,"check_svf").setChecked(True)
	1092
	1093	if (options_all == "svfout"):
	1094	self.group_execution.findChild(QtWidgets.QCheckBox,"check_svf_2").setChecked(True)
	1095
[2413]	1096	j = j+1
	1097	i = i-1
	1098	# Change drop box state in case of ocean precursor or coupled restart runs
	1099	if ( ocean_run == True ):
	1100	if ( coupled_run == True ):
[4670]	1101	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setCurrentIndex(4)
[2413]	1102
	1103	else:
[4670]	1104	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setCurrentIndex(3)
[2413]	1105
	1106	# Join palmrunline and post it to mainwindow
	1107	palmrunline = " -".join(splitline)
[4670]	1108	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(palmrunline)
[2413]	1109
	1110	# Disable mainwindow if no job was found, otherwise enable
	1111	if ( nojob == True ):
	1112	self.group_execution.setEnabled(False)
[4670]	1113	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(False)
	1114	self.menuBar.findChild(QtWidgets.QMenu,"menuStart").actions()[3].setEnabled(False)
	1115	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setEnabled(False)
[2413]	1116	self.group_advanced.setEnabled(False)
	1117	self.check_advanced.setEnabled(False)
[4670]	1118	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(False)
[2413]	1119
	1120	else:
	1121	self.group_execution.setEnabled(True)
[4670]	1122	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(True)
	1123	self.menuBar.findChild(QtWidgets.QMenu,"menuStart").actions()[3].setEnabled(True)
	1124	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setEnabled(True)
[2413]	1125	self.group_advanced.setEnabled(True)
[4670]	1126	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
[4470]	1127
	1128
[2413]	1129	self.tabWidget.setCurrentIndex(0)
[4470]	1130
	1131
	1132	## Open from history
	1133	###################################
[2413]	1134	def open_from_file(self):
	1135
[4470]	1136	# Show History
	1137	opt = OpenHistoryBox()
	1138	opt.exec_()
[4405]	1139
[4481]	1140	if ( history_entry != "" ):
	1141	palmrunline = str(history_entry)
	1142	palmrunline = palmrunline[17:]
	1143	palmrunline = palmrunline[:len(palmrunline)-1]
[4670]	1144	palmrunline = list(filter(None,palmrunline.split("(")))[0]
	1145	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(palmrunline)
[4470]	1146
[4481]	1147	# Set selected item to jobname in "available jobs" list
	1148	jobname = str(history_entry[17:])
[4670]	1149	jobname = list(filter(None,jobname.split(" -r")))[1]
[4481]	1150	jobname = jobname.strip()
[4670]	1151	jobname = list(filter(None,jobname.split(" ")))[0]
[4481]	1152	jobname = jobname.replace("\"","")
	1153	item2int = self.list_jobs.findItems(jobname,QtCore.Qt.MatchCaseSensitive)
[4470]	1154
[4481]	1155	if ( item2int != [] ):
	1156	self.list_jobs.setCurrentItem(item2int[0])
	1157	self.update_input()
[4470]	1158
[4481]	1159	# Add tooltip tag
	1160	tag = str(history_entry).split('\n')[0]
[4670]	1161	tag = list(filter(None,tag.split("(")))[1]
[4481]	1162	tag = tag.replace(")","")
[4670]	1163	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setText(tag)
[4405]	1164
[4481]	1165	# Process palmrungui to set up gui controls
	1166	self.setup_gui(palmrunline)
[4470]	1167
	1168
[4405]	1169	def update_all(self):
	1170
	1171	self.setEnabled(False)
	1172	self.list_input.clear()
	1173	self.list_user.clear()
	1174	self.list_monitoring.clear()
	1175	self.list_output.clear()
	1176	self.load_jobs()
	1177	self.setEnabled(True)
[4427]	1178	self.update_input()
[4405]	1179
[4470]	1180
[4405]	1181	# Load jobs into list
	1182	def load_jobs(self):
	1183
[4427]	1184	selected_job = self.list_jobs.currentItem()
	1185
	1186	if ( selected_job is not None ):
	1187	jobname = selected_job.text()
	1188	else:
	1189	jobname = ""
	1190
[4405]	1191	self.list_jobs.clear()
	1192	self.line_path.setText(job_dir + "/")
	1193
	1194	list_of_files = os.listdir(job_dir)
[4411]	1195
	1196
[4405]	1197	for i in range(0,len(list_of_files)):
	1198	tmp_file = job_dir + "/" + list_of_files[i]
	1199
	1200	if ( os.path.isdir(tmp_file) ):
[4411]	1201	self.list_jobs.addItem(str(list_of_files[i]))
	1202
[4405]	1203
	1204
[4427]	1205	item2int = self.list_jobs.findItems(jobname,QtCore.Qt.MatchCaseSensitive)
	1206
	1207	if ( item2int != [] ):
	1208	self.list_jobs.setCurrentItem(item2int[0])
	1209
	1210
[4405]	1211	# Update input and user code lists
	1212	def update_input(self):
[4470]	1213
	1214	self.labeltimer.stop()
	1215
[4405]	1216
	1217	self.list_input.clear()
	1218	self.list_user.clear()
	1219	self.list_monitoring.clear()
	1220	self.list_output.clear()
[4428]	1221
	1222	jobitem = self.list_jobs.currentItem()
	1223
	1224	if ( jobitem != None ):
	1225
	1226	job_to_show = job_dir + "/" + jobitem.text() + "/INPUT"
[4405]	1227
[4428]	1228	if ( os.path.isdir(job_to_show) ):
[4405]	1229
[4428]	1230	list_of_files = os.listdir(job_to_show)
[4405]	1231
[4428]	1232	for i in range(0,len(list_of_files)):
	1233	tmp_file = job_to_show + "/" + list_of_files[i]
[4405]	1234
[4428]	1235	if ( os.path.isfile(tmp_file) ):
[4470]	1236	self.list_input.addItem(str(list_of_files[i]) + " (" + file_size(tmp_file) + ")")
[4405]	1237
[4428]	1238	job_to_show = job_dir + "/" + jobitem.text() + "/USER_CODE"
[4405]	1239
[4428]	1240	if ( os.path.isdir(job_to_show) ):
[4405]	1241
[4428]	1242	list_of_files = os.listdir(job_to_show)
[4405]	1243
[4428]	1244	for i in range(0,len(list_of_files)):
	1245	tmp_file = job_to_show + "/" + list_of_files[i]
[4405]	1246
[4428]	1247	if ( os.path.isfile(tmp_file) ):
	1248	self.list_user.addItem(str(list_of_files[i]))
[4405]	1249
[4428]	1250	job_to_show = job_dir + "/" + jobitem.text() + "/MONITORING"
[4405]	1251
[4428]	1252	if ( os.path.isdir(job_to_show) ):
[4405]	1253
[4428]	1254	list_of_files = os.listdir(job_to_show)
[4405]	1255
[4428]	1256	for i in range(0,len(list_of_files)):
	1257	tmp_file = job_to_show + "/" + list_of_files[i]
[4405]	1258
[4428]	1259	if ( os.path.isfile(tmp_file) ):
[4470]	1260	self.list_monitoring.addItem(str(list_of_files[i]) + " (" + file_size(tmp_file) + ")")
[4405]	1261
[4428]	1262	job_to_show = job_dir + "/" + jobitem.text() + "/OUTPUT"
	1263
	1264	if ( os.path.isdir(job_to_show) ):
[4470]	1265
[4428]	1266	list_of_files = os.listdir(job_to_show)
[4470]	1267
[4428]	1268	for i in range(0,len(list_of_files)):
	1269	tmp_file = job_to_show + "/" + list_of_files[i]
[4405]	1270
[4428]	1271	if ( os.path.isfile(tmp_file) ):
[4470]	1272	self.list_output.addItem(str(list_of_files[i]) + " (" + file_size(tmp_file) + ")")
[4405]	1273
[4670]	1274	self.group_execution.findChild(QtWidgets.QLineEdit,"line_jobname").setText(jobitem.text())
	1275	self.group_history.findChild(QtWidgets.QListWidget,"list_jobname").clearSelection()
[4405]	1276
[4470]	1277	self.timetimer.start()
	1278	self.timer.start(update_frequency)
	1279	self.labeltimer.start(update_frequency/10)
	1280	self.push_update.setText("Update (" + str(int(update_frequency/1000/60)) + " min)")
[4670]	1281	QtWidgets.QApplication.processEvents()
[4470]	1282
[4405]	1283	# Change palmrunline accordingly
	1284	self.change_commandline("r","")
[4470]	1285	self.change_commandline("a","")
	1286
[4482]	1287	# Create a new (empty) job
	1288	def create_new_job(self):
	1289
	1290	self.setEnabled(False)
	1291
[4670]	1292	text, ret = QtWidgets.QInputDialog.getText(self, "Create new job", "Enter new job name:", QtWidgets.QLineEdit.Normal, text = '')
[4482]	1293
	1294	if ( ret ):
	1295	new_job_name = str(text)
	1296	else:
	1297	self.setEnabled(True)
	1298	return
	1299
	1300	new_input_dir = job_dir + "/" + new_job_name + "/INPUT"
	1301
	1302	# check if a job exists with the new job name. If not, the new job is created and an empty _p3d file is created.
	1303	if ( os.path.isdir(new_input_dir) ):
[4670]	1304	notify = QtWidgets.QMessageBox.warning(self,'Create new job directory',"Error. Could not create job directory. A job with the new name already exists.")
[4482]	1305	self.setEnabled(True)
	1306	return
	1307	else:
	1308	os.makedirs(new_input_dir)
	1309	os.mknod(new_input_dir + '/' + new_job_name + '_p3d')
	1310
	1311	# write default namelists into _p3d file
	1312	filename = open(new_input_dir + '/' + new_job_name + '_p3d', "w")
	1313	filename.write('&initialization_parameters\n nx = 39,\n ny = 39,\n nz = 40,\n dx = 50.0,\n dy = 50.0,\n dz = 50.0,\n/\n\n')
	1314	filename.write('&runtime_parameters\n end_time = 3600.0,\n/\n')
	1315	filename.close()
	1316
	1317
	1318	# create empty USER_CODE folder for convenience
	1319	new_user_dir = job_dir + "/" + new_job_name + "/USER_CODE"
	1320	os.makedirs(new_user_dir)
	1321
	1322
	1323	self.load_jobs()
	1324	self.list_input.clear()
	1325	self.list_user.clear()
	1326	self.list_monitoring.clear()
	1327	self.list_output.clear()
	1328	self.setEnabled(True)
	1329
	1330
[4405]	1331	# Make a copy of a job
	1332	def copy_job(self):
[4670]	1333
[4405]	1334	self.setEnabled(False)
	1335	old_job_name = self.list_jobs.currentItem().text()
	1336
[4670]	1337	text, ret = QtWidgets.QInputDialog.getText(self, "Copy job", "Enter new job name:", QtWidgets.QLineEdit.Normal, text = old_job_name)
[4405]	1338	if ( ret ):
	1339	new_job_name = str(text)
	1340	else:
[4670]	1341	self.setEnabled(True)
	1342	return
	1343
[4405]	1344	new_input_dir = job_dir + "/" + new_job_name + "/INPUT"
	1345
	1346	# check if a job exists with the new job name
	1347	if ( os.path.isdir(new_input_dir) ):
[4670]	1348	notify = QtWidgets.QMessageBox.warning(self,'Create new job directory',"Error. Could not create job directory. A job with the new name already exists.")
	1349	self.setEnabled(True)
	1350	return
[4405]	1351	else:
[4670]	1352	os.makedirs(new_input_dir)
[4405]	1353
	1354	# copy and rename input files (if present)
	1355	job_to_copy = job_dir + "/" + old_job_name + "/INPUT"
	1356
	1357	if ( os.path.isdir(job_to_copy) ):
	1358
	1359	list_of_files = os.listdir(job_to_copy)
[4482]	1360
[4405]	1361	for i in range(0,len(list_of_files)):
	1362
	1363	tmp_file = job_to_copy + "/" + list_of_files[i]
	1364	new_file = new_input_dir + "/" + list_of_files[i].replace(old_job_name, new_job_name)
	1365	shutil.copy(tmp_file, new_file)
	1366
	1367
	1368
	1369
	1370	new_user_dir = job_dir + "/" + new_job_name + "/USER_CODE"
[4482]	1371
[4405]	1372	# check if user code exists in the new job directory
	1373	if ( os.path.isdir(new_user_dir) ):
[4670]	1374	notify = QtWidgets.QMessageBox.warning(self,'Create new user code directory',"Error. Could not create user code directory. A user code directiory with the new name already exists.")
	1375	self.setEnabled(True)
	1376	return
[4405]	1377	else:
[4670]	1378	os.makedirs(new_user_dir)
[4405]	1379
	1380
	1381	# copy user code files (if present)
	1382	user_to_copy = job_dir + "/" + old_job_name + "/USER_CODE"
	1383
	1384	if ( os.path.isdir(user_to_copy) ):
	1385
	1386	list_of_files = os.listdir(user_to_copy)
	1387
	1388	for i in range(0,len(list_of_files)):
	1389
	1390	tmp_file = user_to_copy + "/" + list_of_files[i]
	1391	new_file = new_user_dir + "/" + list_of_files[i]
	1392	shutil.copy(tmp_file, new_file)
	1393
	1394	self.load_jobs()
	1395	self.list_input.clear()
	1396	self.list_user.clear()
	1397	self.list_monitoring.clear()
	1398	self.list_output.clear()
	1399	self.setEnabled(True)
	1400
	1401
	1402	# Create a whole set of jobs
	1403	def create_set(self):
	1404
	1405	global set_list
	1406	# disable mainwindow
	1407	self.setEnabled(False)
	1408
	1409	# show Options Dialog
	1410	opt = CreateSetBox()
	1411	opt.exec_()
	1412
	1413	old_job_name = self.list_jobs.currentItem().text()
	1414
	1415	for j in range(0,len(set_list)):
	1416
	1417	if ( set_list[j] != "" ):
	1418	new_job_name = str(set_list[j])
	1419	new_input_dir = job_dir + "/" + str(set_list[j]) + "/INPUT"
	1420	else:
	1421	continue
	1422
	1423	# check if a job exists with the new job name
	1424	if ( os.path.isdir(new_input_dir) ):
[4670]	1425	notify = QtWidgets.QMessageBox.warning(self,'Create new job directory',"Error. Could not create job directory. A job with the new name already exists.")
[4405]	1426	self.setEnabled(True)
	1427	return
	1428	else:
	1429	os.makedirs(new_input_dir)
	1430
	1431	# copy and rename input files (if present)
	1432	job_to_copy = job_dir + "/" + old_job_name + "/INPUT"
	1433
	1434	if ( os.path.isdir(job_to_copy) ):
	1435
	1436	list_of_files = os.listdir(job_to_copy)
	1437
	1438	for i in range(0,len(list_of_files)):
	1439
	1440	tmp_file = job_to_copy + "/" + list_of_files[i]
	1441	new_file = new_input_dir + "/" + list_of_files[i].replace(old_job_name, new_job_name)
	1442	shutil.copy(tmp_file, new_file)
	1443
	1444
	1445	new_user_dir = job_dir + "/" + new_job_name + "/USER_CODE"
[4670]	1446
[4405]	1447	# check if user code exists in the new job directory
	1448	if ( os.path.isdir(new_user_dir) ):
[4670]	1449	notify = QtWidgets.QMessageBox.warning(self,'Create new user code directory',"Error. Could not create user code directory. A user code directiory with the new name already exists.")
	1450	self.setEnabled(True)
	1451	return
[4405]	1452	else:
[4670]	1453	os.makedirs(new_user_dir)
[4405]	1454
	1455
	1456	# copy user code files (if present)
	1457	user_to_copy = job_dir + "/" + old_job_name + "/USER_CODE"
	1458
	1459	if ( os.path.isdir(user_to_copy) ):
	1460
	1461	list_of_files = os.listdir(user_to_copy)
	1462
	1463	for i in range(0,len(list_of_files)):
	1464
	1465	tmp_file = user_to_copy + "/" + list_of_files[i]
	1466	new_file = new_user_dir + "/" + list_of_files[i]
	1467	shutil.copy(tmp_file, new_file)
	1468
	1469	self.load_jobs()
	1470	self.list_input.clear()
	1471	self.list_user.clear()
	1472	self.list_monitoring.clear()
	1473	self.list_output.clear()
	1474
	1475	self.setEnabled(True)
	1476	set_list = []
[4470]	1477
	1478
	1479	# Add a custom context menu for the job selection list
	1480	def openmenujob(self, position):
	1481
[4670]	1482	menu = QtWidgets.QMenu()
[4470]	1483
[4482]	1484
[4670]	1485	newAction = QtWidgets.QAction('Create new job', self)
[4482]	1486	newAction.triggered.connect(self.create_new_job)
	1487	menu.addAction(newAction)
[4470]	1488	selection = self.list_jobs.selectedItems()
	1489
	1490	if ( len(selection) != 0 ):
	1491
[4482]	1492
[4670]	1493	copyAction = QtWidgets.QAction('Copy job', self)
[4470]	1494	copyAction.triggered.connect(self.copy_job)
[4670]	1495	createAction = QtWidgets.QAction('Create set from job', self)
[4470]	1496	createAction.triggered.connect(self.create_set)
[4670]	1497	delAction = QtWidgets.QAction('Delete job', self)
[4470]	1498	delAction.triggered.connect(self.DeleteJob)
	1499
	1500	menu.addAction(copyAction)
	1501	menu.addAction(createAction)
	1502	menu.addAction(delAction)
	1503
[4482]	1504	action = menu.exec_(self.list_jobs.mapToGlobal(position))
	1505
[4405]	1506	# Add a custom context menu
	1507	def openmenuinput(self, position):
	1508
[4670]	1509	menu = QtWidgets.QMenu()
[4405]	1510
	1511	selection = self.list_input.selectedItems()
[2413]	1512
[4405]	1513	if ( len(selection) != 0 ):
[2413]	1514
[4470]	1515
[4670]	1516	openAction = QtWidgets.QAction('Open file(s)', self)
[4405]	1517	openAction.setStatusTip('Open file(s) in your favorite editor')
	1518	openAction.triggered.connect(self.OpenFilesInput)
[4470]	1519
	1520
[4670]	1521	delAction = QtWidgets.QAction('Delete selected file(s)', self)
[4470]	1522	delAction.triggered.connect(self.DeleteFilesInput)
	1523
	1524	menu.addAction(openAction)
	1525	menu.addAction(delAction)
	1526
[4670]	1527	delallAction = QtWidgets.QAction('Delete all files', self)
[4482]	1528	delallAction.triggered.connect(self.DeleteAllFilesInput)
	1529	menu.addAction(delallAction)
[4405]	1530
[4482]	1531	action = menu.exec_(self.list_input.mapToGlobal(position))
	1532
[4405]	1533	# Add a custom context menu
	1534	def openmenuuser(self, position):
	1535
[4670]	1536	menu = QtWidgets.QMenu()
[4405]	1537
	1538	selection = self.list_user.selectedItems()
	1539
	1540	if ( len(selection) != 0 ):
	1541
[4670]	1542	openAction = QtWidgets.QAction('Open file(s)', self)
[4405]	1543	openAction.setStatusTip('Open file(s) in your favorite editor')
	1544	openAction.triggered.connect(self.OpenFilesUser)
[4470]	1545
	1546
[4670]	1547	delAction = QtWidgets.QAction('Delete file(s)', self)
[4470]	1548	delAction.triggered.connect(self.DeleteFilesUser)
	1549
	1550	menu.addAction(openAction)
	1551	menu.addAction(delAction)
[4405]	1552
[4670]	1553	delallAction = QtWidgets.QAction('Delete all files', self)
[4482]	1554	delallAction.triggered.connect(self.DeleteAllFilesUser)
	1555	menu.addAction(delallAction)
	1556
	1557	action = menu.exec_(self.list_user.mapToGlobal(position))
	1558
[4405]	1559	# Add a custom context menu
	1560	def openmenuoutput(self, position):
	1561
[4670]	1562	menu = QtWidgets.QMenu()
[4405]	1563
	1564	selection = self.list_output.selectedItems()
[4482]	1565
[4405]	1566	if ( len(selection) != 0 ):
	1567
[4670]	1568	openAction = QtWidgets.QAction('Open file(s)', self)
[4405]	1569	openAction.setStatusTip('Open file(s) in your favorite editor')
	1570	openAction.triggered.connect(self.OpenFilesOutput)
[4470]	1571
[4670]	1572	delAction = QtWidgets.QAction('Delete file(s)', self)
[4470]	1573	delAction.triggered.connect(self.DeleteFilesOutput)
	1574
[4482]	1575
	1576
[4470]	1577	menu.addAction(openAction)
	1578	menu.addAction(delAction)
[4405]	1579
[4670]	1580	delallAction = QtWidgets.QAction('Delete all files', self)
[4482]	1581	delallAction.triggered.connect(self.DeleteAllFilesOutput)
	1582	menu.addAction(delallAction)
	1583
	1584	action = menu.exec_(self.list_output.mapToGlobal(position))
	1585
[4405]	1586	# Add a custom context menu
	1587	def openmenumonitoring(self, position):
	1588
[4670]	1589	menu = QtWidgets.QMenu()
[4405]	1590
	1591	selection = self.list_monitoring.selectedItems()
	1592
	1593	if ( len(selection) != 0 ):
	1594
[4670]	1595	openAction = QtWidgets.QAction('Open file(s)', self)
[4405]	1596	openAction.setStatusTip('Open file(s) in your favorite editor')
	1597	openAction.triggered.connect(self.OpenFilesMonitoring)
[4470]	1598
[4670]	1599	delAction = QtWidgets.QAction('Delete file(s)', self)
[4470]	1600	delAction.triggered.connect(self.DeleteFilesMonitoring)
	1601
[4482]	1602
	1603
[4470]	1604	menu.addAction(openAction)
	1605	menu.addAction(delAction)
[4405]	1606
[4670]	1607	delallAction = QtWidgets.QAction('Delete all files', self)
[4482]	1608	delallAction.triggered.connect(self.DeleteAllFilesMonitoring)
	1609	menu.addAction(delallAction)
	1610
	1611	action = menu.exec_(self.list_monitoring.mapToGlobal(position))
	1612
[4470]	1613	def OpenConfig(self):
	1614
[4670]	1615	config = str(self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").currentText())
[4470]	1616	if ( config != "" ):
	1617	filename = ".palm.config." + config
	1618	open_file = "xdg-open " + filename
	1619	os.system(str(open_file))
	1620
[4405]	1621	def OpenFilesInput(self):
	1622
	1623	sel_job = self.list_jobs.currentItem().text()
	1624	sel_files = self.list_input.selectedItems()
	1625
	1626	input_dir = job_dir + "/" + sel_job + "/INPUT/"
	1627
	1628	open_files = ""
	1629	for i in range(0,len(sel_files)):
[4470]	1630	open_files = open_files + "xdg-open " + input_dir + sel_files[i].text().split("(")[0] + "; "
[4405]	1631
	1632	os.system(str(open_files))
	1633
	1634	def OpenFilesUser(self):
	1635
	1636	sel_job = self.list_jobs.currentItem().text()
	1637	sel_files = self.list_user.selectedItems()
	1638
	1639	input_dir = job_dir + "/" + sel_job + "/USER_CODE/"
	1640
	1641	open_files = ""
	1642	for i in range(0,len(sel_files)):
	1643	open_files = open_files + "xdg-open " + input_dir + sel_files[i].text() + "; "
	1644
	1645	os.system(str(open_files))
	1646	selection = self.list_jobs.selectedItems()
	1647
	1648	def OpenFilesMonitoring(self):
	1649
	1650	sel_job = self.list_jobs.currentItem().text()
	1651	sel_files = self.list_monitoring.selectedItems()
	1652
	1653	input_dir = job_dir + "/" + sel_job + "/MONITORING/"
	1654
	1655	open_files = ""
	1656	for i in range(0,len(sel_files)):
[4470]	1657	open_files = open_files + "xdg-open " + input_dir + sel_files[i].text().split("(")[0] + "; "
[4405]	1658
	1659	os.system(str(open_files))
	1660	selection = self.list_jobs.selectedItems()
	1661
	1662	def OpenFilesOutput(self):
	1663
	1664	sel_job = self.list_jobs.currentItem().text()
	1665	sel_files = self.list_output.selectedItems()
	1666
	1667	input_dir = job_dir + "/" + sel_job + "/OUTPUT/"
	1668
	1669	open_files = ""
	1670	for i in range(0,len(sel_files)):
[4470]	1671	open_files = open_files + "xdg-open " + input_dir + sel_files[i].text().split("(")[0] + "; "
[4405]	1672
	1673	os.system(str(open_files))
	1674	selection = self.list_jobs.selectedItems()
[4470]	1675
	1676	def DeleteFilesInput(self):
	1677
[4670]	1678	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete these files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1679
[4670]	1680	if status == QtWidgets.QMessageBox.Yes:
[4470]	1681
	1682	sel_job = self.list_jobs.currentItem().text()
	1683	sel_files = self.list_input.selectedItems()
	1684
	1685	input_dir = job_dir + "/" + sel_job + "/INPUT/"
	1686
	1687	for i in range(0,len(sel_files)):
[4670]	1688	filename = input_dir + sel_files[i].text().split("(")[0].strip()
[4470]	1689	os.remove(filename)
	1690
	1691	self.update_all()
	1692
	1693
	1694	def DeleteFilesUser(self):
	1695
[4670]	1696	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete these files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1697
[4670]	1698	if status == QtWidgets.QMessageBox.Yes:
[4470]	1699
	1700	sel_job = self.list_jobs.currentItem().text()
	1701	sel_files = self.list_user.selectedItems()
	1702
[4481]	1703	input_dir = job_dir + "/" + sel_job + "/USER_CODE/"
[4470]	1704
	1705	for i in range(0,len(sel_files)):
[4670]	1706	filename = input_dir + sel_files[i].text().split("(")[0].strip()
[4470]	1707	os.remove(filename)
	1708
	1709	self.update_all()
	1710
	1711
	1712	def DeleteFilesMonitoring(self):
	1713
[4670]	1714	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete these files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1715
[4670]	1716	if status == QtWidgets.QMessageBox.Yes:
[4470]	1717
	1718	sel_job = self.list_jobs.currentItem().text()
	1719	sel_files = self.list_monitoring.selectedItems()
	1720
	1721	input_dir = job_dir + "/" + sel_job + "/MONITORING/"
	1722
	1723	for i in range(0,len(sel_files)):
[4670]	1724	filename = input_dir + sel_files[i].text().split("(")[0].strip()
[4470]	1725	os.remove(filename)
	1726
	1727	self.update_all()
	1728
	1729
	1730	def DeleteFilesOutput(self):
	1731
[4670]	1732	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete these files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1733
[4670]	1734	if status == QtWidgets.QMessageBox.Yes:
[4470]	1735
	1736	sel_job = self.list_jobs.currentItem().text()
	1737	sel_files = self.list_output.selectedItems()
	1738
	1739	input_dir = job_dir + "/" + sel_job + "/OUTPUT/"
	1740
	1741	for i in range(0,len(sel_files)):
[4670]	1742	filename = input_dir + sel_files[i].text().split("(")[0].strip()
[4470]	1743	os.remove(filename)
	1744
	1745	self.update_all()
	1746
[4482]	1747
	1748	def DeleteAllFilesInput(self):
	1749
[4670]	1750	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete all files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4482]	1751
[4670]	1752	if status == QtWidgets.QMessageBox.Yes:
[4482]	1753
	1754	check = self.list_jobs.currentItem()
	1755	if ( check ):
	1756	sel_job = self.list_jobs.currentItem().text()
	1757	sel_files = self.list_input.selectedItems()
	1758
	1759	input_dir = job_dir + "/" + sel_job + "/INPUT/"
	1760
	1761	if os.path.exists(str(input_dir)):
	1762	shutil.rmtree(str(input_dir))
	1763	os.makedirs(str(input_dir))
	1764
	1765	self.update_all()
	1766
	1767
	1768	def DeleteAllFilesUser(self):
	1769
[4670]	1770	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete all files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4482]	1771
[4670]	1772	if status == QtWidgets.QMessageBox.Yes:
[4482]	1773
	1774	check = self.list_jobs.currentItem()
	1775	if ( check ):
	1776	sel_job = self.list_jobs.currentItem().text()
	1777	sel_files = self.list_input.selectedItems()
	1778
	1779	input_dir = job_dir + "/" + sel_job + "/USER_CODE/"
	1780
	1781	if os.path.exists(str(input_dir)):
	1782	shutil.rmtree(str(input_dir))
	1783	os.makedirs(str(input_dir))
	1784
	1785	self.update_all()
	1786
	1787
	1788
	1789	def DeleteAllFilesOutput(self):
	1790
[4670]	1791	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete all files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4482]	1792
[4670]	1793	if status == QtWidgets.QMessageBox.Yes:
[4482]	1794
	1795	check = self.list_jobs.currentItem()
	1796	if ( check ):
	1797	sel_job = self.list_jobs.currentItem().text()
	1798	sel_files = self.list_input.selectedItems()
	1799
	1800	input_dir = job_dir + "/" + sel_job + "/OUTPUT/"
	1801
	1802	if os.path.exists(str(input_dir)):
	1803	shutil.rmtree(str(input_dir))
	1804	os.makedirs(str(input_dir))
	1805
	1806	self.update_all()
	1807
	1808
	1809
	1810	def DeleteAllFilesMonitoring(self):
	1811
[4670]	1812	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete all files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4482]	1813
[4670]	1814	if status == QtWidgets.QMessageBox.Yes:
[4482]	1815
	1816	check = self.list_jobs.currentItem()
	1817	if ( check ):
	1818	sel_job = self.list_jobs.currentItem().text()
	1819	sel_files = self.list_input.selectedItems()
	1820
	1821	input_dir = job_dir + "/" + sel_job + "/MONITORING/"
	1822
	1823	if os.path.exists(str(input_dir)):
	1824	shutil.rmtree(str(input_dir))
	1825	os.makedirs(str(input_dir))
	1826
	1827	self.update_all()
	1828
	1829
	1830
[4470]	1831	def DeleteJob(self):
	1832
[4670]	1833	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete this job?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1834
[4670]	1835	if status == QtWidgets.QMessageBox.Yes:
[4470]	1836
	1837	sel_job = self.list_jobs.currentItem().text()
	1838
	1839	input_dir = job_dir + "/" + sel_job
	1840	shutil.rmtree(str(input_dir))
	1841
	1842	self.update_all()
	1843
[4405]	1844	# Message box for showing RUN_CONTROL output
[4670]	1845	class CreateSetBox(QtWidgets.QDialog):
[4405]	1846	def __init__(self):
[4470]	1847
[4405]	1848	super(CreateSetBox, self).__init__()
[4470]	1849
[4405]	1850	uic.loadUi(palm_bin + '/palmrungui_files/create_set.ui', self)
[4470]	1851
[4405]	1852	self.show()
[4470]	1853
[4405]	1854	return
	1855
	1856	# Cancel button
	1857	def rejected(self):
[4470]	1858
[4405]	1859	self.close()
[4470]	1860
[4405]	1861	return
	1862
	1863	# OK button
	1864	def accept(self):
[4470]	1865
[4405]	1866	global set_list
[4470]	1867
[4405]	1868	text = self.list.toPlainText()
	1869	set_list = text.split('\n')
	1870	self.close()
[4470]	1871
[4405]	1872	return
	1873
[4470]	1874	# Message box for showing RUN_CONTROL output
[4670]	1875	class OpenHistoryBox(QtWidgets.QDialog):
[4470]	1876	def __init__(self):
[4405]	1877
[4470]	1878	super(OpenHistoryBox, self).__init__()
[4405]	1879
[4470]	1880	uic.loadUi(palm_bin + '/palmrungui_files/history.ui', self)
	1881
	1882	if os.path.exists(palm_dir + "/.palmrungui.history"):
	1883	pass
	1884	else:
	1885	return
	1886
	1887	filename = open(palm_dir + "/.palmrungui.history","r")
	1888	history = filename.readlines()
	1889	filename.close()
	1890
	1891
[4670]	1892	list_jobname = self.findChild(QtWidgets.QListWidget,"list_history")
[4470]	1893
	1894	# Read history entries and append to recent job list
	1895	len_history=len(history)-1
	1896	i = 0
	1897	while i<=len_history:
	1898	list_jobname.addItem(history[i])
	1899	i = i + 1
	1900
	1901	self.show()
	1902
	1903	return
	1904
	1905	# Select item / activate Load button
	1906	def ItemSelected(self):
	1907
	1908	self.push_open.setEnabled(True)
	1909
	1910	return
	1911
	1912
	1913	# Load job from history
	1914	def OpenFromHistory(self):
	1915
	1916	global history_entry
	1917	history_entry = self.list_history.selectedItems()[0].text()
	1918
	1919	self.close()
	1920
	1921	return
	1922
	1923	# Close history window
	1924	def DiscardHistory(self):
	1925
[4481]	1926	global history_entry
	1927	history_entry = ""
[4470]	1928	self.close()
	1929
	1930	return
	1931
	1932	# Clear history
	1933	def ClearHistory(self):
	1934
[4670]	1935	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete your history?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1936
[4670]	1937	if status == QtWidgets.QMessageBox.Yes:
[4470]	1938
	1939	if os.path.exists(palm_dir + "/.palmrungui.history"):
	1940	os.remove(palm_dir + "/.palmrungui.history")
	1941
	1942
	1943	return
	1944
[2413]	1945	if __name__ == "__main__":
[4670]	1946	app = QtWidgets.QApplication(sys.argv)
[2413]	1947	window = Mainwindow()
	1948	window.show()
[2825]	1949	sys.exit(app.exec_())

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