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source: palm/trunk/SCRIPTS/palmrungui @ 4719

Last change on this file since 4719 was 4670, checked in by maronga, 4 years ago
ported palmrungui to pyqt5; several minor bugfixes in palmrungui
Property svn:executable set to ``* Property svn:keywords set to `Id`
File size: 70.0 KB

Rev	Line
[4670]	1	#!/usr/bin/env python3
[2413]	2	# -- coding: utf-8 --
	3	#--------------------------------------------------------------------------------#
[2696]	4	# This file is part of the PALM model system.
[2413]	5	#
	6	# PALM is free software: you can redistribute it and/or modify it under the terms
	7	# of the GNU General Public License as published by the Free Software Foundation,
	8	# either version 3 of the License, or (at your option) any later version.
	9	#
	10	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
	11	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
	12	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
	13	#
	14	# You should have received a copy of the GNU General Public License along with
	15	# PALM. If not, see <http://www.gnu.org/licenses/>.
	16	#
[4481]	17	# Copyright 1997-2020 Leibniz Universitaet Hannover
[2413]	18	#--------------------------------------------------------------------------------#
	19	#
	20	# Current revisions:
	21	# -----------------
	22	#
	23	#
	24	# Former revisions:
	25	# -----------------
	26	# $Id: palmrungui 4670 2020-09-09 17:27:45Z pavelkrc $
[4670]	27	# Ported to PyQt5, removed support for user parameters. Added support for Option
	28	# "-V" (do not re-build pre-built source code). Changed activation strings
	29	# according to default .palm.iofiles (svfin/svfout/rec)
	30	#
	31	# 4482 2020-04-01 13:17:50Z maronga
[4482]	32	# Added possibility to delete all files in a directory and option to create
	33	# blank new jobs
	34	#
	35	# 4481 2020-03-31 18:55:54Z maronga
[4481]	36	# Bugfixes: - reading history lines discard button caused error message
	37	# - deleting of USER_CODE files did not work
	38	#
	39	# 4470 2020-03-24 06:52:19Z maronga
[4470]	40	# Added file size output, more I/O functionalities, new/removed buttons
	41	#
	42	# 4428 2020-02-27 11:43:53Z maronga
[4428]	43	# Bugfix for update button
	44	#
	45	# 4427 2020-02-27 11:29:51Z maronga
[4427]	46	# Small fixes and adjustments
	47	#
	48	# 4420 2020-02-24 14:13:56Z maronga
[4420]	49	# Bugfix: minor fixes related to start buttons
	50	#
	51	# 4411 2020-02-18 14:28:02Z maronga
[4411]	52	# Added new features: individual tag for submitted runs, automatic finding of
	53	# configuration, start of palmbuild from GUI
	54	#
	55	# 4405 2020-02-12 19:11:11Z maronga
[4405]	56	# Major revisions: New layout. Merged with palm job manager (palm_jm).
	57	# Minor revisions: Misc. bugs fixed.
	58	#
	59	# 4394 2020-02-04 21:40:38Z maronga
[4394]	60	# Bugfix: harmonized naming convention of configuration files
	61	#
	62	# 4393 2020-02-04 21:24:48Z maronga
[4393]	63	# Removed PALM_BIN dependency and os calls
	64	#
	65	# 3487 2018-11-05 07:18:02Z maronga
[3487]	66	# Renamed options -d and -h to -r and -c.
	67	#
	68	# 2825 2018-02-20 21:48:27Z maronga
[2825]	69	# Adjusted to work with newest version of palmrun
	70	#
	71	# 2718 2018-01-02 08:49:38Z maronga
[2716]	72	# Corrected "Former revisions" section
	73	#
	74	# 2696 2017-12-14 17:12:51Z kanani
	75	# Change in file header (GPL part)
	76	#
	77	# 2484 2017-09-20 14:22:42Z maronga
[2484]	78	# Added PALM logo
	79	#
	80	# 2480 2017-09-19 06:24:14Z maronga
[2480]	81	# option -A (project account number) added
	82	#
	83	# 2477 2017-09-18 08:42:29Z maronga
[2477]	84	# Renamed restart run appendix from "f" to "r". Bugfix for displaying restart runs.>
	85	# Revised list of recently submitted jobs
	86	#
	87	# 2413 2017-09-06 12:48:29Z maronga
[2413]	88	# Renamed to palmrungui and adapted for use with palmrun instead of mrun.
	89	#
	90	# 2316 2017-07-20 07:53:42Z maronga
	91	# Initial revision in python
	92	#
	93	#
	94	#
	95	# Description:
	96	# ------------
	97	# Graphical user interface for the palmrun script.
	98	# @author Felix Gaschler
	99	# @author BjÃ¶rn Maronga (maronga@muk.uni-hannover.de)
	100	#
	101	# Instructions:
	102	# -------------
	103	#
	104	#------------------------------------------------------------------------------!
	105	import sys
	106	import subprocess
[4670]	107	from PyQt5 import QtCore, QtGui, uic, QtWidgets
	108	from PyQt5.QtWidgets import QMainWindow, QApplication
	109	from PyQt5.QtCore import QProcess, pyqtSlot, QTimer
[2413]	110	from time import strftime
	111	import os
[4405]	112	import shutil
[2413]	113
[4470]	114	global update_frequency
	115	update_frequency = 5*60000
[2413]	116
	117	# Determine PALM directories
	118	try:
[4393]	119	devnull = open(os.devnull, 'w')
	120	palm_dir = os.getcwd()
	121	palm_bin = palm_dir + '/trunk/SCRIPTS'
[4470]	122	palm_source = palm_dir + '/trunk/SOURCE'
[4393]	123	job_dir = palm_dir + '/JOBS'
	124	user_dir = palm_dir + '/USER_CODE'
[4670]	125	with open(palm_bin + '/palmrungui', 'r', encoding='utf8') as fh:
[4393]	126	# file found
	127	out = None
[2413]	128	except:
[4670]	129	print ("Error. palmrungui probably called in wrong directory.")
[2413]	130	raise SystemExit
	131
	132
[4470]	133	# returns the human readable file size of filename
	134	def file_size(filename, suffix='B'):
	135	size_raw = os.stat(filename).st_size
	136	for unit in [' ',' K',' M',' G',' T']:
	137	if abs(size_raw) < 1024.0:
	138	return "%i%s%s" % (size_raw, unit, suffix)
	139	size_raw /= 1024.0
	140	return "%.1f%s%s" % (num, 'Y', suffix)
	141
[4670]	142	def ilen(iterable):
	143	return reduce(lambda sum, element: sum + 1, iterable, 0)
[4470]	144
[2413]	145	palmrunline = ""
[4405]	146	set_list = []
[2413]	147
	148	Ui_MainWindow = uic.loadUiType("%s/palmrungui_files/mainwindow.ui" % (palm_bin))[0]
	149	Ui_helpDialog = uic.loadUiType("%s/palmrungui_files/help.ui" % (palm_bin))[0]
	150	Ui_aboutDialog = uic.loadUiType("%s/palmrungui_files/about.ui" % (palm_bin))[0]
	151
[4670]	152	class HelpDialog(QtWidgets.QDialog,Ui_helpDialog):
[2413]	153	def __init__(self, parent=None):
	154	super(HelpDialog,self).__init__()
	155	self.setupUi(self)
	156
[4670]	157	class AboutDialog(QtWidgets.QDialog,Ui_aboutDialog):
[2413]	158	def __init__(self, parent=None):
	159	super(AboutDialog,self).__init__()
	160	self.setupUi(self)
	161
[4670]	162	class Mainwindow(QtWidgets.QMainWindow, Ui_MainWindow):
[2413]	163	def __init__(self, parent=None):
	164	super(Mainwindow, self).__init__()
[2484]	165	self.setupUi(self)
[4670]	166
	167	self.palm_logo.setPixmap(QtGui.QPixmap(palm_bin + "/palmrungui_files/logo.png"))
	168	with open(palm_bin + "/palmrungui", encoding='utf8') as search:
[4470]	169	for line in search:
	170	line = line.rstrip()
	171	if "$Id" in line:
	172	version = "Version: r" + line.split(" ")[3] + " (" + line.split(" ")[4] + ")"
[4670]	173	self.groupBox.findChild(QtWidgets.QLabel,"label_version").setText(version)
[4470]	174	break
[2477]	175	self.recent_jobs(50)
[4405]	176	self.load_jobs()
	177
[4670]	178
	179
[4411]	180	# look up configuration files and add to combo box
	181
[4670]	182	self.group_execution.findChild(QtWidgets.QComboBox,"combo_configuration").addItem("")
[4411]	183
	184	for files in os.listdir(palm_dir):
	185	if files.startswith(".palm.config"):
[4670]	186	tmpstring = list(filter(None,files.split(".palm.config.")))[0]
	187	self.group_execution.findChild(QtWidgets.QComboBox,"combo_configuration").addItem(tmpstring)
[4411]	188
[4670]	189	commandline = self.groupBox.findChild(QtWidgets.QLineEdit,"commandline")
[2413]	190	commandline.setText("")
	191
	192	self.tabWidget.setCurrentIndex(0)
	193
[4670]	194
[4394]	195	filename = "%s/.palmrungui.default" % (palm_dir)
[2413]	196	if os.path.exists(filename):
[4670]	197	file = open(filename, "r")
	198	if ( file is not None ):
	199	# File opened successfully
	200	palmrunline = file.readline()
	201	#if neue zeile zeichen
	202	palmrunline = palmrunline[:len(palmrunline)-1]
	203	file.close()
[2413]	204
[4670]	205	# In case a palmrunline was found, load it to mainwindow
	206	if ( palmrunline != ""):
	207	palmrunline = palmrunline[17:]
	208	commandline.setText(palmrunline)
	209	self.setup_gui(palmrunline)
[4405]	210
[4670]	211	QtWidgets.QApplication.processEvents()
[4405]	212
[4670]	213	# Start refresh timer. On timeout perform update
[4405]	214
[4470]	215	self.timer = QtCore.QTimer(self)
	216	self.timer.timeout.connect(self.update_all)
	217	self.timer.setSingleShot(False)
	218	self.timer.start(update_frequency)
	219
	220	# The timetimer counts the time since last update
	221	self.timetimer= QtCore.QElapsedTimer()
	222	self.timetimer.start()
	223
	224	# The labeltimer induces the update of the remaining time in the UI
[4670]	225
[4470]	226	self.labeltimer = QtCore.QTimer(self)
	227	self.labeltimer.timeout.connect(self.UpdatePush)
	228	self.labeltimer.setSingleShot(False)
	229
	230	# Update in the UI will be performed at each 1/10 of the update interval
	231	self.labeltimer.start(update_frequency/10)
	232	self.push_update.setText("Update (" + str(int(update_frequency/1000/60)) + " min)")
	233
[2413]	234	# starts xterm with palmrun commandline
	235	#######################################
	236	def startpalmrun(self):
[4670]	237	palmrunline = str(self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").text())
[4411]	238	palmrunline_save = palmrunline
[4670]	239
[2413]	240	# Disable the main window
	241	self.tabWidget.setEnabled(False)
[4670]	242	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(False)
	243	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(False)
	244	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setText("wait...")
	245	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText("Executing palmrun in xterm...")
[4470]	246
[2413]	247	# Wait until all commands have been executed (ugly) ?
	248	#for i in range(0,21):
	249	# qApp->processEvents()
[4470]	250
[2413]	251	# Start xterm as QProcess
	252	palmrun = QProcess()
	253	palmrun.setProcessChannelMode(QProcess.MergedChannels) # mergedChannels
[4393]	254	palmrun.setWorkingDirectory(palm_dir)
[4470]	255
[2413]	256	geomet = self.frameGeometry()
[4470]	257
[2413]	258	posx = geomet.x()+geomet.width()
	259	posy = geomet.y()
[4470]	260
	261	if ( os.path.isfile("palmrungui.log") ):
	262	os.remove("palmrungui.log")
	263
	264	s = " -title \"Executing palmrun...\" -fa \"Monospace\" -l -lf \"palmrungui.log\" -fs 11 -geometry \"80x38+%d+%d\" -e \"" % (posx,posy)
	265	palmrunline = "%s%s ;echo -n '--> Press enter to continue...';read yesno\"</dev/stdin" % (s, palmrunline.replace("\"","\'"))
	266
[2413]	267	mString = "xterm %s" % (palmrunline)
[4411]	268	palmrun.start(mString)
[4470]	269
[2413]	270	if( palmrun.waitForStarted() is False ):
	271	return
[4470]	272
[2413]	273	# Wait until palmrun has finished or wait for 200 minutes
[4411]	274	palmrun.waitForFinished(3600000)
[4470]	275
[2413]	276	# Jobs has been submitted or aborted. Continuing...
	277	# Save the palmrun command to history file
[4394]	278	filename = "%s/.palmrungui.history" % (palm_dir)
[2413]	279	tmstamp = strftime("%Y/%m/%d %H:%M")
[4670]	280	tag = str(self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").text())
[2413]	281
	282	file = open(filename,"a")
[4670]	283	s = "%s %s (%s)\n" % (tmstamp,palmrunline_save,tag)
[2413]	284	file.write(s)
	285	file.close()
	286
	287	# Enable main window again
	288	self.tabWidget.setEnabled(True)
[4670]	289	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(True)
	290	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setText("palmrun")
	291	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(palmrunline_save)
	292	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
[2413]	293
	294	# Reload recent jobs
[2477]	295	self.recent_jobs(50)
[2413]	296
	297
[4470]	298
	299	# Update the label
	300	def UpdatePush(self):
[4670]	301	remaining_time = int((update_frequency - self.timetimer.elapsed()) / 1000 / 60)
[4470]	302	self.push_update.setText("Update (" + str(remaining_time) + " min)")
	303
	304
[4411]	305	# starts xterm with palmbuild commandline
	306	#######################################
	307	def startpalmbuild(self):
[4670]	308	palmbuildline = 'palmbuild -c ' + str(self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").currentText())
[4470]	309
[4670]	310	full_build = self.group_execution.findChild(QtWidgets.QCheckBox,"check_rebuild").checkState()
[4470]	311
	312	if ( full_build == 2 ):
	313	for filename in os.listdir(palm_source):
	314	os.utime(palm_source + "/" + filename, None)
	315
[4670]	316	palmrunline_save = str(self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").text())
[4470]	317
[4411]	318	# Disable the main window
[4420]	319	palmbuildline_save = palmbuildline
[4411]	320	self.tabWidget.setEnabled(False)
[4670]	321	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(False)
	322	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(False)
	323	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setText("wait...")
	324	self.group_execution.findChild(QtWidgets.QPushButton,"button_palmbuild").setText("wait...")
	325	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText("Executing palmbuild in xterm...")
[4411]	326
	327	# Wait until all commands have been executed (ugly) ?
	328	#for i in range(0,21):
	329	# qApp->processEvents()
	330
	331	# Start xterm as QProcess
	332	palmbuild = QProcess()
	333	palmbuild.setProcessChannelMode(QProcess.MergedChannels) # mergedChannels
	334	palmbuild.setWorkingDirectory(palm_dir)
	335
	336	geomet = self.frameGeometry()
	337
	338	posx = geomet.x()+geomet.width()
	339	posy = geomet.y()
	340
	341	s = " -title \"Executing palmbuild...\" -fa \"Monospace\" -fs 11 -geometry \"80x38+%d+%d\" -e \"" % (posx,posy)
	342	palmbuildline = "%s%s;echo -n '--> Press enter to continue...';read yesno\"</dev/stdin" % (s, palmbuildline.replace("\"","\'"))
	343
	344	mString = "xterm %s" % (palmbuildline)
	345	palmbuild.start(mString)
	346
	347	if( palmbuild.waitForStarted() is False ):
	348	return
	349
	350	# Wait until palmbuild has finished or wait for 200 minutes
	351	palmbuild.waitForFinished(3600000)
	352
	353
	354
	355	# Enable main window again
	356	self.tabWidget.setEnabled(True)
[4670]	357	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(True)
	358	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
	359	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setText("palmrun")
	360	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(palmrunline_save)
	361	self.group_execution.findChild(QtWidgets.QPushButton,"button_palmbuild").setText("(re-)build")
[4411]	362	# Reload recent jobs
	363	self.recent_jobs(50)
	364
[2413]	365	# loads recent jobs
	366	######################################
	367	def recent_jobs(self, number):
[4394]	368	fileDir = "%s/.palmrungui.history" % (palm_dir)
[2413]	369	if os.path.exists(fileDir):
	370	pass
	371	else:
	372	return
[4470]	373
[2413]	374	file = open(fileDir,"r")
	375	history = file.readlines()
	376	tmphistory = list()
[4411]	377	tmptag = list()
	378	file.close()
	379	j = 0
[2413]	380
[4670]	381	list_jobname = self.group_history.findChild(QtWidgets.QListWidget,"list_jobname")
[2413]	382	list_jobname.clear()
	383
	384	# Read history entries and append to recent job list
	385	i=len(history)-1
	386	count = 0
[2477]	387	while i>=0 and count<number:
[2413]	388	timestamp = history[i][:16]
	389	listitem = history[i][17:len(history[i])-1]
[4411]	390	tagitem = listitem
[4470]	391	configitem = listitem
[2413]	392	matchitems = list_jobname.findItems(listitem, QtCore.Qt.MatchExactly)
	393
	394	if ( len(matchitems) == 0 ):
[4670]	395	listitem = list(filter(None,listitem.split(" -r")))[1]
[4470]	396	listitem = listitem.strip()
[4670]	397	listitem = list(filter(None,listitem.split(" ")))[0]
[4470]	398	listitem = listitem.replace("\"","")
[4411]	399	list_jobname.addItem(listitem)
[4470]	400
[4670]	401	configitem = list(filter(None,configitem.split(" -c")))
	402	if ( len(configitem) < 2):
	403	count = count +1
	404	continue
	405	else:
	406	configitem = configitem[1].strip()
	407	configitem = list(filter(None,configitem.split(" ")))[0]
[4470]	408	configitem = configitem.replace("\"","")
	409
	410	s = "%s: %s (%s)" % (timestamp,listitem,configitem)
[4411]	411	tmphistory.append(s)
	412
	413
[4670]	414	tagitem = list(filter(None,tagitem.split(" (")))[1]
[4411]	415	tagitem = tagitem.replace(")","")
	416	if ( len(tagitem) == 0 ):
	417	s = "Tag: empty"
	418	else:
	419	s = "Tag: %s" % (tagitem)
	420	tmptag.append(s)
[2413]	421	count = count +1
[4411]	422
[2413]	423	j = j+1
	424
	425	if ( j == number ):
	426	break
	427	i = i-1
	428
	429	# Send to list
[4411]	430	list_jobname.clear()
[2413]	431
	432	i=0
	433	while i<len(tmphistory):
[4411]	434	list_jobname.addItem(tmphistory[i])
	435	list_jobname.item(i).setToolTip(tmptag[i])
[2413]	436	i = i+1
	437
	438
	439	# Enables coupled settings
	440	###############################
	441	def enable_coupled(self):
[4670]	442	coupledState = self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").currentText()
	443	group = self.group_execution.findChild(QtWidgets.QGroupBox, "group_coupled")
[2413]	444
	445	if (coupledState == "Restart run (coupled atmosphere ocean)" or coupledState == "Initial run (coupled atmosphere ocean)"):
	446	self.group_coupled.setEnabled(True)
	447	else:
	448	self.group_coupled.setEnabled(False)
	449
	450
[2477]	451	# select a job via click from list
[2413]	452	#################################
	453	def choosejob_list(self):
	454	# Get selected item from list
[4670]	455	list_jobname = self.group_history.findChild(QtWidgets.QListWidget,"list_jobname")
[2413]	456	filename = str(list_jobname.currentItem().text())
[4470]	457
[4411]	458	timestamp = filename[:16]
[4470]	459	jobname = filename[18:].split(" ")[0]
	460
[2413]	461	itemint = list_jobname.currentRow()
[4405]	462
[2413]	463	# Reload list
[2477]	464	self.recent_jobs(50)
[4405]	465	self.load_jobs()
[2413]	466
	467	# Set selected item to jobname
[4411]	468	list_jobname.item(itemint).setSelected(True)
[2413]	469
[4405]	470	# Set selected item to jobname in "available jobs" list
	471	item2int = self.list_jobs.findItems(jobname,QtCore.Qt.MatchCaseSensitive)
[4411]	472
	473	if ( item2int != [] ):
	474	self.list_jobs.setCurrentItem(item2int[0])
[4405]	475	self.update_input()
[4411]	476
[2413]	477
[4394]	478	fileDir = "%s/.palmrungui.history" % (palm_dir)
[2413]	479	file = open(fileDir,"r")
	480	history = file.readlines()
	481	tmphistory = list()
[4411]	482	file.close()
[2413]	483
	484	i = len(history)
	485	while i>=1:
	486	listitem = history[i-1][17:len(history[i-1])-1]
[4670]	487	listitem = list(filter(None,listitem.split(" -r")))[1]
[4470]	488	listitem = listitem.strip()
[4670]	489	listitem = list(filter(None,listitem.split(" ")))[0]
[4470]	490	listitem = listitem.replace("\"","")
[2413]	491
	492	# Select command line with correct timestamp and jobname
	493	if (history[i-1][:16] == timestamp and listitem == jobname):
	494	palmrunline = history[i-1]
	495	palmrunline = palmrunline[17:]
	496	palmrunline = palmrunline[:len(palmrunline)-1]
[4670]	497	palmrunline = list(filter(None,palmrunline.split("(")))[0]
	498	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(palmrunline)
[2477]	499
[4411]	500
	501	tag = history[i-1].split('\n')[0]
[4670]	502	tag = list(filter(None,tag.split("(")))[1]
[4411]	503	tag = tag.replace(")","")
	504
[4670]	505	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setText(tag)
[4411]	506	self.setup_gui(palmrunline)
	507	self.list_jobname.item(itemint).setSelected(True)
	508
[2413]	509	return
	510	i = i-1
	511
	512	# Change run identifer (initial, restart, coupled...)
	513	######################################################
	514	def change_rc_list(self):
[4670]	515	drop_job = self.group_execution.findChild(QtWidgets.QComboBox,"drop_job").currentText()
[2413]	516	self.change_commandline("a","")
	517
	518	# Enable PE distribution for atmosphere/ocean
	519	if ( drop_job == "Restart run (coupled atmosphere ocean)" or drop_job == "Initial run (coupled atmosphere ocean)"):
[4670]	520	drop_atmos = self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos").text()
	521	drop_ocean = self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean").text()
[2413]	522	s = "%s %s" % (drop_atmos,drop_ocean)
	523	self.change_commandline("Y",s)
	524
	525
	526	if ( drop_job == "Restart run" or drop_job == "Restart run (coupled atmosphere ocean)"):
[3487]	527	self.change_commandline("r","")
[2413]	528
	529	# Check of ocean runs
	530	else:
	531	self.delete_commandline("Y")
	532	if (drop_job == "Precursor run (ocean)"):
	533	self.activate_flag("y")
	534	else:
	535	self.deactivate_flag("y")
	536
	537	# changes commandline depending on parameters
	538	##########################################################
	539	def change_commandline(self, id_str, fwt_str):
	540	fwt_str = str(fwt_str)
	541	initialize = False
[4670]	542	palmrunline = str(self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").text())
[2413]	543	s = " -%s " % (id_str)
[4670]	544	splitline = list(filter(None,palmrunline.split(s)))
[2413]	545
	546	if ( len(splitline) == 0 ):
	547	splitline.append("palmrun")
	548	splitline.append(" ")
	549	initialize = True
	550
	551	elif ( len(splitline) == 1 ):
	552	splitline.append(" ")
	553
	554	param = splitline[1].split("-")
	555
[3487]	556	# Change in parameter "r" (jobname)
	557	if (id_str == "r"):
[4670]	558	filename = str(self.group_execution.findChild(QtWidgets.QLineEdit,"line_jobname").text())
[2413]	559	s = filename.split("JOBS/")
	560	param[0] = s[len(s)-1]
	561
	562	if ( initialize == True ):#and self.group_runcontrol.isEnabled() == True ):
	563	self.group_execution.setEnabled(True)
[4670]	564	self.group_execution.findChild(QtWidgets.QComboBox,"drop_job").setEnabled(True)
[2413]	565	self.group_advanced.setEnabled(True)
[4670]	566	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(True)
	567	self.menuBar.findChild(QtWidgets.QMenu,"menuStart").actions()[3].setEnabled(True)
	568	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
[2413]	569
	570	elif ( param[0] == ""):
	571	self.group_execution.setEnabled(False)
[4670]	572	self.group_execution.findChild(QtWidgets.QComboBox,"drop_job").setEnabled(False)
	573	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(False)
	574	self.menuBar.findChild(QtWidgets.QMenu,"menuStart").actions()[3].setEnabled(False)
[2413]	575	self.group_advanced.setEnabled(False)
[4670]	576	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
[3487]	577	self.delete_commandline("r")
[2413]	578	self.change_commandline("a","remove")
	579	return 1
	580
	581	else:
	582
	583	self.group_execution.setEnabled(True)
	584	self.drop_job.setEnabled(True)
	585	self.group_advanced.setEnabled(True)
	586
	587	# Change in parameter "a" (run control list)
	588	elif (id_str == "a"):
	589
[4670]	590	drop_job = self.group_execution.findChild(QtWidgets.QComboBox,"drop_job").currentText()
[2413]	591	rc_flag = "#"
	592
	593	if (drop_job == "Initial run"):
	594	rc_flag = "#"
	595
	596	elif (drop_job == "Restart run"):
[2477]	597	rc_flag = "r"
[2413]	598
	599	elif (drop_job == "Precursor run (atmosphere)"):
	600	rc_flag = "#"
	601
	602	elif (drop_job == "Precursor run (ocean)"):
	603	rc_flag = "o#"
	604
	605	elif (drop_job == "Initial run (coupled atmosphere ocean)"):
	606	rc_flag = "#"
	607
	608	elif (drop_job == "Restart run (coupled atmosphere ocean)"):
[2477]	609	rc_flag = "r"
[2413]	610
	611	param[0] = "\"d3%s" % (rc_flag)
	612
	613
	614	if (drop_job == "Restart run (coupled atmosphere ocean)" or drop_job == "Initial run (coupled atmosphere ocean)"):
	615	if (rc_flag == "#"):
	616	rc_flag = "o#"
	617	else:
[2825]	618	rc_flag = "or"
[2413]	619
	620	param[0] = "%s d3%s" % (param[0],rc_flag)
	621
[4670]	622	status_restarts = self.group_execution.findChild(QtWidgets.QCheckBox,"check_restarts").checkState()
[2413]	623
	624	if (status_restarts == 2):
	625	param[0]="%s restart" % (param[0])
	626
	627
[4670]	628	status_cycfill = self.group_execution.findChild(QtWidgets.QCheckBox,"check_cycfill").checkState()
[2413]	629
	630	if (status_cycfill == 2):
[4670]	631	param[0]="%s rec" % (param[0])
	632
	633	status_svf = self.group_execution.findChild(QtWidgets.QCheckBox,"check_svf").checkState()
	634
[2825]	635	if (status_svf == 2):
[4670]	636	param[0]="%s svfin" % (param[0])
	637
	638	status_svf_2 = self.group_execution.findChild(QtWidgets.QCheckBox,"check_svf_2").checkState()
[2413]	639
[4670]	640	if (status_svf_2 == 2):
	641	param[0]="%s svfout" % (param[0])
	642
[2413]	643	param[0]="%s\"" % (param[0])
[4670]	644
[2413]	645	if ( fwt_str == "remove"):
	646	self.delete_commandline(id_str)
	647	return 1
	648
	649	else:
	650	self.button_start.setEnabled(True)
	651	self.action_save.setEnabled(True)
[4670]	652	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
[2413]	653
	654	# Change in any other parameter
	655	else:
	656	if ( fwt_str != ""):
	657	param[0] = "\"%s\"" % (fwt_str)
	658
	659	else:
	660	self.delete_commandline(id_str)
	661	return 1
	662
	663	# Join the new palmrunline
	664	splitline[1]= " -".join(param)
	665
	666
	667	s = " -%s " % (id_str)
	668	newpalmrunline = s.join(splitline)
	669
[4670]	670	# Print the new palmrunline to mainwindow
[2413]	671	newpalmrunline = newpalmrunline.replace(" "," ")
[4670]	672	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(newpalmrunline)
[2413]	673
	674	# change lineinput depending on sender
	675	###################################################################################
	676	def change_lineinput(self):
[4670]	677	if ( self.sender() == self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration") ):
	678	tmptext = self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").currentText()
	679	if not tmptext:
[4411]	680	self.change_commandline("c"," ")
[4670]	681	self.group_execution.findChild(QtWidgets.QPushButton,'button_palmbuild').setEnabled(False)
[4411]	682	else:
	683	self.change_commandline("c",tmptext)
[4670]	684	self.group_execution.findChild(QtWidgets.QPushButton,'button_palmbuild').setEnabled(True)
[2413]	685
[4670]	686	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_q")):
	687	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_q").text()
[2413]	688	self.change_commandline("q",tmptext)
	689
[4670]	690	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_account")):
	691	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_account").text()
[2480]	692	self.change_commandline("A",tmptext)
[2413]	693
[4670]	694	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_pe")):
	695	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_pe").text()
[2413]	696	self.change_commandline("X",tmptext)
	697
[4670]	698	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_tpn")):
	699	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_tpn").text()
[2413]	700	self.change_commandline("T",tmptext)
	701
[4670]	702	elif ( self.sender() == self.group_execution.findChild(QtWidgets.QLineEdit,"line_time")):
	703	tmptext = self.group_execution.findChild(QtWidgets.QLineEdit,"line_time").text()
[2413]	704	self.change_commandline("t",tmptext)
	705
[4670]	706	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_M")):
	707	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_M").text()
[2413]	708	self.change_commandline("M",tmptext)
	709
[4670]	710	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_m")):
	711	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_m").text()
[2413]	712	self.change_commandline("m",tmptext)
	713
[4670]	714	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_D")):
	715	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_D").text()
[2413]	716	self.change_commandline("D",tmptext)
	717
[4670]	718	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_c")):
	719	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_c").text()
[4394]	720	if ( tmptext == ".palmrungui.config"):
[2413]	721	tmptext = ""
	722	self.change_commandline("c",tmptext)
	723
[4670]	724	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_s")):
	725	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_s").text()
[2413]	726	self.change_commandline("s",tmptext)
	727
[4670]	728	elif ( self.sender() == self.group_advanced.findChild(QtWidgets.QLineEdit,"line_w")):
	729	tmptext = self.group_advanced.findChild(QtWidgets.QLineEdit,"line_w").text()
[2413]	730	self.change_commandline("w",tmptext)
	731
[4670]	732	elif ( self.sender() == self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos") or
	733	self.sender() == self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean")):
	734	t1 = self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos").text()
	735	t2 = self.group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean").text()
[2413]	736	tmptext = "%s %s" % (t1,t2)
	737
	738	self.change_commandline("Y",tmptext)
	739
	740	# try catch sowas in der art
	741	pe1 = 0
	742	pe2 = 0
	743
	744	try:
	745	pe1 = int(t1)
	746	except ValueError:
	747	pass
[4670]	748
[2413]	749	try:
	750	pe2 = int(t2)
	751	except ValueError:
	752	pass
[4670]	753
[2413]	754	PE_total = pe1+pe2
[4670]	755	self.group_execution.findChild(QtWidgets.QLineEdit,"line_pe").setText(str(PE_total))
[2413]	756	self.change_commandline("X",str(PE_total))
[4670]	757
[2413]	758	# deletes parameter from commandline
	759	#####################################################################################
	760	def delete_commandline(self, id_str):
	761	# Read palmrunline
[4670]	762	commandline = self.groupBox.findChild(QtWidgets.QLineEdit,"commandline")
[2413]	763	palmrunline = str(commandline.text())
	764	s = " -%s" % (id_str)
[4670]	765	splitline = list(filter(None,palmrunline.split(s)))
[2413]	766
	767	if ( len(splitline) == 1):
	768	return 1
	769	else:
	770	param = splitline[1].split("-")
	771	param[0] = ""
	772	splitline[1]= " -".join(param)
	773	newpalmrunline = "".join(splitline)
	774	newpalmrunline = newpalmrunline.replace(" "," ")
	775
	776	# Print new palmrunline to screen
	777	commandline.setText(newpalmrunline)
	778
	779	# controls flags
	780	###################################################################################
	781	def check_flags(self):
[4670]	782	status = self.group_execution.findChild(QtWidgets.QCheckBox,"check_delete_tmp_files" ).checkState()
[2413]	783	if (status == 2):
	784	self.activate_flag("B")
	785	else:
	786	self.deactivate_flag("B")
	787
[4670]	788	status = self.group_execution.findChild(QtWidgets.QCheckBox,"check_verbose" ).checkState()
[2413]	789	if (status == 2):
	790	self.activate_flag("v")
	791	else:
	792	self.deactivate_flag("v")
	793
[4670]	794	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_b" ).checkState()
[2413]	795	if (status == 2):
	796	self.activate_flag("b")
	797	else:
	798	self.deactivate_flag("b")
	799
[4670]	800	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_F" ).checkState()
[2413]	801	if (status == 2):
	802	self.activate_flag("F")
	803	else:
	804	self.deactivate_flag("F")
	805
[4670]	806	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_I" ).checkState()
[2413]	807	if (status == 2):
	808	self.activate_flag("I")
	809	else:
	810	self.deactivate_flag("I")
	811
[4670]	812	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_k" ).checkState()
[2413]	813	if (status == 2):
	814	self.activate_flag("k")
	815	else:
	816	self.deactivate_flag("k")
	817
[4670]	818	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_O" ).checkState()
[2413]	819	if (status == 2):
	820	self.activate_flag("O")
	821	else:
	822	self.deactivate_flag("O")
	823
[4670]	824	status = self.group_execution.findChild(QtWidgets.QCheckBox,"check_prebuilt" ).checkState()
[2413]	825	if (status == 2):
[4670]	826	self.activate_flag("V")
	827	else:
	828	self.deactivate_flag("V")
	829
	830	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_x" ).checkState()
	831	if (status == 2):
[2413]	832	self.activate_flag("x")
	833	else:
	834	self.deactivate_flag("x")
	835
[4670]	836	status = self.group_advanced.findChild(QtWidgets.QCheckBox,"check_Z" ).checkState()
[2413]	837	if (status == 2):
	838	self.activate_flag("Z")
	839	else:
	840	self.deactivate_flag("Z")
	841
	842	# changes flag to parameter
	843	##################################################################################
	844	def activate_flag(self, id_str):
[4670]	845	commandline = self.groupBox.findChild(QtWidgets.QLineEdit,"commandline")
[2413]	846	palmrunline = str(commandline.text())
	847	s = " -%s" % (id_str)
[4670]	848	splitline = list(filter(None,palmrunline.split(s)))
[2413]	849
	850	if ( len(splitline) == 1):
	851	splitline.append("")
	852	s = " -%s" % (id_str)
	853	newpalmrunline = s.join(splitline)
	854	newpalmrunline = newpalmrunline.replace(" "," ")
	855	commandline.setText(newpalmrunline)
	856
	857	# deletes flag in commandline
	858	####################################################################################
	859	def deactivate_flag(self, id_str):
[4670]	860	commandline = self.groupBox.findChild(QtWidgets.QLineEdit,"commandline")
[2413]	861	palmrunline = str(commandline.text())
	862	s = " -%s" % (id_str)
[4670]	863	splitline = list(filter(None,palmrunline.split(s)))
[2413]	864
	865	newpalmrunline = "".join(splitline)
	866	newpalmrunline = newpalmrunline.replace(" "," ")
	867	commandline.setText(newpalmrunline)
	868
	869	# Clears window
	870	#################################################################################
	871	def reset_window(self):
	872	self.setupUi(self)
	873	self.tabWidget.setCurrentIndex(0)
[4670]	874	self.palm_logo.setPixmap(QtGui.QPixmap(palm_dir + "/trunk/SCRIPTS/palmrungui_files/logo.png"))
[2477]	875	self.recent_jobs(50)
[4405]	876	self.load_jobs()
[2413]	877
[4470]	878
[2413]	879	# Safes current commandline and user parameters to default file
	880	################################################################################
	881	def save_default(self):
[4670]	882	string_to_file = self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").text()
	883
[4394]	884	filename ="%s/.palmrungui.default" % (palm_dir)
[2413]	885	tmstamp = strftime("%Y/%m/%d %H:%M")
[4670]	886
[2413]	887	file = open(filename,"w")
	888	s = "%s %s" % (tmstamp, string_to_file)
	889	file.write(s)
	890	file.close()
	891
	892
	893	# Executes command which starts watchdog (start palm_wd)
	894	########################################################
	895	def start_watchdog(self):
	896	subprocess.Popen(["nohup","palm_wd",">>","/dev/null", "2>&1","&"])
	897
	898	# Opens "help" dialog
	899	#################################
	900	def help(self):
	901	dialog = HelpDialog()
	902	dialog.exec_()
	903
	904	# Opens "about" dialog
	905	##################################
	906	def about_gui(self):
	907	dialog = AboutDialog()
	908	dialog.exec_()
	909
	910	# commandline to buttons etc
	911	##############################
	912	def setup_gui(self, palmrun_str):
[2484]	913
[4670]	914	#self.palm_logo.setPixmap(QtWidgets.QPixmap(palm_dir + "/trunk/SCRIPTS/palmrungui_files/logo.png"))
[2484]	915
[2413]	916	# Some initial settings
	917	coupled_run = False
	918	ocean_run = False
	919	nojob = False
	920
	921	#Split parameters in palmrunline
	922	splitline = palmrun_str.split(" -")
	923
	924	if ( splitline[0] != "palmrun"):
	925	return 1
	926
	927	else:
[4405]	928	self.group_execution.setEnabled(True)
[2413]	929
	930	# Loop for all parameters in palmrunline
	931	i = len(splitline)-1
	932	while i >= 1:
	933
	934	# Determine parameter
	935	splitparameter = splitline[i].split(" ")
	936
	937	parameter = splitparameter[0]
	938	splitparameter.pop(0)
	939	options = " ".join(splitparameter)
	940	options = options.replace("\"","")
	941
	942	# Check for suitable switch
[3487]	943	if ( parameter == "r"):
[2413]	944
	945	if ( options != ""):
[4670]	946	self.group_execution.findChild(QtWidgets.QLineEdit,"line_jobname").setText(options)
[2413]	947	nojob = False
	948
	949	else:
	950	nojob = True
	951
[3487]	952	elif ( parameter == "c"):
[4670]	953	tmpindex = self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").findText(options.strip(),QtCore.Qt.MatchExactly)
[4411]	954	if tmpindex != -1:
[4670]	955	self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").setCurrentIndex(tmpindex)
[4411]	956	else:
[4670]	957	self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").setCurrentIndex(0)
[2413]	958	elif ( parameter == "q"):
[4670]	959	self.group_execution.findChild(QtWidgets.QLineEdit,"line_q").setText(options)
[2413]	960
[2480]	961	elif ( parameter == "A"):
[4670]	962	self.group_execution.findChild(QtWidgets.QLineEdit,"line_account").setText(options)
[2413]	963
	964	elif ( parameter == "X"):
[4670]	965	self.group_execution.findChild(QtWidgets.QLineEdit,"line_pe").setText(options)
[2413]	966
	967	elif ( parameter == "T"):
[4670]	968	self.group_execution.findChild(QtWidgets.QLineEdit,"line_tpn").setText(options)
[2413]	969
	970	elif ( parameter == "t"):
[4670]	971	self.group_execution.findChild(QtWidgets.QLineEdit,"line_time").setText(options)
[2413]	972
	973	elif ( parameter == "B"):
[4670]	974	self.group_execution.findChild(QtWidgets.QCheckBox,"check_delete_tmp_files").setChecked(True)
[2413]	975
	976	elif ( parameter == "v"):
[4670]	977	self.group_execution.findChild(QtWidgets.QCheckBox,"check_verbose").setChecked(True)
[2413]	978
	979	elif ( parameter == "b"):
[4670]	980	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_b").setChecked(True)
[2413]	981
	982	elif ( parameter == "F"):
[4670]	983	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_F").setChecked(True)
[2413]	984
	985	elif ( parameter == "I"):
[4670]	986	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_I").setChecked(True)
[2413]	987
	988	elif ( parameter == "k"):
[4670]	989	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_k").setChecked(True)
[2413]	990
	991	elif ( parameter == "O"):
[4670]	992	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_O").setChecked(True)
	993
	994	elif ( parameter == "V"):
	995	self.group_execution.findChild(QtWidgets.QCheckBox,"check_prebuilt").setChecked(True)
	996
[2413]	997	elif ( parameter == "x"):
[4670]	998	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_x").setChecked(True)
	999
[2413]	1000	elif ( parameter == "Z"):
[4670]	1001	self.group_advanced.findChild(QtWidgets.QCheckBox,"check_Z").setChecked(True)
[2413]	1002
	1003	elif ( parameter == "m"):
[4670]	1004	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_m").setText(options)
[2413]	1005
	1006	elif ( parameter == "M"):
[4670]	1007	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_M").setText(options)
[2413]	1008
	1009	elif ( parameter == "D"):
[4670]	1010	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_D").setText(options)
[2413]	1011
	1012	elif ( parameter == "c"):
[4670]	1013	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_c").setText(options)
[2413]	1014
	1015	elif ( parameter == "s"):
[4670]	1016	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_s").setText(options)
[2413]	1017
	1018	elif ( parameter == "w"):
[4670]	1019	self.group_advanced.findChild(QtWidgets.QLineEdit,"line_w").setText(options)
[2413]	1020
	1021
	1022	# Determine settings for coupled restart runs
	1023	elif ( parameter == "Y"):
	1024	optionssplit = options.split(" ")
	1025
[4670]	1026	group_coupled = self.group_execution.findChild(QtWidgets.QGroupBox,"group_coupled")
	1027	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos").setEnabled(True)
	1028	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean").setEnabled(True)
	1029	group_coupled.findChild(QtWidgets.QLabel,"label_coupled1").setEnabled(True)
	1030	group_coupled.findChild(QtWidgets.QLabel,"label_coupled2").setEnabled(True)
	1031	group_coupled.findChild(QtWidgets.QLabel,"label_coupled3").setEnabled(True)
	1032	group_coupled.findChild(QtWidgets.QLabel,"label_coupling").setEnabled(True)
[2413]	1033
	1034	if (optionssplit.count() == 2):
[4670]	1035	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos").setEnabled(optionssplit[0])
	1036	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean").setEnabled(optionssplit[1])
[2413]	1037
	1038	else:
[4670]	1039	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_atmos").setText("")
	1040	group_coupled.findChild(QtWidgets.QLineEdit,"line_PE_ocean").setText("")
[2413]	1041
	1042
	1043	coupled_run = True
	1044
	1045	elif ( parameter == "y"):
[4670]	1046	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setCurrentIndex(3)
[2413]	1047
	1048
	1049	# Determine settings for the run control list
	1050	elif ( parameter == "a"):
	1051
	1052	optionssplit = options.split(" ")
	1053
	1054	options_2 = None
	1055	options_all = None
	1056
	1057	j = 0
	1058	while j < len(optionssplit):
	1059
	1060	options_all = optionssplit[j]
	1061	options_2 = optionssplit[j][:2]
[2825]	1062
[2477]	1063	if (options_2 == "d3"):
	1064	if (options_all[:3][-1] == "#"):
[4670]	1065	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setCurrentIndex(0)
[2477]	1066	elif (options_all[:3][-1] == "r"):
[4670]	1067	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setCurrentIndex(1)
[2413]	1068
[2477]	1069	elif (options_all[:3][-1] == "o"):
[2413]	1070	ocean_run = True
	1071
	1072	if (options_all == "restart"):
[4670]	1073	self.group_execution.findChild(QtWidgets.QCheckBox,"check_restarts").setChecked(True)
[4470]	1074
[2413]	1075	j = j+1
	1076	i = i-1
	1077	# Change drop box state in case of ocean precursor or coupled restart runs
	1078	if ( ocean_run == True ):
	1079	if ( coupled_run == True ):
[4670]	1080	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setCurrentIndex(4)
[2413]	1081
	1082	else:
[4670]	1083	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setCurrentIndex(3)
[2413]	1084
	1085	# Join palmrunline and post it to mainwindow
	1086	palmrunline = " -".join(splitline)
[4670]	1087	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(palmrunline)
[2413]	1088
	1089	# Disable mainwindow if no job was found, otherwise enable
	1090	if ( nojob == True ):
	1091	self.group_execution.setEnabled(False)
[4670]	1092	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(False)
	1093	self.menuBar.findChild(QtWidgets.QMenu,"menuStart").actions()[3].setEnabled(False)
	1094	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setEnabled(False)
[2413]	1095	self.group_advanced.setEnabled(False)
	1096	self.check_advanced.setEnabled(False)
[4670]	1097	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(False)
[2413]	1098
	1099	else:
	1100	self.group_execution.setEnabled(True)
[4670]	1101	self.groupBox.findChild(QtWidgets.QPushButton,"button_start").setEnabled(True)
	1102	self.menuBar.findChild(QtWidgets.QMenu,"menuStart").actions()[3].setEnabled(True)
	1103	self.group_execution.findChild(QtWidgets.QComboBox, "drop_job").setEnabled(True)
[2413]	1104	self.group_advanced.setEnabled(True)
[4670]	1105	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setEnabled(True)
[4470]	1106
	1107
[2413]	1108	self.tabWidget.setCurrentIndex(0)
[4470]	1109
	1110
	1111	## Open from history
	1112	###################################
[2413]	1113	def open_from_file(self):
	1114
[4470]	1115	# Show History
	1116	opt = OpenHistoryBox()
	1117	opt.exec_()
[4405]	1118
[4481]	1119	if ( history_entry != "" ):
	1120	palmrunline = str(history_entry)
	1121	palmrunline = palmrunline[17:]
	1122	palmrunline = palmrunline[:len(palmrunline)-1]
[4670]	1123	palmrunline = list(filter(None,palmrunline.split("(")))[0]
	1124	self.groupBox.findChild(QtWidgets.QLineEdit,"commandline").setText(palmrunline)
[4470]	1125
[4481]	1126	# Set selected item to jobname in "available jobs" list
	1127	jobname = str(history_entry[17:])
[4670]	1128	jobname = list(filter(None,jobname.split(" -r")))[1]
[4481]	1129	jobname = jobname.strip()
[4670]	1130	jobname = list(filter(None,jobname.split(" ")))[0]
[4481]	1131	jobname = jobname.replace("\"","")
	1132	item2int = self.list_jobs.findItems(jobname,QtCore.Qt.MatchCaseSensitive)
[4470]	1133
[4481]	1134	if ( item2int != [] ):
	1135	self.list_jobs.setCurrentItem(item2int[0])
	1136	self.update_input()
[4470]	1137
[4481]	1138	# Add tooltip tag
	1139	tag = str(history_entry).split('\n')[0]
[4670]	1140	tag = list(filter(None,tag.split("(")))[1]
[4481]	1141	tag = tag.replace(")","")
[4670]	1142	self.groupBox.findChild(QtWidgets.QLineEdit,"line_tag").setText(tag)
[4405]	1143
[4481]	1144	# Process palmrungui to set up gui controls
	1145	self.setup_gui(palmrunline)
[4470]	1146
	1147
[4405]	1148	def update_all(self):
	1149
	1150	self.setEnabled(False)
	1151	self.list_input.clear()
	1152	self.list_user.clear()
	1153	self.list_monitoring.clear()
	1154	self.list_output.clear()
	1155	self.load_jobs()
	1156	self.setEnabled(True)
[4427]	1157	self.update_input()
[4405]	1158
[4470]	1159
[4405]	1160	# Load jobs into list
	1161	def load_jobs(self):
	1162
[4427]	1163	selected_job = self.list_jobs.currentItem()
	1164
	1165	if ( selected_job is not None ):
	1166	jobname = selected_job.text()
	1167	else:
	1168	jobname = ""
	1169
[4405]	1170	self.list_jobs.clear()
	1171	self.line_path.setText(job_dir + "/")
	1172
	1173	list_of_files = os.listdir(job_dir)
[4411]	1174
	1175
[4405]	1176	for i in range(0,len(list_of_files)):
	1177	tmp_file = job_dir + "/" + list_of_files[i]
	1178
	1179	if ( os.path.isdir(tmp_file) ):
[4411]	1180	self.list_jobs.addItem(str(list_of_files[i]))
	1181
[4405]	1182
	1183
[4427]	1184	item2int = self.list_jobs.findItems(jobname,QtCore.Qt.MatchCaseSensitive)
	1185
	1186	if ( item2int != [] ):
	1187	self.list_jobs.setCurrentItem(item2int[0])
	1188
	1189
[4405]	1190	# Update input and user code lists
	1191	def update_input(self):
[4470]	1192
	1193	self.labeltimer.stop()
	1194
[4405]	1195
	1196	self.list_input.clear()
	1197	self.list_user.clear()
	1198	self.list_monitoring.clear()
	1199	self.list_output.clear()
[4428]	1200
	1201	jobitem = self.list_jobs.currentItem()
	1202
	1203	if ( jobitem != None ):
	1204
	1205	job_to_show = job_dir + "/" + jobitem.text() + "/INPUT"
[4405]	1206
[4428]	1207	if ( os.path.isdir(job_to_show) ):
[4405]	1208
[4428]	1209	list_of_files = os.listdir(job_to_show)
[4405]	1210
[4428]	1211	for i in range(0,len(list_of_files)):
	1212	tmp_file = job_to_show + "/" + list_of_files[i]
[4405]	1213
[4428]	1214	if ( os.path.isfile(tmp_file) ):
[4470]	1215	self.list_input.addItem(str(list_of_files[i]) + " (" + file_size(tmp_file) + ")")
[4405]	1216
[4428]	1217	job_to_show = job_dir + "/" + jobitem.text() + "/USER_CODE"
[4405]	1218
[4428]	1219	if ( os.path.isdir(job_to_show) ):
[4405]	1220
[4428]	1221	list_of_files = os.listdir(job_to_show)
[4405]	1222
[4428]	1223	for i in range(0,len(list_of_files)):
	1224	tmp_file = job_to_show + "/" + list_of_files[i]
[4405]	1225
[4428]	1226	if ( os.path.isfile(tmp_file) ):
	1227	self.list_user.addItem(str(list_of_files[i]))
[4405]	1228
[4428]	1229	job_to_show = job_dir + "/" + jobitem.text() + "/MONITORING"
[4405]	1230
[4428]	1231	if ( os.path.isdir(job_to_show) ):
[4405]	1232
[4428]	1233	list_of_files = os.listdir(job_to_show)
[4405]	1234
[4428]	1235	for i in range(0,len(list_of_files)):
	1236	tmp_file = job_to_show + "/" + list_of_files[i]
[4405]	1237
[4428]	1238	if ( os.path.isfile(tmp_file) ):
[4470]	1239	self.list_monitoring.addItem(str(list_of_files[i]) + " (" + file_size(tmp_file) + ")")
[4405]	1240
[4428]	1241	job_to_show = job_dir + "/" + jobitem.text() + "/OUTPUT"
	1242
	1243	if ( os.path.isdir(job_to_show) ):
[4470]	1244
[4428]	1245	list_of_files = os.listdir(job_to_show)
[4470]	1246
[4428]	1247	for i in range(0,len(list_of_files)):
	1248	tmp_file = job_to_show + "/" + list_of_files[i]
[4405]	1249
[4428]	1250	if ( os.path.isfile(tmp_file) ):
[4470]	1251	self.list_output.addItem(str(list_of_files[i]) + " (" + file_size(tmp_file) + ")")
[4405]	1252
[4670]	1253	self.group_execution.findChild(QtWidgets.QLineEdit,"line_jobname").setText(jobitem.text())
	1254	self.group_history.findChild(QtWidgets.QListWidget,"list_jobname").clearSelection()
[4405]	1255
[4470]	1256	self.timetimer.start()
	1257	self.timer.start(update_frequency)
	1258	self.labeltimer.start(update_frequency/10)
	1259	self.push_update.setText("Update (" + str(int(update_frequency/1000/60)) + " min)")
[4670]	1260	QtWidgets.QApplication.processEvents()
[4470]	1261
[4405]	1262	# Change palmrunline accordingly
	1263	self.change_commandline("r","")
[4470]	1264	self.change_commandline("a","")
	1265
[4482]	1266	# Create a new (empty) job
	1267	def create_new_job(self):
	1268
	1269	self.setEnabled(False)
	1270
[4670]	1271	text, ret = QtWidgets.QInputDialog.getText(self, "Create new job", "Enter new job name:", QtWidgets.QLineEdit.Normal, text = '')
[4482]	1272
	1273	if ( ret ):
	1274	new_job_name = str(text)
	1275	else:
	1276	self.setEnabled(True)
	1277	return
	1278
	1279	new_input_dir = job_dir + "/" + new_job_name + "/INPUT"
	1280
	1281	# check if a job exists with the new job name. If not, the new job is created and an empty _p3d file is created.
	1282	if ( os.path.isdir(new_input_dir) ):
[4670]	1283	notify = QtWidgets.QMessageBox.warning(self,'Create new job directory',"Error. Could not create job directory. A job with the new name already exists.")
[4482]	1284	self.setEnabled(True)
	1285	return
	1286	else:
	1287	os.makedirs(new_input_dir)
	1288	os.mknod(new_input_dir + '/' + new_job_name + '_p3d')
	1289
	1290	# write default namelists into _p3d file
	1291	filename = open(new_input_dir + '/' + new_job_name + '_p3d', "w")
	1292	filename.write('&initialization_parameters\n nx = 39,\n ny = 39,\n nz = 40,\n dx = 50.0,\n dy = 50.0,\n dz = 50.0,\n/\n\n')
	1293	filename.write('&runtime_parameters\n end_time = 3600.0,\n/\n')
	1294	filename.close()
	1295
	1296
	1297	# create empty USER_CODE folder for convenience
	1298	new_user_dir = job_dir + "/" + new_job_name + "/USER_CODE"
	1299	os.makedirs(new_user_dir)
	1300
	1301
	1302	self.load_jobs()
	1303	self.list_input.clear()
	1304	self.list_user.clear()
	1305	self.list_monitoring.clear()
	1306	self.list_output.clear()
	1307	self.setEnabled(True)
	1308
	1309
[4405]	1310	# Make a copy of a job
	1311	def copy_job(self):
[4670]	1312
[4405]	1313	self.setEnabled(False)
	1314	old_job_name = self.list_jobs.currentItem().text()
	1315
[4670]	1316	text, ret = QtWidgets.QInputDialog.getText(self, "Copy job", "Enter new job name:", QtWidgets.QLineEdit.Normal, text = old_job_name)
[4405]	1317	if ( ret ):
	1318	new_job_name = str(text)
	1319	else:
[4670]	1320	self.setEnabled(True)
	1321	return
	1322
[4405]	1323	new_input_dir = job_dir + "/" + new_job_name + "/INPUT"
	1324
	1325	# check if a job exists with the new job name
	1326	if ( os.path.isdir(new_input_dir) ):
[4670]	1327	notify = QtWidgets.QMessageBox.warning(self,'Create new job directory',"Error. Could not create job directory. A job with the new name already exists.")
	1328	self.setEnabled(True)
	1329	return
[4405]	1330	else:
[4670]	1331	os.makedirs(new_input_dir)
[4405]	1332
	1333	# copy and rename input files (if present)
	1334	job_to_copy = job_dir + "/" + old_job_name + "/INPUT"
	1335
	1336	if ( os.path.isdir(job_to_copy) ):
	1337
	1338	list_of_files = os.listdir(job_to_copy)
[4482]	1339
[4405]	1340	for i in range(0,len(list_of_files)):
	1341
	1342	tmp_file = job_to_copy + "/" + list_of_files[i]
	1343	new_file = new_input_dir + "/" + list_of_files[i].replace(old_job_name, new_job_name)
	1344	shutil.copy(tmp_file, new_file)
	1345
	1346
	1347
	1348
	1349	new_user_dir = job_dir + "/" + new_job_name + "/USER_CODE"
[4482]	1350
[4405]	1351	# check if user code exists in the new job directory
	1352	if ( os.path.isdir(new_user_dir) ):
[4670]	1353	notify = QtWidgets.QMessageBox.warning(self,'Create new user code directory',"Error. Could not create user code directory. A user code directiory with the new name already exists.")
	1354	self.setEnabled(True)
	1355	return
[4405]	1356	else:
[4670]	1357	os.makedirs(new_user_dir)
[4405]	1358
	1359
	1360	# copy user code files (if present)
	1361	user_to_copy = job_dir + "/" + old_job_name + "/USER_CODE"
	1362
	1363	if ( os.path.isdir(user_to_copy) ):
	1364
	1365	list_of_files = os.listdir(user_to_copy)
	1366
	1367	for i in range(0,len(list_of_files)):
	1368
	1369	tmp_file = user_to_copy + "/" + list_of_files[i]
	1370	new_file = new_user_dir + "/" + list_of_files[i]
	1371	shutil.copy(tmp_file, new_file)
	1372
	1373	self.load_jobs()
	1374	self.list_input.clear()
	1375	self.list_user.clear()
	1376	self.list_monitoring.clear()
	1377	self.list_output.clear()
	1378	self.setEnabled(True)
	1379
	1380
	1381	# Create a whole set of jobs
	1382	def create_set(self):
	1383
	1384	global set_list
	1385	# disable mainwindow
	1386	self.setEnabled(False)
	1387
	1388	# show Options Dialog
	1389	opt = CreateSetBox()
	1390	opt.exec_()
	1391
	1392	old_job_name = self.list_jobs.currentItem().text()
	1393
	1394	for j in range(0,len(set_list)):
	1395
	1396	if ( set_list[j] != "" ):
	1397	new_job_name = str(set_list[j])
	1398	new_input_dir = job_dir + "/" + str(set_list[j]) + "/INPUT"
	1399	else:
	1400	continue
	1401
	1402	# check if a job exists with the new job name
	1403	if ( os.path.isdir(new_input_dir) ):
[4670]	1404	notify = QtWidgets.QMessageBox.warning(self,'Create new job directory',"Error. Could not create job directory. A job with the new name already exists.")
[4405]	1405	self.setEnabled(True)
	1406	return
	1407	else:
	1408	os.makedirs(new_input_dir)
	1409
	1410	# copy and rename input files (if present)
	1411	job_to_copy = job_dir + "/" + old_job_name + "/INPUT"
	1412
	1413	if ( os.path.isdir(job_to_copy) ):
	1414
	1415	list_of_files = os.listdir(job_to_copy)
	1416
	1417	for i in range(0,len(list_of_files)):
	1418
	1419	tmp_file = job_to_copy + "/" + list_of_files[i]
	1420	new_file = new_input_dir + "/" + list_of_files[i].replace(old_job_name, new_job_name)
	1421	shutil.copy(tmp_file, new_file)
	1422
	1423
	1424	new_user_dir = job_dir + "/" + new_job_name + "/USER_CODE"
[4670]	1425
[4405]	1426	# check if user code exists in the new job directory
	1427	if ( os.path.isdir(new_user_dir) ):
[4670]	1428	notify = QtWidgets.QMessageBox.warning(self,'Create new user code directory',"Error. Could not create user code directory. A user code directiory with the new name already exists.")
	1429	self.setEnabled(True)
	1430	return
[4405]	1431	else:
[4670]	1432	os.makedirs(new_user_dir)
[4405]	1433
	1434
	1435	# copy user code files (if present)
	1436	user_to_copy = job_dir + "/" + old_job_name + "/USER_CODE"
	1437
	1438	if ( os.path.isdir(user_to_copy) ):
	1439
	1440	list_of_files = os.listdir(user_to_copy)
	1441
	1442	for i in range(0,len(list_of_files)):
	1443
	1444	tmp_file = user_to_copy + "/" + list_of_files[i]
	1445	new_file = new_user_dir + "/" + list_of_files[i]
	1446	shutil.copy(tmp_file, new_file)
	1447
	1448	self.load_jobs()
	1449	self.list_input.clear()
	1450	self.list_user.clear()
	1451	self.list_monitoring.clear()
	1452	self.list_output.clear()
	1453
	1454	self.setEnabled(True)
	1455	set_list = []
[4470]	1456
	1457
	1458	# Add a custom context menu for the job selection list
	1459	def openmenujob(self, position):
	1460
[4670]	1461	menu = QtWidgets.QMenu()
[4470]	1462
[4482]	1463
[4670]	1464	newAction = QtWidgets.QAction('Create new job', self)
[4482]	1465	newAction.triggered.connect(self.create_new_job)
	1466	menu.addAction(newAction)
[4470]	1467	selection = self.list_jobs.selectedItems()
	1468
	1469	if ( len(selection) != 0 ):
	1470
[4482]	1471
[4670]	1472	copyAction = QtWidgets.QAction('Copy job', self)
[4470]	1473	copyAction.triggered.connect(self.copy_job)
[4670]	1474	createAction = QtWidgets.QAction('Create set from job', self)
[4470]	1475	createAction.triggered.connect(self.create_set)
[4670]	1476	delAction = QtWidgets.QAction('Delete job', self)
[4470]	1477	delAction.triggered.connect(self.DeleteJob)
	1478
	1479	menu.addAction(copyAction)
	1480	menu.addAction(createAction)
	1481	menu.addAction(delAction)
	1482
[4482]	1483	action = menu.exec_(self.list_jobs.mapToGlobal(position))
	1484
[4405]	1485	# Add a custom context menu
	1486	def openmenuinput(self, position):
	1487
[4670]	1488	menu = QtWidgets.QMenu()
[4405]	1489
	1490	selection = self.list_input.selectedItems()
[2413]	1491
[4405]	1492	if ( len(selection) != 0 ):
[2413]	1493
[4470]	1494
[4670]	1495	openAction = QtWidgets.QAction('Open file(s)', self)
[4405]	1496	openAction.setStatusTip('Open file(s) in your favorite editor')
	1497	openAction.triggered.connect(self.OpenFilesInput)
[4470]	1498
	1499
[4670]	1500	delAction = QtWidgets.QAction('Delete selected file(s)', self)
[4470]	1501	delAction.triggered.connect(self.DeleteFilesInput)
	1502
	1503	menu.addAction(openAction)
	1504	menu.addAction(delAction)
	1505
[4670]	1506	delallAction = QtWidgets.QAction('Delete all files', self)
[4482]	1507	delallAction.triggered.connect(self.DeleteAllFilesInput)
	1508	menu.addAction(delallAction)
[4405]	1509
[4482]	1510	action = menu.exec_(self.list_input.mapToGlobal(position))
	1511
[4405]	1512	# Add a custom context menu
	1513	def openmenuuser(self, position):
	1514
[4670]	1515	menu = QtWidgets.QMenu()
[4405]	1516
	1517	selection = self.list_user.selectedItems()
	1518
	1519	if ( len(selection) != 0 ):
	1520
[4670]	1521	openAction = QtWidgets.QAction('Open file(s)', self)
[4405]	1522	openAction.setStatusTip('Open file(s) in your favorite editor')
	1523	openAction.triggered.connect(self.OpenFilesUser)
[4470]	1524
	1525
[4670]	1526	delAction = QtWidgets.QAction('Delete file(s)', self)
[4470]	1527	delAction.triggered.connect(self.DeleteFilesUser)
	1528
	1529	menu.addAction(openAction)
	1530	menu.addAction(delAction)
[4405]	1531
[4670]	1532	delallAction = QtWidgets.QAction('Delete all files', self)
[4482]	1533	delallAction.triggered.connect(self.DeleteAllFilesUser)
	1534	menu.addAction(delallAction)
	1535
	1536	action = menu.exec_(self.list_user.mapToGlobal(position))
	1537
[4405]	1538	# Add a custom context menu
	1539	def openmenuoutput(self, position):
	1540
[4670]	1541	menu = QtWidgets.QMenu()
[4405]	1542
	1543	selection = self.list_output.selectedItems()
[4482]	1544
[4405]	1545	if ( len(selection) != 0 ):
	1546
[4670]	1547	openAction = QtWidgets.QAction('Open file(s)', self)
[4405]	1548	openAction.setStatusTip('Open file(s) in your favorite editor')
	1549	openAction.triggered.connect(self.OpenFilesOutput)
[4470]	1550
[4670]	1551	delAction = QtWidgets.QAction('Delete file(s)', self)
[4470]	1552	delAction.triggered.connect(self.DeleteFilesOutput)
	1553
[4482]	1554
	1555
[4470]	1556	menu.addAction(openAction)
	1557	menu.addAction(delAction)
[4405]	1558
[4670]	1559	delallAction = QtWidgets.QAction('Delete all files', self)
[4482]	1560	delallAction.triggered.connect(self.DeleteAllFilesOutput)
	1561	menu.addAction(delallAction)
	1562
	1563	action = menu.exec_(self.list_output.mapToGlobal(position))
	1564
[4405]	1565	# Add a custom context menu
	1566	def openmenumonitoring(self, position):
	1567
[4670]	1568	menu = QtWidgets.QMenu()
[4405]	1569
	1570	selection = self.list_monitoring.selectedItems()
	1571
	1572	if ( len(selection) != 0 ):
	1573
[4670]	1574	openAction = QtWidgets.QAction('Open file(s)', self)
[4405]	1575	openAction.setStatusTip('Open file(s) in your favorite editor')
	1576	openAction.triggered.connect(self.OpenFilesMonitoring)
[4470]	1577
[4670]	1578	delAction = QtWidgets.QAction('Delete file(s)', self)
[4470]	1579	delAction.triggered.connect(self.DeleteFilesMonitoring)
	1580
[4482]	1581
	1582
[4470]	1583	menu.addAction(openAction)
	1584	menu.addAction(delAction)
[4405]	1585
[4670]	1586	delallAction = QtWidgets.QAction('Delete all files', self)
[4482]	1587	delallAction.triggered.connect(self.DeleteAllFilesMonitoring)
	1588	menu.addAction(delallAction)
	1589
	1590	action = menu.exec_(self.list_monitoring.mapToGlobal(position))
	1591
[4470]	1592	def OpenConfig(self):
	1593
[4670]	1594	config = str(self.group_execution.findChild(QtWidgets.QComboBox, "combo_configuration").currentText())
[4470]	1595	if ( config != "" ):
	1596	filename = ".palm.config." + config
	1597	open_file = "xdg-open " + filename
	1598	os.system(str(open_file))
	1599
[4405]	1600	def OpenFilesInput(self):
	1601
	1602	sel_job = self.list_jobs.currentItem().text()
	1603	sel_files = self.list_input.selectedItems()
	1604
	1605	input_dir = job_dir + "/" + sel_job + "/INPUT/"
	1606
	1607	open_files = ""
	1608	for i in range(0,len(sel_files)):
[4470]	1609	open_files = open_files + "xdg-open " + input_dir + sel_files[i].text().split("(")[0] + "; "
[4405]	1610
	1611	os.system(str(open_files))
	1612
	1613	def OpenFilesUser(self):
	1614
	1615	sel_job = self.list_jobs.currentItem().text()
	1616	sel_files = self.list_user.selectedItems()
	1617
	1618	input_dir = job_dir + "/" + sel_job + "/USER_CODE/"
	1619
	1620	open_files = ""
	1621	for i in range(0,len(sel_files)):
	1622	open_files = open_files + "xdg-open " + input_dir + sel_files[i].text() + "; "
	1623
	1624	os.system(str(open_files))
	1625	selection = self.list_jobs.selectedItems()
	1626
	1627	def OpenFilesMonitoring(self):
	1628
	1629	sel_job = self.list_jobs.currentItem().text()
	1630	sel_files = self.list_monitoring.selectedItems()
	1631
	1632	input_dir = job_dir + "/" + sel_job + "/MONITORING/"
	1633
	1634	open_files = ""
	1635	for i in range(0,len(sel_files)):
[4470]	1636	open_files = open_files + "xdg-open " + input_dir + sel_files[i].text().split("(")[0] + "; "
[4405]	1637
	1638	os.system(str(open_files))
	1639	selection = self.list_jobs.selectedItems()
	1640
	1641	def OpenFilesOutput(self):
	1642
	1643	sel_job = self.list_jobs.currentItem().text()
	1644	sel_files = self.list_output.selectedItems()
	1645
	1646	input_dir = job_dir + "/" + sel_job + "/OUTPUT/"
	1647
	1648	open_files = ""
	1649	for i in range(0,len(sel_files)):
[4470]	1650	open_files = open_files + "xdg-open " + input_dir + sel_files[i].text().split("(")[0] + "; "
[4405]	1651
	1652	os.system(str(open_files))
	1653	selection = self.list_jobs.selectedItems()
[4470]	1654
	1655	def DeleteFilesInput(self):
	1656
[4670]	1657	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete these files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1658
[4670]	1659	if status == QtWidgets.QMessageBox.Yes:
[4470]	1660
	1661	sel_job = self.list_jobs.currentItem().text()
	1662	sel_files = self.list_input.selectedItems()
	1663
	1664	input_dir = job_dir + "/" + sel_job + "/INPUT/"
	1665
	1666	for i in range(0,len(sel_files)):
[4670]	1667	filename = input_dir + sel_files[i].text().split("(")[0].strip()
[4470]	1668	os.remove(filename)
	1669
	1670	self.update_all()
	1671
	1672
	1673	def DeleteFilesUser(self):
	1674
[4670]	1675	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete these files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1676
[4670]	1677	if status == QtWidgets.QMessageBox.Yes:
[4470]	1678
	1679	sel_job = self.list_jobs.currentItem().text()
	1680	sel_files = self.list_user.selectedItems()
	1681
[4481]	1682	input_dir = job_dir + "/" + sel_job + "/USER_CODE/"
[4470]	1683
	1684	for i in range(0,len(sel_files)):
[4670]	1685	filename = input_dir + sel_files[i].text().split("(")[0].strip()
[4470]	1686	os.remove(filename)
	1687
	1688	self.update_all()
	1689
	1690
	1691	def DeleteFilesMonitoring(self):
	1692
[4670]	1693	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete these files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1694
[4670]	1695	if status == QtWidgets.QMessageBox.Yes:
[4470]	1696
	1697	sel_job = self.list_jobs.currentItem().text()
	1698	sel_files = self.list_monitoring.selectedItems()
	1699
	1700	input_dir = job_dir + "/" + sel_job + "/MONITORING/"
	1701
	1702	for i in range(0,len(sel_files)):
[4670]	1703	filename = input_dir + sel_files[i].text().split("(")[0].strip()
[4470]	1704	os.remove(filename)
	1705
	1706	self.update_all()
	1707
	1708
	1709	def DeleteFilesOutput(self):
	1710
[4670]	1711	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete these files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1712
[4670]	1713	if status == QtWidgets.QMessageBox.Yes:
[4470]	1714
	1715	sel_job = self.list_jobs.currentItem().text()
	1716	sel_files = self.list_output.selectedItems()
	1717
	1718	input_dir = job_dir + "/" + sel_job + "/OUTPUT/"
	1719
	1720	for i in range(0,len(sel_files)):
[4670]	1721	filename = input_dir + sel_files[i].text().split("(")[0].strip()
[4470]	1722	os.remove(filename)
	1723
	1724	self.update_all()
	1725
[4482]	1726
	1727	def DeleteAllFilesInput(self):
	1728
[4670]	1729	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete all files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4482]	1730
[4670]	1731	if status == QtWidgets.QMessageBox.Yes:
[4482]	1732
	1733	check = self.list_jobs.currentItem()
	1734	if ( check ):
	1735	sel_job = self.list_jobs.currentItem().text()
	1736	sel_files = self.list_input.selectedItems()
	1737
	1738	input_dir = job_dir + "/" + sel_job + "/INPUT/"
	1739
	1740	if os.path.exists(str(input_dir)):
	1741	shutil.rmtree(str(input_dir))
	1742	os.makedirs(str(input_dir))
	1743
	1744	self.update_all()
	1745
	1746
	1747	def DeleteAllFilesUser(self):
	1748
[4670]	1749	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete all files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4482]	1750
[4670]	1751	if status == QtWidgets.QMessageBox.Yes:
[4482]	1752
	1753	check = self.list_jobs.currentItem()
	1754	if ( check ):
	1755	sel_job = self.list_jobs.currentItem().text()
	1756	sel_files = self.list_input.selectedItems()
	1757
	1758	input_dir = job_dir + "/" + sel_job + "/USER_CODE/"
	1759
	1760	if os.path.exists(str(input_dir)):
	1761	shutil.rmtree(str(input_dir))
	1762	os.makedirs(str(input_dir))
	1763
	1764	self.update_all()
	1765
	1766
	1767
	1768	def DeleteAllFilesOutput(self):
	1769
[4670]	1770	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete all files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4482]	1771
[4670]	1772	if status == QtWidgets.QMessageBox.Yes:
[4482]	1773
	1774	check = self.list_jobs.currentItem()
	1775	if ( check ):
	1776	sel_job = self.list_jobs.currentItem().text()
	1777	sel_files = self.list_input.selectedItems()
	1778
	1779	input_dir = job_dir + "/" + sel_job + "/OUTPUT/"
	1780
	1781	if os.path.exists(str(input_dir)):
	1782	shutil.rmtree(str(input_dir))
	1783	os.makedirs(str(input_dir))
	1784
	1785	self.update_all()
	1786
	1787
	1788
	1789	def DeleteAllFilesMonitoring(self):
	1790
[4670]	1791	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete all files?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4482]	1792
[4670]	1793	if status == QtWidgets.QMessageBox.Yes:
[4482]	1794
	1795	check = self.list_jobs.currentItem()
	1796	if ( check ):
	1797	sel_job = self.list_jobs.currentItem().text()
	1798	sel_files = self.list_input.selectedItems()
	1799
	1800	input_dir = job_dir + "/" + sel_job + "/MONITORING/"
	1801
	1802	if os.path.exists(str(input_dir)):
	1803	shutil.rmtree(str(input_dir))
	1804	os.makedirs(str(input_dir))
	1805
	1806	self.update_all()
	1807
	1808
	1809
[4470]	1810	def DeleteJob(self):
	1811
[4670]	1812	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete this job?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1813
[4670]	1814	if status == QtWidgets.QMessageBox.Yes:
[4470]	1815
	1816	sel_job = self.list_jobs.currentItem().text()
	1817
	1818	input_dir = job_dir + "/" + sel_job
	1819	shutil.rmtree(str(input_dir))
	1820
	1821	self.update_all()
	1822
[4405]	1823	# Message box for showing RUN_CONTROL output
[4670]	1824	class CreateSetBox(QtWidgets.QDialog):
[4405]	1825	def __init__(self):
[4470]	1826
[4405]	1827	super(CreateSetBox, self).__init__()
[4470]	1828
[4405]	1829	uic.loadUi(palm_bin + '/palmrungui_files/create_set.ui', self)
[4470]	1830
[4405]	1831	self.show()
[4470]	1832
[4405]	1833	return
	1834
	1835	# Cancel button
	1836	def rejected(self):
[4470]	1837
[4405]	1838	self.close()
[4470]	1839
[4405]	1840	return
	1841
	1842	# OK button
	1843	def accept(self):
[4470]	1844
[4405]	1845	global set_list
[4470]	1846
[4405]	1847	text = self.list.toPlainText()
	1848	set_list = text.split('\n')
	1849	self.close()
[4470]	1850
[4405]	1851	return
	1852
[4470]	1853	# Message box for showing RUN_CONTROL output
[4670]	1854	class OpenHistoryBox(QtWidgets.QDialog):
[4470]	1855	def __init__(self):
[4405]	1856
[4470]	1857	super(OpenHistoryBox, self).__init__()
[4405]	1858
[4470]	1859	uic.loadUi(palm_bin + '/palmrungui_files/history.ui', self)
	1860
	1861	if os.path.exists(palm_dir + "/.palmrungui.history"):
	1862	pass
	1863	else:
	1864	return
	1865
	1866	filename = open(palm_dir + "/.palmrungui.history","r")
	1867	history = filename.readlines()
	1868	filename.close()
	1869
	1870
[4670]	1871	list_jobname = self.findChild(QtWidgets.QListWidget,"list_history")
[4470]	1872
	1873	# Read history entries and append to recent job list
	1874	len_history=len(history)-1
	1875	i = 0
	1876	while i<=len_history:
	1877	list_jobname.addItem(history[i])
	1878	i = i + 1
	1879
	1880	self.show()
	1881
	1882	return
	1883
	1884	# Select item / activate Load button
	1885	def ItemSelected(self):
	1886
	1887	self.push_open.setEnabled(True)
	1888
	1889	return
	1890
	1891
	1892	# Load job from history
	1893	def OpenFromHistory(self):
	1894
	1895	global history_entry
	1896	history_entry = self.list_history.selectedItems()[0].text()
	1897
	1898	self.close()
	1899
	1900	return
	1901
	1902	# Close history window
	1903	def DiscardHistory(self):
	1904
[4481]	1905	global history_entry
	1906	history_entry = ""
[4470]	1907	self.close()
	1908
	1909	return
	1910
	1911	# Clear history
	1912	def ClearHistory(self):
	1913
[4670]	1914	status = QtWidgets.QMessageBox.question(self,'Delete Confirmation', "Are you sure you want to delete your history?", QtWidgets.QMessageBox.Yes \| QtWidgets.QMessageBox.No)
[4470]	1915
[4670]	1916	if status == QtWidgets.QMessageBox.Yes:
[4470]	1917
	1918	if os.path.exists(palm_dir + "/.palmrungui.history"):
	1919	os.remove(palm_dir + "/.palmrungui.history")
	1920
	1921
	1922	return
	1923
[2413]	1924	if __name__ == "__main__":
[4670]	1925	app = QtWidgets.QApplication(sys.argv)
[2413]	1926	window = Mainwindow()
	1927	window.show()
[2825]	1928	sys.exit(app.exec_())

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