1 | #!/bin/bash |
---|
2 | #--------------------------------------------------------------------------------# |
---|
3 | # This file is part of the PALM model system. |
---|
4 | # |
---|
5 | # PALM is free software: you can redistribute it and/or modify it under the terms |
---|
6 | # of the GNU General Public License as published by the Free Software Foundation, |
---|
7 | # either version 3 of the License, or (at your option) any later version. |
---|
8 | # |
---|
9 | # PALM is distributed in the hope that it will be useful, but WITHOUT ANY |
---|
10 | # WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR |
---|
11 | # A PARTICULAR PURPOSE. See the GNU General Public License for more details. |
---|
12 | # |
---|
13 | # You should have received a copy of the GNU General Public License along with |
---|
14 | # PALM. If not, see <http://www.gnu.org/licenses/>. |
---|
15 | # |
---|
16 | # Copyright 1997-2018 Leibniz Universitaet Hannover |
---|
17 | #--------------------------------------------------------------------------------# |
---|
18 | # |
---|
19 | # Current revisions: |
---|
20 | # ----------------- |
---|
21 | # |
---|
22 | # |
---|
23 | # Former revisions: |
---|
24 | # ----------------- |
---|
25 | # $Id: palmplot 3202 2018-08-22 06:54:52Z banzhafs $ |
---|
26 | # Unix-Shell has been changed to bash |
---|
27 | # |
---|
28 | # 2885 2018-03-14 11:02:46Z Giersch |
---|
29 | # assign configuration file within palmplot call |
---|
30 | # |
---|
31 | # 2837 2018-02-26 14:04:53Z gronemeier |
---|
32 | # Corrected "Former revisions" section |
---|
33 | # |
---|
34 | # 2696 2017-12-14 17:12:51Z kanani |
---|
35 | # Change in file header (GPL part) |
---|
36 | # |
---|
37 | # 1310 2014-03-14 08:01:56Z raasch |
---|
38 | # update GPL copyright |
---|
39 | # |
---|
40 | # 1046 2012-11-09 14:38:45Z maronga |
---|
41 | # code put under GPL (PALM 3.9) |
---|
42 | # |
---|
43 | # palmplot - script for running the NCL scripts |
---|
44 | # Using the available NCL scripts via the shell script palmplot |
---|
45 | |
---|
46 | # Last changes |
---|
47 | # 16/03/10 - Rieke - initial revision |
---|
48 | # 30/03/10 - Rieke - substituting double quotes (") with a character |
---|
49 | # variable (dq) containing double quotes |
---|
50 | # 31/03/10 - Rieke - list of variable names can be specified using |
---|
51 | # blank separated lists instead of comma |
---|
52 | # separated lists |
---|
53 | # 01/04/10 - Rieke - bugfix - treatment of special character * |
---|
54 | # in NCL variables containing lists corrected |
---|
55 | # 23/08/10 - Rieke - bugfix - "" had to be added in if-queries |
---|
56 | # 30/09/10 - Rieke - Link to new online documentation of PALM NCL scripts |
---|
57 | # 31/10/11 - Rieke - Adjustement so that palmplot also works on |
---|
58 | # DKRZ (ibmh) |
---|
59 | |
---|
60 | |
---|
61 | # SHORT INTRODUCTION FOR USING THIS SCRIPT |
---|
62 | if [[ "$1" = "?" || "$1" = "--help" || "$1" = "-h" ]] |
---|
63 | then |
---|
64 | (printf "\n palmplot is designed to run the NCL scripts of PALM \n" |
---|
65 | printf "\n palmplot can be called as follows:" |
---|
66 | printf "\n palmplot script_identifier file_1=OUTPUT/test.nc file_out=test format_out=pdf var='pt w\"pt\" w*pt* u' no_rows=2 ...\n" |
---|
67 | printf "\n script_identifier has to be one of the following:" |
---|
68 | printf "\n xy, xz, yz, pr, ts, sp" |
---|
69 | printf "\n in dependence on the data that wants to be plotted\n" |
---|
70 | printf "\n the further arguments control the plot" |
---|
71 | printf "\n they can also be set in the configuration file .ncl.config" |
---|
72 | printf "\n a documentation is available at" |
---|
73 | printf "\n http://palm.muk.uni-hannover.de/wiki/doc/app/ncl \n\n") |
---|
74 | exit |
---|
75 | fi |
---|
76 | |
---|
77 | |
---|
78 | # DEFINITION OF VARIABLES |
---|
79 | a="" |
---|
80 | arg="" |
---|
81 | b="" |
---|
82 | key="" |
---|
83 | script="" |
---|
84 | value="" |
---|
85 | CMDLINE="" |
---|
86 | STRINGPARAMS="" |
---|
87 | STRINGPARAMS_CO="" |
---|
88 | STRINGPARAMS_CS="" |
---|
89 | STRINGPARAMS_PR="" |
---|
90 | STRINGPARAMS_SP="" |
---|
91 | STRINGPARAMS_TS="" |
---|
92 | STRINGPARAMS_VA="" |
---|
93 | |
---|
94 | |
---|
95 | # LIST OF THE PARAMETERS OF THE NCL SCRIPTS WHICH NCL EXPECTED TO BE STRINGS |
---|
96 | # CO: PARAMETERS WHICH ARE COMMON FOR ALL NCL SCRIPTS |
---|
97 | # CS: cross_sections.ncl PR: profiles.ncl SP: spectra.ncl TS: timeseries.ncl |
---|
98 | # VA: PARAMETERS WHICH CONTAIN LISTS OF VARIABLE NAMES |
---|
99 | STRINGPARAMS_CO="file_1 format_out file_out var file_config " |
---|
100 | STRINGPARAMS_CS="sort mode fill_mode unit_x unit_y unit_z vec1 vec2 plotvec" |
---|
101 | STRINGPARAMS_PR="file_2 file_3 file_4 file_5 file_6 name_legend_1 name_legend_2 name_legend_3 name_legend_4 name_legend_5 name_legend_6 c_var" |
---|
102 | STRINGPARAMS_SP="sort unit_x unit_y" |
---|
103 | STRINGPARAMS_TS="unit_t" |
---|
104 | STRINGPARAMS_VA="var c_var vec1 vec2 plotvec" |
---|
105 | |
---|
106 | |
---|
107 | # CHOICE OF THE PARTICULAR NCL SCRIPT |
---|
108 | if [[ "$1" == "xy" ]] |
---|
109 | then |
---|
110 | script="cross_sections.ncl" |
---|
111 | STRINGPARAMS=$STRINGPARAMS_CO$STRINGPARAMS_CS |
---|
112 | CMDLINE="xyc=1 " |
---|
113 | elif [[ "$1" == "xz" ]] |
---|
114 | then |
---|
115 | script="cross_sections.ncl" |
---|
116 | STRINGPARAMS=$STRINGPARAMS_CO$STRINGPARAMS_CS |
---|
117 | CMDLINE="xzc=1 " |
---|
118 | elif [[ "$1" == "yz" ]] |
---|
119 | then |
---|
120 | script="cross_sections.ncl" |
---|
121 | STRINGPARAMS=$STRINGPARAMS_CO$STRINGPARAMS_CS |
---|
122 | CMDLINE="yzc=1 " |
---|
123 | elif [[ "$1" == "pr" ]] |
---|
124 | then |
---|
125 | script="profiles.ncl" |
---|
126 | STRINGPARAMS=$STRINGPARAMS_CO$STRINGPARAMS_PR |
---|
127 | elif [[ "$1" == "ts" ]] |
---|
128 | then |
---|
129 | script="timeseries.ncl" |
---|
130 | STRINGPARAMS=$STRINGPARAMS_CO$STRINGPARAMS_TS |
---|
131 | elif [[ "$1" == "sp" ]] |
---|
132 | then |
---|
133 | script="spectra.ncl" |
---|
134 | STRINGPARAMS=$STRINGPARAMS_CO$STRINGPARAMS_SP |
---|
135 | else |
---|
136 | (printf "\n first argument has to be one of the following:" |
---|
137 | printf "\n xy, xz, yz, pr, ts or sp \n" |
---|
138 | printf "\n type \"palmplot ?\" for information about the usage of this script\n") |
---|
139 | exit |
---|
140 | fi |
---|
141 | |
---|
142 | # SHIFTING THE FIRST COMMAND LINE ARGUMENT |
---|
143 | shift |
---|
144 | |
---|
145 | # PROCESSING THE COMMAND LINE ARGUMENTS |
---|
146 | while [ $# -gt 0 ] |
---|
147 | do |
---|
148 | arg=$1 |
---|
149 | key=${arg%%=*} |
---|
150 | value=${arg#*=} |
---|
151 | |
---|
152 | # ALLOWING RELATIVE AND ABSOLUTE FILE PATHS |
---|
153 | if [[ "$key" == @(file_*) && "$value" != @(~/*|/*) ]] |
---|
154 | then |
---|
155 | value=$PWD/$value |
---|
156 | fi |
---|
157 | |
---|
158 | # USE CONFIG FILE SPECIFIED BY USER |
---|
159 | if [ "$key" = "file_config" ] |
---|
160 | then |
---|
161 | if [ -f $value ] |
---|
162 | then |
---|
163 | use_user_config=true |
---|
164 | else |
---|
165 | printf "\n configuration file \"$value\" not found." |
---|
166 | printf "\n trying to use one of the standard configuraion files...\n" |
---|
167 | fi |
---|
168 | fi |
---|
169 | |
---|
170 | # PROCESSING STRINGS |
---|
171 | for a in $STRINGPARAMS |
---|
172 | do |
---|
173 | if [ "$key" = "$a" ] |
---|
174 | then |
---|
175 | |
---|
176 | # PROCESSING STRINGS CONTAINING LISTS OF VARIABLES |
---|
177 | for b in $STRINGPARAMS_VA |
---|
178 | do |
---|
179 | if [ "$key" = "$b" ] |
---|
180 | then |
---|
181 | if [[ "$value" != "all" ]] |
---|
182 | then |
---|
183 | # SUBSTITUTING BLANKS WITH COMMAS IN |
---|
184 | # PARAMETERS CONTAINING LISTS OF VARIABLES |
---|
185 | value=`echo $value | sed 's/ /,/g'` |
---|
186 | # ALLOWING THE USAGE OF COMMA SEPARATED LIST AS WELL |
---|
187 | |
---|
188 | if [[ "$value" == "${value#,}" ]] |
---|
189 | then |
---|
190 | value=,$value |
---|
191 | fi |
---|
192 | if [[ "$value" == "${value%,}" ]] |
---|
193 | then |
---|
194 | value=$value, |
---|
195 | fi |
---|
196 | value=${value/%\*,,/\*,} |
---|
197 | break |
---|
198 | fi |
---|
199 | fi |
---|
200 | done |
---|
201 | |
---|
202 | # SUBSTITUTING DOUBLE QUOTES - REQUIRED BY NCL |
---|
203 | value=`echo $value | sed 's/\"/\"+dq+\"/g'` |
---|
204 | # SETTING ENTIRE STRING IN DOUBLE QUOTES - REQUIRED BY NCL |
---|
205 | value=\"$value\" |
---|
206 | fi |
---|
207 | done |
---|
208 | |
---|
209 | CMDLINE=$CMDLINE"$key=$value " |
---|
210 | shift |
---|
211 | done |
---|
212 | |
---|
213 | # SET CONFIGURATION FILE TO ONE OF THE DEFAULT FILES IF NOT SPECIFIED BY USER |
---|
214 | if [ "$use_user_config" != true ] |
---|
215 | then |
---|
216 | key="file_config" |
---|
217 | |
---|
218 | if [ -f $PALM_BIN/../../.ncl.config ] |
---|
219 | then |
---|
220 | value="\"$PALM_BIN/../../.ncl.config\"" |
---|
221 | else |
---|
222 | value="\"$PALM_BIN/NCL/.ncl.config.default\"" |
---|
223 | fi |
---|
224 | |
---|
225 | CMDLINE=$CMDLINE"$key=$value " |
---|
226 | fi |
---|
227 | |
---|
228 | # EXECUTING THE PARTICULAR NCL SCRIPT |
---|
229 | cd $PALM_BIN/NCL |
---|
230 | ncl 'dq=str_get_dq()' $script $CMDLINE |
---|