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source: palm/trunk/SCRIPTS/palmbuild @ 2602

Last change on this file since 2602 was 2566, checked in by raasch, 7 years ago
palmrun adjusted for grid engine batch systems, informative messages reduced and reformatted
Property svn:executable set to ``* Property svn:keywords set to `Id`
File size: 30.7 KB

Line
1	#!/bin/bash
2
3	# palmbuild - script for compiling the PALM code and its utility programs
4
5	#------------------------------------------------------------------------------#
6	# This file is part of PALM.
7	#
8	# PALM is free software: you can redistribute it and/or modify it under the terms
9	# of the GNU General Public License as published by the Free Software Foundation,
10	# either version 3 of the License, or (at your option) any later version.
11	#
12	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
13	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
14	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
15	#
16	# You should have received a copy of the GNU General Public License along with
17	# PALM. If not, see <http://www.gnu.org/licenses/>.
18	#
19	# Copyright 2017 Leibniz Universitaet Hannover
20	#------------------------------------------------------------------------------#
21	#
22	# Current revisions:
23	# ------------------
24	#
25	#
26	# Former revisions:
27	# -----------------
28	# $Id: palmbuild 2566 2017-10-20 08:50:47Z hellstea $
29	# informative messages switched of almost completely in silent mode
30	# two header blocks merged into one
31	#
32	# 2506 2017-09-29 08:30:37Z raasch
33	# option -V added to check for an existing SOURCES_FOR_RUN_... folder
34	# host configuration added to SOURCES_FOR_RUN_... folder name
35	# SOURCES_FOR_RUN_... folder is deleted in case of compilation errors
36	# host_identifier renamed host_configuration
37	#
38	# 2500 2017-09-25 11:10:03Z raasch
39	# bugfix for r2492
40	#
41	# 2492 2017-09-21 14:18:48Z raasch
42	# ask for compilation, if SOURCES_FOR_RUN_... exists
43	#
44	# 2487 2017-09-21 11:30:10Z raasch
45	# bugfix: abort in case of compiling/linking errors in silent mode
46	#
47	# 2422 2017-09-08 08:25:41Z raasch
48	# initial revision
49	#
50	#------------------------------------------------------------------------------#
51	# palmbuild - script for compiling the PALM code and its utility programs
52	#
53	# Procedure to compile code on local and remote hosts using the
54	# make-mechanism. The source code must be provided on the local host.
55	#
56	# @note This script does not work on MAC OS
57	#------------------------------------------------------------------------------#
58
59
60	# VARIABLE DECLARATIONS + DEFAULT VALUES
61	calltime=""
62	column1=""
63	column2=""
64	host_configuration=default
65	locat=normal
66	makefile=""
67	make_options=""
68	module_commands=""
69	program_name=palm
70	remote_ip=""
71	silent=false
72	ssh_key=""
73	suf=f90
74	use_existing_sources_folder=false
75	version="palmbuild 1.0 Rev$Rev: 2316 $"
76	working_directory=`pwd`
77
78
79
80	# ERROR HANDLING
81	# IN CASE OF EXIT:
82	trap 'rm -rf ${source_path}/${host_configuration}_last_make_protocol
83	if [[ $locat != normal ]]
84	then
85	printf "\n\n +++ palmbuild killed \n\n"
86	exit 1
87	else
88	if [[ $silent = false ]]
89	then
90	printf "\n\n *** palmbuild finished \n\n"
91	fi
92	exit 0
93	fi
94	' exit
95
96
97	# IN CASE OF TERMINAL-BREAK:
98	trap 'printf "\n\n +++ palmbuild killed by \"^C\" \n\n"
99	rm ${source_path}/${host_configuration}_last_make_protocol
100	exit
101	' 2
102
103
104
105	# READ SHELLSCRIPT-OPTIONS
106	while getopts :d:h:m:s:S:uvV option
107	do
108	case $option in
109	(d) fname=$OPTARG;;
110	(h) host_configuration=$OPTARG;;
111	(m) makefile=$OPTARG;;
112	(s) suf=$OPTARG;;
113	(S) source_list="$OPTARG";;
114	(v) silent=true;;
115	(V) use_existing_sources_folder=true;;
116	(\?) printf "\n +++ unknown option $OPTARG \n";
117	locat=parameter; exit;;
118	esac
119	done
120
121
122	# BUILD THE CONFIGURATION-FILE NAME AND THE SOURCES_FOR_RUN-FOLDER NAME
123	config_file=.palm.config.$host_configuration
124	sources_for_run_catalog=SOURCES_FOR_RUN_${host_configuration}_$fname
125
126
127	# CHECK, IF CONFIGURATION-FILE EXISTS
128	if [[ ! -f $config_file ]]
129	then
130	printf "\n +++ configuration file: "
131	printf "\n $config_file"
132	printf "\n does not exist"
133	locat=configuration; exit
134	fi
135
136
137	# ### is this really required?
138	config_file=$PWD/$config_file
139
140
141	# READ VARIABLE SETTINGS FROM CONFIG FILE LINE BY LINE
142	while read line
143	do
144
145	# FIRST REPLACE ENVIRONMENT-VARIABLES BY THEIR RESPECTIVE VALUES
146	eval line=\"$line\"
147
148
149	# INTERPRET THE LINE
150	if [[ "$(echo $line)" = "" ]]
151	then
152
153	# EMPTY LINE, NO ACTION
154	continue
155
156	elif [[ "$(echo $line \| cut -c1)" = "#" ]]
157	then
158
159	# LINE IS A COMMENT LINE
160	continue
161
162	elif [[ "$(echo $line \| cut -c1)" = "%" ]]
163	then
164
165	# LINE DEFINES AN ENVIRONMENT-VARIABLE
166	var=`echo $line \| cut -d" " -s -f1 \| cut -c2-`
167	value=`echo $line \| cut -d" " -s -f2-`
168
169	# REPLACE ":" BY " " IN COMPILER- CPP- OR LINKER-OPTIONS,
170	# "::" IS REPLACED BY ":".
171	#value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
172
173
174	# VALUE FROM THE CONFIGURATION-FILE IS ASSIGNED TO THE
175	# ENVIRONMENT-VARIABLE, BUT ONLY IF NO VALUE HAS BEEN ALREADY
176	# ASSIGNED WITHIN THIS SCRIPT (E.G. BY SCRIPT-OPTIONS).
177	# NON-ASSIGNED VARIABLES HAVE VALUE "" OR 0 (IN CASE OF INTEGER).
178	# HENCE THE GENERAL RULE IS: SCRIPT-OPTION OVERWRITES THE
179	# CONFIGURATION-FILE.
180	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
181	then
182	eval export $var="\$value"
183
184	# TERMINAL OUTPUT OF ENVIRONMENT-VARIABLES, IF TRACEBACK IS SWITCHED on
185	if [[ $do_trace = true ]]
186	then
187	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
188	fi
189	fi
190
191	else
192
193	# SKIP ALL OTHER LINES
194	continue
195
196	fi
197
198	done < $config_file
199
200
201	# CHECK, IF THE BASE DIRECTORY PATH HAS BEEN GIVEN
202	if [[ "$base_directory" = "" ]]
203	then
204	printf "\n +++ no base directory found in configuration file"
205	locat=config_file; exit
206	else
207	if [[ ! -d $base_directory ]]
208	then
209	printf "\n\n +++ base directory \"$base_directory\" "
210	printf "\n does not exist"
211	locat=source_path; exit
212	fi
213	fi
214
215
216	# CHECK SOURCE-CODE PATH
217	if [[ "$source_path" = "" ]]
218	then
219	printf "\n +++ no source path found in configuration file"
220	locat=config_file; exit
221	else
222	if [[ ! -d $source_path ]]
223	then
224	printf "\n\n +++ source path \"$source_path\" "
225	printf "\n does not exist"
226	locat=source_path; exit
227	fi
228	fi
229
230
231	# CHECK MAKEFILE
232	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
233	if [[ ! -f $makefile ]]
234	then
235	printf "\n +++ makefile: "
236	printf "\n $makefile"
237	printf "\n does not exist"
238	locat=makefile; exit
239	fi
240
241
242	# CHECK COMPILERNAME
243	if [[ "$compiler_name" = "" ]]
244	then
245	printf "\n +++ no compiler name found in configuration file"
246	locat=config_file; exit
247	fi
248
249
250	# CHECK SERIAL COMPILERNAME
251	if [[ "$compiler_name_ser" = "" ]]
252	then
253	printf "\n +++ no compiler name for serial compilation in configuration file"
254	locat=config_file; exit
255	fi
256
257
258	# DETERMINE SSH-KEY TO BE USED
259	if [[ "$ssh_key" != "" ]]
260	then
261	ssh_key="-i $HOME/.ssh/`echo $line \| cut -d" " -s -f2`"
262	fi
263
264
265	#CHECK CPP-OPTIONS
266	if [[ "$cpp_options" = "" ]]
267	then
268	printf "\n +++ WARNING: no cpp-options found in configuration file"
269	fi
270
271
272	# CHECK SETTINGS IN CASE OF COMPILING ON REMOTE MACHINE
273	if [[ "$remote_ip" != "" ]]
274	then
275
276	if [[ "$remote_username" = "" ]]
277	then
278	printf "\n +++ no user name given in configuration file"
279	locat=config_file; exit
280	fi
281
282	# GET SOURCE AND DEPOSITORY PATH ON THE REMOTE MACHINE WITHOUT EVALUATING
283	# THE $
284	# IF NOT GIVEN, USE THE LOCAL SOURCE AND DEPOSITORY PATH
285	line=`grep %remote_source_path $config_file`
286	if [[ "$line" != "" ]]
287	then
288	remote_source_path=`echo $line \| cut -d" " -s -f2`
289	else
290	line=`grep %source_path $config_file`
291	remote_source_path=`echo $line \| cut -d" " -s -f2`
292	fi
293
294	line=`grep %base_directory $config_file`
295	make_depository=`echo $line \| cut -d" " -s -f2`/MAKE_DEPOSITORY_${host_configuration}
296
297	else
298
299	make_depository=${base_directory}/MAKE_DEPOSITORY_${host_configuration}
300
301	fi
302
303	# HEADER-OUTPUT (PART1: MESSAGES CONCERNING THE LOCAL HOST)
304	if [[ $silent = false ]]
305	then
306	calltime=$(date)
307	printf "\n"
308	printf "#------------------------------------------------------------------------# \n"
309	printf "\| %-40s%30s \| \n" "$version" "$calltime"
310	printf "\| \| \n"
311	printf "\| %-13s%-57s \| \n" "called on:" "$(hostname) (IP:$local_ip)"
312	column2=$(echo $config_file \| cut -c1-57 )
313	printf "\| %-13s%-57s \| \n" "config file:" "$column2"
314	line=$(echo "$config_file" \| cut -c58-)
315	while [[ "$line" != "" ]]
316	do
317	column1=""
318	column2=$(echo $line \| cut -c1-57 )
319	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
320	line=$(echo "$line" \| cut -c58-)
321	done
322	column2=$(echo $makefile \| cut -c1-57 )
323	printf "\| %-13s%-57s \| \n" "makefile:" "$column2"
324	line=$(echo "$makefile" \| cut -c58-)
325	while [[ "$line" != "" ]]
326	do
327	column1=""
328	column2=$(echo $line \| cut -c1-57 )
329	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
330	line=$(echo "$line" \| cut -c58-)
331	done
332	column2=$(echo $source_path \| cut -c1-57 )
333	printf "\| %-13s%-57s \| \n" "source path:" "$column2"
334	line=$(echo "$source_path" \| cut -c58-)
335	while [[ "$line" != "" ]]
336	do
337	column1=""
338	column2=$(echo $line \| cut -c1-57 )
339	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
340	line=$(echo "$line" \| cut -c58-)
341	done
342	printf "\| \| \n"
343
344	if [[ "$remote_ip" != "" ]]
345	then
346	column2="$host_configuration"
347	printf "\| %-20s%-50s \| \n" "host configuration:" "$column2"
348	column2=$(echo "$make_depository" \| cut -c1-50 )
349	printf "\| %-20s%-50s \| \n" "remote depository:" "$column2"
350	else
351	column2="$host_configuration"
352	printf "\| %-20s%-50s \| \n" "host identifier:" "$column2"
353	column2=$(echo "$make_depository" \| cut -c1-50 )
354	printf "\| %-20s%-50s \| \n" "local depository:" "$column2"
355	fi
356	line=$(echo "$make_depository" \| cut -c51-)
357	while [[ "$line" != "" ]]
358	do
359	column1=""
360	column2=$(echo "$line" \| cut -c1-50 )
361	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
362	line=$(echo "$line" \| cut -c51-)
363	done
364
365	if [[ "$remote_ip" != "" ]]
366	then
367	printf "\| %-20s%-50s \| \n" "remote username:" "$remote_username"
368	printf "\| %-20s%-50s \| \n" "remote address:" "$remote_ip"
369	else
370	printf "\| %-20s%-50s \| \n" "username:" "$local_username"
371	printf "\| %-20s%-50s \| \n" "address:" "$local_ip"
372	fi
373
374	printf "\| %-20s%-50s \| \n" "compiler:" "$compiler_name"
375	printf "\| %-20s%-50s \| \n" "serial compiler:" "$compiler_name_ser"
376
377	if [[ "$make_options" != "" ]]
378	then
379	printf "\| %-20s%-50s \| \n" "make options:" "$make_options"
380	fi
381	column2=$(echo "$cpp_options" \| cut -c1-50 )
382	printf "\| %-20s%-50s \| \n" "cpp options:" "$column2"
383	line=$(echo "$cpp_options" \| cut -c51-)
384	while [[ "$line" != "" ]]
385	do
386	column1=""
387	column2=$(echo "$line" \| cut -c1-50 )
388	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
389	line=$(echo "$line" \| cut -c51-)
390	done
391	column2=$(echo "$compiler_options" \| cut -c1-50 )
392	printf "\| %-20s%-50s \| \n" "compiler options:" "$column2"
393	line=$(echo "$compiler_options" \| cut -c51-)
394	while [[ "$line" != "" ]]
395	do
396	column1=""
397	column2=$(echo "$line" \| cut -c1-50 )
398	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
399	line=$(echo "$line" \| cut -c51-)
400	done
401	column2=$(echo "$linker_options" \| cut -c1-50 )
402	printf "\| %-20s%-50s \| \n" "linker options:" "$column2"
403	line=$(echo "$linker_options" \| cut -c51-)
404	while [[ "$line" != "" ]]
405	do
406	column1=""
407	column2=$(echo "$line" \| cut -c1-50 )
408	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
409	line=$(echo "$line" \| cut -c51-)
410	done
411	if [[ "$login_init_cmd" != "" ]]
412	then
413	column2=$(echo "$login_init_cmd" \| cut -c1-50 )
414	printf "\| %-20s%-50s \| \n" "login init command:" "$column2"
415	line=$(echo "$login_init_cmd" \| cut -c51-)
416	while [[ "$line" != "" ]]
417	do
418	column1=""
419	column2=$(echo "$line" \| cut -c1-50 )
420	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
421	line=$(echo "$line" \| cut -c51-)
422	done
423	fi
424	if [[ "$module_commands" != "" ]]
425	then
426	column2=$(echo "$module_commands" \| cut -c1-50 )
427	printf "\| %-20s%-50s \| \n" "module command(s):" "$column2"
428	line=$(echo "$module_commands" \| cut -c51-)
429	while [[ "$line" != "" ]]
430	do
431	column1=""
432	column2=$(echo "$line" \| cut -c1-50 )
433	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
434	line=$(echo "$line" \| cut -c51-)
435	done
436	fi
437	printf "#------------------------------------------------------------------------# \n"
438
439	answer=dummy
440	printf "\n"
441	while [[ "$answer" != y && "$answer" != Y && "$answer" != c && "$answer" != C && "$answer" != s && "$answer" != S && "$answer" != a && "$answer" != A ]]
442	do
443	printf " >>> continue (y(es)/c(ontinue)/a(bort)) ? "
444	read answer
445	done
446	if [[ $answer = a \|\| $answer = A ]]
447	then
448	locat=user_abort; exit
449	fi
450	if [[ $answer = c \|\| $answer = C ]]
451	then
452	silent=true
453	fi
454	fi
455
456
457	# TAR THE SOURCES AND MAKEFILES
458	# UTILITIES ARE TEMPORARILY COPIED TO THE SOURCE DIRECTORY IN ORDER TO TAR
459	# THEM TOO
460	if [[ $silent = false ]]
461	then
462	printf "\n\n *** tar of makefile and source files in"
463	printf "\n $source_path\n"
464	fi
465	cd $source_path
466	cp -p ../UTIL/combine_plot_fields.f90 .
467	cp -p ../UTIL/compare_palm_logs.f90 .
468	cp -p ../UTIL/Makefile_utilities .
469	tar -cf ${program_name}_sources.tar Makefile* *.$suf
470	rm combine_plot_fields.f90 compare_palm_logs.f90 Makefile_utilities
471
472
473	# MAKE ON REMOTE HOST
474	if [[ "$remote_ip" != "" ]]
475	then
476
477	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_...
478	if [[ "$fname" = "" ]]
479	then
480
481	# COPY CURRENT SOURCE CODE TO SOURCE-CODE DIRECTORY ON THE REMOTE HOST
482	# CREATE THIS DIRECTORY, IF IT DOES NOT EXIST
483	if [[ $silent = false ]]
484	then
485	echo " "
486	echo " *** copying \"${program_name}_sources.tar\" to \"${remote_ip}:${make_depository}/\" "
487	echo "[[ ! -d ${make_depository} ]] && (echo \" *** ${make_depository} will be created\"; mkdir -p ${make_depository})" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
488	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar
489	else
490	echo "[[ ! -d ${make_depository} ]] && mkdir -p ${make_depository}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
491	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar > /dev/null
492	fi
493
494
495
496
497	# UNTAR PREVIOUS UPDATE ON REMOTE HOST, IF EXISTING
498	if [[ $silent = false ]]
499	then
500	echo " *** untar previous update on remote host, if existing"
501	fi
502	echo "cd ${make_depository}; [[ -f ${program_name}_current_version.tar ]] && tar -xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
503
504
505	# UNTAR CURRENT SOURCES ON REMOTE HOST
506	if [[ $silent = false ]]
507	then
508	echo " *** untar current sources on remote host"
509	fi
510	echo "cd ${make_depository}; tar -xf ${program_name}_sources.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
511
512
513	# CREATE INIT AND MODULE COAMMNDS
514	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
515	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
516
517
518	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
519	if [[ $silent = false ]]
520	then
521	echo " "
522	echo " *** creating utilities on remote host"
523	fi
524	make_call_string="make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
525	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
526
527	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
528	then
529	printf "\a\n +++ error(s) occurred during compiling or linking of utilities"
530	printf "\n for host configuration \"$host_configuration\" "
531	if [[ $silent = false ]]
532	then
533	answer=dummy
534	printf "\n"
535	while [[ "$answer" != c && "$answer" != k ]]
536	do
537	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
538	read answer
539	if [[ "$answer" = l ]]
540	then
541	more ${host_configuration}_last_make_protocol
542	fi
543	done
544	if [[ $answer = k ]]
545	then
546	locat=user_abort; exit
547	fi
548	else
549	# ABORT ANYWAY
550	locat=user_abort; exit
551	fi
552	fi
553
554
555	# NOW COMPILE THE PALM CODE
556	# COMMANDS WILL BE COMMUNICATED TO SSH VIA PIPE, SINCE THIS WAY THE SYSTEM- AND
557	# USER-PROFILES OF THE SHELL ARE COMPLETELY EXECUTED (OTHERWISE, MAKE
558	# MAY E.G. MISS THE COMPILER-PATHS)
559	if [[ $silent = false ]]
560	then
561	echo " "
562	echo " *** compile PALM sources on remote host"
563	fi
564	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
565	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
566
567	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
568	then
569	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
570	if [[ $silent = false ]]
571	then
572	answer=dummy
573	printf "\n"
574	while [[ "$answer" != c && "$answer" != k ]]
575	do
576	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
577	read answer
578	if [[ "$answer" = l ]]
579	then
580	more ${host_configuration}_last_make_protocol
581	fi
582	done
583	if [[ $answer = k ]]
584	then
585	locat=user_abort; exit
586	fi
587	else
588	# ABORT ANYWAY
589	locat=user_abort; exit
590	fi
591	fi
592
593	# TAR UPDATED VERSION ON THE REMOTE HOST
594	if [[ $silent = false ]]
595	then
596	printf "\n *** tar update on remote host ..."
597	fi
598	echo "cd ${make_depository}; chmod u+w ; tar -cf ${program_name}_current_version.tar ${program_name} .f90 .o .mod *.x" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
599
600
601	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
602	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
603	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
604	elif [[ "$fname" != "" ]]
605	then
606
607	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
608	# AND ASK, IF THEY SHALL BE USED
609	echo "[[ -d ${fast_io_catalog}/${sources_for_run_catalog} ]] && echo sources for run found" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 > ${host_configuration}_last_make_protocol
610	if [[ $(grep -c "sources for run found" ${host_configuration}_last_make_protocol) != 0 && $use_existing_sources_folder = true ]]
611	then
612	printf "\a\n *** compiled sources for run \"$fname\" found on remote host in folder"
613	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
614	printf "\n will be used!"
615	exit
616	fi
617
618	# COPY MAKE DEPOSITORY ON REMOTE MACHINE TO SOURCES_FOR_RUN_...
619	if [[ $silent = false ]]
620	then
621	printf "\n *** copy MAKE_DEPOSITORY_${host_configuration} on remote host to $sources_for_run_catalog \n"
622	fi
623	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}; mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}; cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}; cd ${fast_io_catalog}/${sources_for_run_catalog}; tar xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
624
625
626	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_... ON THE REMOTE MACHINE
627	if [[ $silent = false ]]
628	then
629	printf "\n *** copy ${base_directory}/${sources_for_run_catalog}"
630	printf "\n to $sources_for_run_catalog on remote host \n"
631	fi
632	scp -q $ssh_key ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${remote_username}@${remote_ip}:${fast_io_catalog}/${sources_for_run_catalog}
633
634
635	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
636	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
637	then
638
639	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
640	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
641	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
642	if [[ $silent = false ]]
643	then
644	echo " *** execute \"make\" on remote host"
645	fi
646	echo "$login_init_cmd $module_commands cd ${fast_io_catalog}/${sources_for_run_catalog}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
647
648	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
649	then
650	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
651	if [[ $silent = false ]]
652	then
653	answer=dummy
654	printf "\n"
655	while [[ "$answer" != c && "$answer" != k ]]
656	do
657	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
658	read answer
659	if [[ "$answer" = l ]]
660	then
661	more ${host_configuration}_last_make_protocol
662	fi
663	done
664	if [[ $answer = k ]]
665	then
666	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
667	locat=user_abort; exit
668	fi
669	else
670	# ABORT ANYWAY
671	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
672	locat=user_abort; exit
673	fi
674	fi
675
676	else
677
678	echo " *** nothing to compile for this run"
679
680	fi
681
682	fi
683
684	rm -rf ${source_path}/${host_configuration}_last_make_protocol
685
686
687	# MAKE ON LOCAL HOST
688	else
689
690
691	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_... ON THE
692	# LOCAL HOST
693	if [[ "$fname" = "" ]]
694	then
695
696	# SET THE ENVIRONMENT (EXECUTE INIT AND MODULE COMMANDS)
697	if [[ "$login_init_cmd" != "" ]]
698	then
699	$login_init_cmd
700	fi
701
702	if [[ "$module_commands" != "" ]]
703	then
704	$module_commands
705	fi
706
707
708	# CREATE MAKE-DEPOSITORY, IF IT DOES NOT EXIST
709	eval make_depository=$make_depository
710	if [[ ! -d $make_depository ]]
711	then
712	if mkdir -p $make_depository
713	then
714	if [[ $silent = false ]]
715	then
716	printf "\n\n *** directory for local make depository:"
717	printf "\n $make_depository"
718	printf "\n was created\n"
719	fi
720	else
721	printf "\n +++ directory for local make depository:"
722	printf "\n $make_depository"
723	printf "\n cannot be created"
724	locat=local_depository; exit
725	fi
726	fi
727
728	# COPY SOURCE-CODE FROM REPOSITORY TO MAKE-DEPOSITORY
729	if [[ $silent = false ]]
730	then
731	echo " "
732	echo " *** untar current source sources on local host in"
733	echo " $make_depository"
734	fi
735	cd $make_depository
736	cp $source_path/${program_name}_sources.tar .
737	tar xf ${program_name}_sources.tar
738
739
740	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
741	if [[ $silent = false ]]
742	then
743	echo " "
744	echo " *** creating utilities on local host"
745	fi
746	make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
747
748
749	# CALL MAKE ON LOCAL HOST USING THE OPTIONS DETERMINED FURTHER ABOVE
750	if [[ $silent = false ]]
751	then
752	echo " "
753	echo " *** compile PALM sources on local host"
754	fi
755
756	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options" 2>&1 \| tee ${host_configuration}_last_make_protocol
757
758	if [[ $? != 0 ]]
759	then
760	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
761	if [[ $silent = false ]]
762	then
763	answer=dummy
764	printf "\n"
765	while [[ "$answer" != c && "$answer" != k ]]
766	do
767	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
768	read answer
769	if [[ "$answer" = l ]]
770	then
771	more ${host_configuration}_last_make_protocol
772	fi
773	done
774	if [[ $answer = k ]]
775	then
776	locat=user_abort; exit
777	fi
778	else
779	# ABORT ANYWAY
780	locat=user_abort; exit
781	fi
782	fi
783
784
785	# TAR NEW VERSION ON LOCAL HOST
786	if [[ $silent = false ]]
787	then
788	printf "\n *** tar update on local host ..."
789	fi
790	tar -cf ${program_name}_current_version.tar ${program_name} .$suf .o .mod .x
791
792	else
793
794	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
795	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
796	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
797
798	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
799	# AND ASK, IF THEY SHALL BE USED
800	if [[ -d ${fast_io_catalog}/${sources_for_run_catalog} && $use_existing_sources_folder = true ]]
801	then
802	printf "\a\n *** compiled sources for run \"$fname\" found on local host in folder"
803	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
804	printf "\n will be used!"
805	exit
806	fi
807
808	# SECOND CHECK, IF A DEPOSITORY EXISTS ON THE LOCAL MACHINE
809	if [[ ! -d ${make_depository} ]]
810	then
811	printf "\n +++ directory for local make depository:"
812	printf "\n $make_depository"
813	printf "\n not found. Please run \"palmbuild -h $host_configuration\" "
814	locat=make_depository; exit
815	fi
816
817
818	# COPY MAKE DEPOSITORY ON LOCAL MACHINE TO SOURCES_FOR_RUN_...
819	if [[ $silent = false ]]
820	then
821	printf "\n *** copy MAKE_DEPOSITORY_${host_configuration} on local host to "
822	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} \n"
823	fi
824	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
825	mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}
826	cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}
827	cd $fast_io_catalog/${sources_for_run_catalog}
828	tar xf ${program_name}_current_version.tar
829
830
831	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_...
832	# IN THE FAST_IO_CATALOG ON THE LOCAL MACHINE
833	if [[ $silent = false ]]
834	then
835	printf "\n *** copy ${base_directory}/${sources_for_run_catalog} to"
836	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} on local host \n"
837	fi
838	cp ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${fast_io_catalog}/${sources_for_run_catalog}
839
840
841	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
842	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
843	then
844
845	if [[ $silent = false ]]
846	then
847	echo " *** execute \"make\" on local host"
848	fi
849	[[ "$login_init_cmd" != "" ]] && $login_init_cmd
850	[[ "$module_commands" != "" ]] && $module_commands
851
852	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
853
854	if [[ $? != 0 ]]
855	then
856
857	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
858	if [[ $silent = false ]]
859	then
860	answer=dummy
861	printf "\n"
862	while [[ "$answer" != c && "$answer" != k ]]
863	do
864	printf " >>> continue / kill palmbuild (c/k) ? "
865	read answer
866	done
867	if [[ $answer = k ]]
868	then
869	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
870	locat=user_abort; exit
871	fi
872	else
873	# ABORT ANYWAY
874	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
875	locat=user_abort; exit
876	fi
877	fi
878
879	else
880
881	echo " *** nothing to compile for this run"
882
883	fi
884
885	fi
886	fi

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