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source: palm/trunk/SCRIPTS/palmbuild @ 3355

Last change on this file since 3355 was 3312, checked in by knoop, 6 years ago
Added proper exit code to PALM and fixed exit code handling by palmbuild and palmrun
Property svn:executable set to ``* Property svn:keywords set to `Id Rev`
File size: 32.9 KB

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1	#!/bin/bash
2
3	# palmbuild - script for compiling the PALM code and its utility programs
4
5	#------------------------------------------------------------------------------#
6	# This file is part of the PALM model system.
7	#
8	# PALM is free software: you can redistribute it and/or modify it under the terms
9	# of the GNU General Public License as published by the Free Software Foundation,
10	# either version 3 of the License, or (at your option) any later version.
11	#
12	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
13	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
14	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
15	#
16	# You should have received a copy of the GNU General Public License along with
17	# PALM. If not, see <http://www.gnu.org/licenses/>.
18	#
19	# Copyright 2017-2018 Leibniz Universitaet Hannover
20	#------------------------------------------------------------------------------#
21	#
22	# Current revisions:
23	# ------------------
24	#
25	#
26	# Former revisions:
27	# -----------------
28	# $Id: palmbuild 3312 2018-10-06 14:15:46Z knoop $
29	# "host identifier" in header output renamed "config. identifier",
30	# host_configuration renamed configuration_identifier,
31	# jobname renamed run_identifier
32	# header output of PALM code revision,
33	# options -m, -s, and -S removed
34	#
35	# 3210 2018-08-28 07:31:13Z sward
36	# Bugfix: agent_preprocessing stays in MAKE_DEPOSITORY after compilation
37	#
38	# 3208 2018-08-27 13:10:50Z sward
39	# Added building of agent_preprocessing
40	#
41	# 3033 2018-05-23 15:26:19Z raasch
42	# "fname" renamed to "jobname"
43	#
44	# 2718 2018-01-02 08:49:38Z maronga
45	# Corrected "Former revisions" section
46	#
47	# 2696 2017-12-14 17:12:51Z kanani
48	# Change in file header (GPL part)
49	#
50	# 2566 2017-10-20 08:50:47Z raasch
51	# informative messages switched of almost completely in silent mode
52	# two header blocks merged into one
53	#
54	# 2506 2017-09-29 08:30:37Z raasch
55	# option -V added to check for an existing SOURCES_FOR_RUN_... folder
56	# host configuration added to SOURCES_FOR_RUN_... folder name
57	# SOURCES_FOR_RUN_... folder is deleted in case of compilation errors
58	# host_identifier renamed host_configuration
59	#
60	# 2500 2017-09-25 11:10:03Z raasch
61	# bugfix for r2492
62	#
63	# 2492 2017-09-21 14:18:48Z raasch
64	# ask for compilation, if SOURCES_FOR_RUN_... exists
65	#
66	# 2487 2017-09-21 11:30:10Z raasch
67	# bugfix: abort in case of compiling/linking errors in silent mode
68	#
69	# 2422 2017-09-08 08:25:41Z raasch
70	# initial revision
71	#
72	#------------------------------------------------------------------------------#
73	# palmbuild - script for compiling the PALM code and its utility programs
74	#
75	# Procedure to compile code on local and remote hosts using the
76	# make-mechanism. The source code must be provided on the local host.
77	#
78	# @note This script does not work on MAC OS
79	#------------------------------------------------------------------------------#
80
81
82	# VARIABLE DECLARATIONS + DEFAULT VALUES
83	calltime=""
84	column1=""
85	column2=""
86	configuration_identifier=default
87	global_revision=""
88	locat=normal
89	makefile=""
90	make_options=""
91	module_commands=""
92	program_name=palm
93	remote_ip=""
94	silent=false
95	ssh_key=""
96	suf=f90
97	use_existing_sources_folder=false
98	version="palmbuild 1.0 Rev$Rev: 3312 $"
99	working_directory=`pwd`
100
101
102	# ERROR HANDLING IN CASE OF EXIT
103	trap 'rm -rf ${source_path}/${configuration_identifier}_last_make_protocol
104	if [[ $locat != normal && $locat != control_c ]]
105	then
106	printf "\n\n+++ palmbuild crashed \n\n"
107	exit 1
108	elif [[ $locat != normal ]]
109	then
110	printf "\n+++ palmbuild killed by \"^C\" \n\n"
111	exit 2
112	else
113	if [[ $silent = false ]]
114	then
115	printf "\n --> palmbuild finished\n\n"
116	fi
117	exit 0
118	fi' exit
119
120
121	# ACTIONS IN CASE OF TERMINAL-BREAK (CONTROL-C):
122	trap 'locat=control_c
123	exit 1
124	' 2
125
126
127
128	# READ SHELLSCRIPT-OPTIONS
129	while getopts :d:h:uvV option
130	do
131	case $option in
132	(d) run_identifier=$OPTARG;;
133	(h) configuration_identifier=$OPTARG;;
134	(v) silent=true;;
135	(V) use_existing_sources_folder=true;;
136	(\?) printf "\n +++ unknown option $OPTARG \n";
137	locat=parameter; exit;;
138	esac
139	done
140
141
142	# FOR COMPATIBILITY REASONS SET OLD ENVIRONMENT VARIABLES
143	export fname=$run_identifier
144	export jobname=$run_identifier
145
146
147	# BUILD THE CONFIGURATION-FILE NAME AND THE SOURCES_FOR_RUN-FOLDER NAME
148	config_file=.palm.config.$configuration_identifier
149	sources_for_run_catalog=SOURCES_FOR_RUN_${configuration_identifier}_$run_identifier
150
151
152	# CHECK, IF CONFIGURATION-FILE EXISTS
153	if [[ ! -f $config_file ]]
154	then
155	printf "\n +++ configuration file: "
156	printf "\n $config_file"
157	printf "\n does not exist"
158	locat=configuration; exit
159	fi
160
161
162	# ### is this really required?
163	config_file=$PWD/$config_file
164
165
166	# READ VARIABLE SETTINGS FROM CONFIG FILE LINE BY LINE
167	while read line
168	do
169
170	# FIRST REPLACE ENVIRONMENT-VARIABLES BY THEIR RESPECTIVE VALUES
171	eval line=\"$line\"
172
173
174	# INTERPRET THE LINE
175	if [[ "$(echo $line)" = "" ]]
176	then
177
178	# EMPTY LINE, NO ACTION
179	continue
180
181	elif [[ "$(echo $line \| cut -c1)" = "#" ]]
182	then
183
184	# LINE IS A COMMENT LINE
185	continue
186
187	elif [[ "$(echo $line \| cut -c1)" = "%" ]]
188	then
189
190	# LINE DEFINES AN ENVIRONMENT-VARIABLE
191	var=`echo $line \| cut -d" " -s -f1 \| cut -c2-`
192	value=`echo $line \| cut -d" " -s -f2-`
193
194	# REPLACE ":" BY " " IN COMPILER- CPP- OR LINKER-OPTIONS,
195	# "::" IS REPLACED BY ":".
196	#value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
197
198
199	# VALUE FROM THE CONFIGURATION-FILE IS ASSIGNED TO THE
200	# ENVIRONMENT-VARIABLE, BUT ONLY IF NO VALUE HAS BEEN ALREADY
201	# ASSIGNED WITHIN THIS SCRIPT (E.G. BY SCRIPT-OPTIONS).
202	# NON-ASSIGNED VARIABLES HAVE VALUE "" OR 0 (IN CASE OF INTEGER).
203	# HENCE THE GENERAL RULE IS: SCRIPT-OPTION OVERWRITES THE
204	# CONFIGURATION-FILE.
205	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
206	then
207	eval export $var="\$value"
208
209	# TERMINAL OUTPUT OF ENVIRONMENT-VARIABLES, IF TRACEBACK IS SWITCHED on
210	if [[ $do_trace = true ]]
211	then
212	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
213	fi
214	fi
215
216	else
217
218	# SKIP ALL OTHER LINES
219	continue
220
221	fi
222
223	done < $config_file
224
225
226	# CHECK, IF THE BASE DIRECTORY PATH HAS BEEN GIVEN
227	if [[ "$base_directory" = "" ]]
228	then
229	printf "\n +++ no base directory found in configuration file"
230	locat=config_file; exit
231	else
232	if [[ ! -d $base_directory ]]
233	then
234	printf "\n\n +++ base directory \"$base_directory\" "
235	printf "\n does not exist"
236	locat=source_path; exit
237	fi
238	fi
239
240
241	# CHECK SOURCE-CODE PATH
242	if [[ "$source_path" = "" ]]
243	then
244	printf "\n +++ no source path found in configuration file"
245	locat=config_file; exit
246	else
247	if [[ ! -d $source_path ]]
248	then
249	printf "\n\n +++ source path \"$source_path\" "
250	printf "\n does not exist"
251	locat=source_path; exit
252	fi
253	fi
254
255
256	# CHECK MAKEFILE
257	makefile=$source_path/Makefile
258	if [[ ! -f $makefile ]]
259	then
260	printf "\n +++ makefile: "
261	printf "\n $makefile"
262	printf "\n does not exist"
263	locat=makefile; exit
264	fi
265
266
267	# CHECK COMPILERNAME
268	if [[ "$compiler_name" = "" ]]
269	then
270	printf "\n +++ no compiler name found in configuration file"
271	locat=config_file; exit
272	fi
273
274
275	# CHECK SERIAL COMPILERNAME
276	if [[ "$compiler_name_ser" = "" ]]
277	then
278	printf "\n +++ no compiler name for serial compilation in configuration file"
279	locat=config_file; exit
280	fi
281
282
283	# DETERMINE SSH-KEY TO BE USED
284	if [[ "$ssh_key" != "" ]]
285	then
286	ssh_key="-i $HOME/.ssh/`echo $line \| cut -d" " -s -f2`"
287	fi
288
289
290	#CHECK CPP-OPTIONS
291	if [[ "$cpp_options" = "" ]]
292	then
293	printf "\n +++ WARNING: no cpp-options found in configuration file"
294	fi
295
296
297	# CHECK SETTINGS IN CASE OF COMPILING ON REMOTE MACHINE
298	if [[ "$remote_ip" != "" ]]
299	then
300
301	if [[ "$remote_username" = "" ]]
302	then
303	printf "\n +++ no user name given in configuration file"
304	locat=config_file; exit
305	fi
306
307	# GET SOURCE AND DEPOSITORY PATH ON THE REMOTE MACHINE WITHOUT EVALUATING
308	# THE $
309	# IF NOT GIVEN, USE THE LOCAL SOURCE AND DEPOSITORY PATH
310	line=`grep %remote_source_path $config_file`
311	if [[ "$line" != "" ]]
312	then
313	remote_source_path=`echo $line \| cut -d" " -s -f2`
314	else
315	line=`grep %source_path $config_file`
316	remote_source_path=`echo $line \| cut -d" " -s -f2`
317	fi
318
319	line=`grep %base_directory $config_file`
320	make_depository=`echo $line \| cut -d" " -s -f2`/MAKE_DEPOSITORY_${configuration_identifier}
321
322	else
323
324	make_depository=${base_directory}/MAKE_DEPOSITORY_${configuration_identifier}
325
326	fi
327
328
329	# GET THE GLOBAL REVISION-NUMBER OF THE SVN-REPOSITORY
330	global_revision=`svnversion $source_path 2>/dev/null`
331	global_revision="Rev: $global_revision"
332
333
334	# HEADER-OUTPUT (PART1: MESSAGES CONCERNING THE LOCAL HOST)
335	if [[ $silent = false ]]
336	then
337	calltime=$(date)
338	printf "\n"
339	printf "#------------------------------------------------------------------------# \n"
340	printf "\| %-40s%30s \| \n" "$version" "$calltime"
341	printf "\| %-40s%30s \| \n" "PALM code $global_revision" " "
342	printf "\| \| \n"
343	printf "\| %-13s%-57s \| \n" "called on:" "$(hostname) (IP:$local_ip)"
344	column2=$(echo $config_file \| cut -c1-57 )
345	printf "\| %-13s%-57s \| \n" "config file:" "$column2"
346	line=$(echo "$config_file" \| cut -c58-)
347	while [[ "$line" != "" ]]
348	do
349	column1=""
350	column2=$(echo $line \| cut -c1-57 )
351	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
352	line=$(echo "$line" \| cut -c58-)
353	done
354	column2=$(echo $makefile \| cut -c1-57 )
355	printf "\| %-13s%-57s \| \n" "makefile:" "$column2"
356	line=$(echo "$makefile" \| cut -c58-)
357	while [[ "$line" != "" ]]
358	do
359	column1=""
360	column2=$(echo $line \| cut -c1-57 )
361	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
362	line=$(echo "$line" \| cut -c58-)
363	done
364	column2=$(echo $source_path \| cut -c1-57 )
365	printf "\| %-13s%-57s \| \n" "source path:" "$column2"
366	line=$(echo "$source_path" \| cut -c58-)
367	while [[ "$line" != "" ]]
368	do
369	column1=""
370	column2=$(echo $line \| cut -c1-57 )
371	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
372	line=$(echo "$line" \| cut -c58-)
373	done
374	printf "\| \| \n"
375
376	if [[ "$remote_ip" != "" ]]
377	then
378	column2="$configuration_identifier"
379	printf "\| %-20s%-50s \| \n" "config. identifier:" "$column2"
380	column2=$(echo "$make_depository" \| cut -c1-50 )
381	printf "\| %-20s%-50s \| \n" "remote depository:" "$column2"
382	else
383	column2="$configuration_identifier"
384	printf "\| %-20s%-50s \| \n" "config. identifier:" "$column2"
385	column2=$(echo "$make_depository" \| cut -c1-50 )
386	printf "\| %-20s%-50s \| \n" "local depository:" "$column2"
387	fi
388	line=$(echo "$make_depository" \| cut -c51-)
389	while [[ "$line" != "" ]]
390	do
391	column1=""
392	column2=$(echo "$line" \| cut -c1-50 )
393	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
394	line=$(echo "$line" \| cut -c51-)
395	done
396
397	if [[ "$remote_ip" != "" ]]
398	then
399	printf "\| %-20s%-50s \| \n" "remote username:" "$remote_username"
400	printf "\| %-20s%-50s \| \n" "remote address:" "$remote_ip"
401	else
402	printf "\| %-20s%-50s \| \n" "username:" "$local_username"
403	printf "\| %-20s%-50s \| \n" "address:" "$local_ip"
404	fi
405
406	printf "\| %-20s%-50s \| \n" "compiler:" "$compiler_name"
407	printf "\| %-20s%-50s \| \n" "serial compiler:" "$compiler_name_ser"
408
409	if [[ "$make_options" != "" ]]
410	then
411	printf "\| %-20s%-50s \| \n" "make options:" "$make_options"
412	fi
413	column2=$(echo "$cpp_options" \| cut -c1-50 )
414	printf "\| %-20s%-50s \| \n" "cpp options:" "$column2"
415	line=$(echo "$cpp_options" \| cut -c51-)
416	while [[ "$line" != "" ]]
417	do
418	column1=""
419	column2=$(echo "$line" \| cut -c1-50 )
420	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
421	line=$(echo "$line" \| cut -c51-)
422	done
423	column2=$(echo "$compiler_options" \| cut -c1-50 )
424	printf "\| %-20s%-50s \| \n" "compiler options:" "$column2"
425	line=$(echo "$compiler_options" \| cut -c51-)
426	while [[ "$line" != "" ]]
427	do
428	column1=""
429	column2=$(echo "$line" \| cut -c1-50 )
430	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
431	line=$(echo "$line" \| cut -c51-)
432	done
433	column2=$(echo "$linker_options" \| cut -c1-50 )
434	printf "\| %-20s%-50s \| \n" "linker options:" "$column2"
435	line=$(echo "$linker_options" \| cut -c51-)
436	while [[ "$line" != "" ]]
437	do
438	column1=""
439	column2=$(echo "$line" \| cut -c1-50 )
440	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
441	line=$(echo "$line" \| cut -c51-)
442	done
443	if [[ "$login_init_cmd" != "" ]]
444	then
445	column2=$(echo "$login_init_cmd" \| cut -c1-50 )
446	printf "\| %-20s%-50s \| \n" "login init command:" "$column2"
447	line=$(echo "$login_init_cmd" \| cut -c51-)
448	while [[ "$line" != "" ]]
449	do
450	column1=""
451	column2=$(echo "$line" \| cut -c1-50 )
452	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
453	line=$(echo "$line" \| cut -c51-)
454	done
455	fi
456	if [[ "$module_commands" != "" ]]
457	then
458	column2=$(echo "$module_commands" \| cut -c1-50 )
459	printf "\| %-20s%-50s \| \n" "module command(s):" "$column2"
460	line=$(echo "$module_commands" \| cut -c51-)
461	while [[ "$line" != "" ]]
462	do
463	column1=""
464	column2=$(echo "$line" \| cut -c1-50 )
465	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
466	line=$(echo "$line" \| cut -c51-)
467	done
468	fi
469	printf "#------------------------------------------------------------------------# \n"
470
471	answer=dummy
472	printf "\n"
473	while [[ "$answer" != y && "$answer" != Y && "$answer" != c && "$answer" != C && "$answer" != s && "$answer" != S && "$answer" != a && "$answer" != A ]]
474	do
475	printf " >>> continue (y(es)/c(ontinue)/a(bort)) ? "
476	read answer
477	done
478	if [[ $answer = a \|\| $answer = A ]]
479	then
480	locat=user_abort; exit
481	fi
482	if [[ $answer = c \|\| $answer = C ]]
483	then
484	silent=true
485	fi
486	fi
487
488
489	# TAR THE SOURCES AND MAKEFILES
490	# UTILITIES ARE TEMPORARILY COPIED TO THE SOURCE DIRECTORY IN ORDER TO TAR
491	# THEM TOO
492	if [[ $silent = false ]]
493	then
494	printf "\n\n *** tar of makefile and source files in"
495	printf "\n $source_path\n"
496	fi
497	cd $source_path
498	cp -p ../UTIL/combine_plot_fields.f90 .
499	cp -p ../UTIL/compare_palm_logs.f90 .
500	cp -p ../UTIL/agent_preprocessing/agent_preprocessing.f90 .
501	cp -p ../UTIL/Makefile_utilities .
502	tar -cf ${program_name}_sources.tar Makefile* *.$suf
503	rm combine_plot_fields.f90 compare_palm_logs.f90 agent_preprocessing.f90 Makefile_utilities
504
505
506	# MAKE ON REMOTE HOST
507	if [[ "$remote_ip" != "" ]]
508	then
509
510	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_...
511	if [[ "$run_identifier" = "" ]]
512	then
513
514	# COPY CURRENT SOURCE CODE TO SOURCE-CODE DIRECTORY ON THE REMOTE HOST
515	# CREATE THIS DIRECTORY, IF IT DOES NOT EXIST
516	if [[ $silent = false ]]
517	then
518	echo " "
519	echo " *** copying \"${program_name}_sources.tar\" to \"${remote_ip}:${make_depository}/\" "
520	echo "[[ ! -d ${make_depository} ]] && (echo \" *** ${make_depository} will be created\"; mkdir -p ${make_depository})" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
521	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar
522	else
523	echo "[[ ! -d ${make_depository} ]] && mkdir -p ${make_depository}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
524	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar > /dev/null
525	fi
526
527
528
529
530	# UNTAR PREVIOUS UPDATE ON REMOTE HOST, IF EXISTING
531	if [[ $silent = false ]]
532	then
533	echo " *** untar previous update on remote host, if existing"
534	fi
535	echo "cd ${make_depository}; [[ -f ${program_name}_current_version.tar ]] && tar -xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
536
537
538	# UNTAR CURRENT SOURCES ON REMOTE HOST
539	if [[ $silent = false ]]
540	then
541	echo " *** untar current sources on remote host"
542	fi
543	echo "cd ${make_depository}; tar -xf ${program_name}_sources.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
544
545
546	# CREATE INIT AND MODULE COAMMNDS
547	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
548	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
549
550
551	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
552	if [[ $silent = false ]]
553	then
554	echo " "
555	echo " *** creating utilities on remote host"
556	fi
557	make_call_string="make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
558	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${configuration_identifier}_last_make_protocol
559
560	if [[ $(grep -c MAKE_ERROR ${configuration_identifier}_last_make_protocol) != 0 ]]
561	then
562	printf "\a\n +++ error(s) occurred during compiling or linking of utilities"
563	printf "\n for host configuration \"$configuration_identifier\" "
564	if [[ $silent = false ]]
565	then
566	answer=dummy
567	printf "\n"
568	while [[ "$answer" != c && "$answer" != k ]]
569	do
570	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
571	read answer
572	if [[ "$answer" = l ]]
573	then
574	more ${configuration_identifier}_last_make_protocol
575	fi
576	done
577	if [[ $answer = k ]]
578	then
579	locat=user_abort; exit
580	fi
581	else
582	# ABORT ANYWAY
583	locat=user_abort; exit
584	fi
585	fi
586
587	# NOW COMPILE THE PALM CODE
588	# COMMANDS WILL BE COMMUNICATED TO SSH VIA PIPE, SINCE THIS WAY THE SYSTEM- AND
589	# USER-PROFILES OF THE SHELL ARE COMPLETELY EXECUTED (OTHERWISE, MAKE
590	# MAY E.G. MISS THE COMPILER-PATHS)
591	if [[ $silent = false ]]
592	then
593	echo " "
594	echo " *** compile PALM sources on remote host"
595	fi
596	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
597	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${configuration_identifier}_last_make_protocol
598
599	if [[ $(grep -c MAKE_ERROR ${configuration_identifier}_last_make_protocol) != 0 ]]
600	then
601	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$configuration_identifier\" "
602	if [[ $silent = false ]]
603	then
604	answer=dummy
605	printf "\n"
606	while [[ "$answer" != c && "$answer" != k ]]
607	do
608	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
609	read answer
610	if [[ "$answer" = l ]]
611	then
612	more ${configuration_identifier}_last_make_protocol
613	fi
614	done
615	if [[ $answer = k ]]
616	then
617	locat=user_abort; exit
618	fi
619	else
620	# ABORT ANYWAY
621	locat=user_abort; exit
622	fi
623	fi
624
625	# TAR UPDATED VERSION ON THE REMOTE HOST
626	if [[ $silent = false ]]
627	then
628	printf "\n *** tar update on remote host ..."
629	fi
630	echo "cd ${make_depository}; chmod u+w ; tar -cf ${program_name}_current_version.tar ${program_name} .f90 .o .mod *.x" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
631
632
633	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
634	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
635	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
636	elif [[ "$run_identifier" != "" ]]
637	then
638
639	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
640	# AND ASK, IF THEY SHALL BE USED
641	echo "[[ -d ${fast_io_catalog}/${sources_for_run_catalog} ]] && echo sources for run found" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 > ${configuration_identifier}_last_make_protocol
642	if [[ $(grep -c "sources for run found" ${configuration_identifier}_last_make_protocol) != 0 && $use_existing_sources_folder = true ]]
643	then
644	printf "\a\n *** compiled sources for run \"$run_identifier\" found on remote host in folder"
645	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
646	printf "\n will be used!"
647	exit
648	fi
649
650	# COPY MAKE DEPOSITORY ON REMOTE MACHINE TO SOURCES_FOR_RUN_...
651	if [[ $silent = false ]]
652	then
653	printf "\n *** copy MAKE_DEPOSITORY_${configuration_identifier} on remote host to $sources_for_run_catalog \n"
654	fi
655	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}; mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}; cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}; cd ${fast_io_catalog}/${sources_for_run_catalog}; tar xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
656
657
658	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_... ON THE REMOTE MACHINE
659	if [[ $silent = false ]]
660	then
661	printf "\n *** copy ${base_directory}/${sources_for_run_catalog}"
662	printf "\n to $sources_for_run_catalog on remote host \n"
663	fi
664	scp -q $ssh_key ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${remote_username}@${remote_ip}:${fast_io_catalog}/${sources_for_run_catalog}
665
666
667	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
668	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
669	then
670
671	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
672	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
673	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
674	if [[ $silent = false ]]
675	then
676	echo " *** execute \"make\" on remote host"
677	fi
678	echo "$login_init_cmd $module_commands cd ${fast_io_catalog}/${sources_for_run_catalog}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${configuration_identifier}_last_make_protocol
679
680	if [[ $(grep -c MAKE_ERROR ${configuration_identifier}_last_make_protocol) != 0 ]]
681	then
682	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$configuration_identifier\" "
683	if [[ $silent = false ]]
684	then
685	answer=dummy
686	printf "\n"
687	while [[ "$answer" != c && "$answer" != k ]]
688	do
689	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
690	read answer
691	if [[ "$answer" = l ]]
692	then
693	more ${configuration_identifier}_last_make_protocol
694	fi
695	done
696	if [[ $answer = k ]]
697	then
698	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
699	locat=user_abort; exit
700	fi
701	else
702	# ABORT ANYWAY
703	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
704	locat=user_abort; exit
705	fi
706	fi
707
708	else
709
710	echo " *** nothing to compile for this run"
711
712	fi
713
714	fi
715
716	rm -rf ${source_path}/${configuration_identifier}_last_make_protocol
717
718
719	# MAKE ON LOCAL HOST
720	else
721
722
723	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_... ON THE
724	# LOCAL HOST
725	if [[ "$run_identifier" = "" ]]
726	then
727
728	# SET THE ENVIRONMENT (EXECUTE INIT AND MODULE COMMANDS)
729	if [[ "$login_init_cmd" != "" ]]
730	then
731	$login_init_cmd
732	fi
733
734	if [[ "$module_commands" != "" ]]
735	then
736	$module_commands
737	fi
738
739
740	# CREATE MAKE-DEPOSITORY, IF IT DOES NOT EXIST
741	eval make_depository=$make_depository
742	if [[ ! -d $make_depository ]]
743	then
744	if mkdir -p $make_depository
745	then
746	if [[ $silent = false ]]
747	then
748	printf "\n\n *** directory for local make depository:"
749	printf "\n $make_depository"
750	printf "\n was created\n"
751	fi
752	else
753	printf "\n +++ directory for local make depository:"
754	printf "\n $make_depository"
755	printf "\n cannot be created"
756	locat=local_depository; exit
757	fi
758	fi
759
760	# COPY SOURCE-CODE FROM REPOSITORY TO MAKE-DEPOSITORY
761	if [[ $silent = false ]]
762	then
763	echo " "
764	echo " *** untar current source sources on local host in"
765	echo " $make_depository"
766	fi
767	cd $make_depository
768	cp $source_path/${program_name}_sources.tar .
769	tar xf ${program_name}_sources.tar
770
771
772	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
773	if [[ $silent = false ]]
774	then
775	echo " "
776	echo " *** creating utilities on local host"
777	fi
778	make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options" \| tee ${configuration_identifier}_last_make_protocol
779
780	if [[ ${PIPESTATUS[0]} != 0 ]]
781	then
782	printf "\a\n +++ error(s) occurred during compiling of the utilities for host configuration \"$configuration_identifier\" "
783	if [[ $silent = false ]]
784	then
785	answer=dummy
786	printf "\n"
787	while [[ "$answer" != c && "$answer" != k ]]
788	do
789	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
790	read answer
791	if [[ "$answer" = l ]]
792	then
793	more ${configuration_identifier}_last_make_protocol
794	fi
795	done
796	if [[ $answer = k ]]
797	then
798	locat=user_abort; exit
799	fi
800	else
801	# ABORT ANYWAY
802	locat=user_abort; exit
803	fi
804	else
805	cp agent_preprocessing $source_path/../SCRIPTS/.
806	fi
807
808
809	# CALL MAKE ON LOCAL HOST USING THE OPTIONS DETERMINED FURTHER ABOVE
810	if [[ $silent = false ]]
811	then
812	echo " "
813	echo " *** compile PALM sources on local host"
814	fi
815
816	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options" 2>&1 \| tee ${configuration_identifier}_last_make_protocol
817
818	if [[ ${PIPESTATUS[0]} != 0 ]]
819	then
820	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$configuration_identifier\" "
821	if [[ $silent = false ]]
822	then
823	answer=dummy
824	printf "\n"
825	while [[ "$answer" != c && "$answer" != k ]]
826	do
827	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
828	read answer
829	if [[ "$answer" = l ]]
830	then
831	more ${configuration_identifier}_last_make_protocol
832	fi
833	done
834	if [[ $answer = k ]]
835	then
836	locat=user_abort; exit
837	fi
838	else
839	# ABORT ANYWAY
840	locat=user_abort; exit
841	fi
842	fi
843
844
845	# TAR NEW VERSION ON LOCAL HOST
846	if [[ $silent = false ]]
847	then
848	printf "\n *** tar update on local host ..."
849	fi
850	tar -cf ${program_name}_current_version.tar ${program_name} .$suf .o .mod .x
851
852	else
853
854	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
855	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
856	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
857
858	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
859	# AND ASK, IF THEY SHALL BE USED
860	if [[ -d ${fast_io_catalog}/${sources_for_run_catalog} && $use_existing_sources_folder = true ]]
861	then
862	printf "\a\n *** compiled sources for run \"$run_identifier\" found on local host in folder"
863	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
864	printf "\n will be used!"
865	exit
866	fi
867
868	# SECOND CHECK, IF A DEPOSITORY EXISTS ON THE LOCAL MACHINE
869	if [[ ! -d ${make_depository} ]]
870	then
871	printf "\n +++ directory for local make depository:"
872	printf "\n $make_depository"
873	printf "\n not found. Please run \"palmbuild -h $configuration_identifier\" "
874	locat=make_depository; exit
875	fi
876
877
878	# COPY MAKE DEPOSITORY ON LOCAL MACHINE TO SOURCES_FOR_RUN_...
879	if [[ $silent = false ]]
880	then
881	printf "\n *** copy MAKE_DEPOSITORY_${configuration_identifier} on local host to "
882	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} \n"
883	fi
884	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
885	mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}
886	cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}
887	cd $fast_io_catalog/${sources_for_run_catalog}
888	tar xf ${program_name}_current_version.tar
889
890
891	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_...
892	# IN THE FAST_IO_CATALOG ON THE LOCAL MACHINE
893	if [[ $silent = false ]]
894	then
895	printf "\n *** copy ${base_directory}/${sources_for_run_catalog} to"
896	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} on local host \n"
897	fi
898	cp ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${fast_io_catalog}/${sources_for_run_catalog}
899
900
901	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
902	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
903	then
904
905	if [[ $silent = false ]]
906	then
907	echo " *** execute \"make\" on local host"
908	fi
909	[[ "$login_init_cmd" != "" ]] && $login_init_cmd
910	[[ "$module_commands" != "" ]] && $module_commands
911
912	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
913
914	if [[ ${PIPESTATUS[0]} != 0 ]]
915	then
916
917	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$configuration_identifier\" "
918	if [[ $silent = false ]]
919	then
920	answer=dummy
921	printf "\n"
922	while [[ "$answer" != c && "$answer" != k ]]
923	do
924	printf " >>> continue / kill palmbuild (c/k) ? "
925	read answer
926	done
927	if [[ $answer = k ]]
928	then
929	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
930	locat=user_abort; exit
931	fi
932	else
933	# ABORT ANYWAY
934	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
935	locat=user_abort; exit
936	fi
937	fi
938
939	else
940
941	echo " *** nothing to compile for this run"
942
943	fi
944
945	fi
946	fi

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