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source: palm/trunk/SCRIPTS/palmbuild @ 3209

Last change on this file since 3209 was 3208, checked in by sward, 6 years ago
Renamed nav_mesh to agent_preprocessing and added it to palmbuild
Property svn:executable set to ``* Property svn:keywords set to `Id Rev`
File size: 31.2 KB

Line
1	#!/bin/bash
2
3	# palmbuild - script for compiling the PALM code and its utility programs
4
5	#------------------------------------------------------------------------------#
6	# This file is part of the PALM model system.
7	#
8	# PALM is free software: you can redistribute it and/or modify it under the terms
9	# of the GNU General Public License as published by the Free Software Foundation,
10	# either version 3 of the License, or (at your option) any later version.
11	#
12	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
13	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
14	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
15	#
16	# You should have received a copy of the GNU General Public License along with
17	# PALM. If not, see <http://www.gnu.org/licenses/>.
18	#
19	# Copyright 2017-2018 Leibniz Universitaet Hannover
20	#------------------------------------------------------------------------------#
21	#
22	# Current revisions:
23	# ------------------
24	#
25	#
26	# Former revisions:
27	# -----------------
28	# $Id: palmbuild 3208 2018-08-27 13:10:50Z suehring $
29	# Added building of agent_preprocessing
30	#
31	# 3033 2018-05-23 15:26:19Z raasch
32	# "fname" renamed to "jobname"
33	#
34	# 2718 2018-01-02 08:49:38Z maronga
35	# Corrected "Former revisions" section
36	#
37	# 2696 2017-12-14 17:12:51Z kanani
38	# Change in file header (GPL part)
39	#
40	# 2566 2017-10-20 08:50:47Z raasch
41	# informative messages switched of almost completely in silent mode
42	# two header blocks merged into one
43	#
44	# 2506 2017-09-29 08:30:37Z raasch
45	# option -V added to check for an existing SOURCES_FOR_RUN_... folder
46	# host configuration added to SOURCES_FOR_RUN_... folder name
47	# SOURCES_FOR_RUN_... folder is deleted in case of compilation errors
48	# host_identifier renamed host_configuration
49	#
50	# 2500 2017-09-25 11:10:03Z raasch
51	# bugfix for r2492
52	#
53	# 2492 2017-09-21 14:18:48Z raasch
54	# ask for compilation, if SOURCES_FOR_RUN_... exists
55	#
56	# 2487 2017-09-21 11:30:10Z raasch
57	# bugfix: abort in case of compiling/linking errors in silent mode
58	#
59	# 2422 2017-09-08 08:25:41Z raasch
60	# initial revision
61	#
62	#------------------------------------------------------------------------------#
63	# palmbuild - script for compiling the PALM code and its utility programs
64	#
65	# Procedure to compile code on local and remote hosts using the
66	# make-mechanism. The source code must be provided on the local host.
67	#
68	# @note This script does not work on MAC OS
69	#------------------------------------------------------------------------------#
70
71
72	# VARIABLE DECLARATIONS + DEFAULT VALUES
73	calltime=""
74	column1=""
75	column2=""
76	host_configuration=default
77	locat=normal
78	makefile=""
79	make_options=""
80	module_commands=""
81	program_name=palm
82	remote_ip=""
83	silent=false
84	ssh_key=""
85	suf=f90
86	use_existing_sources_folder=false
87	version="palmbuild 1.0 Rev$Rev: 3208 $"
88	working_directory=`pwd`
89
90
91
92	# ERROR HANDLING
93	# IN CASE OF EXIT:
94	trap 'rm -rf ${source_path}/${host_configuration}_last_make_protocol
95	if [[ $locat != normal ]]
96	then
97	printf "\n\n +++ palmbuild killed \n\n"
98	exit 1
99	else
100	if [[ $silent = false ]]
101	then
102	printf "\n\n *** palmbuild finished \n\n"
103	fi
104	exit 0
105	fi
106	' exit
107
108
109	# IN CASE OF TERMINAL-BREAK:
110	trap 'printf "\n\n +++ palmbuild killed by \"^C\" \n\n"
111	rm ${source_path}/${host_configuration}_last_make_protocol
112	exit
113	' 2
114
115
116
117	# READ SHELLSCRIPT-OPTIONS
118	while getopts :d:h:m:s:S:uvV option
119	do
120	case $option in
121	(d) jobname=$OPTARG;;
122	(h) host_configuration=$OPTARG;;
123	(m) makefile=$OPTARG;;
124	(s) suf=$OPTARG;;
125	(S) source_list="$OPTARG";;
126	(v) silent=true;;
127	(V) use_existing_sources_folder=true;;
128	(\?) printf "\n +++ unknown option $OPTARG \n";
129	locat=parameter; exit;;
130	esac
131	done
132
133
134	# FOR COMPATIBILITY REASONS SET OLD ENVIRONMENT VARIABLE
135	export fname=$jobname
136
137
138	# BUILD THE CONFIGURATION-FILE NAME AND THE SOURCES_FOR_RUN-FOLDER NAME
139	config_file=.palm.config.$host_configuration
140	sources_for_run_catalog=SOURCES_FOR_RUN_${host_configuration}_$jobname
141
142
143	# CHECK, IF CONFIGURATION-FILE EXISTS
144	if [[ ! -f $config_file ]]
145	then
146	printf "\n +++ configuration file: "
147	printf "\n $config_file"
148	printf "\n does not exist"
149	locat=configuration; exit
150	fi
151
152
153	# ### is this really required?
154	config_file=$PWD/$config_file
155
156
157	# READ VARIABLE SETTINGS FROM CONFIG FILE LINE BY LINE
158	while read line
159	do
160
161	# FIRST REPLACE ENVIRONMENT-VARIABLES BY THEIR RESPECTIVE VALUES
162	eval line=\"$line\"
163
164
165	# INTERPRET THE LINE
166	if [[ "$(echo $line)" = "" ]]
167	then
168
169	# EMPTY LINE, NO ACTION
170	continue
171
172	elif [[ "$(echo $line \| cut -c1)" = "#" ]]
173	then
174
175	# LINE IS A COMMENT LINE
176	continue
177
178	elif [[ "$(echo $line \| cut -c1)" = "%" ]]
179	then
180
181	# LINE DEFINES AN ENVIRONMENT-VARIABLE
182	var=`echo $line \| cut -d" " -s -f1 \| cut -c2-`
183	value=`echo $line \| cut -d" " -s -f2-`
184
185	# REPLACE ":" BY " " IN COMPILER- CPP- OR LINKER-OPTIONS,
186	# "::" IS REPLACED BY ":".
187	#value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
188
189
190	# VALUE FROM THE CONFIGURATION-FILE IS ASSIGNED TO THE
191	# ENVIRONMENT-VARIABLE, BUT ONLY IF NO VALUE HAS BEEN ALREADY
192	# ASSIGNED WITHIN THIS SCRIPT (E.G. BY SCRIPT-OPTIONS).
193	# NON-ASSIGNED VARIABLES HAVE VALUE "" OR 0 (IN CASE OF INTEGER).
194	# HENCE THE GENERAL RULE IS: SCRIPT-OPTION OVERWRITES THE
195	# CONFIGURATION-FILE.
196	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
197	then
198	eval export $var="\$value"
199
200	# TERMINAL OUTPUT OF ENVIRONMENT-VARIABLES, IF TRACEBACK IS SWITCHED on
201	if [[ $do_trace = true ]]
202	then
203	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
204	fi
205	fi
206
207	else
208
209	# SKIP ALL OTHER LINES
210	continue
211
212	fi
213
214	done < $config_file
215
216
217	# CHECK, IF THE BASE DIRECTORY PATH HAS BEEN GIVEN
218	if [[ "$base_directory" = "" ]]
219	then
220	printf "\n +++ no base directory found in configuration file"
221	locat=config_file; exit
222	else
223	if [[ ! -d $base_directory ]]
224	then
225	printf "\n\n +++ base directory \"$base_directory\" "
226	printf "\n does not exist"
227	locat=source_path; exit
228	fi
229	fi
230
231
232	# CHECK SOURCE-CODE PATH
233	if [[ "$source_path" = "" ]]
234	then
235	printf "\n +++ no source path found in configuration file"
236	locat=config_file; exit
237	else
238	if [[ ! -d $source_path ]]
239	then
240	printf "\n\n +++ source path \"$source_path\" "
241	printf "\n does not exist"
242	locat=source_path; exit
243	fi
244	fi
245
246
247	# CHECK MAKEFILE
248	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
249	if [[ ! -f $makefile ]]
250	then
251	printf "\n +++ makefile: "
252	printf "\n $makefile"
253	printf "\n does not exist"
254	locat=makefile; exit
255	fi
256
257
258	# CHECK COMPILERNAME
259	if [[ "$compiler_name" = "" ]]
260	then
261	printf "\n +++ no compiler name found in configuration file"
262	locat=config_file; exit
263	fi
264
265
266	# CHECK SERIAL COMPILERNAME
267	if [[ "$compiler_name_ser" = "" ]]
268	then
269	printf "\n +++ no compiler name for serial compilation in configuration file"
270	locat=config_file; exit
271	fi
272
273
274	# DETERMINE SSH-KEY TO BE USED
275	if [[ "$ssh_key" != "" ]]
276	then
277	ssh_key="-i $HOME/.ssh/`echo $line \| cut -d" " -s -f2`"
278	fi
279
280
281	#CHECK CPP-OPTIONS
282	if [[ "$cpp_options" = "" ]]
283	then
284	printf "\n +++ WARNING: no cpp-options found in configuration file"
285	fi
286
287
288	# CHECK SETTINGS IN CASE OF COMPILING ON REMOTE MACHINE
289	if [[ "$remote_ip" != "" ]]
290	then
291
292	if [[ "$remote_username" = "" ]]
293	then
294	printf "\n +++ no user name given in configuration file"
295	locat=config_file; exit
296	fi
297
298	# GET SOURCE AND DEPOSITORY PATH ON THE REMOTE MACHINE WITHOUT EVALUATING
299	# THE $
300	# IF NOT GIVEN, USE THE LOCAL SOURCE AND DEPOSITORY PATH
301	line=`grep %remote_source_path $config_file`
302	if [[ "$line" != "" ]]
303	then
304	remote_source_path=`echo $line \| cut -d" " -s -f2`
305	else
306	line=`grep %source_path $config_file`
307	remote_source_path=`echo $line \| cut -d" " -s -f2`
308	fi
309
310	line=`grep %base_directory $config_file`
311	make_depository=`echo $line \| cut -d" " -s -f2`/MAKE_DEPOSITORY_${host_configuration}
312
313	else
314
315	make_depository=${base_directory}/MAKE_DEPOSITORY_${host_configuration}
316
317	fi
318
319	# HEADER-OUTPUT (PART1: MESSAGES CONCERNING THE LOCAL HOST)
320	if [[ $silent = false ]]
321	then
322	calltime=$(date)
323	printf "\n"
324	printf "#------------------------------------------------------------------------# \n"
325	printf "\| %-40s%30s \| \n" "$version" "$calltime"
326	printf "\| \| \n"
327	printf "\| %-13s%-57s \| \n" "called on:" "$(hostname) (IP:$local_ip)"
328	column2=$(echo $config_file \| cut -c1-57 )
329	printf "\| %-13s%-57s \| \n" "config file:" "$column2"
330	line=$(echo "$config_file" \| cut -c58-)
331	while [[ "$line" != "" ]]
332	do
333	column1=""
334	column2=$(echo $line \| cut -c1-57 )
335	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
336	line=$(echo "$line" \| cut -c58-)
337	done
338	column2=$(echo $makefile \| cut -c1-57 )
339	printf "\| %-13s%-57s \| \n" "makefile:" "$column2"
340	line=$(echo "$makefile" \| cut -c58-)
341	while [[ "$line" != "" ]]
342	do
343	column1=""
344	column2=$(echo $line \| cut -c1-57 )
345	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
346	line=$(echo "$line" \| cut -c58-)
347	done
348	column2=$(echo $source_path \| cut -c1-57 )
349	printf "\| %-13s%-57s \| \n" "source path:" "$column2"
350	line=$(echo "$source_path" \| cut -c58-)
351	while [[ "$line" != "" ]]
352	do
353	column1=""
354	column2=$(echo $line \| cut -c1-57 )
355	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
356	line=$(echo "$line" \| cut -c58-)
357	done
358	printf "\| \| \n"
359
360	if [[ "$remote_ip" != "" ]]
361	then
362	column2="$host_configuration"
363	printf "\| %-20s%-50s \| \n" "host configuration:" "$column2"
364	column2=$(echo "$make_depository" \| cut -c1-50 )
365	printf "\| %-20s%-50s \| \n" "remote depository:" "$column2"
366	else
367	column2="$host_configuration"
368	printf "\| %-20s%-50s \| \n" "host identifier:" "$column2"
369	column2=$(echo "$make_depository" \| cut -c1-50 )
370	printf "\| %-20s%-50s \| \n" "local depository:" "$column2"
371	fi
372	line=$(echo "$make_depository" \| cut -c51-)
373	while [[ "$line" != "" ]]
374	do
375	column1=""
376	column2=$(echo "$line" \| cut -c1-50 )
377	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
378	line=$(echo "$line" \| cut -c51-)
379	done
380
381	if [[ "$remote_ip" != "" ]]
382	then
383	printf "\| %-20s%-50s \| \n" "remote username:" "$remote_username"
384	printf "\| %-20s%-50s \| \n" "remote address:" "$remote_ip"
385	else
386	printf "\| %-20s%-50s \| \n" "username:" "$local_username"
387	printf "\| %-20s%-50s \| \n" "address:" "$local_ip"
388	fi
389
390	printf "\| %-20s%-50s \| \n" "compiler:" "$compiler_name"
391	printf "\| %-20s%-50s \| \n" "serial compiler:" "$compiler_name_ser"
392
393	if [[ "$make_options" != "" ]]
394	then
395	printf "\| %-20s%-50s \| \n" "make options:" "$make_options"
396	fi
397	column2=$(echo "$cpp_options" \| cut -c1-50 )
398	printf "\| %-20s%-50s \| \n" "cpp options:" "$column2"
399	line=$(echo "$cpp_options" \| cut -c51-)
400	while [[ "$line" != "" ]]
401	do
402	column1=""
403	column2=$(echo "$line" \| cut -c1-50 )
404	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
405	line=$(echo "$line" \| cut -c51-)
406	done
407	column2=$(echo "$compiler_options" \| cut -c1-50 )
408	printf "\| %-20s%-50s \| \n" "compiler options:" "$column2"
409	line=$(echo "$compiler_options" \| cut -c51-)
410	while [[ "$line" != "" ]]
411	do
412	column1=""
413	column2=$(echo "$line" \| cut -c1-50 )
414	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
415	line=$(echo "$line" \| cut -c51-)
416	done
417	column2=$(echo "$linker_options" \| cut -c1-50 )
418	printf "\| %-20s%-50s \| \n" "linker options:" "$column2"
419	line=$(echo "$linker_options" \| cut -c51-)
420	while [[ "$line" != "" ]]
421	do
422	column1=""
423	column2=$(echo "$line" \| cut -c1-50 )
424	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
425	line=$(echo "$line" \| cut -c51-)
426	done
427	if [[ "$login_init_cmd" != "" ]]
428	then
429	column2=$(echo "$login_init_cmd" \| cut -c1-50 )
430	printf "\| %-20s%-50s \| \n" "login init command:" "$column2"
431	line=$(echo "$login_init_cmd" \| cut -c51-)
432	while [[ "$line" != "" ]]
433	do
434	column1=""
435	column2=$(echo "$line" \| cut -c1-50 )
436	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
437	line=$(echo "$line" \| cut -c51-)
438	done
439	fi
440	if [[ "$module_commands" != "" ]]
441	then
442	column2=$(echo "$module_commands" \| cut -c1-50 )
443	printf "\| %-20s%-50s \| \n" "module command(s):" "$column2"
444	line=$(echo "$module_commands" \| cut -c51-)
445	while [[ "$line" != "" ]]
446	do
447	column1=""
448	column2=$(echo "$line" \| cut -c1-50 )
449	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
450	line=$(echo "$line" \| cut -c51-)
451	done
452	fi
453	printf "#------------------------------------------------------------------------# \n"
454
455	answer=dummy
456	printf "\n"
457	while [[ "$answer" != y && "$answer" != Y && "$answer" != c && "$answer" != C && "$answer" != s && "$answer" != S && "$answer" != a && "$answer" != A ]]
458	do
459	printf " >>> continue (y(es)/c(ontinue)/a(bort)) ? "
460	read answer
461	done
462	if [[ $answer = a \|\| $answer = A ]]
463	then
464	locat=user_abort; exit
465	fi
466	if [[ $answer = c \|\| $answer = C ]]
467	then
468	silent=true
469	fi
470	fi
471
472
473	# TAR THE SOURCES AND MAKEFILES
474	# UTILITIES ARE TEMPORARILY COPIED TO THE SOURCE DIRECTORY IN ORDER TO TAR
475	# THEM TOO
476	if [[ $silent = false ]]
477	then
478	printf "\n\n *** tar of makefile and source files in"
479	printf "\n $source_path\n"
480	fi
481	cd $source_path
482	cp -p ../UTIL/combine_plot_fields.f90 .
483	cp -p ../UTIL/compare_palm_logs.f90 .
484	cp -p ../UTIL/agent_preprocessing/agent_preprocessing.f90 .
485	cp -p ../UTIL/Makefile_utilities .
486	tar -cf ${program_name}_sources.tar Makefile* *.$suf
487	rm combine_plot_fields.f90 compare_palm_logs.f90 agent_preprocessing.f90 Makefile_utilities
488
489
490	# MAKE ON REMOTE HOST
491	if [[ "$remote_ip" != "" ]]
492	then
493
494	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_...
495	if [[ "$jobname" = "" ]]
496	then
497
498	# COPY CURRENT SOURCE CODE TO SOURCE-CODE DIRECTORY ON THE REMOTE HOST
499	# CREATE THIS DIRECTORY, IF IT DOES NOT EXIST
500	if [[ $silent = false ]]
501	then
502	echo " "
503	echo " *** copying \"${program_name}_sources.tar\" to \"${remote_ip}:${make_depository}/\" "
504	echo "[[ ! -d ${make_depository} ]] && (echo \" *** ${make_depository} will be created\"; mkdir -p ${make_depository})" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
505	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar
506	else
507	echo "[[ ! -d ${make_depository} ]] && mkdir -p ${make_depository}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
508	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar > /dev/null
509	fi
510
511
512
513
514	# UNTAR PREVIOUS UPDATE ON REMOTE HOST, IF EXISTING
515	if [[ $silent = false ]]
516	then
517	echo " *** untar previous update on remote host, if existing"
518	fi
519	echo "cd ${make_depository}; [[ -f ${program_name}_current_version.tar ]] && tar -xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
520
521
522	# UNTAR CURRENT SOURCES ON REMOTE HOST
523	if [[ $silent = false ]]
524	then
525	echo " *** untar current sources on remote host"
526	fi
527	echo "cd ${make_depository}; tar -xf ${program_name}_sources.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
528
529
530	# CREATE INIT AND MODULE COAMMNDS
531	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
532	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
533
534
535	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
536	if [[ $silent = false ]]
537	then
538	echo " "
539	echo " *** creating utilities on remote host"
540	fi
541	make_call_string="make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
542	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
543
544	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
545	then
546	printf "\a\n +++ error(s) occurred during compiling or linking of utilities"
547	printf "\n for host configuration \"$host_configuration\" "
548	if [[ $silent = false ]]
549	then
550	answer=dummy
551	printf "\n"
552	while [[ "$answer" != c && "$answer" != k ]]
553	do
554	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
555	read answer
556	if [[ "$answer" = l ]]
557	then
558	more ${host_configuration}_last_make_protocol
559	fi
560	done
561	if [[ $answer = k ]]
562	then
563	locat=user_abort; exit
564	fi
565	else
566	# ABORT ANYWAY
567	locat=user_abort; exit
568	fi
569	fi
570	mv agent_preprocessing $source_path/../SCRIPTS/.
571
572
573	# NOW COMPILE THE PALM CODE
574	# COMMANDS WILL BE COMMUNICATED TO SSH VIA PIPE, SINCE THIS WAY THE SYSTEM- AND
575	# USER-PROFILES OF THE SHELL ARE COMPLETELY EXECUTED (OTHERWISE, MAKE
576	# MAY E.G. MISS THE COMPILER-PATHS)
577	if [[ $silent = false ]]
578	then
579	echo " "
580	echo " *** compile PALM sources on remote host"
581	fi
582	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
583	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
584
585	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
586	then
587	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
588	if [[ $silent = false ]]
589	then
590	answer=dummy
591	printf "\n"
592	while [[ "$answer" != c && "$answer" != k ]]
593	do
594	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
595	read answer
596	if [[ "$answer" = l ]]
597	then
598	more ${host_configuration}_last_make_protocol
599	fi
600	done
601	if [[ $answer = k ]]
602	then
603	locat=user_abort; exit
604	fi
605	else
606	# ABORT ANYWAY
607	locat=user_abort; exit
608	fi
609	fi
610
611	# TAR UPDATED VERSION ON THE REMOTE HOST
612	if [[ $silent = false ]]
613	then
614	printf "\n *** tar update on remote host ..."
615	fi
616	echo "cd ${make_depository}; chmod u+w ; tar -cf ${program_name}_current_version.tar ${program_name} .f90 .o .mod *.x" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
617
618
619	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
620	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
621	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
622	elif [[ "$jobname" != "" ]]
623	then
624
625	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
626	# AND ASK, IF THEY SHALL BE USED
627	echo "[[ -d ${fast_io_catalog}/${sources_for_run_catalog} ]] && echo sources for run found" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 > ${host_configuration}_last_make_protocol
628	if [[ $(grep -c "sources for run found" ${host_configuration}_last_make_protocol) != 0 && $use_existing_sources_folder = true ]]
629	then
630	printf "\a\n *** compiled sources for run \"$jobname\" found on remote host in folder"
631	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
632	printf "\n will be used!"
633	exit
634	fi
635
636	# COPY MAKE DEPOSITORY ON REMOTE MACHINE TO SOURCES_FOR_RUN_...
637	if [[ $silent = false ]]
638	then
639	printf "\n *** copy MAKE_DEPOSITORY_${host_configuration} on remote host to $sources_for_run_catalog \n"
640	fi
641	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}; mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}; cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}; cd ${fast_io_catalog}/${sources_for_run_catalog}; tar xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
642
643
644	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_... ON THE REMOTE MACHINE
645	if [[ $silent = false ]]
646	then
647	printf "\n *** copy ${base_directory}/${sources_for_run_catalog}"
648	printf "\n to $sources_for_run_catalog on remote host \n"
649	fi
650	scp -q $ssh_key ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${remote_username}@${remote_ip}:${fast_io_catalog}/${sources_for_run_catalog}
651
652
653	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
654	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
655	then
656
657	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
658	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
659	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
660	if [[ $silent = false ]]
661	then
662	echo " *** execute \"make\" on remote host"
663	fi
664	echo "$login_init_cmd $module_commands cd ${fast_io_catalog}/${sources_for_run_catalog}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
665
666	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
667	then
668	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
669	if [[ $silent = false ]]
670	then
671	answer=dummy
672	printf "\n"
673	while [[ "$answer" != c && "$answer" != k ]]
674	do
675	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
676	read answer
677	if [[ "$answer" = l ]]
678	then
679	more ${host_configuration}_last_make_protocol
680	fi
681	done
682	if [[ $answer = k ]]
683	then
684	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
685	locat=user_abort; exit
686	fi
687	else
688	# ABORT ANYWAY
689	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
690	locat=user_abort; exit
691	fi
692	fi
693
694	else
695
696	echo " *** nothing to compile for this run"
697
698	fi
699
700	fi
701
702	rm -rf ${source_path}/${host_configuration}_last_make_protocol
703
704
705	# MAKE ON LOCAL HOST
706	else
707
708
709	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_... ON THE
710	# LOCAL HOST
711	if [[ "$jobname" = "" ]]
712	then
713
714	# SET THE ENVIRONMENT (EXECUTE INIT AND MODULE COMMANDS)
715	if [[ "$login_init_cmd" != "" ]]
716	then
717	$login_init_cmd
718	fi
719
720	if [[ "$module_commands" != "" ]]
721	then
722	$module_commands
723	fi
724
725
726	# CREATE MAKE-DEPOSITORY, IF IT DOES NOT EXIST
727	eval make_depository=$make_depository
728	if [[ ! -d $make_depository ]]
729	then
730	if mkdir -p $make_depository
731	then
732	if [[ $silent = false ]]
733	then
734	printf "\n\n *** directory for local make depository:"
735	printf "\n $make_depository"
736	printf "\n was created\n"
737	fi
738	else
739	printf "\n +++ directory for local make depository:"
740	printf "\n $make_depository"
741	printf "\n cannot be created"
742	locat=local_depository; exit
743	fi
744	fi
745
746	# COPY SOURCE-CODE FROM REPOSITORY TO MAKE-DEPOSITORY
747	if [[ $silent = false ]]
748	then
749	echo " "
750	echo " *** untar current source sources on local host in"
751	echo " $make_depository"
752	fi
753	cd $make_depository
754	cp $source_path/${program_name}_sources.tar .
755	tar xf ${program_name}_sources.tar
756
757
758	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
759	if [[ $silent = false ]]
760	then
761	echo " "
762	echo " *** creating utilities on local host"
763	fi
764	make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
765	mv agent_preprocessing $source_path/../SCRIPTS/.
766
767
768	# CALL MAKE ON LOCAL HOST USING THE OPTIONS DETERMINED FURTHER ABOVE
769	if [[ $silent = false ]]
770	then
771	echo " "
772	echo " *** compile PALM sources on local host"
773	fi
774
775	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options" 2>&1 \| tee ${host_configuration}_last_make_protocol
776
777	if [[ $? != 0 ]]
778	then
779	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
780	if [[ $silent = false ]]
781	then
782	answer=dummy
783	printf "\n"
784	while [[ "$answer" != c && "$answer" != k ]]
785	do
786	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
787	read answer
788	if [[ "$answer" = l ]]
789	then
790	more ${host_configuration}_last_make_protocol
791	fi
792	done
793	if [[ $answer = k ]]
794	then
795	locat=user_abort; exit
796	fi
797	else
798	# ABORT ANYWAY
799	locat=user_abort; exit
800	fi
801	fi
802
803
804	# TAR NEW VERSION ON LOCAL HOST
805	if [[ $silent = false ]]
806	then
807	printf "\n *** tar update on local host ..."
808	fi
809	tar -cf ${program_name}_current_version.tar ${program_name} .$suf .o .mod .x
810
811	else
812
813	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
814	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
815	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
816
817	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
818	# AND ASK, IF THEY SHALL BE USED
819	if [[ -d ${fast_io_catalog}/${sources_for_run_catalog} && $use_existing_sources_folder = true ]]
820	then
821	printf "\a\n *** compiled sources for run \"$jobname\" found on local host in folder"
822	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
823	printf "\n will be used!"
824	exit
825	fi
826
827	# SECOND CHECK, IF A DEPOSITORY EXISTS ON THE LOCAL MACHINE
828	if [[ ! -d ${make_depository} ]]
829	then
830	printf "\n +++ directory for local make depository:"
831	printf "\n $make_depository"
832	printf "\n not found. Please run \"palmbuild -h $host_configuration\" "
833	locat=make_depository; exit
834	fi
835
836
837	# COPY MAKE DEPOSITORY ON LOCAL MACHINE TO SOURCES_FOR_RUN_...
838	if [[ $silent = false ]]
839	then
840	printf "\n *** copy MAKE_DEPOSITORY_${host_configuration} on local host to "
841	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} \n"
842	fi
843	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
844	mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}
845	cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}
846	cd $fast_io_catalog/${sources_for_run_catalog}
847	tar xf ${program_name}_current_version.tar
848
849
850	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_...
851	# IN THE FAST_IO_CATALOG ON THE LOCAL MACHINE
852	if [[ $silent = false ]]
853	then
854	printf "\n *** copy ${base_directory}/${sources_for_run_catalog} to"
855	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} on local host \n"
856	fi
857	cp ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${fast_io_catalog}/${sources_for_run_catalog}
858
859
860	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
861	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
862	then
863
864	if [[ $silent = false ]]
865	then
866	echo " *** execute \"make\" on local host"
867	fi
868	[[ "$login_init_cmd" != "" ]] && $login_init_cmd
869	[[ "$module_commands" != "" ]] && $module_commands
870
871	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
872
873	if [[ $? != 0 ]]
874	then
875
876	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
877	if [[ $silent = false ]]
878	then
879	answer=dummy
880	printf "\n"
881	while [[ "$answer" != c && "$answer" != k ]]
882	do
883	printf " >>> continue / kill palmbuild (c/k) ? "
884	read answer
885	done
886	if [[ $answer = k ]]
887	then
888	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
889	locat=user_abort; exit
890	fi
891	else
892	# ABORT ANYWAY
893	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
894	locat=user_abort; exit
895	fi
896	fi
897
898	else
899
900	echo " *** nothing to compile for this run"
901
902	fi
903
904	fi
905	fi

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