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source: palm/trunk/SCRIPTS/palmbuild @ 2865

Last change on this file since 2865 was 2834, checked in by raasch, 7 years ago
fname renamed jobname
Property svn:executable set to ``* Property svn:keywords set to `Rev`
File size: 31.0 KB

Line
1	#!/bin/bash
2
3	# palmbuild - script for compiling the PALM code and its utility programs
4
5	#------------------------------------------------------------------------------#
6	# This file is part of the PALM model system.
7	#
8	# PALM is free software: you can redistribute it and/or modify it under the terms
9	# of the GNU General Public License as published by the Free Software Foundation,
10	# either version 3 of the License, or (at your option) any later version.
11	#
12	# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
13	# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
14	# A PARTICULAR PURPOSE. See the GNU General Public License for more details.
15	#
16	# You should have received a copy of the GNU General Public License along with
17	# PALM. If not, see <http://www.gnu.org/licenses/>.
18	#
19	# Copyright 2017-2018 Leibniz Universitaet Hannover
20	#------------------------------------------------------------------------------#
21	#
22	# Current revisions:
23	# ------------------
24	#
25	#
26	# Former revisions:
27	# -----------------
28	# $Id: palmbuild 2718 2018-01-02 08:49:38Z maronga $
29	# "fname" renamed to "jobname"
30	#
31	# 2718 2018-01-02 08:49:38Z maronga
32	# Corrected "Former revisions" section
33	#
34	# 2696 2017-12-14 17:12:51Z kanani
35	# Change in file header (GPL part)
36	#
37	# 2566 2017-10-20 08:50:47Z raasch
38	# informative messages switched of almost completely in silent mode
39	# two header blocks merged into one
40	#
41	# 2506 2017-09-29 08:30:37Z raasch
42	# option -V added to check for an existing SOURCES_FOR_RUN_... folder
43	# host configuration added to SOURCES_FOR_RUN_... folder name
44	# SOURCES_FOR_RUN_... folder is deleted in case of compilation errors
45	# host_identifier renamed host_configuration
46	#
47	# 2500 2017-09-25 11:10:03Z raasch
48	# bugfix for r2492
49	#
50	# 2492 2017-09-21 14:18:48Z raasch
51	# ask for compilation, if SOURCES_FOR_RUN_... exists
52	#
53	# 2487 2017-09-21 11:30:10Z raasch
54	# bugfix: abort in case of compiling/linking errors in silent mode
55	#
56	# 2422 2017-09-08 08:25:41Z raasch
57	# initial revision
58	#
59	#------------------------------------------------------------------------------#
60	# palmbuild - script for compiling the PALM code and its utility programs
61	#
62	# Procedure to compile code on local and remote hosts using the
63	# make-mechanism. The source code must be provided on the local host.
64	#
65	# @note This script does not work on MAC OS
66	#------------------------------------------------------------------------------#
67
68
69	# VARIABLE DECLARATIONS + DEFAULT VALUES
70	calltime=""
71	column1=""
72	column2=""
73	host_configuration=default
74	locat=normal
75	makefile=""
76	make_options=""
77	module_commands=""
78	program_name=palm
79	remote_ip=""
80	silent=false
81	ssh_key=""
82	suf=f90
83	use_existing_sources_folder=false
84	version="palmbuild 1.0 Rev$Rev: 2834 $"
85	working_directory=`pwd`
86
87
88
89	# ERROR HANDLING
90	# IN CASE OF EXIT:
91	trap 'rm -rf ${source_path}/${host_configuration}_last_make_protocol
92	if [[ $locat != normal ]]
93	then
94	printf "\n\n +++ palmbuild killed \n\n"
95	exit 1
96	else
97	if [[ $silent = false ]]
98	then
99	printf "\n\n *** palmbuild finished \n\n"
100	fi
101	exit 0
102	fi
103	' exit
104
105
106	# IN CASE OF TERMINAL-BREAK:
107	trap 'printf "\n\n +++ palmbuild killed by \"^C\" \n\n"
108	rm ${source_path}/${host_configuration}_last_make_protocol
109	exit
110	' 2
111
112
113
114	# READ SHELLSCRIPT-OPTIONS
115	while getopts :d:h:m:s:S:uvV option
116	do
117	case $option in
118	(d) jobname=$OPTARG;;
119	(h) host_configuration=$OPTARG;;
120	(m) makefile=$OPTARG;;
121	(s) suf=$OPTARG;;
122	(S) source_list="$OPTARG";;
123	(v) silent=true;;
124	(V) use_existing_sources_folder=true;;
125	(\?) printf "\n +++ unknown option $OPTARG \n";
126	locat=parameter; exit;;
127	esac
128	done
129
130
131	# FOR COMPATIBILITY REASONS SET OLD ENVIRONMENT VARIABLE
132	export fname=$jobname
133
134
135	# BUILD THE CONFIGURATION-FILE NAME AND THE SOURCES_FOR_RUN-FOLDER NAME
136	config_file=.palm.config.$host_configuration
137	sources_for_run_catalog=SOURCES_FOR_RUN_${host_configuration}_$jobname
138
139
140	# CHECK, IF CONFIGURATION-FILE EXISTS
141	if [[ ! -f $config_file ]]
142	then
143	printf "\n +++ configuration file: "
144	printf "\n $config_file"
145	printf "\n does not exist"
146	locat=configuration; exit
147	fi
148
149
150	# ### is this really required?
151	config_file=$PWD/$config_file
152
153
154	# READ VARIABLE SETTINGS FROM CONFIG FILE LINE BY LINE
155	while read line
156	do
157
158	# FIRST REPLACE ENVIRONMENT-VARIABLES BY THEIR RESPECTIVE VALUES
159	eval line=\"$line\"
160
161
162	# INTERPRET THE LINE
163	if [[ "$(echo $line)" = "" ]]
164	then
165
166	# EMPTY LINE, NO ACTION
167	continue
168
169	elif [[ "$(echo $line \| cut -c1)" = "#" ]]
170	then
171
172	# LINE IS A COMMENT LINE
173	continue
174
175	elif [[ "$(echo $line \| cut -c1)" = "%" ]]
176	then
177
178	# LINE DEFINES AN ENVIRONMENT-VARIABLE
179	var=`echo $line \| cut -d" " -s -f1 \| cut -c2-`
180	value=`echo $line \| cut -d" " -s -f2-`
181
182	# REPLACE ":" BY " " IN COMPILER- CPP- OR LINKER-OPTIONS,
183	# "::" IS REPLACED BY ":".
184	#value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
185
186
187	# VALUE FROM THE CONFIGURATION-FILE IS ASSIGNED TO THE
188	# ENVIRONMENT-VARIABLE, BUT ONLY IF NO VALUE HAS BEEN ALREADY
189	# ASSIGNED WITHIN THIS SCRIPT (E.G. BY SCRIPT-OPTIONS).
190	# NON-ASSIGNED VARIABLES HAVE VALUE "" OR 0 (IN CASE OF INTEGER).
191	# HENCE THE GENERAL RULE IS: SCRIPT-OPTION OVERWRITES THE
192	# CONFIGURATION-FILE.
193	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
194	then
195	eval export $var="\$value"
196
197	# TERMINAL OUTPUT OF ENVIRONMENT-VARIABLES, IF TRACEBACK IS SWITCHED on
198	if [[ $do_trace = true ]]
199	then
200	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
201	fi
202	fi
203
204	else
205
206	# SKIP ALL OTHER LINES
207	continue
208
209	fi
210
211	done < $config_file
212
213
214	# CHECK, IF THE BASE DIRECTORY PATH HAS BEEN GIVEN
215	if [[ "$base_directory" = "" ]]
216	then
217	printf "\n +++ no base directory found in configuration file"
218	locat=config_file; exit
219	else
220	if [[ ! -d $base_directory ]]
221	then
222	printf "\n\n +++ base directory \"$base_directory\" "
223	printf "\n does not exist"
224	locat=source_path; exit
225	fi
226	fi
227
228
229	# CHECK SOURCE-CODE PATH
230	if [[ "$source_path" = "" ]]
231	then
232	printf "\n +++ no source path found in configuration file"
233	locat=config_file; exit
234	else
235	if [[ ! -d $source_path ]]
236	then
237	printf "\n\n +++ source path \"$source_path\" "
238	printf "\n does not exist"
239	locat=source_path; exit
240	fi
241	fi
242
243
244	# CHECK MAKEFILE
245	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
246	if [[ ! -f $makefile ]]
247	then
248	printf "\n +++ makefile: "
249	printf "\n $makefile"
250	printf "\n does not exist"
251	locat=makefile; exit
252	fi
253
254
255	# CHECK COMPILERNAME
256	if [[ "$compiler_name" = "" ]]
257	then
258	printf "\n +++ no compiler name found in configuration file"
259	locat=config_file; exit
260	fi
261
262
263	# CHECK SERIAL COMPILERNAME
264	if [[ "$compiler_name_ser" = "" ]]
265	then
266	printf "\n +++ no compiler name for serial compilation in configuration file"
267	locat=config_file; exit
268	fi
269
270
271	# DETERMINE SSH-KEY TO BE USED
272	if [[ "$ssh_key" != "" ]]
273	then
274	ssh_key="-i $HOME/.ssh/`echo $line \| cut -d" " -s -f2`"
275	fi
276
277
278	#CHECK CPP-OPTIONS
279	if [[ "$cpp_options" = "" ]]
280	then
281	printf "\n +++ WARNING: no cpp-options found in configuration file"
282	fi
283
284
285	# CHECK SETTINGS IN CASE OF COMPILING ON REMOTE MACHINE
286	if [[ "$remote_ip" != "" ]]
287	then
288
289	if [[ "$remote_username" = "" ]]
290	then
291	printf "\n +++ no user name given in configuration file"
292	locat=config_file; exit
293	fi
294
295	# GET SOURCE AND DEPOSITORY PATH ON THE REMOTE MACHINE WITHOUT EVALUATING
296	# THE $
297	# IF NOT GIVEN, USE THE LOCAL SOURCE AND DEPOSITORY PATH
298	line=`grep %remote_source_path $config_file`
299	if [[ "$line" != "" ]]
300	then
301	remote_source_path=`echo $line \| cut -d" " -s -f2`
302	else
303	line=`grep %source_path $config_file`
304	remote_source_path=`echo $line \| cut -d" " -s -f2`
305	fi
306
307	line=`grep %base_directory $config_file`
308	make_depository=`echo $line \| cut -d" " -s -f2`/MAKE_DEPOSITORY_${host_configuration}
309
310	else
311
312	make_depository=${base_directory}/MAKE_DEPOSITORY_${host_configuration}
313
314	fi
315
316	# HEADER-OUTPUT (PART1: MESSAGES CONCERNING THE LOCAL HOST)
317	if [[ $silent = false ]]
318	then
319	calltime=$(date)
320	printf "\n"
321	printf "#------------------------------------------------------------------------# \n"
322	printf "\| %-40s%30s \| \n" "$version" "$calltime"
323	printf "\| \| \n"
324	printf "\| %-13s%-57s \| \n" "called on:" "$(hostname) (IP:$local_ip)"
325	column2=$(echo $config_file \| cut -c1-57 )
326	printf "\| %-13s%-57s \| \n" "config file:" "$column2"
327	line=$(echo "$config_file" \| cut -c58-)
328	while [[ "$line" != "" ]]
329	do
330	column1=""
331	column2=$(echo $line \| cut -c1-57 )
332	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
333	line=$(echo "$line" \| cut -c58-)
334	done
335	column2=$(echo $makefile \| cut -c1-57 )
336	printf "\| %-13s%-57s \| \n" "makefile:" "$column2"
337	line=$(echo "$makefile" \| cut -c58-)
338	while [[ "$line" != "" ]]
339	do
340	column1=""
341	column2=$(echo $line \| cut -c1-57 )
342	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
343	line=$(echo "$line" \| cut -c58-)
344	done
345	column2=$(echo $source_path \| cut -c1-57 )
346	printf "\| %-13s%-57s \| \n" "source path:" "$column2"
347	line=$(echo "$source_path" \| cut -c58-)
348	while [[ "$line" != "" ]]
349	do
350	column1=""
351	column2=$(echo $line \| cut -c1-57 )
352	printf "\| %-13s%-57s \| \n" "$column1" "$column2"
353	line=$(echo "$line" \| cut -c58-)
354	done
355	printf "\| \| \n"
356
357	if [[ "$remote_ip" != "" ]]
358	then
359	column2="$host_configuration"
360	printf "\| %-20s%-50s \| \n" "host configuration:" "$column2"
361	column2=$(echo "$make_depository" \| cut -c1-50 )
362	printf "\| %-20s%-50s \| \n" "remote depository:" "$column2"
363	else
364	column2="$host_configuration"
365	printf "\| %-20s%-50s \| \n" "host identifier:" "$column2"
366	column2=$(echo "$make_depository" \| cut -c1-50 )
367	printf "\| %-20s%-50s \| \n" "local depository:" "$column2"
368	fi
369	line=$(echo "$make_depository" \| cut -c51-)
370	while [[ "$line" != "" ]]
371	do
372	column1=""
373	column2=$(echo "$line" \| cut -c1-50 )
374	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
375	line=$(echo "$line" \| cut -c51-)
376	done
377
378	if [[ "$remote_ip" != "" ]]
379	then
380	printf "\| %-20s%-50s \| \n" "remote username:" "$remote_username"
381	printf "\| %-20s%-50s \| \n" "remote address:" "$remote_ip"
382	else
383	printf "\| %-20s%-50s \| \n" "username:" "$local_username"
384	printf "\| %-20s%-50s \| \n" "address:" "$local_ip"
385	fi
386
387	printf "\| %-20s%-50s \| \n" "compiler:" "$compiler_name"
388	printf "\| %-20s%-50s \| \n" "serial compiler:" "$compiler_name_ser"
389
390	if [[ "$make_options" != "" ]]
391	then
392	printf "\| %-20s%-50s \| \n" "make options:" "$make_options"
393	fi
394	column2=$(echo "$cpp_options" \| cut -c1-50 )
395	printf "\| %-20s%-50s \| \n" "cpp options:" "$column2"
396	line=$(echo "$cpp_options" \| cut -c51-)
397	while [[ "$line" != "" ]]
398	do
399	column1=""
400	column2=$(echo "$line" \| cut -c1-50 )
401	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
402	line=$(echo "$line" \| cut -c51-)
403	done
404	column2=$(echo "$compiler_options" \| cut -c1-50 )
405	printf "\| %-20s%-50s \| \n" "compiler options:" "$column2"
406	line=$(echo "$compiler_options" \| cut -c51-)
407	while [[ "$line" != "" ]]
408	do
409	column1=""
410	column2=$(echo "$line" \| cut -c1-50 )
411	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
412	line=$(echo "$line" \| cut -c51-)
413	done
414	column2=$(echo "$linker_options" \| cut -c1-50 )
415	printf "\| %-20s%-50s \| \n" "linker options:" "$column2"
416	line=$(echo "$linker_options" \| cut -c51-)
417	while [[ "$line" != "" ]]
418	do
419	column1=""
420	column2=$(echo "$line" \| cut -c1-50 )
421	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
422	line=$(echo "$line" \| cut -c51-)
423	done
424	if [[ "$login_init_cmd" != "" ]]
425	then
426	column2=$(echo "$login_init_cmd" \| cut -c1-50 )
427	printf "\| %-20s%-50s \| \n" "login init command:" "$column2"
428	line=$(echo "$login_init_cmd" \| cut -c51-)
429	while [[ "$line" != "" ]]
430	do
431	column1=""
432	column2=$(echo "$line" \| cut -c1-50 )
433	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
434	line=$(echo "$line" \| cut -c51-)
435	done
436	fi
437	if [[ "$module_commands" != "" ]]
438	then
439	column2=$(echo "$module_commands" \| cut -c1-50 )
440	printf "\| %-20s%-50s \| \n" "module command(s):" "$column2"
441	line=$(echo "$module_commands" \| cut -c51-)
442	while [[ "$line" != "" ]]
443	do
444	column1=""
445	column2=$(echo "$line" \| cut -c1-50 )
446	printf "\| %-20s%-50s \| \n" "$column1" "$column2"
447	line=$(echo "$line" \| cut -c51-)
448	done
449	fi
450	printf "#------------------------------------------------------------------------# \n"
451
452	answer=dummy
453	printf "\n"
454	while [[ "$answer" != y && "$answer" != Y && "$answer" != c && "$answer" != C && "$answer" != s && "$answer" != S && "$answer" != a && "$answer" != A ]]
455	do
456	printf " >>> continue (y(es)/c(ontinue)/a(bort)) ? "
457	read answer
458	done
459	if [[ $answer = a \|\| $answer = A ]]
460	then
461	locat=user_abort; exit
462	fi
463	if [[ $answer = c \|\| $answer = C ]]
464	then
465	silent=true
466	fi
467	fi
468
469
470	# TAR THE SOURCES AND MAKEFILES
471	# UTILITIES ARE TEMPORARILY COPIED TO THE SOURCE DIRECTORY IN ORDER TO TAR
472	# THEM TOO
473	if [[ $silent = false ]]
474	then
475	printf "\n\n *** tar of makefile and source files in"
476	printf "\n $source_path\n"
477	fi
478	cd $source_path
479	cp -p ../UTIL/combine_plot_fields.f90 .
480	cp -p ../UTIL/compare_palm_logs.f90 .
481	cp -p ../UTIL/Makefile_utilities .
482	tar -cf ${program_name}_sources.tar Makefile* *.$suf
483	rm combine_plot_fields.f90 compare_palm_logs.f90 Makefile_utilities
484
485
486	# MAKE ON REMOTE HOST
487	if [[ "$remote_ip" != "" ]]
488	then
489
490	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_...
491	if [[ "$jobname" = "" ]]
492	then
493
494	# COPY CURRENT SOURCE CODE TO SOURCE-CODE DIRECTORY ON THE REMOTE HOST
495	# CREATE THIS DIRECTORY, IF IT DOES NOT EXIST
496	if [[ $silent = false ]]
497	then
498	echo " "
499	echo " *** copying \"${program_name}_sources.tar\" to \"${remote_ip}:${make_depository}/\" "
500	echo "[[ ! -d ${make_depository} ]] && (echo \" *** ${make_depository} will be created\"; mkdir -p ${make_depository})" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
501	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar
502	else
503	echo "[[ ! -d ${make_depository} ]] && mkdir -p ${make_depository}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
504	scp $ssh_key ${source_path}/${program_name}_sources.tar ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar > /dev/null
505	fi
506
507
508
509
510	# UNTAR PREVIOUS UPDATE ON REMOTE HOST, IF EXISTING
511	if [[ $silent = false ]]
512	then
513	echo " *** untar previous update on remote host, if existing"
514	fi
515	echo "cd ${make_depository}; [[ -f ${program_name}_current_version.tar ]] && tar -xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
516
517
518	# UNTAR CURRENT SOURCES ON REMOTE HOST
519	if [[ $silent = false ]]
520	then
521	echo " *** untar current sources on remote host"
522	fi
523	echo "cd ${make_depository}; tar -xf ${program_name}_sources.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
524
525
526	# CREATE INIT AND MODULE COAMMNDS
527	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
528	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
529
530
531	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
532	if [[ $silent = false ]]
533	then
534	echo " "
535	echo " *** creating utilities on remote host"
536	fi
537	make_call_string="make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
538	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
539
540	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
541	then
542	printf "\a\n +++ error(s) occurred during compiling or linking of utilities"
543	printf "\n for host configuration \"$host_configuration\" "
544	if [[ $silent = false ]]
545	then
546	answer=dummy
547	printf "\n"
548	while [[ "$answer" != c && "$answer" != k ]]
549	do
550	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
551	read answer
552	if [[ "$answer" = l ]]
553	then
554	more ${host_configuration}_last_make_protocol
555	fi
556	done
557	if [[ $answer = k ]]
558	then
559	locat=user_abort; exit
560	fi
561	else
562	# ABORT ANYWAY
563	locat=user_abort; exit
564	fi
565	fi
566
567
568	# NOW COMPILE THE PALM CODE
569	# COMMANDS WILL BE COMMUNICATED TO SSH VIA PIPE, SINCE THIS WAY THE SYSTEM- AND
570	# USER-PROFILES OF THE SHELL ARE COMPLETELY EXECUTED (OTHERWISE, MAKE
571	# MAY E.G. MISS THE COMPILER-PATHS)
572	if [[ $silent = false ]]
573	then
574	echo " "
575	echo " *** compile PALM sources on remote host"
576	fi
577	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
578	echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
579
580	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
581	then
582	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
583	if [[ $silent = false ]]
584	then
585	answer=dummy
586	printf "\n"
587	while [[ "$answer" != c && "$answer" != k ]]
588	do
589	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
590	read answer
591	if [[ "$answer" = l ]]
592	then
593	more ${host_configuration}_last_make_protocol
594	fi
595	done
596	if [[ $answer = k ]]
597	then
598	locat=user_abort; exit
599	fi
600	else
601	# ABORT ANYWAY
602	locat=user_abort; exit
603	fi
604	fi
605
606	# TAR UPDATED VERSION ON THE REMOTE HOST
607	if [[ $silent = false ]]
608	then
609	printf "\n *** tar update on remote host ..."
610	fi
611	echo "cd ${make_depository}; chmod u+w ; tar -cf ${program_name}_current_version.tar ${program_name} .f90 .o .mod *.x" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
612
613
614	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
615	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
616	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
617	elif [[ "$jobname" != "" ]]
618	then
619
620	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
621	# AND ASK, IF THEY SHALL BE USED
622	echo "[[ -d ${fast_io_catalog}/${sources_for_run_catalog} ]] && echo sources for run found" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 > ${host_configuration}_last_make_protocol
623	if [[ $(grep -c "sources for run found" ${host_configuration}_last_make_protocol) != 0 && $use_existing_sources_folder = true ]]
624	then
625	printf "\a\n *** compiled sources for run \"$jobname\" found on remote host in folder"
626	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
627	printf "\n will be used!"
628	exit
629	fi
630
631	# COPY MAKE DEPOSITORY ON REMOTE MACHINE TO SOURCES_FOR_RUN_...
632	if [[ $silent = false ]]
633	then
634	printf "\n *** copy MAKE_DEPOSITORY_${host_configuration} on remote host to $sources_for_run_catalog \n"
635	fi
636	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}; mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}; cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}; cd ${fast_io_catalog}/${sources_for_run_catalog}; tar xf ${program_name}_current_version.tar" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
637
638
639	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_... ON THE REMOTE MACHINE
640	if [[ $silent = false ]]
641	then
642	printf "\n *** copy ${base_directory}/${sources_for_run_catalog}"
643	printf "\n to $sources_for_run_catalog on remote host \n"
644	fi
645	scp -q $ssh_key ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${remote_username}@${remote_ip}:${fast_io_catalog}/${sources_for_run_catalog}
646
647
648	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
649	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
650	then
651
652	make_call_string="make $make_options PROG=$program_name F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$compiler_options\" LDFLAGS=\"$linker_options\" "
653	[[ "$login_init_cmd" != "" ]] && login_init_cmd=${login_init_cmd}";"
654	[[ "$module_commands" != "" ]] && module_commands=${module_commands}";"
655	if [[ $silent = false ]]
656	then
657	echo " *** execute \"make\" on remote host"
658	fi
659	echo "$login_init_cmd $module_commands cd ${fast_io_catalog}/${sources_for_run_catalog}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1 \| tee ${host_configuration}_last_make_protocol
660
661	if [[ $(grep -c MAKE_ERROR ${host_configuration}_last_make_protocol) != 0 ]]
662	then
663	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
664	if [[ $silent = false ]]
665	then
666	answer=dummy
667	printf "\n"
668	while [[ "$answer" != c && "$answer" != k ]]
669	do
670	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
671	read answer
672	if [[ "$answer" = l ]]
673	then
674	more ${host_configuration}_last_make_protocol
675	fi
676	done
677	if [[ $answer = k ]]
678	then
679	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
680	locat=user_abort; exit
681	fi
682	else
683	# ABORT ANYWAY
684	echo "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}" \| ssh -q $ssh_key ${remote_username}@${remote_ip} 2>&1
685	locat=user_abort; exit
686	fi
687	fi
688
689	else
690
691	echo " *** nothing to compile for this run"
692
693	fi
694
695	fi
696
697	rm -rf ${source_path}/${host_configuration}_last_make_protocol
698
699
700	# MAKE ON LOCAL HOST
701	else
702
703
704	# NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_... ON THE
705	# LOCAL HOST
706	if [[ "$jobname" = "" ]]
707	then
708
709	# SET THE ENVIRONMENT (EXECUTE INIT AND MODULE COMMANDS)
710	if [[ "$login_init_cmd" != "" ]]
711	then
712	$login_init_cmd
713	fi
714
715	if [[ "$module_commands" != "" ]]
716	then
717	$module_commands
718	fi
719
720
721	# CREATE MAKE-DEPOSITORY, IF IT DOES NOT EXIST
722	eval make_depository=$make_depository
723	if [[ ! -d $make_depository ]]
724	then
725	if mkdir -p $make_depository
726	then
727	if [[ $silent = false ]]
728	then
729	printf "\n\n *** directory for local make depository:"
730	printf "\n $make_depository"
731	printf "\n was created\n"
732	fi
733	else
734	printf "\n +++ directory for local make depository:"
735	printf "\n $make_depository"
736	printf "\n cannot be created"
737	locat=local_depository; exit
738	fi
739	fi
740
741	# COPY SOURCE-CODE FROM REPOSITORY TO MAKE-DEPOSITORY
742	if [[ $silent = false ]]
743	then
744	echo " "
745	echo " *** untar current source sources on local host in"
746	echo " $make_depository"
747	fi
748	cd $make_depository
749	cp $source_path/${program_name}_sources.tar .
750	tar xf ${program_name}_sources.tar
751
752
753	# FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
754	if [[ $silent = false ]]
755	then
756	echo " "
757	echo " *** creating utilities on local host"
758	fi
759	make -f Makefile_utilities $make_options F90=$compiler_name F90_SER=$compiler_name_ser COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
760
761
762	# CALL MAKE ON LOCAL HOST USING THE OPTIONS DETERMINED FURTHER ABOVE
763	if [[ $silent = false ]]
764	then
765	echo " "
766	echo " *** compile PALM sources on local host"
767	fi
768
769	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options" 2>&1 \| tee ${host_configuration}_last_make_protocol
770
771	if [[ $? != 0 ]]
772	then
773	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
774	if [[ $silent = false ]]
775	then
776	answer=dummy
777	printf "\n"
778	while [[ "$answer" != c && "$answer" != k ]]
779	do
780	printf " >>> continue / list errors / kill palmbuild (c/l/k) ? "
781	read answer
782	if [[ "$answer" = l ]]
783	then
784	more ${host_configuration}_last_make_protocol
785	fi
786	done
787	if [[ $answer = k ]]
788	then
789	locat=user_abort; exit
790	fi
791	else
792	# ABORT ANYWAY
793	locat=user_abort; exit
794	fi
795	fi
796
797
798	# TAR NEW VERSION ON LOCAL HOST
799	if [[ $silent = false ]]
800	then
801	printf "\n *** tar update on local host ..."
802	fi
803	tar -cf ${program_name}_current_version.tar ${program_name} .$suf .o .mod .x
804
805	else
806
807	# NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
808	# INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
809	# COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
810
811	# FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
812	# AND ASK, IF THEY SHALL BE USED
813	if [[ -d ${fast_io_catalog}/${sources_for_run_catalog} && $use_existing_sources_folder = true ]]
814	then
815	printf "\a\n *** compiled sources for run \"$jobname\" found on local host in folder"
816	printf "\n ${fast_io_catalog}/${sources_for_run_catalog}"
817	printf "\n will be used!"
818	exit
819	fi
820
821	# SECOND CHECK, IF A DEPOSITORY EXISTS ON THE LOCAL MACHINE
822	if [[ ! -d ${make_depository} ]]
823	then
824	printf "\n +++ directory for local make depository:"
825	printf "\n $make_depository"
826	printf "\n not found. Please run \"palmbuild -h $host_configuration\" "
827	locat=make_depository; exit
828	fi
829
830
831	# COPY MAKE DEPOSITORY ON LOCAL MACHINE TO SOURCES_FOR_RUN_...
832	if [[ $silent = false ]]
833	then
834	printf "\n *** copy MAKE_DEPOSITORY_${host_configuration} on local host to "
835	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} \n"
836	fi
837	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
838	mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}
839	cp ${make_depository}/${program_name}_current_version.tar ${fast_io_catalog}/${sources_for_run_catalog}
840	cd $fast_io_catalog/${sources_for_run_catalog}
841	tar xf ${program_name}_current_version.tar
842
843
844	# COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_...
845	# IN THE FAST_IO_CATALOG ON THE LOCAL MACHINE
846	if [[ $silent = false ]]
847	then
848	printf "\n *** copy ${base_directory}/${sources_for_run_catalog} to"
849	printf "\n ${fast_io_catalog}/${sources_for_run_catalog} on local host \n"
850	fi
851	cp ${base_directory}/${sources_for_run_catalog}/{,.[!.]} ${fast_io_catalog}/${sources_for_run_catalog}
852
853
854	# CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
855	if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ \| grep -c .$suf) != 0 ]]
856	then
857
858	if [[ $silent = false ]]
859	then
860	echo " *** execute \"make\" on local host"
861	fi
862	[[ "$login_init_cmd" != "" ]] && $login_init_cmd
863	[[ "$module_commands" != "" ]] && $module_commands
864
865	make $make_options PROG=$program_name F90=$compiler_name COPT="$cpp_options" F90FLAGS="$compiler_options" LDFLAGS="$linker_options"
866
867	if [[ $? != 0 ]]
868	then
869
870	printf "\a\n +++ error(s) occurred during compiling or linking for host configuration \"$host_configuration\" "
871	if [[ $silent = false ]]
872	then
873	answer=dummy
874	printf "\n"
875	while [[ "$answer" != c && "$answer" != k ]]
876	do
877	printf " >>> continue / kill palmbuild (c/k) ? "
878	read answer
879	done
880	if [[ $answer = k ]]
881	then
882	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
883	locat=user_abort; exit
884	fi
885	else
886	# ABORT ANYWAY
887	rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
888	locat=user_abort; exit
889	fi
890	fi
891
892	else
893
894	echo " *** nothing to compile for this run"
895
896	fi
897
898	fi
899	fi

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