source: palm/trunk/SCRIPTS/palmbuild @ 4843

#!/bin/bash

# palmbuild - script for compiling the PALM code and its utility programs

#------------------------------------------------------------------------------#
# This file is part of the PALM model system.
#
# PALM is free software: you can redistribute it and/or modify it under the terms
# of the GNU General Public License as published by the Free Software Foundation,
# either version 3 of the License, or (at your option) any later version.
#
# PALM is distributed in the hope that it will be useful, but WITHOUT ANY
# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
# A PARTICULAR PURPOSE.  See the GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License along with
# PALM. If not, see <http://www.gnu.org/licenses/>.
#
# Copyright 2017-2021  Leibniz Universitaet Hannover
#------------------------------------------------------------------------------#
#
# Current revisions:
# ------------------
#
#
# Former revisions:
# -----------------
# $Id: palmbuild 4843 2021-01-15 15:22:11Z raasch $
# Bugfix: do not treat empty module_commands as error
#
# 4809 2020-12-03 16:37:20Z gronemeier
# Abort if the execution of the module commands raise an error
#
# 4556 2020-06-08 06:29:28Z raasch
# bugfix for determining the ssh-key givn in the configuration file
#
# 4481 2020-03-31 18:55:54Z maronga
# Abort if SOURCES_FOR_RUN catalog cannot be created
#
# 4082 2019-07-10 14:42:00Z raasch
# bugfix for executing module commands and for interpreting linker options
# on local machines
#
# 3756 2019-02-20 11:24:32Z suehring
# Disable compilation of postprocessing tool for surface output, until
# crashes with unexpected segmentation faults with intel compiler are solved.
#
# 3725 2019-02-07 10:11:02Z raasch
# ssh-calls for compilations on remote systems modified to avoid output
# of login messages on specific systems changed again (reverted as before r3549)
#
# 3549 2018-11-21 15:44:44Z raasch
# ssh-calls for compilations on remote systems modified to avoid output
# of login messages on specific systems
#
# 3534 2018-11-19 15:35:16Z raasch
# build of inifor added,
# ssh-calls rearranged to avoid output of system/user-profile messages
#
# 3523 2018-11-13 16:09:31Z suehring
# Enable compilation of post-processing tool for surface output - interface
# for posix conform sytemcalls is implemented.
#
# 3499 2018-11-07 10:55:15Z suehring
# Temporarily avoid compilation of post-processing tool for surface output
# until a workaround for compiler-specific intrinsic functions is found.
#
# 3494 2018-11-06 14:51:27Z suehring
# Add tool for surface-output post-processing
#
# 3455 2018-10-30 14:12:31Z raasch
# options -h and -d renamed -c and -r, respectively
#
# 3312 2018-10-06 14:15:46Z knoop
# "host identifier" in header output renamed "config. identifier",
# host_configuration renamed configuration_identifier,
# jobname renamed run_identifier
# header output of PALM code revision,
# options -m, -s, and -S removed
#
# 3210 2018-08-28 07:31:13Z sward
# Bugfix: agent_preprocessing stays in MAKE_DEPOSITORY after compilation
#
# 3208 2018-08-27 13:10:50Z sward
# Added building of agent_preprocessing
#
# 3033 2018-05-23 15:26:19Z raasch
# "fname" renamed to "jobname"
#
# 2718 2018-01-02 08:49:38Z maronga
# Corrected "Former revisions" section
#
# 2696 2017-12-14 17:12:51Z kanani
# Change in file header (GPL part)
#
# 2566 2017-10-20 08:50:47Z raasch
# informative messages switched of almost completely in silent mode
# two header blocks merged into one
#
# 2506 2017-09-29 08:30:37Z raasch
# option -V added to check for an existing SOURCES_FOR_RUN_... folder
# host configuration added to SOURCES_FOR_RUN_... folder name
# SOURCES_FOR_RUN_... folder is deleted in case of compilation errors
# host_identifier renamed host_configuration
#
# 2500 2017-09-25 11:10:03Z raasch
# bugfix for r2492
#
# 2492 2017-09-21 14:18:48Z raasch
# ask for compilation, if SOURCES_FOR_RUN_... exists
#
# 2487 2017-09-21 11:30:10Z raasch
# bugfix: abort in case of compiling/linking errors in silent mode
#
# 2422 2017-09-08 08:25:41Z raasch
# initial revision
#
#------------------------------------------------------------------------------#
# palmbuild - script for compiling the PALM code and its utility programs
#
# Procedure to compile code on local and remote hosts using the
# make-mechanism. The source code must be provided on the local host.
#
# @note This script does not work on MAC OS
#------------------------------------------------------------------------------#


    # VARIABLE DECLARATIONS + DEFAULT VALUES
 calltime=""
 column1=""
 column2=""
 configuration_identifier=default
 global_revision=""
 locat=normal
 makefile=""
 make_options=""
 module_commands=""
 program_name=palm
 remote_ip=""
 silent=false
 ssh_key=""
 suf=f90
 use_existing_sources_folder=false
 version="palmbuild  1.0  Rev$Rev: 4843 $"
 working_directory=`pwd`


    # ERROR HANDLING IN CASE OF EXIT
 trap 'rm -rf  ${source_path}/${configuration_identifier}_last_make_protocol
       if [[ $locat != normal  &&  $locat != control_c ]]
       then
          printf "\n\n+++ palmbuild crashed \n\n"
          exit 1
       elif [[ $locat != normal ]]
       then
          printf "\n+++ palmbuild killed by \"^C\" \n\n"
          exit 2
       else
          if [[ $silent = false ]]
          then
            printf "\n --> palmbuild finished\n\n"
          fi
          exit 0
       fi' exit


    # ACTIONS IN CASE OF TERMINAL-BREAK (CONTROL-C):
 trap 'locat=control_c
       exit 1
      ' 2



    # READ SHELLSCRIPT-OPTIONS
 while  getopts  :c:r:uvV  option
 do
   case  $option  in
       (c)   configuration_identifier=$OPTARG;;
       (r)   run_identifier=$OPTARG;;
       (v)   silent=true;;
       (V)   use_existing_sources_folder=true;;
       (\?)  printf "\n  +++ unknown option $OPTARG \n";
             locat=parameter; exit;;
   esac
 done


    # BUILD THE CONFIGURATION-FILE NAME AND THE SOURCES_FOR_RUN-FOLDER NAME
 config_file=.palm.config.$configuration_identifier
 sources_for_run_catalog=SOURCES_FOR_RUN_${configuration_identifier}_$run_identifier


    # CHECK, IF CONFIGURATION-FILE EXISTS
 if [[ ! -f $config_file ]]
 then
    printf "\n  +++ configuration file: "
    printf "\n           $config_file"
    printf "\n      does not exist"
    locat=configuration; exit
 fi


    # ### is this really required?
 config_file=$PWD/$config_file


    # READ VARIABLE SETTINGS FROM CONFIG FILE LINE BY LINE
 while  read line
 do

       # FIRST REPLACE ENVIRONMENT-VARIABLES BY THEIR RESPECTIVE VALUES
    eval  line=\"$line\"


       # INTERPRET THE LINE
    if [[ "$(echo $line)" = "" ]]
    then

          # EMPTY LINE, NO ACTION
       continue

    elif [[ "$(echo $line | cut -c1)"  =  "#" ]]
    then

          # LINE IS A COMMENT LINE
       continue

    elif [[ "$(echo $line | cut -c1)"  =  "%" ]]
    then

          # LINE DEFINES AN ENVIRONMENT-VARIABLE
       var=`echo $line | cut -d" " -s -f1 | cut -c2-`
       value=`echo $line | cut -d" " -s -f2-`

          # REPLACE ":" BY " " IN COMPILER- CPP- OR LINKER-OPTIONS,
          # "::" IS REPLACED BY ":".
       #value=`echo $value | sed 's/::/%DUM%/g' | sed 's/:/ /g' | sed 's/%DUM%/:/g'`


          # VALUE FROM THE CONFIGURATION-FILE IS ASSIGNED TO THE
          # ENVIRONMENT-VARIABLE, BUT ONLY IF NO VALUE HAS BEEN ALREADY
          # ASSIGNED WITHIN THIS SCRIPT (E.G. BY SCRIPT-OPTIONS).
          # NON-ASSIGNED VARIABLES HAVE VALUE "" OR 0 (IN CASE OF INTEGER).
          # HENCE THE GENERAL RULE IS: SCRIPT-OPTION OVERWRITES THE
          # CONFIGURATION-FILE.
       if [[ "$(eval echo \$$var)" = ""  ||  "$(eval echo \$$var)" = "0" ]]
       then
          eval  export  $var="\$value"

             # TERMINAL OUTPUT OF ENVIRONMENT-VARIABLES, IF TRACEBACK IS SWITCHED on
          if [[ $do_trace = true ]]
          then
             printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
          fi
       fi

    else

          # SKIP ALL OTHER LINES
       continue

    fi

 done < $config_file


    # CHECK, IF THE BASE DIRECTORY PATH HAS BEEN GIVEN
 if [[ "$base_directory" = "" ]]
 then
    printf "\n  +++ no base directory found in configuration file"
    locat=config_file; exit
 else
    if [[ ! -d $base_directory ]]
    then
       printf "\n\n  +++ base directory \"$base_directory\" "
       printf "\n      does not exist"
       locat=source_path; exit
    fi
 fi


    # CHECK SOURCE-CODE PATH
 if [[ "$source_path" = "" ]]
 then
    printf "\n  +++ no source path found in configuration file"
    locat=config_file; exit
 else
    if [[ ! -d $source_path ]]
    then
       printf "\n\n  +++ source path \"$source_path\" "
       printf "\n      does not exist"
       locat=source_path; exit
    fi
 fi


    # CHECK MAKEFILE
 makefile=$source_path/Makefile
 if [[ ! -f $makefile ]]
 then
    printf "\n  +++ makefile: "
    printf "\n           $makefile"
    printf "\n      does not exist"
    locat=makefile; exit
 fi


    # CHECK COMPILERNAME
 if [[ "$compiler_name" = "" ]]
 then
    printf "\n  +++ no compiler name found in configuration file"
    locat=config_file; exit
 fi


    # CHECK SERIAL COMPILERNAME
 if [[ "$compiler_name_ser" = "" ]]
 then
    printf "\n  +++ no compiler name for serial compilation in configuration file"
    locat=config_file; exit
 fi


    # DETERMINE THE SSH-OPTION IN CASE THAT AN SSH-KEY IS EXPLICITLY GIVEN IN THE
    # CONFIG-FILE
 if [[ "$ssh_key" != "" ]]
 then
    ssh_key="-i $HOME/.ssh/$ssh_key"
 fi


    #CHECK CPP-OPTIONS
 if [[ "$cpp_options" = "" ]]
 then
    printf "\n  +++ WARNING: no cpp-options found in configuration file"
 fi


    # CHECK SETTINGS IN CASE OF COMPILING ON REMOTE MACHINE
 if [[ "$remote_ip" != "" ]]
 then

    if [[ "$remote_username" = "" ]]
    then
       printf "\n  +++ no user name given in configuration file"
       locat=config_file; exit
    fi

       # GET SOURCE AND DEPOSITORY PATH ON THE REMOTE MACHINE WITHOUT EVALUATING
       # THE $
       # IF NOT GIVEN, USE THE LOCAL SOURCE AND DEPOSITORY PATH
    line=`grep %remote_source_path $config_file`
    if [[ "$line" != "" ]]
    then
       remote_source_path=`echo $line | cut -d" " -s -f2`
    else
       line=`grep %source_path $config_file`
       remote_source_path=`echo $line | cut -d" " -s -f2`
    fi

    line=`grep %base_directory $config_file`
    make_depository=`echo $line | cut -d" " -s -f2`/MAKE_DEPOSITORY_${configuration_identifier}

 else

    make_depository=${base_directory}/MAKE_DEPOSITORY_${configuration_identifier}

 fi


    # GET THE GLOBAL REVISION-NUMBER OF THE SVN-REPOSITORY
 global_revision=`svnversion $source_path  2>/dev/null`
 global_revision="Rev: $global_revision"


    # HEADER-OUTPUT (PART1: MESSAGES CONCERNING THE LOCAL HOST)
 if [[ $silent = false ]]
 then
    calltime=$(date)
    printf "\n"
    printf "#------------------------------------------------------------------------# \n"
    printf "| %-40s%30s | \n" "$version" "$calltime"
    printf "| %-40s%30s | \n" "PALM code       $global_revision" " "
    printf "|                                                                        | \n"
    printf "| %-13s%-57s | \n" "called on:" "$(hostname) (IP:$local_ip)"
    column2=$(echo $config_file | cut -c1-57 )
    printf "| %-13s%-57s | \n" "config file:" "$column2"
    line=$(echo "$config_file" | cut -c58-)
    while [[ "$line" != "" ]]
    do
       column1=""
       column2=$(echo $line | cut -c1-57 )
       printf "| %-13s%-57s | \n" "$column1" "$column2"
       line=$(echo "$line" | cut -c58-)
    done
    column2=$(echo $makefile | cut -c1-57 )
    printf "| %-13s%-57s | \n" "makefile:" "$column2"
    line=$(echo "$makefile" | cut -c58-)
    while [[ "$line" != "" ]]
    do
       column1=""
       column2=$(echo $line | cut -c1-57 )
       printf "| %-13s%-57s | \n" "$column1" "$column2"
       line=$(echo "$line" | cut -c58-)
    done
    column2=$(echo $source_path | cut -c1-57 )
    printf "| %-13s%-57s | \n" "source path:" "$column2"
    line=$(echo "$source_path" | cut -c58-)
    while [[ "$line" != "" ]]
    do
       column1=""
       column2=$(echo $line | cut -c1-57 )
       printf "| %-13s%-57s | \n" "$column1" "$column2"
       line=$(echo "$line" | cut -c58-)
    done
    printf "|                                                                        | \n"

    if [[ "$remote_ip" != "" ]]
    then
       column2="$configuration_identifier"
       printf "| %-20s%-50s | \n" "config. identifier:" "$column2"
       column2=$(echo "$make_depository" | cut -c1-50 )
       printf "| %-20s%-50s | \n" "remote depository:" "$column2"
    else
       column2="$configuration_identifier"
       printf "| %-20s%-50s | \n" "config. identifier:" "$column2"
       column2=$(echo "$make_depository" | cut -c1-50 )
       printf "| %-20s%-50s | \n" "local depository:" "$column2"
    fi
    line=$(echo "$make_depository" | cut -c51-)
    while [[ "$line" != "" ]]
    do
       column1=""
       column2=$(echo "$line" | cut -c1-50 )
       printf "| %-20s%-50s | \n" "$column1" "$column2"
       line=$(echo "$line" | cut -c51-)
    done

    if [[ "$remote_ip" != "" ]]
    then
       printf "| %-20s%-50s | \n" "remote username:" "$remote_username"
       printf "| %-20s%-50s | \n" "remote address:" "$remote_ip"
    else
       printf "| %-20s%-50s | \n" "username:" "$local_username"
       printf "| %-20s%-50s | \n" "address:" "$local_ip"
    fi

    printf "| %-20s%-50s | \n" "compiler:" "$compiler_name"
    printf "| %-20s%-50s | \n" "serial compiler:" "$compiler_name_ser"

    if [[ "$make_options" != "" ]]
    then
       printf "| %-20s%-50s | \n" "make options:" "$make_options"
    fi
    column2=$(echo "$cpp_options" | cut -c1-50 )
    printf "| %-20s%-50s | \n" "cpp options:" "$column2"
    line=$(echo "$cpp_options" | cut -c51-)
    while [[ "$line" != "" ]]
    do
       column1=""
       column2=$(echo "$line" | cut -c1-50 )
       printf "| %-20s%-50s | \n" "$column1" "$column2"
       line=$(echo "$line" | cut -c51-)
    done
    column2=$(echo "$compiler_options" | cut -c1-50 )
    printf "| %-20s%-50s | \n" "compiler options:" "$column2"
    line=$(echo "$compiler_options" | cut -c51-)
    while [[ "$line" != "" ]]
    do
       column1=""
       column2=$(echo "$line" | cut -c1-50 )
       printf "| %-20s%-50s | \n" "$column1" "$column2"
       line=$(echo "$line" | cut -c51-)
    done
    column2=$(echo "$linker_options" | cut -c1-50 )
    printf "| %-20s%-50s | \n" "linker options:" "$column2"
    line=$(echo "$linker_options" | cut -c51-)
    while [[ "$line" != "" ]]
    do
       column1=""
       column2=$(echo "$line" | cut -c1-50 )
       printf "| %-20s%-50s | \n" "$column1" "$column2"
       line=$(echo "$line" | cut -c51-)
    done
    if [[ "$login_init_cmd" != "" ]]
    then
       column2=$(echo "$login_init_cmd" | cut -c1-50 )
       printf "| %-20s%-50s | \n" "login init command:" "$column2"
       line=$(echo "$login_init_cmd" | cut -c51-)
       while [[ "$line" != "" ]]
       do
          column1=""
          column2=$(echo "$line" | cut -c1-50 )
          printf "| %-20s%-50s | \n" "$column1" "$column2"
          line=$(echo "$line" | cut -c51-)
       done
    fi
    if [[ "$module_commands" != "" ]]
    then
       column2=$(echo "$module_commands" | cut -c1-50 )
       printf "| %-20s%-50s | \n" "module command(s):" "$column2"
       line=$(echo "$module_commands" | cut -c51-)
       while [[ "$line" != "" ]]
       do
          column1=""
          column2=$(echo "$line" | cut -c1-50 )
          printf "| %-20s%-50s | \n" "$column1" "$column2"
          line=$(echo "$line" | cut -c51-)
       done
    fi
    printf "#------------------------------------------------------------------------# \n"

    answer=dummy
    printf "\n"
    while [[ "$answer" != y  &&  "$answer" != Y  && "$answer" != s  &&  "$answer" != S  &&  "$answer" != a  &&  "$answer" != A ]]
    do
       printf " >>> continue (y(es)/a(bort)) ?  "
       read  answer
    done
    if [[ $answer = a  ||  $answer = A ]]
    then
       locat=user_abort; exit
    fi
 fi


    # TAR THE SOURCES AND MAKEFILES
    # UTILITIES ARE TEMPORARILY COPIED TO THE SOURCE DIRECTORY IN ORDER TO TAR
    # THEM TOO
 if [[ $silent = false ]]
 then
    printf "\n\n  *** tar of makefile and source files in"
    printf "\n      $source_path\n"
 fi
 cd  $source_path
 cp -p  ../UTIL/combine_plot_fields.f90  .
 cp -p  ../UTIL/compare_palm_logs.f90  .
 cp -p  ../UTIL/agent_preprocessing/agent_preprocessing.f90  .
 #cp -p  ../UTIL/surface_output_processing/surface_output_to_vtk.f90  .
 cp -p  ../UTIL/inifor/src/inifor*f90  .
 cp -p  ../UTIL/Makefile_utilities  .
 tar -cf  ${program_name}_sources.tar  Makefile*  *.$suf
 rm  combine_plot_fields.f90  compare_palm_logs.f90 agent_preprocessing.f90 Makefile_utilities inifor*f90 #surface_output_to_vtk.f90


    # MAKE ON REMOTE HOST
 if [[ "$remote_ip" != "" ]]
 then

       # NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_...
    if [[ "$run_identifier" = "" ]]
    then

          # COPY CURRENT SOURCE CODE TO SOURCE-CODE DIRECTORY ON THE REMOTE HOST
          # CREATE THIS DIRECTORY, IF IT DOES NOT EXIST
       if [[ $silent = false ]]
       then
          echo " "
          echo "  *** copying \"${program_name}_sources.tar\" to \"${remote_ip}:${make_depository}/\" "
          ssh  -q  $ssh_key ${remote_username}@${remote_ip}  "[[ ! -d ${make_depository} ]]  &&  (echo \"  *** ${make_depository} will be created\"; mkdir -p  ${make_depository})"  2>&1
          scp  $ssh_key ${source_path}/${program_name}_sources.tar  ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar
       else
          ssh  -q  $ssh_key ${remote_username}@${remote_ip}  "[[ ! -d ${make_depository} ]]  &&  mkdir -p  ${make_depository}"  2>&1
          scp  $ssh_key ${source_path}/${program_name}_sources.tar  ${remote_username}@${remote_ip}:${make_depository}/${program_name}_sources.tar  >  /dev/null
       fi




          # UNTAR PREVIOUS UPDATE ON REMOTE HOST, IF EXISTING
       if [[ $silent = false ]]
       then
          echo "  *** untar previous update on remote host, if existing"
       fi
       ssh  -q  $ssh_key  ${remote_username}@${remote_ip}  "cd ${make_depository}; [[ -f ${program_name}_current_version.tar ]]  &&  tar -xf  ${program_name}_current_version.tar"  2>&1


          # UNTAR CURRENT SOURCES ON REMOTE HOST
       if [[ $silent = false ]]
       then
          echo "  *** untar current sources on remote host"
       fi
       ssh  -q  $ssh_key  ${remote_username}@${remote_ip}  "cd ${make_depository}; tar -xf  ${program_name}_sources.tar"  2>&1


          # CREATE INIT AND MODULE COAMMNDS
       [[ "$login_init_cmd" != "" ]]   &&  login_init_cmd=${login_init_cmd}";"
       [[ "$module_commands" != "" ]]  &&  module_commands=${module_commands}";"


          # FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
       if [[ $silent = false ]]
       then
          echo " "
          echo "  *** creating utilities on remote host"
       fi
       make_call_string="make  -f Makefile_utilities  $make_options  F90=$compiler_name  F90_SER=$compiler_name_ser  COPT=\"$cpp_options\"  F90FLAGS=\"$compiler_options\"  LDFLAGS=\"$linker_options\" "
###       echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" | ssh  -q  $ssh_key  ${remote_username}@${remote_ip} 2>/dev/null | tee ${configuration_identifier}_last_make_protocol
       ssh  -q  $ssh_key  ${remote_username}@${remote_ip}  "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR"  2>&1 | tee ${configuration_identifier}_last_make_protocol

       if [[ $(grep -c MAKE_ERROR ${configuration_identifier}_last_make_protocol) != 0 ]]
       then
          printf "\a\n  +++ error(s) occurred during compiling or linking of utilities"
          printf "\n      for host configuration \"$configuration_identifier\" "
          if [[ $silent = false ]]
          then
             answer=dummy
             printf "\n"
             while [[ "$answer" != c  &&  "$answer" != k ]]
             do
                printf "  >>> continue / list errors / kill palmbuild (c/l/k) ? "
                read  answer
                if [[ "$answer" = l ]]
                then
                   more ${configuration_identifier}_last_make_protocol
                fi
             done
             if [[ $answer = k ]]
             then
                locat=user_abort; exit
             fi
          else
                # ABORT ANYWAY
             locat=user_abort; exit
          fi
       fi

          # NOW COMPILE THE PALM CODE
          # COMMANDS WILL BE COMMUNICATED TO SSH VIA PIPE, SINCE THIS WAY THE SYSTEM- AND
          # USER-PROFILES OF THE SHELL ARE COMPLETELY EXECUTED (OTHERWISE, MAKE
          # MAY E.G. MISS THE COMPILER-PATHS)
       if [[ $silent = false ]]
       then
          echo " "
          echo "  *** compile PALM sources on remote host"
       fi
       make_call_string="make  $make_options  PROG=$program_name  F90=$compiler_name  COPT=\"$cpp_options\"  F90FLAGS=\"$compiler_options\"  LDFLAGS=\"$linker_options\" "
###       echo "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR" | ssh  -q  $ssh_key  ${remote_username}@${remote_ip} 2>&1 | tee ${configuration_identifier}_last_make_protocol
       ssh  -q  $ssh_key  ${remote_username}@${remote_ip}  "$login_init_cmd $module_commands cd ${make_depository}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR"  2>&1 | tee ${configuration_identifier}_last_make_protocol

       if [[ $(grep -c MAKE_ERROR ${configuration_identifier}_last_make_protocol) != 0 ]]
       then
          printf "\a\n  +++ error(s) occurred during compiling or linking for host configuration \"$configuration_identifier\" "
          if [[ $silent = false ]]
          then
             answer=dummy
             printf "\n"
             while [[ "$answer" != c  &&  "$answer" != k ]]
             do
                printf "  >>> continue / list errors / kill palmbuild (c/l/k) ? "
                read  answer
                if [[ "$answer" = l ]]
                then
                   more ${configuration_identifier}_last_make_protocol
                fi
             done
             if [[ $answer = k ]]
             then
                locat=user_abort; exit
             fi
          else
                # ABORT ANYWAY
             locat=user_abort; exit
          fi
       fi

          # TAR UPDATED VERSION ON THE REMOTE HOST
       if [[ $silent = false ]]
       then
          printf "\n  *** tar update on remote host ..."
       fi
       ssh  -q  $ssh_key  ${remote_username}@${remote_ip}  "cd ${make_depository}; chmod u+w *; tar -cf  ${program_name}_current_version.tar  ${program_name}  *.f90 *.o *.mod *.x"  2>&1


       # NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
       # INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
       # COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...
    elif [[ "$run_identifier" != "" ]]
    then

          # FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
          # AND ASK, IF THEY SHALL BE USED
       ssh  -q  $ssh_key  ${remote_username}@${remote_ip}  "[[ -d ${fast_io_catalog}/${sources_for_run_catalog} ]]  &&  echo sources for run found"  2>&1  >  ${configuration_identifier}_last_make_protocol
       if [[ $(grep -c "sources for run found" ${configuration_identifier}_last_make_protocol) != 0  &&  $use_existing_sources_folder = true ]]
       then
          printf "\a\n  *** compiled sources for run \"$run_identifier\" found on remote host in folder"
          printf "\n      ${fast_io_catalog}/${sources_for_run_catalog}"
          printf "\n      will be used!"
          exit
       fi

          # COPY MAKE DEPOSITORY ON REMOTE MACHINE TO SOURCES_FOR_RUN_...
       if [[ $silent = false ]]
       then
          printf "\n  *** copy MAKE_DEPOSITORY_${configuration_identifier} on remote host to $sources_for_run_catalog \n"
       fi
       ssh  -q  $ssh_key  ${remote_username}@${remote_ip}  "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}; mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}; [[ \$? != 0 ]] && exit 1; cp ${make_depository}/${program_name}_current_version.tar  ${fast_io_catalog}/${sources_for_run_catalog}; cd ${fast_io_catalog}/${sources_for_run_catalog}; tar xf ${program_name}_current_version.tar"  2>&1
       if [[ $? != 0 ]]
       then
          printf "\n  +++ SOURCES_FOR_RUN catalog cannot be created."
          printf "\n      Check setting of variable fast_io_catalog in your config file."
          locat=temporary_working_directory
          exit
       fi


          # COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_... ON THE REMOTE MACHINE
       if [[ $silent = false ]]
       then
          printf "\n  *** copy ${base_directory}/${sources_for_run_catalog}"
          printf "\n      to $sources_for_run_catalog on remote host \n"
       fi
       scp  -q  $ssh_key  ${base_directory}/${sources_for_run_catalog}/{*,.[!.]*}  ${remote_username}@${remote_ip}:${fast_io_catalog}/${sources_for_run_catalog}


          # CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
       if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ | grep -c .$suf) != 0 ]]
       then

          make_call_string="make  $make_options  PROG=$program_name  F90=$compiler_name  COPT=\"$cpp_options\"  F90FLAGS=\"$compiler_options\"  LDFLAGS=\"$linker_options\" "
          [[ "$login_init_cmd" != "" ]]   &&  login_init_cmd=${login_init_cmd}";"
          [[ "$module_commands" != "" ]]  &&  module_commands=${module_commands}";"
          if [[ $silent = false ]]
          then
             echo "  *** execute \"make\" on remote host"
          fi
          ssh  -q  $ssh_key  ${remote_username}@${remote_ip}  "$login_init_cmd $module_commands cd ${fast_io_catalog}/${sources_for_run_catalog}; echo $make_call_string > LAST_MAKE_CALL; chmod u+x LAST_MAKE_CALL; $make_call_string; [[ \$? != 0 ]] && echo MAKE_ERROR"  2>&1 | tee ${configuration_identifier}_last_make_protocol

          if [[ $(grep -c MAKE_ERROR ${configuration_identifier}_last_make_protocol) != 0 ]]
          then
             printf "\a\n  +++ error(s) occurred during compiling or linking for host configuration \"$configuration_identifier\" "
             if [[ $silent = false ]]
             then
                answer=dummy
                printf "\n"
                while [[ "$answer" != c  &&  "$answer" != k ]]
                do
                   printf "  >>> continue / list errors / kill palmbuild (c/l/k) ? "
                   read  answer
                   if [[ "$answer" = l ]]
                   then
                      more ${configuration_identifier}_last_make_protocol
                   fi
                done
                if [[ $answer = k ]]
                then
                   ssh  -q  $ssh_key  ${remote_username}@${remote_ip}  "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}"  2>&1
                   locat=user_abort; exit
                fi
             else
                   # ABORT ANYWAY
                ssh  -q  $ssh_key  ${remote_username}@${remote_ip}  "rm -rf ${fast_io_catalog}/${sources_for_run_catalog}"  2>&1
                locat=user_abort; exit
             fi
          fi

       else

          echo "  *** nothing to compile for this run"

       fi

    fi

    rm -rf  ${source_path}/${configuration_identifier}_last_make_protocol


    # MAKE ON LOCAL HOST
 else


       # NEXT IS THE BRANCH FOR CREATING THE MAKE_DEPOSITORY_... ON THE
       # LOCAL HOST
    if [[ "$run_identifier" = "" ]]
    then

          # SET THE ENVIRONMENT (EXECUTE INIT AND MODULE COMMANDS)
       if [[ "$login_init_cmd" != "" ]]
       then
          eval $login_init_cmd
       fi

       if [[ "$module_commands" != "" ]]
       then
          eval $module_commands || {
            printf "\n  +++ Module command(s) failed."
            printf "\n      Check the above output of the command(s)."
            locat=module_command_error; exit
          }
       fi

          # next is required to evaluate environment variables or commands used in the linker option
       eval linker_options=\"$linker_options\"

          # CREATE MAKE-DEPOSITORY, IF IT DOES NOT EXIST
       eval make_depository=$make_depository
       if [[ ! -d $make_depository ]]
       then
          if  mkdir -p $make_depository
          then
             if [[ $silent = false ]]
             then
                printf "\n\n  *** directory for local make depository:"
                printf "\n           $make_depository"
                printf "\n      was created\n"
             fi
          else
             printf "\n  +++ directory for local make depository:"
             printf "\n           $make_depository"
             printf "\n      cannot be created"
             locat=local_depository; exit
          fi
       fi

          # COPY SOURCE-CODE FROM REPOSITORY TO MAKE-DEPOSITORY
       if [[ $silent = false ]]
       then
          echo " "
          echo "  *** untar current source sources on local host in"
          echo "      $make_depository"
       fi
       cd  $make_depository
       cp  $source_path/${program_name}_sources.tar  .
       tar xf  ${program_name}_sources.tar


          # FIRST CREATE EXECUTABLES FOR THE UTILITY ROUTINES
       if [[ $silent = false ]]
       then
          echo " "
          echo "  *** creating utilities on local host"
       fi
       make  -f Makefile_utilities  $make_options  F90=$compiler_name  F90_SER=$compiler_name_ser  COPT="$cpp_options"  F90FLAGS="$compiler_options"  LDFLAGS="$linker_options" | tee ${configuration_identifier}_last_make_protocol

       if [[ ${PIPESTATUS[0]} != 0 ]]
       then
          printf "\a\n  +++ error(s) occurred during compiling of the utilities for host configuration \"$configuration_identifier\" "
          if [[ $silent = false ]]
          then
             answer=dummy
             printf "\n"
             while [[ "$answer" != c  &&  "$answer" != k ]]
             do
                printf "  >>> continue / list errors / kill palmbuild (c/l/k) ? "
                read  answer
                if [[ "$answer" = l ]]
                then
                   more ${configuration_identifier}_last_make_protocol
                fi
             done
             if [[ $answer = k ]]
             then
                locat=user_abort; exit
             fi
          else
             # ABORT ANYWAY
             locat=user_abort; exit
          fi
       else
          cp agent_preprocessing $source_path/../SCRIPTS/.
          cp inifor $source_path/../SCRIPTS/.
       fi


          # CALL MAKE ON LOCAL HOST USING THE  OPTIONS DETERMINED FURTHER ABOVE
       if [[ $silent = false ]]
       then
          echo " "
          echo "  *** compile PALM sources on local host"
       fi

       make  $make_options  PROG=$program_name  F90=$compiler_name  COPT="$cpp_options"  F90FLAGS="$compiler_options"  LDFLAGS="$linker_options"  2>&1 | tee ${configuration_identifier}_last_make_protocol

       if [[ ${PIPESTATUS[0]} != 0 ]]
       then
          printf "\a\n  +++ error(s) occurred during compiling or linking for host configuration \"$configuration_identifier\" "
          if [[ $silent = false ]]
          then
             answer=dummy
             printf "\n"
             while [[ "$answer" != c  &&  "$answer" != k ]]
             do
                printf "  >>> continue / list errors / kill palmbuild (c/l/k) ? "
                read  answer
                if [[ "$answer" = l ]]
                then
                   more ${configuration_identifier}_last_make_protocol
                fi
             done
             if [[ $answer = k ]]
             then
                locat=user_abort; exit
             fi
          else
                # ABORT ANYWAY
             locat=user_abort; exit
          fi
       fi


          # TAR NEW VERSION ON LOCAL HOST
       if [[ $silent = false ]]
       then
          printf "\n  *** tar update on local host ..."
       fi
       tar -cf  ${program_name}_current_version.tar  ${program_name} *.$suf *.o *.mod *.x

    else

          # NOW COMES THE BRANCH FOR CREATING THE EXECUTABLE FOR THE CURRENT RUN
          # INCLUDING E.G. USER-INTERFACE ROUTINES. ALSO ADD OTHER UTILITY EXECUTABLES. EVERYTHING IS
          # COLLECTED IN DIRECTORY SOURCES_FOR_RUN_...

          # FIRST CHECK, IF COMPILED SOURCES FOR THIS RUN IDENTIFIER EXISTS
          # AND ASK, IF THEY SHALL BE USED
       if [[ -d ${fast_io_catalog}/${sources_for_run_catalog}  &&  $use_existing_sources_folder = true ]]
       then
          printf "\a\n  *** compiled sources for run \"$run_identifier\" found on local host in folder"
          printf "\n      ${fast_io_catalog}/${sources_for_run_catalog}"
          printf "\n      will be used!"
          exit
       fi

          # SECOND CHECK, IF A DEPOSITORY EXISTS ON THE LOCAL MACHINE
       if [[ ! -d ${make_depository} ]]
       then
          printf "\n  +++ directory for local make depository:"
          printf "\n           $make_depository"
          printf "\n      not found. Please run \"palmbuild -c $configuration_identifier\" "
          locat=make_depository; exit
       fi


          # COPY MAKE DEPOSITORY ON LOCAL MACHINE TO SOURCES_FOR_RUN_...
       if [[ $silent = false ]]
       then
          printf "\n  *** copy MAKE_DEPOSITORY_${configuration_identifier} on local host to "
          printf "\n      ${fast_io_catalog}/${sources_for_run_catalog} \n"
       fi
       rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
       mkdir -p ${fast_io_catalog}/${sources_for_run_catalog}
       if [[ $? != 0 ]]
       then
          printf "\n  +++ SOURCES_FOR_RUN catalog cannot be created."
          printf "\n      Check setting of variable fast_io_catalog in your config file."
          locat=execution
          exit
       fi
       cp ${make_depository}/${program_name}_current_version.tar  ${fast_io_catalog}/${sources_for_run_catalog}
       cd $fast_io_catalog/${sources_for_run_catalog}
       tar xf ${program_name}_current_version.tar


          # COPY CONTENTS OF SOURCES_FOR_RUN_... TO SOURCES_FOR_RUN_...
          # IN THE FAST_IO_CATALOG ON THE LOCAL MACHINE
       if [[ $silent = false ]]
       then
          printf "\n  *** copy ${base_directory}/${sources_for_run_catalog} to"
          printf "\n      ${fast_io_catalog}/${sources_for_run_catalog} on local host \n"
       fi
       cp  ${base_directory}/${sources_for_run_catalog}/{*,.[!.]*}  ${fast_io_catalog}/${sources_for_run_catalog}


          # CREATE EXECUTABLE FROM THE NEW/MODIFIED SOURCE FILES, IF THERE ARE ANY
       if [[ $(ls -1 ${base_directory}/${sources_for_run_catalog}/ | grep -c .$suf) != 0 ]]
       then

          if [[ $silent = false ]]
          then
             echo "  *** execute \"make\" on local host"
          fi
          [[ "$login_init_cmd" != "" ]]   &&  eval $login_init_cmd
          [[ "$module_commands" != "" ]]  &&  {
             eval $module_commands || {
               printf "\n  +++ Module command(s) failed."
               printf "\n      Check the above output of the command(s)."
               locat=module_command_error; exit
             }
          }

             # next is required to evaluate environment variables or commands used in the linker option
          eval linker_options=\"$linker_options\"

          make  $make_options  PROG=$program_name  F90=$compiler_name  COPT="$cpp_options"  F90FLAGS="$compiler_options"  LDFLAGS="$linker_options"

          if [[ ${PIPESTATUS[0]} != 0 ]]
          then

             printf "\a\n  +++ error(s) occurred during compiling or linking for host configuration \"$configuration_identifier\" "
             if [[ $silent = false ]]
             then
                answer=dummy
                printf "\n"
                while [[ "$answer" != c  &&  "$answer" != k ]]
                do
                   printf "  >>> continue / kill palmbuild (c/k) ? "
                   read  answer
                done
                if [[ $answer = k ]]
                then
                   rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
                   locat=user_abort; exit
                fi
             else
                   # ABORT ANYWAY
                rm -rf ${fast_io_catalog}/${sources_for_run_catalog}
                locat=user_abort; exit
             fi
          fi

       else

          echo "  *** nothing to compile for this run"

       fi

    fi
 fi