Home

Context Navigation

source: palm/trunk/SCRIPTS/mrun @ 82

Last change on this file since 82 was 82, checked in by raasch, 18 years ago
vorlaeufige Standalone-Version fuer Linux-Cluster
Property svn:keywords set to `Rev`
File size: 142.9 KB

Line
1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121
122
123
124
125	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
126
127	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
128	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
129	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
130
131	AddFilenames=""
132	additional_conditions=""
133	add_source_path=""
134	afname=""
135	archive_save=true
136	archive_system=none
137	compiler_name=""
138	cond1=""
139	cond2=""
140	config_file=.mrun.config
141	cpp_opts=""
142	cpp_options=""
143	cpumax=0
144	cpurest=0
145	delete_temporary_catalog=true
146	do_batch=false
147	do_compile=true
148	do_remote=false
149	do_stagein=true
150	do_stageout=true
151	do_trace=false
152	email_notification=""
153	exclude=""
154	executable=""
155	execution_error=false
156	fimm=false
157	fname=test
158	fromhost=""
159	global_revision=""
160	host=""
161	host_file=""
162	hp=""
163	ignore_archive_error=false
164	input_list=""
165	interpreted_config_file=""
166	job_on_file=""
167	keep_data_from_previous_run=false
168	localhost_realname=$(hostname)
169	local_compile=false
170	locat=normal
171	mainprog=""
172	makefile=""
173	mc=$0
174	while [[ $(echo $mc \| grep -c "/") != 0 ]]
175	do
176	mc=`echo $mc \| cut -f2- -d"/"`
177	done
178	module_files=""
179	mrun_script_name=$mc
180	netcdf_inc=""
181	netcdf_lib=""
182	netcdf_support=false
183	node_usage=default
184	numprocs=""
185	OOPT=""
186	openmp=false
187	output_list=""
188	package_list=""
189	punkte="..........................................................."
190	queue=none
191	read_from_config=""
192	restart_run=false
193	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
194	if [[ $return_addres = 130.75.105.158 ]]
195	then
196	return_addres=172.20.25.41
197	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
198	fi
199	# if [[ $return_addres = 210.117.65.1 ]]
200	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
201	# then
202	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
203	# fi
204	return_password=""
205	return_username=$LOGNAME
206	remotecall=false
207	remote_username=""
208	run_mode=""
209	scirocco=false
210	store_on_archive_system=true
211	striche=" ----------------------------------------------------------------------------"
212	silent=false
213	source_list=""
214	source_path=SOURCE
215	tasks_per_node=""
216	threads_per_task=1
217	tmpcreate=false
218	tmp_data_catalog=""
219	transfer_problems=false
220	usern=$LOGNAME
221	working_directory=`pwd`
222	TOPT=""
223	XOPT=""
224	zeit=$( date \| cut -c 12-19 )
225
226	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
227	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
228
229	typeset -R30 calltime
230	typeset -L20 spalte1
231	typeset -L40 spalte2
232	typeset -L60 spalte3
233	typeset -L35 string1=`date`
234	typeset -L12 string2=$usern
235	typeset -L12 string3=$localhost_realname
236	typeset -L12 string4
237	typeset -L12 string5
238	typeset -L30 version="MRUN 2.0 Rev$Rev: 82 $"
239
240
241
242	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
243	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
244
245	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
246	# EXPORTIERT WERDEN
247	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
248	export input_list memory numprocs output_list queue run_mode
249
250
251
252	# FEHLERBEHANDLUNG
253	# BEI EXIT:
254	trap 'rm -rf tmp_mrun
255	if [[ $locat != localhost ]]
256	then
257	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
258	# then
259	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
260	#MRUN-calls on $localhost
261	#
262	#date and time user localhost remotehost termination mrun-command
263	#--------------------------------------------------------------------------------------------------------------------
264	#%STATEND%
265	# chmod 666 ${mrun_path}/statistik/mrun_statistik
266	# fi
267	#
268	# # EINTRAG IN DIE STATISTIK-DATEI
269	# string4=$host
270	# string5=$locat
271	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
272	# then
273	# if [[ $do_batch = true ]]
274	# then
275	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
276	# else
277	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
278	# fi
279	# fi
280	echo " " > /dev/null
281	fi
282
283	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
284	then
285
286	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
287	(( i = 0 ))
288	while (( i < iec ))
289	do
290	(( i = i + 1 ))
291	printf "\n *** Execution of ERROR-command:\n"
292	printf " >>> ${err_command[$i]}\n"
293	eval ${err_command[$i]}
294	done
295	if [[ -n $interpreted_config_file ]] then
296	rm -rf $interpreted_config_file
297	fi
298	if [[ -n .mrun_environment ]] then
299	rm -rf .mrun_environment
300	fi
301	if [[ $tmpcreate = true ]]
302	then
303	printf "\n *** Contents of \"$TEMPDIR\":\n"
304	ls -al; cd
305	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
306	fi
307	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
308	then
309	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
310	fi
311	printf "\n\n+++ MRUN killed \n\n"
312	elif [[ $locat != control_c ]]
313	then
314	printf "\n\n --> all actions finished\n\n"
315	printf " Bye, bye $usern !!\n\n"
316	fi' exit
317
318
319	# BEI TERMINAL-BREAK:
320	trap 'rm -rf tmp_mrun
321	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
322	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
323	then
324	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
325	fi
326	printf "\n+++ MRUN killed by \"^C\" \n\n"
327	locat=control_c
328	exit
329	' 2
330
331
332	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
333	# BEEN SET
334	if [[ "$PALM_BIN" = "" ]]
335	then
336	printf "\n +++ environment variable PALM_BIN has not been set"
337	printf "\n please set it to the directory where the PALM scripts are located"
338	locat=palm_bin; exit
339	fi
340
341
342
343	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
344	# FUER FOLGEJOBS BENOETIGT WIRD
345	while getopts :a:AbBc:Cd:D:FG:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
346	do
347	case $option in
348	(a) afname=$OPTARG;;
349	(A) store_on_archive_system=false; mc="$mc -A";;
350	(b) do_batch=true; mc="$mc -b";;
351	(B) delete_temporary_catalog=false; mc="$mc -B";;
352	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
353	(C) restart_run=true; mc="$mc -C";;
354	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
355	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
356	(F) job_on_file="-D"; mc="$mc -F";;
357	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
358	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
359	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
360	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
361	(I) ignore_archive_error=true; mc="$mc -I";;
362	(k) keep_data_from_previous_run=true; mc="$mc -k";;
363	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
364	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
365	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
366	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
367	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
368	(O) use_openmp=true; mc="$mc -O";;
369	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
370	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
371	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
372	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
373	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
374	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
375	(S) read_from_config=false; mc="$mc -S";;
376	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
377	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
378	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
379	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
380	(v) silent=true; mc="$mc -v";;
381	(x) do_trace=true;set -x; mc="$mc -x";;
382	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
383	(\?) printf "\n +++ unknown option $OPTARG \n"
384	printf "\n --> type \"$0 ?\" for available options \n"
385	locat=parameter;exit;;
386	esac
387	done
388
389
390	# EVTL. POSITIONSPARAMETER EINLESEN
391	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
392	shift OPTIND-1
393
394
395	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
396	if [[ "$1" = "?" ]]
397	then
398	(printf "\n *** mrun can be called as follows:\n"
399	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
400	printf "\n Description of available options:\n"
401	printf "\n Option Description Default-Value"
402	printf "\n -a base name of input files equiv. -d"
403	printf "\n -A no archiving when using file-attribute fl"
404	printf "\n -b batch-job on local machine ---"
405	printf "\n -B do not delete temporary directory at end ---"
406	printf "\n -c configuration file .mrun.config"
407	printf "\n -d base name of files attached to program test"
408	printf "\n -D preprocessor(cpp)-directives \"\" "
409	printf "\n -F create remote job file only ---"
410	printf "\n -h execution host $localhost_realname"
411	printf "\n -i INPUT control list \"\" "
412	printf "\n -I archiving errors of previous batch-jobs"
413	printf "\n will be ignored"
414	printf "\n -k keep data from previous run"
415	printf "\n -K additional conditions for controling"
416	printf "\n usage of conditional code and"
417	printf "\n env-variables in configuration file \"\" "
418	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
419	printf "\n -M Makefile name Makefile"
420	printf "\n -n node usage (shared/not_shared) depending on -h"
421	printf "\n -o OUTPUT control list \"\" "
422	printf "\n -O use OpenMP ---"
423	printf "\n -p software package list \"\" "
424	printf "\n -q queue \"$queue\" "
425	printf "\n -r run control list (combines -i -o) \"\" "
426	printf "\n -s filenames of routines to be compiled \"\" "
427	printf "\n must end with .f, .f90, .F, or .c !"
428	printf "\n use \"..\" for more than one file and wildcards"
429	printf "\n -s TEST compiles all files with w-permit"
430	printf "\n -S config file interpreted by shellscript ---"
431	printf "\n -t allowed cpu-time in seconds (batch) 0"
432	printf "\n -T tasks per node depending on -h"
433	printf "\n -u username on remote machine \"\" "
434	printf "\n -v no prompt for confirmation ---"
435	printf "\n -x tracing of mrun for debug purposes ---"
436	printf "\n -X # of processors (on parallel machines) 1"
437	printf "\n "
438	printf "\n Possible values of positional parameter <modus>:"
439	printf "\n \"?\" - this outline \n\n") \| more
440	exit
441	elif [[ "$1" != "" ]]
442	then
443	printf "\n +++ positional parameter $1 unknown \n"
444	locat=parameter; exit
445	fi
446
447
448
449	# KURZE STARTMELDUNG
450	printf "\n*** $version "
451	printf "\n will be executed. Please wait ..."
452
453
454
455	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
456	if [[ ! -f $config_file ]]
457	then
458	printf "\n\n +++ configuration file: "
459	printf "\n $config_file"
460	printf "\n does not exist"
461	locat=connect; exit
462	fi
463
464
465	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
466	line=""
467	grep "%host_identifier" $config_file > tmp_mrun
468	while read line
469	do
470	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
471	then
472	HOSTNAME=`echo $line \| cut -d" " -s -f2`
473	host_identifier=`echo $line \| cut -d" " -s -f3`
474	if [[ "$HOSTNAME" = $localhost_realname ]]
475	then
476	localhost=$host_identifier
477	break
478	fi
479	fi
480	done < tmp_mrun
481
482	if [[ "$localhost" = "" ]]
483	then
484	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
485	printf "\n for local host \"$localhost_realname\"."
486	printf "\n Please add line"
487	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
488	printf "\n to the configuration file."
489	locat=localhost; exit
490	fi
491
492
493
494	# HOSTSPEZIFISCHE VARIABLEN SETZEN
495	case $localhost_realname in
496	(breg-en0\|berni-en0) archive_system=tivoli;;
497	(cs*) archive_system=ut;;
498	(fimm.bccs.uib.no) fimm=true;;
499	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
500	(hreg-en0\|hanni-en0) archive_system=tivoli;;
501	(scirocco) scirocco=true;;
502	esac
503
504
505
506	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
507	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
508	[[ "$afname" = "" ]] && afname=$fname
509
510
511	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
512	if [[ "$run_mode" != "" ]]
513	then
514	input_list="$input_list $run_mode"
515	output_list="$output_list $run_mode"
516	fi
517
518
519	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
520	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
521	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
522	# STARTET)
523	if [[ "$fromhost" = "" ]]
524	then
525	fromhost=$localhost
526	fi
527
528
529	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
530	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
531	then
532	source_list=TEST
533	local_compile=true
534	host=$localhost
535	fi
536
537
538	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
539	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
540	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
541	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
542	if [[ -n $host && "$host" != $localhost ]]
543	then
544	do_batch=true
545	do_remote=true
546	case $host in
547	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
548	(*) printf "\n"
549	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
550	printf "\n or NQS not available on execution host!"
551	locat=nqs; (( iec = 0 )); exit;;
552	esac
553	else
554	host=$localhost
555	fi
556
557
558	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
559	if [[ -n $additional_conditions ]]
560	then
561	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
562	cond1=`echo $additional_conditions \| cut -d" " -f1`
563	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
564	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
565	if [[ -n $dummy ]]
566	then
567	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
568	locat=options; exit
569	fi
570	fi
571
572
573	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
574	# ARCHIVIERUNG FEHLGESCHLAGEN IST
575	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
576	then
577	if [[ $ignore_archive_error = false ]]
578	then
579	printf "\n +++ data archiving of previous run failed"
580	printf "\n see directory \~/job_queue on remote machine"
581	locat=archive; exit
582	else
583	printf "\n +++ warning: data archiving in a previous run failed"
584	printf "\n MRUN continues, trying to get backup copy"
585	fi
586	fi
587
588
589
590	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
591	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
592	if [[ "$read_from_config" = false ]]
593	then
594
595	[[ $silent = false ]] && printf "\n Reading the configuration file... "
596	while read zeile
597	do
598	[[ $silent = false ]] && printf "."
599
600
601	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
602	# ERSETZEN
603	eval zeile=\"$zeile\"
604
605
606	# INTERPRETATION DER ZEILE
607	if [[ "$(echo $zeile)" = "" ]]
608	then
609	# LEERZEILE, KEINE AKTION
610	continue
611
612	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
613	then
614
615	# ZEILE IST KOMMENTARZEILE
616	true
617
618	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
619	then
620
621	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
622	zeile=$(echo $zeile \| cut -c2-)
623	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
624	var=`echo $zeile \| cut -d" " -f1`
625	value=`echo $zeile \| cut -d" " -s -f2`
626	for_host=`echo $zeile \| cut -d" " -s -f3`
627	for_cond1=`echo $zeile \| cut -d" " -s -f4`
628	for_cond2=`echo $zeile \| cut -d" " -s -f5`
629
630	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
631	then
632
633	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
634	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
635	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
636
637
638	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
639	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
640	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
641	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
642	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
643	# KONFIGURATIONSDATEI
644	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
645	then
646	eval $var=\$value
647
648	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
649	if [[ $do_trace = true ]]
650	then
651	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
652	fi
653	fi
654
655	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
656	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
657	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
658	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
659	if [[ $var = host ]]
660	then
661	if [[ -n $host && "$host" != $localhost ]]
662	then
663	do_batch=true
664	do_remote=true
665	case $host in
666	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
667	(*) printf "\n +++ no queueing system available on execution host \"$host\""
668	locat=nqs; exit;;
669	esac
670	else
671	host=$localhost
672	fi
673	fi
674
675	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
676	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
677	# DEN PROGRAMMEN BENOETIGT WERDEN
678	export $var
679	fi
680
681
682
683
684	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
685	then
686
687	# ZEILE DEFINIERT ERROR-KOMMANDO
688	(( iec = iec + 1 ))
689	zeile=$(echo $zeile \| cut -c4-)
690	err_command[$iec]="$zeile"
691
692	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
693	then
694
695	# ZEILE DEFINIERT INPUT-KOMMANDO
696	(( iic = iic + 1 ))
697	zeile=$(echo $zeile \| cut -c4-)
698	in_command[$iic]="$zeile"
699
700	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
701	then
702
703	# ZEILE DEFINIERT OUTPUT-KOMMANDO
704	(( ioc = ioc + 1 ))
705	zeile=$(echo $zeile \| cut -c4-)
706	out_command[$ioc]="$zeile"
707
708	else
709
710	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
711	# s2a: in/out - Feld
712	# s2b: loc - Feld (optional)
713	# s2c: tr/ar - Feld (optional)
714	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
715	s1=`echo $zeile \| cut -d" " -f1`
716	s2=`echo $zeile \| cut -d" " -s -f2`
717	s2a=$(echo $s2 \| cut -d":" -f1)
718	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
719	then
720	s2b=""
721	s2c=""
722	else
723	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
724	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
725	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
726	fi
727	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
728	s3=`echo $zeile \| cut -d" " -f3`
729	s4=`echo $zeile \| cut -d" " -s -f4`
730	s5=`echo $zeile \| cut -d" " -s -f5`
731	s6=`echo $zeile \| cut -d" " -s -f6`
732
733
734	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
735	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
736	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
737	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
738	# HANDEN SEIN MUSS (D.H. s2b = loc)
739	IFSALT="$IFS"; IFS="$IFS:"
740	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
741	then
742	found=false
743	for actual in $input_list
744	do
745	for formal in $s3
746	do
747	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
748	done
749	done
750	if [[ $found = true ]]
751	then
752	(( iin = iin + 1 ))
753	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
754	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
755	extin[$iin]=$s6
756	fi
757	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
758	then
759	found=false
760	for actual in $output_list
761	do
762	for formal in $s3
763	do
764	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
765	done
766	done
767	if [[ $found = true ]]
768	then
769	(( iout = iout + 1 ))
770	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
771	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
772	fi
773	elif [[ "$s2a" != in && "$s2a" != out ]]
774	then
775	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
776	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
777	locat=connect; exit
778	fi
779	IFS="$IFSALT"
780	fi
781	done < $config_file
782
783	else
784
785
786	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
787	[[ $silent = false ]] && printf "..."
788	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
789	export interpreted_config_file=.icf.$RANDOM
790
791	# case $localhost_realname in
792	# (caurus\|twister) interpret_config.hp;;
793	# (bora\|breva\|elephanta\|gallego\|gregale\|hababai\|maestro\|orkan\|ostria) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel_ifc/8.1/lib/; interpret_config_9.x;;
794	# (levanto\|vorias) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel/ifort/9.1.037/lib/; interpret_config_9.x_levanto;;
795	# (quanero) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel_fc_80/lib; interpret_config_9.x;;
796	# (*) interpret_config.x;;
797	# esac
798
799
800	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
801	# VERFUEGUNG STELLEN
802	cat > .mrun_environment << %%END%%
803	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
804	config_file = '$config_file', do_remote = '$do_remote',
805	do_trace = '$do_trace', host = '$host',
806	input_list = '$input_list', icf = '$interpreted_config_file',
807	localhost = '$localhost', output_list = '$output_list' /
808
809	%%END%%
810
811	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
812	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
813	mrun_memory=$memory
814	mrun_cpumax=$cpumax
815	mrun_numprocs=$numprocs
816
817	if [[ $localhost_realname = "gate" ]]
818	then
819	interpret_config_gate.x
820	else
821	interpret_config.x
822	fi
823	rm .mrun_environment
824
825
826	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
827	chmod u+x $interpreted_config_file
828	export PATH=$PATH:.
829	. $interpreted_config_file
830	rm $interpreted_config_file
831
832
833	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
834	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
835	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
836	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
837
838	fi
839
840
841	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
842	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
843	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
844	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
845	if [[ "$SOURCES_COMPLETE" = "" ]]
846	then
847
848	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
849	# VEREINBART WURDE
850	source_path=""
851	line=""
852	grep "%source_path" $config_file > tmp_mrun
853	while read line
854	do
855	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
856	then
857	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
858	then
859	global_source_path=`echo $line \| cut -d" " -f2`
860	fi
861	fi
862	done < tmp_mrun
863
864	line=""
865	found=false
866	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
867	while read line
868	do
869	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
870	then
871	if [[ $found = true ]]
872	then
873	printf "\n\n +++ more than one source path found in configuration file"
874	printf "\n for local host \"$localhost\" "
875	locat=source_path; exit
876	fi
877	source_path=`echo $line \| cut -d" " -f2`
878	found=true
879	fi
880	done < tmp_mrun
881	rm tmp_mrun
882
883	if [[ "$source_path" = "" ]]
884	then
885	if [[ "$global_source_path" != "" ]]
886	then
887	source_path=$global_source_path
888	else
889	printf "\n\n +++ no source path found in configuration file"
890	printf "\n for local host \"$localhost\" "
891	locat=source_path; exit
892	fi
893	fi
894	eval source_path=$source_path
895
896	if [[ ! -d $source_path ]]
897	then
898	printf "\n\n +++ source path \"$source_path\" on local host"
899	printf "\n \"$localhost\" does not exist"
900	locat=source_path; exit
901	fi
902
903	fi
904
905
906	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
907	# DURCH OPTION -G MITGETEILT)
908	if [[ "$global_revision" = "" ]]
909	then
910	global_revision=`svnversion $source_path 2>/dev/null`
911	global_revision="Rev: $global_revision"
912	fi
913
914
915	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
916	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
917	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
918	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
919	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
920	if [[ -n $host && "$host" != $localhost ]]
921	then
922	do_batch=true
923	do_remote=true
924	case $host in
925	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
926	(*) printf "\n"
927	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
928	printf "\n or no queueing system available on execution host!"
929	locat=nqs; (( iec = 0 )); exit;;
930	esac
931	else
932	host=$localhost
933	fi
934
935
936	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
937	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
938	then
939
940	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
941	if [[ ! -n $numprocs ]]
942	then
943	printf "\n"
944	printf "\n +++ option \"-K parallel\" requires additional specification"
945	printf "\n of the number of processors to be used by"
946	printf "\n mrun-option \"-X\" or by environment-variable"
947	printf "\n \"numprocs\" in the configuration file"
948	locat=numprocs; (( iec = 0 )); exit
949	fi
950
951	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
952	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
953	# GESAMTPROZESSORANZAHL IST
954	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
955	then
956	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
957	(( ival = $tasks_per_node ))
958	(( pes = numprocs ))
959	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
960	# then
961	# (( pes = pes - 1 ))
962	# fi
963	(( ii = pes / ival ))
964	if (( pes - ii * ival > 0 ))
965	then
966	printf "\n"
967	printf "\n +++ tasks per node (option \"-T\") must be an integral"
968	printf "\n divisor of the total number of processors (option \"-X\")"
969	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
970	locat=tasks_per_node; (( iec = 0 )); exit
971	fi
972	fi
973
974	# IBMY HAT NUR EINEN KNOTEN
975	if [[ $host = ibmy ]]
976	then
977	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
978	then
979	printf "\n"
980	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
981	printf "\n total number of processors (option \"-X\")"
982	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
983	locat=tasks_per_node; (( iec = 0 )); exit
984	fi
985	fi
986
987	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
988	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
989	if [[ $use_openmp = true ]]
990	then
991	threads_per_task=$tasks_per_node
992	tasks_per_node=1
993	fi
994	OOPT="-O $threads_per_task"
995	TOPT="-T $tasks_per_node"
996
997	# GESAMTZAHL DER KNOTEN BESTIMMEN
998	if [[ "$tasks_per_node" != "" ]]
999	then
1000	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1001	fi
1002
1003	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1004	# SETZEN
1005	if [[ $node_usage = default ]]
1006	then
1007	if [[ $host = ibms ]]
1008	then
1009	node_usage=shared
1010	else
1011	node_usage=not_shared
1012	fi
1013	fi
1014	if [[ $node_usage != shared && $node_usage != not_shared ]]
1015	then
1016	printf "\n"
1017	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1018	printf "\n \"shared\" or \"not_shared\""
1019	locat=tasks_per_node; (( iec = 0 )); exit
1020	fi
1021
1022	fi
1023
1024	# PRUEFEN, OB HOSTFILE EXISTIERT
1025	if [[ -n $hostfile ]]
1026	then
1027	if [[ ! -f $hostfile ]]
1028	then
1029	printf "\n"
1030	printf "\n +++ hostfile \"$hostfile\" does not exist"
1031	locat=hostfile; exit
1032	fi
1033	fi
1034
1035	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1036	if [[ $host = ibmy && $do_remote = false ]]
1037	then
1038	if [[ ! -f $HOME/.rhosts ]]
1039	then
1040	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1041	printf "\n\n *** file:"
1042	printf "\n $HOME/.rhosts"
1043	printf "\n was created\n"
1044	fi
1045	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1046	then
1047	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1048	printf "\n\n *** file:"
1049	printf "\n $HOME/.rhosts"
1050	printf "\n was extended by the name of the current host\n"
1051	fi
1052	fi
1053
1054
1055
1056	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1057	if [[ $queue = none ]]
1058	then
1059	case $host in
1060	(ibmb) if [[ $node_usage = shared ]]
1061	then
1062	queue=cshare
1063	else
1064	queue=csolo
1065	fi;;
1066	(ibmh) if [[ $node_usage = shared ]]
1067	then
1068	queue=cshare
1069	else
1070	queue=csolo
1071	fi;;
1072	(ibmy) queue=parallel;;
1073	(lctit) queue=default;;
1074	(nech) queue=none;;
1075	(neck) queue=P;;
1076	(unics) queue=unics;;
1077	esac
1078	fi
1079
1080
1081	# EVTL. NETCDF-UNTERSTUETZUNG SETZEN
1082	# case $host in
1083	# (decalpha) netcdf_support=true
1084	# netcdf_path=/usr/local/netcdf-3.5.1;;
1085	# (ibmb\|ibmh) netcdf_support=true
1086	# netcdf_path=/aws/dataformats/netcdf-3.6.0-p1/64-32;;
1087	# (ibms) netcdf_support=true
1088	# netcdf_path=/applic/lib/NETCDF64;;
1089	# (ibmy) netcdf_support=true
1090	# netcdf_path=/usr1/users/raasch/pub/netcdf-3.6.0-p1;;
1091	# (lcmuk) if [[ $scirocco = true ]]
1092	# then
1093	# netcdf_path=/opt/netcdf/3.6.2-beta4
1094	# elif [[ $fimm = true ]]
1095	# then
1096	# netcdf_path=/local/netcdf
1097	# else
1098	# netcdf_path=/muksoft/packages/netcdf/linux
1099	# fi;;
1100	# (lctit) netcdf_support=true
1101	# netcdf_path=/home2/usr5/mkanda/netcdf-3.6.2;;
1102	# (nech) netcdf_support=true
1103	# netcdf_path=/pool/SX-6/netcdf/netcdf-3.6.0-p1;;
1104	# (neck) netcdf_support=true
1105	# netcdf_path=/home/DSRC/NC/tatuyama/pub/netcdf-3.6.0-p1;;
1106	# esac
1107
1108
1109	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1110	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1111	# ERMITTELN
1112	(( i = 0 ))
1113	while (( i < iin ))
1114	do
1115	(( i = i + 1 ))
1116	(( maxcycle = 0 ))
1117
1118	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1119	if [[ "${actionin[$i]}" = di ]]
1120	then
1121	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1122	# REM-MASCHINE AUSWERTEN
1123	eval filename=${pathin[$i]}/${endin[$i]}
1124	else
1125	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1126	# REM-MASCHINE AUSWERTEN
1127	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1128	fi
1129
1130	# PRUEFEN AUF VORHANDENSEIN
1131	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1132	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1133	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1134	then
1135	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1136	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1137	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1138	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1139	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1140	if [[ "${transin[$i]}" != "locopt" ]]
1141	then
1142	printf "\n\n +++ INPUT-file: "
1143	if [[ "${extin[$i]}" = "" ]]
1144	then
1145	printf "\n $filename"
1146	else
1147	printf "\n $filename.${extin[$i]}"
1148	fi
1149	printf "\n does not exist\n"
1150	locat=input; exit
1151	else
1152	transin[$i]="unavailable"
1153	fi
1154	else
1155
1156	# ZYKLUSNUMMER FESTSTELLEN
1157	ls -1 -d $filename > filelist 2>/dev/null
1158	ls -1 -d $filename.* >> filelist 2>/dev/null
1159	while read zeile
1160	do
1161	cycle=$(print $zeile \| cut -f2 -d".")
1162	if [[ "$cycle" = "$zeile" ]]
1163	then
1164	(( icycle = 0 ))
1165	elif [[ "$cycle" = "${extin[$i]}" ]]
1166	then
1167	(( icycle = 0 ))
1168	else
1169	(( icycle = $cycle ))
1170	fi
1171	if (( icycle > maxcycle ))
1172	then
1173	(( maxcycle = icycle ))
1174	file_to_be_used=$zeile
1175	fi
1176	done <filelist
1177	rm filelist
1178
1179	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1180	if (( maxcycle > 0 ))
1181	then
1182	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1183	then
1184	filename=${filename}.$maxcycle.${extin[$i]}
1185	else
1186	filename=${filename}.$maxcycle
1187	fi
1188	else
1189	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1190	then
1191	filename=${filename}.${extin[$i]}
1192	fi
1193	fi
1194
1195	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1196	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1197	absnamein[$i]=$filename
1198	if (( maxcycle > 0 ))
1199	then
1200	if [[ "${actionin[$i]}" = di ]]
1201	then
1202	frelin[$i]=${endin[$i]}.$maxcycle
1203	else
1204	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1205	fi
1206	else
1207	if [[ "${actionin[$i]}" = di ]]
1208	then
1209	frelin[$i]=${endin[$i]}
1210	else
1211	frelin[$i]=${afname}${endin[$i]}
1212	fi
1213	fi
1214
1215	fi
1216	done
1217
1218
1219	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1220	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1221	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1222	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1223	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1224	(( i = 0 ))
1225	while (( i < iout ))
1226	do
1227	(( i = i + 1 ))
1228	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1229	then
1230	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1231	then
1232	actionout[$i]=""
1233	elif [[ "${actionout[$i]}" = tra ]]
1234	then
1235	actionout[$i]=a
1236	fi
1237	(( maxcycle = 0 ))
1238	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1239	eval catalogname=${pathout[$i]}
1240	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1241	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1242	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1243	then
1244
1245	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1246	if cat /dev/null > $filename
1247	then
1248	rm $filename
1249	else
1250
1251	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1252	if [[ ! -d $catalogname ]]
1253	then
1254	if mkdir -p $catalogname
1255	then
1256	printf "\n\n *** directory:"
1257	printf "\n $catalogname"
1258	printf "\n was created\n"
1259	else
1260	printf "\n\n +++ OUTPUT-file:"
1261	printf "\n $filename"
1262	printf "\n cannot be created, because directory does not exist"
1263	printf "\n and cannot be created either"
1264	printf "\n"
1265	locat=output ; exit
1266	fi 2>/dev/null
1267	else
1268	printf "\n\n +++ OUTPUT-file:"
1269	printf "\n $filename"
1270	printf "\n cannot be created, although directory exists"
1271	printf "\n"
1272	locat=output ; exit
1273	fi
1274	fi 2>/dev/null
1275	else
1276
1277	# ZYKLUSNUMMER FESTSTELLEN
1278	ls -1 -d $filename > filelist 2>/dev/null
1279	ls -1 -d $filename.* >> filelist 2>/dev/null
1280	while read zeile
1281	do
1282	cycle=$(print $zeile \| cut -f2 -d".")
1283	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1284	then
1285	(( icycle = 1 ))
1286	else
1287	(( icycle = $cycle + 1 ))
1288	fi
1289	if (( icycle > maxcycle ))
1290	then
1291	(( maxcycle = icycle ))
1292	fi
1293	done <filelist
1294	rm filelist
1295	fi
1296
1297	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1298	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1299	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1300	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1301	if [[ "${actionout[$i]}" != a ]]
1302	then
1303	if (( maxcycle > 0 ))
1304	then
1305	filename=${filename}.$maxcycle
1306	if cat /dev/null > $filename
1307	then
1308	rm $filename
1309	else
1310	printf "\n +++ OUTPUT-file:"
1311	printf "\n $filename"
1312	printf "\n cannot be created"
1313	locat=output ; exit
1314	fi
1315	fi
1316	else
1317	(( maxcycle = maxcycle - 1 ))
1318	if (( maxcycle > 0 ))
1319	then
1320	filename=${filename}.$maxcycle
1321	fi
1322	fi
1323
1324	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1325	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1326	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1327	pathout[$i]=$filename
1328	if (( maxcycle > 0 ))
1329	then
1330	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1331	else
1332	frelout[$i]=${fname}${endout[$i]}
1333	fi
1334
1335	fi
1336	done
1337
1338
1339	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1340	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1341	# UEBERSETZT ZU WERDEN)
1342	if [[ "$mainprog" = "" && "$executable" = "" ]]
1343	then
1344	printf "\n +++ neither main program nor executable defined"
1345	locat=source; exit
1346	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1347	then
1348	printf "\n +++ main program as well as executable defined"
1349	locat=source; exit
1350	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1351	then
1352	do_compile=false
1353	fi
1354
1355
1356	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1357	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1358	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1359	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1360	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1361	then
1362
1363	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1364	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1365
1366	if [[ $restart_run != true ]]
1367	then
1368	rm -rf SOURCES_FOR_RUN_$fname
1369	mkdir SOURCES_FOR_RUN_$fname
1370	fi
1371
1372
1373	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1374	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1375	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1376	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1377	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1378	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1379	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1380	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1381	# GESAMMELT
1382	if [[ "$source_list" = WRITE_PERMIT ]]
1383	then
1384
1385	source_list=""
1386	cd $source_path
1387
1388
1389	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1390	Names=$(ls -1 *.f90 2>&1)
1391	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1392	Names=$(ls -1 *.F90 2>&1)
1393	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1394	Names=$(ls -1 *.F 2>&1)
1395	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1396	Names=$(ls -1 *.f 2>&1)
1397	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1398	Names=$(ls -1 *.c 2>&1)
1399	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1400
1401
1402	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1403	for dateiname in $Filenames
1404	do
1405	if [[ -w $dateiname ]]
1406	then
1407	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1408	then
1409	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1410	source_list=$source_list"$dateiname "
1411	fi
1412	fi
1413	done
1414
1415	cd - > /dev/null
1416
1417
1418	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1419	then
1420
1421	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1422	source_list=""
1423	cd $source_path
1424
1425
1426	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1427	if [[ ! -d .svn ]]
1428	then
1429	printf "\n\n +++ source directory"
1430	printf "\n \"$source_path\" "
1431	printf "\n is not under control of \"subversion\"."
1432	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1433	fi
1434
1435
1436	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1437	Filenames=""
1438	svn status > tmp_mrun
1439	while read line
1440	do
1441	firstc=`echo $line \| cut -c1`
1442	if [[ $firstc = M \|\| $firstc = "?" ]]
1443	then
1444	Name=`echo "$line" \| cut -c8-`
1445	extension=`echo $Name \| cut -d. -f2`
1446	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1447	then
1448	Filenames="$Filenames "$Name
1449	fi
1450	fi
1451	done < tmp_mrun
1452
1453
1454	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1455	for dateiname in $Filenames
1456	do
1457	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1458	source_list=$source_list"$dateiname "
1459	done
1460
1461	cd - > /dev/null
1462
1463
1464	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1465	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1466	# VORHANDEN
1467	elif [[ "$source_list" != "" && $restart_run != true ]]
1468	then
1469
1470	cd $source_path
1471
1472	for filename in $source_list
1473	do
1474
1475	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1476	if [[ $(print $filename \| grep -c "/") != 0 ]]
1477	then
1478	printf "\n +++ source code file: $filename"
1479	printf "\n must not contain (\"/\") "
1480	locat=source; exit
1481	fi
1482
1483	if [[ ! -f $filename ]]
1484	then
1485	printf "\n +++ source code file: $filename"
1486	printf "\n does not exist"
1487	locat=source; exit
1488	else
1489	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1490	fi
1491
1492	done
1493
1494	cd - > /dev/null
1495
1496	fi
1497
1498
1499	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1500	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1501	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1502	if [[ $restart_run != true ]]
1503	then
1504
1505	if [[ ! -f "$source_path/$mainprog" ]]
1506	then
1507	printf "\n\n +++ main program: $mainprog"
1508	printf "\n does not exist in source directory"
1509	printf "\n \"$source_path\"\n"
1510	locat=source; exit
1511	else
1512	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1513	then
1514	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1515	source_list=${mainprog}" $source_list"
1516	fi
1517	fi
1518	fi
1519
1520
1521	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1522	if [[ $restart_run != true && "$add_source_path" != "" ]]
1523	then
1524
1525	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1526	if [[ ! -d $add_source_path ]]
1527	then
1528	printf "\n\n +++ WARNING: additional source code directory"
1529	printf "\n \"$add_source_path\" "
1530	printf "\n does not exist or is not a directory."
1531	printf "\n No source code will be used from this directory!\n"
1532	add_source_path=""
1533	sleep 3
1534	else
1535
1536	cd $add_source_path
1537
1538	Names=$(ls -1 *.f90 2>&1)
1539	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1540	Names=$(ls -1 *.F90 2>&1)
1541	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1542	Names=$(ls -1 *.F 2>&1)
1543	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1544	Names=$(ls -1 *.f 2>&1)
1545	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1546	Names=$(ls -1 *.c 2>&1)
1547	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1548
1549	cd - > /dev/null
1550	cd SOURCES_FOR_RUN_$fname
1551
1552	for dateiname in $AddFilenames
1553	do
1554	if [[ -f $dateiname ]]
1555	then
1556	printf "\n +++ source code file \"$dateiname\" found in additional"
1557	printf "\n source code directory \"$add_source_path\" "
1558	printf "\n as well as in directory \"$source_path\"."
1559	locat=source; exit
1560	fi
1561
1562	cp $add_source_path/$dateiname .
1563	source_list="$source_list $dateiname"
1564
1565	# Default User-Interface von der Liste entfernen, falls Datei
1566	# ein User-Interface enthaelt
1567	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1568	then
1569	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1570	then
1571	rm -rf user_interface.f90
1572	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1573	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1574	printf "\n since a user-interface is found in file"
1575	printf "\n \"$add_source_path/$dateiname\" \n"
1576	sleep 3
1577	else
1578	printf "\n\n *** user-interface file \"$dateiname\" "
1579	printf "\n added to the files to be translated \n"
1580	sleep 3
1581	fi
1582	fi
1583	done
1584
1585	cd - > /dev/null
1586	fi
1587	fi
1588
1589
1590	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1591	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1592	if [[ $restart_run != true && -n $package_list ]]
1593	then
1594
1595	cd $source_path
1596
1597	for package in $package_list
1598	do
1599
1600	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1601
1602	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1603	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1604	# LIEFERT
1605	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1606
1607
1608	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1609	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1610	for source_list_name in $package_source_list
1611	do
1612	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1613	then
1614
1615	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1616	ending=`echo $source_list_name \| cut -f2 -d.`
1617	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1618	then
1619	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1620	source_list="$source_list $source_list_name"
1621	fi
1622	fi
1623	done
1624	done
1625
1626	cd - > /dev/null
1627	fi
1628
1629
1630	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1631	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1632	if [[ "$restart_run" != true ]]
1633	then
1634	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1635	if [[ ! -f $makefile ]]
1636	then
1637	printf "\n +++ file \"$makefile\" does not exist"
1638	locat=make; exit
1639	else
1640	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1641	fi
1642	fi
1643
1644	fi # do_compile=true
1645
1646
1647	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1648	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1649	if [[ $do_compile = true ]]
1650	then
1651
1652	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1653	# ZUSAMMENSETZEN
1654	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1655	then
1656	cpp_options="${cpp_options},-D__ibm=__ibm"
1657	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1658	then
1659	cpp_options="$cpp_options -D__nec"
1660	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1661	then
1662	cpp_options="$cpp_options -D__lc"
1663	else
1664	cpp_options="$cpp_options -D__$localhost"
1665	fi
1666	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1667	then
1668	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1669	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1670	# if [[ $netcdf_support = true ]]
1671	# then
1672	# PPOPTS="$PPOPTS -Dnetcdf=netcdf"
1673	# [[ $localhost != ibms ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit=netcdf_64bit"
1674	# fi
1675	# if [[ $localhost = ibmy ]]
1676	# then
1677	# PPOPTS="$PPOPTS -Dibmy_special=ibmy_special"
1678	# fi
1679	else
1680	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1681	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1682	# if [[ $netcdf_support = true ]]
1683	# then
1684	# PPOPTS="$PPOPTS -Dnetcdf"
1685	# [[ $localhost != decalpha && $localhost != lctit ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit"
1686	# fi
1687	fi
1688	if [[ -n $package_list ]]
1689	then
1690	for package in $package_list
1691	do
1692	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1693	then
1694	if [[ $package != "dvrp_graphics+1PE" ]]
1695	then
1696	cpp_options="${cpp_options},-D__$package=__$package"
1697	else
1698	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1699	export use_seperate_pe_for_dvrp_output=true
1700	fi
1701	else
1702	if [[ $package != "dvrp_graphics+1PE" ]]
1703	then
1704	cpp_options="$cpp_options -D__$package"
1705	else
1706	cpp_options="$cpp_options -D__dvrp_graphics"
1707	export use_seperate_pe_for_dvrp_output=true
1708	fi
1709	fi
1710	done
1711	fi
1712	if [[ -n $cpp_opts ]]
1713	then
1714	for popts in $cpp_opts
1715	do
1716	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1717	then
1718	cpp_options="${cpp_options},-D__$popts=__$popts"
1719	else
1720	cpp_options="$cpp_options -D__$popts"
1721	fi
1722	done
1723	fi
1724
1725	# OPTION ZUM EINSCHALTEN DES PRAEPROZESSORS HINZUFUEGEN
1726	# if [[ $host = decalpha ]]
1727	# then
1728	# C_PPOPTS="-cpp -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION $PPOPTS"
1729	# elif [[ $(echo $host \| cut -c1-3) = ibm ]]
1730	# then
1731	# # blanks in PPOPTS muessen durch "," ersetzt werden
1732	# PPOPTS=`echo $PPOPTS \| sed 's/ -/,-/g'`
1733	# C_PPOPTS="-qsuffix=cpp=f90 -WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,$PPOPTS"
1734	# elif [[ $host = lcmuk ]]
1735	# then
1736	# C_PPOPTS="$PPOPTS -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1737	# elif [[ $host = lctit ]]
1738	# then
1739	# C_PPOPTS="$PPOPTS -Mpreprocess -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1740	# elif [[ $(echo $host \| cut -c1-3) = nec ]]
1741	# then
1742	# C_PPOPTS="-Ep -DMPI_REAL=MPI_REAL8 -DMPI_2REAL=MPI_2REAL8 -DSCFFT=dzfft -DCSFFT=zdfft $PPOPTS"
1743	# else
1744	# C_PPOPTS="$PPOPTS"
1745	# fi
1746
1747	else
1748
1749
1750	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1751	if [[ $do_remote = false ]]
1752	then
1753	if [[ ! -f $executable ]]
1754	then
1755	printf "\n +++ executable file: $executable"
1756	printf "\n does not exist"
1757	locat=executable; exit
1758	fi
1759	fi
1760	fi
1761
1762
1763	# JOBMODUS FESTSTELLEN
1764	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1765	then
1766	jobmo=BATCH
1767	else
1768	jobmo=INTERACTIVE
1769	fi
1770
1771
1772	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1773	# DURCH BENUTZER ANDERWEITIG VEREINBART
1774	if [[ "$compiler_name" = "" ]]
1775	then
1776
1777	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1778	locat=compiler_name; exit
1779
1780	# case $localhost in
1781	# (unics) compiler_name=f77;;
1782	# (lctit) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1783	# then
1784	# compiler_name=mpif90
1785	# echo ">>> compiler=mpif90"
1786	# else
1787	# compiler_name=pgf95
1788	# echo ">>> compiler=pgf95"
1789	# fi;;
1790	# (nech) compiler_name=sxmpif90;;
1791	# (decalpha) compiler_name=f95;;
1792	# (ibm\|ibmb\|ibmh\|ibms\|ibmy) compiler_name=mpxlf95_r;;
1793	# (*) printf "\n +++ unknown host name: $localhost \n";
1794	# locat=localhost; exit;;
1795	# esac
1796	fi
1797
1798
1799	# COMPILER AUF NECK UEBERSCHREIBEN
1800	[[ $localhost = neck ]] && compiler_name=mpif90
1801
1802
1803
1804	# PRAEPROZESSOR-PFAD BESTIMMEN
1805	case $localhost in
1806	(decalpha\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|unics) praeproc=cpp;;
1807	esac
1808
1809
1810	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1811	kennung=$RANDOM
1812	if [[ "$tmp_user_catalog" = "" ]]
1813	then
1814	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1815	then
1816	tmp_user_catalog=$TMPDIR
1817	elif [[ $localhost = nech ]]
1818	then
1819	tmp_user_catalog=$WRKSHR
1820	else
1821	tmp_user_catalog=/tmp
1822	fi
1823	fi
1824	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1825
1826
1827	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1828	# BESTIMMEN
1829	if [[ "$tmp_data_catalog" = "" ]]
1830	then
1831	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1832	then
1833	tmp_data_catalog=$WORK/mrun_restart_data
1834	elif [[ $localhost = nech ]]
1835	then
1836	tmp_data_catalog=$WRKSHR/mrun_restart_data
1837	else
1838	tmp_data_catalog=/tmp/mrun_restart_data
1839	fi
1840	fi
1841
1842
1843	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1844	# ERSETZEN
1845	if [[ $do_remote = false && $do_compile = true ]]
1846	then
1847	eval fopts=\"$fopts\"
1848	eval lopts=\"$lopts\"
1849	fi
1850
1851
1852
1853	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1854	fopts="$fopts $netcdf_inc $dvrp_inc"
1855	lopts="$lopts $netcdf_lib $dvrp_lib"
1856	ROPTS="$ropts"
1857	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
1858	then
1859	XOPT="-X $numprocs"
1860	fi
1861
1862
1863	# BEI VERWENDUNG VON DVRP-SOFTWARE MUSS ENTSPECHENDE GRAFIK-BIBLIOTHEK
1864	# MIT EINGEBUNDEN WERDEN
1865	# if [[ -n $package_list ]]
1866	# then
1867	# if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1868	# then
1869	#
1870	# # DVRP-GRAFIK GIBT ES NUR AUF DER IBM AM HLRN, AUF NECH/NECK UND
1871	# # DEM NOTEBOOK SCIROCCO
1872	# if [[ $host != ibmh && $host != nech && $host != neck && $host != lcmuk && "$local_compile" != true ]]
1873	# then
1874	# printf "\n"
1875	# printf "\n +++ option -p with package \"dvrp_graphics\" only allowed on nech and ibmh"
1876	# locat=parameter; exit
1877	# fi
1878	# if [[ $host = ibmh ]]
1879	# then
1880	# if [[ $cond1 = debug \|\| $cond2 = debug ]]
1881	# then
1882	# fopts="-I/home/h/hzazchmi/lib/debug $fopts"
1883	# lopts="$lopts -L/home/h/hzazchmi/lib/debug -lDVRP2 -lftp"
1884	# else
1885	# fopts="-I/home/h/nikevita/lib_stable/optimize $fopts"
1886	# lopts="$lopts -L/home/h/nikevita/lib_stable/optimize -lDVRP2 -lftp"
1887	# fi
1888	# elif [[ $host = nech ]]
1889	# then
1890	# fopts="-I/import/ds9b/ipf2/b/b323014/lib/optimize $fopts"
1891	# lopts="$lopts -L/import/ds9b/ipf2/b/b323014/lib/optimize -lDVRP2 -lftp"
1892	# elif [[ $host = neck ]]
1893	# then
1894	# fopts="-I/home/DSRC/NC/tatuyama/pub/dvrp $fopts"
1895	# lopts="$lopts -L/home/DSRC/NC/tatuyama/pub/dvrp -lDVRP2 -lftp"
1896	# elif [[ $host = lcmuk ]]
1897	# then
1898	# fopts="-I/usr/local/lib/dvrp/optimize $fopts"
1899	# lopts="$lopts -L/usr/local/lib/dvrp/optimize -lDVRP2 -lftp"
1900	# fi
1901	# fi
1902	# fi
1903
1904
1905	# EVTL. EINBINDEN DER NETCDF-BIBLIOTHEK
1906	# if [[ $netcdf_support = true ]]
1907	# then
1908	# case $host in
1909	# (decalpha) fopts="-I${netcdf_path}/include $fopts"
1910	# lopts="$lopts -L${netcdf_path}/lib -lnetcdf";;
1911	# (ibmb\|ibmh) fopts="-I ${netcdf_path}/include-64 $fopts"
1912	# lopts="$lopts -L${netcdf_path}/lib -lnetcdf";;
1913	# (ibms) fopts="-I /applic/netcdf64/src/f90 $fopts"
1914	# lopts="$lopts -L${netcdf_path} -lnetcdf";;
1915	# (ibmy) fopts="-I ${netcdf_path}/include $fopts"
1916	# lopts="$lopts -L${netcdf_path}/lib -lnetcdf";;
1917	# (nech\|neck) fopts="-I ${netcdf_path}/include $fopts"
1918	# lopts="$lopts -L${netcdf_path}/lib -lnetcdf";;
1919	# (lctit) fopts="-I ${netcdf_path}/include $fopts"
1920	# lopts="$lopts -L${netcdf_path}/lib -lnetcdf";;
1921	#
1922	# esac
1923	# fi
1924
1925	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1926	# GRAMM BENOETIGT
1927	done=false
1928	while [[ $done = false ]]
1929	do
1930	cputime=$cpumax
1931	if (( $cputime == 0 ))
1932	then
1933	printf "\n +++ cpu-time is undefined"
1934	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1935	printf "\n >>> "
1936	read cputime 1>/dev/null 2>&1
1937	else
1938	done=true
1939	fi
1940	cpumax=$cputime
1941	done
1942
1943	(( minuten = cputime / 60 ))
1944	(( sekunden = cputime - minuten * 60 ))
1945
1946
1947	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1948	if [[ $do_batch = true ]]
1949	then
1950	done=false
1951	while [[ $done = false ]]
1952	do
1953	if (( memory == 0 ))
1954	then
1955	printf "\n +++ memory demand is undefined"
1956	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1957	printf "\n >>> "
1958	read memory 1>/dev/null 2>&1
1959	else
1960	done=true
1961	fi
1962	done
1963	fi
1964
1965
1966	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1967	if [[ $do_remote = true && -z $remote_username ]]
1968	then
1969	while [[ -z $remote_username ]]
1970	do
1971	printf "\n +++ username on remote host \"$host\" is undefined"
1972	printf "\n >>> Please type username:"
1973	printf "\n >>> "
1974	read remote_username
1975	done
1976	mc="$mc -u$remote_username"
1977	fi
1978
1979	###########################################################################
1980	# HEADER-AUSGABE
1981	###########################################################################
1982
1983
1984	calltime=$(date)
1985	printf "\n"
1986	# [[ $silent = false ]] && clear
1987	printf "#--------------------------------------------------------------# \n"
1988	printf "\| $version$calltime \| \n"
1989	printf "\| \| \n"
1990	spalte1="called on:"; spalte2=$localhost_realname
1991	printf "\| $spalte1$spalte2 \| \n"
1992	if [[ $local_compile = false ]]
1993	then
1994	if [[ $do_remote = true ]]
1995	then
1996	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1997	else
1998	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1999	fi
2000	else
2001	spalte1="compiling test only!"; spalte2=""
2002	fi
2003	printf "\| $spalte1$spalte2 \| \n"
2004	if [[ -n $numprocs ]]
2005	then
2006	spalte1="number of PEs:"; spalte2=$numprocs
2007	printf "\| $spalte1$spalte2 \| \n"
2008	fi
2009	if [[ -n $tasks_per_node ]]
2010	then
2011	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
2012	printf "\| $spalte1$spalte2 \| \n"
2013	fi
2014	if [[ $threads_per_task != 1 ]]
2015	then
2016	spalte1="threads per task:"; spalte2="$threads_per_task"
2017	printf "\| $spalte1$spalte2 \| \n"
2018	fi
2019	printf "\| \| \n"
2020	if [[ $do_compile = true ]]
2021	then
2022	spalte1=cpp-directives:; spalte2=$cpp_options
2023	printf "\| $spalte1$spalte2 \| \n"
2024	zeile=$(echo "$cpp_options" \| cut -c41-)
2025	while [[ "$zeile" != "" ]]
2026	do
2027	spalte1=""
2028	spalte2=$zeile
2029	printf "\| $spalte1$spalte2 \| \n"
2030	zeile=$(echo "$zeile" \| cut -c41-)
2031	done
2032
2033	spalte1=compiler-options:; spalte2="$fopts"
2034	printf "\| $spalte1$spalte2 \| \n"
2035	zeile=$(echo "$fopts" \| cut -c41-)
2036	while [[ "$zeile" != "" ]]
2037	do
2038	spalte1=""
2039	spalte2=$zeile
2040	printf "\| $spalte1$spalte2 \| \n"
2041	zeile=$(echo "$zeile" \| cut -c41-)
2042	done
2043
2044	spalte1=linker-options:; spalte2=$lopts
2045	printf "\| $spalte1$spalte2 \| \n"
2046	zeile=$(echo "$lopts" \| cut -c41-)
2047	while [[ "$zeile" != "" ]]
2048	do
2049	spalte1=""
2050	spalte2=$zeile
2051	printf "\| $spalte1$spalte2 \| \n"
2052	zeile=$(echo "$zeile" \| cut -c41-)
2053	done
2054
2055	spalte1="main program":; spalte2=$mainprog
2056	printf "\| $spalte1$spalte2 \| \n"
2057	else
2058	spalte1=executable:; spalte2=$executable
2059	printf "\| $spalte1$spalte2 \| \n"
2060	fi
2061	printf "\| \| \n"
2062	spalte1="base name of files":; spalte2=$fname
2063	printf "\| $spalte1$spalte2 \| \n"
2064	if [[ $fname != $afname ]]
2065	then
2066	spalte1="base name of input files":; spalte2=$afname
2067	printf "\| $spalte1$spalte2 \| \n"
2068	fi
2069	spalte1="INPUT control list":; spalte2=$input_list
2070	printf "\| $spalte1$spalte2 \| \n"
2071	spalte1="OUTPUT control list":; spalte2=$output_list
2072	printf "\| $spalte1$spalte2 \| \n"
2073
2074	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2075	then
2076	spalte1="memory demand / PE":; spalte2="$memory MB"
2077	printf "\| $spalte1$spalte2 \| \n"
2078	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2079	printf "\| $spalte1$spalte2 \| \n"
2080	fi
2081
2082	if [[ $do_compile = true ]]
2083	then
2084	printf "\| \| \n"
2085	printf "\| Files to be compiled: \| \n"
2086	zeile=$source_list
2087	while [[ "$zeile" != "" ]]
2088	do
2089	spalte3=$zeile
2090	printf "\| $spalte3 \| \n"
2091	zeile=$(echo "$zeile" \| cut -c61-)
2092	done
2093	fi
2094	printf "#--------------------------------------------------------------#"
2095
2096
2097
2098	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2099	if [[ $do_trace = true ]]
2100	then
2101	(( i = 0 ))
2102	while (( i < iin ))
2103	do
2104	(( i = i + 1 ))
2105	if (( i == 1 ))
2106	then
2107	printf "\n\n >>> INPUT-file assignments:\n"
2108	fi
2109	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2110	done
2111	(( i = 0 ))
2112	while (( i < iout ))
2113	do
2114	(( i = i + 1 ))
2115	if (( i == 1 ))
2116	then
2117	printf "\n\n >>> OUTPUT-file assignments:\n"
2118	fi
2119	printf "\n ${localout[$i]} : ${pathout[$i]}"
2120	done
2121	(( i = 0 ))
2122	while (( i < iic ))
2123	do
2124	(( i = i + 1 ))
2125	if (( i == 1 ))
2126	then
2127	printf "\n\n >>> INPUT-commands:\n"
2128	fi
2129	printf "\n ${in_command[$i]}"
2130	done
2131	(( i = 0 ))
2132	while (( i < ioc ))
2133	do
2134	(( i = i + 1 ))
2135	if (( i == 1 ))
2136	then
2137	printf "\n\n >>> OUTPUT-commands:\n"
2138	fi
2139	printf "\n ${out_command[$i]}"
2140	done
2141	fi
2142
2143
2144	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2145	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2146	then
2147	antwort=dummy
2148	printf "\n\n"
2149	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2150	do
2151	printf " >>> everything o.k. (y/n) ? "
2152	read antwort
2153	done
2154	if [[ $antwort = n \|\| $antwort = N ]]
2155	then
2156	locat=user_abort; (( iec = 0 )); exit
2157	fi
2158	if [[ $do_batch = true ]]
2159	then
2160	printf " >>> batch-job will be created and submitted"
2161	else
2162	if [[ $local_compile = false ]]
2163	then
2164	printf " >>> MRUN will now continue to execute on this machine"
2165	else
2166	printf " >>> a test compilation will now be carried out on this machine"
2167	fi
2168	fi
2169	fi
2170
2171
2172
2173
2174	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2175	# CHENDE AKTIONEN DURCHGEFUEHRT
2176	if [[ $do_batch = false ]]
2177	then
2178
2179
2180	# TEMPORAEREN KATALOG ERZEUGEN
2181	mkdir -p $TEMPDIR
2182	chmod go+rx $TEMPDIR
2183	tmpcreate=true
2184
2185
2186	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2187	# TEMPORAERES VERZEICHNIS KOPIEREN
2188	if [[ $do_compile = true ]]
2189	then
2190
2191	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2192	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2193	if [[ $localhost = nech ]]
2194	then
2195	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2196	if mkdir -p $TEMPDIR_COMPILE
2197	then
2198	printf "\n *** \"$TEMPDIR_COMPILE\" "
2199	printf "\n is generated as temporary directory for cross compiling\n"
2200	else
2201	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2202	printf "\n needed for cross compilation failed"
2203	locat=compile
2204	exit
2205	fi
2206	else
2207	TEMPDIR_COMPILE=$TEMPDIR
2208	fi
2209
2210
2211	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2212	line=""
2213	grep "%depository_path" $config_file > tmp_mrun
2214	while read line
2215	do
2216	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2217	then
2218	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2219	then
2220	global_depository_path=`echo $line \| cut -d" " -s -f2`
2221	fi
2222	fi
2223	done < tmp_mrun
2224
2225	line=""
2226	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2227	while read line
2228	do
2229	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2230	then
2231	local_depository_path=`echo $line \| cut -d" " -s -f2`
2232	fi
2233	done < tmp_mrun
2234
2235	if [[ "$local_depository_path" = "" ]]
2236	then
2237	if [[ "$global_depository_path" != "" ]]
2238	then
2239	local_depository_path=$global_depository_path
2240	else
2241	printf "\n\n +++ no depository path found in configuration file"
2242	printf "\n for local host \"$localhost\" "
2243	printf "\n please set \"\%depository_path\" in configuration file\n"
2244	locat=config_file; exit
2245	fi
2246	fi
2247	eval local_depository_path=$local_depository_path
2248
2249	basename=`print $mainprog \| cut -f1 -d"."`
2250	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2251	if [[ ! -f $make_depository ]]
2252	then
2253	printf "\n"
2254	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2255	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2256	else
2257	cp $make_depository $TEMPDIR_COMPILE
2258	cd $TEMPDIR_COMPILE
2259	tar -xf $make_depository > /dev/null 2>&1
2260	cd - > /dev/null
2261	fi
2262
2263	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2264
2265	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2266	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2267	# MAKEFILE EINTRAGEN
2268	cd $TEMPDIR_COMPILE
2269	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2270	if [[ "$interface_file" != "" ]]
2271	then
2272	interface_file=`echo $interface_file \| cut -d"." -f1`
2273	mv Makefile Makefile_old
2274	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2275	fi
2276	cd - > /dev/null
2277	else
2278	cp $executable ${TEMPDIR}/a.out
2279	fi
2280
2281
2282	# WECHSEL IN TEMPORAEREN KATALOG
2283	cd $TEMPDIR
2284	printf "\n *** changed to temporary directory: $TEMPDIR"
2285
2286
2287	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2288	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2289	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2290	# ERMITTELN
2291	(( i = 0 ))
2292	while (( i < iout ))
2293	do
2294	(( i = i + 1 ))
2295	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2296	then
2297	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2298	else
2299	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2300	fi
2301	done
2302
2303
2304	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2305	if [[ $do_compile = true ]]
2306	then
2307
2308
2309	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2310	printf "\n\n\n *** compilation starts \n$striche\n"
2311	printf " *** compilation with make using following options:\n"
2312	printf " compilername: $compiler_name\n"
2313	printf " options: $fopts\n"
2314	printf " preprocessor-directives: $cpp_options \n"
2315	printf " linker-options: $lopts \n"
2316	printf " source code files: $source_list \n"
2317
2318	if [[ $localhost = nech ]]
2319	then
2320	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2321	cp $TEMPDIR_COMPILE/a.out .
2322	[[ $? != 0 ]] && compile_error=true
2323	rm -rf $TEMPDIR_COMPILE
2324	else
2325	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2326	fi
2327
2328	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2329	then
2330	printf "\n +++ error occured while compiling or linking"
2331	locat=compile
2332	exit
2333	else
2334	printf "$striche\n *** compilation finished \n"
2335	fi
2336	fi
2337
2338
2339	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2340	if [[ $local_compile = true ]]
2341	then
2342	cd $HOME
2343	rm -rf $TEMPDIR
2344	locat=local_compile; exit
2345	fi
2346
2347
2348	# BEREITSTELLEN DER INPUT-DATEIEN
2349	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2350	(( i = 0 ))
2351	while (( i < iin ))
2352	do
2353	(( i = i + 1 ))
2354	if (( i == 1 ))
2355	then
2356	printf "\n\n *** providing INPUT-files:\n$striche"
2357	fi
2358
2359
2360	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2361	if [[ "${transin[$i]}" = unavailable ]]
2362	then
2363	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2364	then
2365	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2366	printf "\n is not available!"
2367	else
2368	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2369	printf "\n is not available!"
2370	fi
2371	continue
2372	fi
2373
2374	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2375	files_for_pes=false; datentyp=file
2376	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2377	then
2378	files_for_pes=true; datentyp=directory
2379	actionin[$i]=""
2380	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2381	then
2382	actionin[$i]=""
2383	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2384	then
2385	files_for_pes=true; datentyp=directory
2386	actionin[$i]="ar"
2387	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2388	then
2389	actionin[$i]="ar"
2390	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2391	then
2392	files_for_pes=true; datentyp=directory
2393	actionin[$i]="fl"
2394	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2395	then
2396	actionin[$i]="fl"
2397	fi
2398
2399	if [[ $files_for_pes = true ]]
2400	then
2401	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2402	else
2403	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2404	fi
2405
2406	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2407	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2408	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2409	# SERVER ZU HOLEN
2410	if [[ "${actionin[$i]}" = fl ]]
2411	then
2412	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2413	if [[ $files_for_pes = false ]]
2414	then
2415	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2416	then
2417	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2418	got_tmp[$i]=true
2419	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2420	then
2421	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2422	printf "\n *** trying to use backup copy in \"$WORK\" "
2423	cp $WORK/${frelin[$i]} ${localin[$i]}
2424	else
2425	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2426	printf "\n or \"$tmp_data_catalog\" does not exist!"
2427	printf "\n *** trying to get copy from archive"
2428	actionin[$i]=ar
2429	fi
2430	else
2431	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2432	then
2433	mkdir ${localin[$i]}
2434	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2435	got_tmp[$i]=true
2436	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2437	then
2438	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2439	printf "\n *** trying to use backup copy in \"$WORK\" "
2440	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2441	else
2442	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2443	printf "\n or \"$tmp_data_catalog\" does not exist!"
2444	printf "\n *** trying to get copy from archive"
2445	actionin[$i]=ar
2446	fi
2447	fi
2448	fi
2449
2450
2451	# DATEI LIEGT AUF ARCHIV-SERVER
2452	if [[ "${actionin[$i]}" = ar ]]
2453	then
2454
2455	if [[ $files_for_pes = false ]]
2456	then
2457	printf "\n file will be restored from archive-system ($archive_system)!"
2458	else
2459	printf "\n directory will be restored from archive-system ($archive_system)!"
2460	fi
2461
2462	file_restored=false
2463
2464	if [[ $archive_system = asterix ]]
2465	then
2466	do_stagein=true
2467	(( stagein_anz = 0 ))
2468	while [[ $do_stagein = true ]]
2469	do
2470	if [[ $files_for_pes = false ]]
2471	then
2472	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2473	else
2474	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2475	fi
2476	cat STAGEIN_OUTPUT
2477	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2478	then
2479	file_restored=true
2480	do_stagein=false
2481	else
2482	(( stagein_anz = stagein_anz + 1 ))
2483	if (( stagein_anz == 10 ))
2484	then
2485	printf "\n +++ stagein stoped after 10 tries"
2486	locat=stage
2487	exit
2488	fi
2489	printf "\n +++ restoring from archive failed, trying again:"
2490	sleep 900
2491	fi
2492	done
2493	elif [[ $archive_system = DMF ]]
2494	then
2495	if [[ $files_for_pes = false ]]
2496	then
2497	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2498	locat=DMF
2499	exit
2500	else
2501	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2502	cp -r $ARCHIVE/${frelin[$i]} $PWD
2503	file_restored=true
2504	fi
2505	elif [[ $archive_system = tivoli ]]
2506	then
2507	if [[ $files_for_pes = false ]]
2508	then
2509	if [[ $localhost = ibmh ]]
2510	then
2511	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2512	else
2513	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2514	fi
2515	else
2516	(( inode = 0 ))
2517	while (( inode < nodes ))
2518	do
2519	if [[ $localhost = ibmh ]]
2520	then
2521	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2522	else
2523	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2524	fi
2525	(( inode = inode + 1 ))
2526	done
2527	fi
2528	file_restored=true
2529	elif [[ $archive_system = ut ]]
2530	then
2531	if [[ $files_for_pes = false ]]
2532	then
2533	cp $UT/${frelin[$i]} .
2534	else
2535	(( inode = 0 ))
2536	while (( inode < nodes ))
2537	do
2538	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2539	(( inode = inode + 1 ))
2540	done
2541	fi
2542	file_restored=true
2543	else
2544	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2545	locat=rearchive
2546	exit
2547	fi
2548
2549	if [[ $file_restored = true ]]
2550	then
2551
2552	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2553	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2554	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2555	if [[ $files_for_pes = false ]]
2556	then
2557	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2558	else
2559	mkdir $tmp_data_catalog/${frelin[$i]}
2560	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2561	fi
2562	got_tmp[$i]=true
2563
2564	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2565	mv ${frelin[$i]} ${localin[$i]}
2566
2567	fi
2568	fi
2569
2570
2571	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2572	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2573	then
2574
2575	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2576	then
2577
2578	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2579	printf "\n file will be provided for $numprocs processors"
2580	mkdir ${localin[$i]}
2581	ival=$numprocs
2582	(( ii = 0 ))
2583	while (( ii <= ival-1 ))
2584	do
2585	if (( ii < 10 ))
2586	then
2587	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2588	elif (( ii < 100 ))
2589	then
2590	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2591	elif (( ii < 1000 ))
2592	then
2593	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2594	else
2595	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2596	fi
2597	(( ii = ii + 1 ))
2598	done
2599
2600	else
2601
2602	if [[ $files_for_pes = true ]]
2603	then
2604
2605	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2606	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2607	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2608	# PER MOVE UMBENANNT WERDEN
2609	printf "\n providing $numprocs files for the respective processors"
2610	mkdir ${localin[$i]}
2611	cp -r ${absnamein[$i]}/* ${localin[$i]}
2612
2613	else
2614	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2615	cp ${absnamein[$i]} ${localin[$i]}
2616	fi
2617	fi
2618	fi
2619
2620	done
2621	if (( i != 0 ))
2622	then
2623	printf "\n$striche\n *** all INPUT-files provided \n"
2624	fi
2625
2626
2627	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2628	# LESEN VON PALM)
2629	cat > ENVPAR << %%END%%
2630	&envpar run_identifier = '$fname', host = '$localhost',
2631	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2632	maximum_cpu_time_allowed = ${cpumax}.,
2633	revision = '$global_revision' /
2634
2635	%%END%%
2636
2637
2638	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2639	(( i = 0 ))
2640	while (( i < iic ))
2641	do
2642	(( i = i + 1 ))
2643	if (( i == 1 ))
2644	then
2645	printf "\n\n *** execution of INPUT-commands:\n$striche"
2646	fi
2647	printf "\n >>> ${in_command[$i]}"
2648	eval ${in_command[$i]}
2649	if (( i == iic ))
2650	then
2651	printf "\n$striche\n"
2652	fi
2653	done
2654
2655
2656	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2657	cpurest=${cpumax}.
2658
2659
2660	# PROGRAMMSTART
2661	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2662	PATH=$PATH:$TEMPDIR
2663
2664	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2665	then
2666	if [[ "$ENVIRONMENT" = BATCH ]]
2667	then
2668	printf "\n +++ debug is allowed in interactive mode only"
2669	locat=debug
2670	exit
2671	fi
2672	if [[ $localhost = decalpha ]]
2673	then
2674	dxladebug a.out
2675	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2676	then
2677
2678	# SETUP THE IBM MPI ENVIRONMENT
2679	export MP_SHARED_MEMORY=yes
2680	export AIXTHREADS_SCOPE=S
2681	export OMP_NUM_THREADS=$threads_per_task
2682	export AUTHSTATE=files
2683	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2684
2685	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2686	export MP_ADAPTER_USE=shared
2687	export MP_CPU_USE=multiple
2688	export MP_TIMEOUT=1200
2689
2690	unset MP_TASK_AFFINITY
2691
2692	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2693	#(( ii = 1 ))
2694	#while (( ii <= $numprocs ))
2695	#do
2696	# echo $localhost_realname >> hostfile
2697	# (( ii = ii + 1 ))
2698	#done
2699	#export MP_HOSTFILE=hostfile
2700
2701	if [[ "$LOADLBATCH" = yes ]]
2702	then
2703	totalview poe a.out $ROPTS
2704	else
2705	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2706	export TVDSVRLAUNCHCMD=ssh
2707	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2708	fi
2709	else
2710	printf "\n +++ no debug available on \"$localhost\" "
2711	printf "\n or not implemented in mrun so far"
2712	locat=debug
2713	exit
2714	fi
2715	else
2716	if [[ -n $numprocs ]]
2717	then
2718
2719	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2720	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2721	then
2722	# SETUP THE IBM MPI ENVIRONMENT
2723	export MP_SHARED_MEMORY=yes
2724	export AIXTHREAD_SCOPE=S
2725	export OMP_NUM_THREADS=$threads_per_task
2726	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2727	export AUTHSTATE=files
2728	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2729	# export MP_PRINTENV=yes
2730
2731	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2732	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2733	export MP_WAIT_MODE=poll
2734	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2735	# export MP_EAGER_LIMIT=65535
2736
2737	# # TESTWEISE FUER TURBOMPI (JAN 05)
2738	# export MPJ_MTAB=128
2739	# export MPJ_ALLTOALL=1
2740	# export MPJ_ALLTOALLV=1
2741
2742	if [[ "$LOADLBATCH" = yes ]]
2743	then
2744	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2745	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2746	then
2747	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
2748	else
2749	poe ./a.out $ROPTS > aout_output 2>&1
2750	fi
2751	else
2752	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2753	then
2754	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
2755	elif [[ $localhost = ibmy ]]
2756	then
2757	if [[ -f $hostfile ]]
2758	then
2759	cp $hostfile hostfile
2760	else
2761	(( ii = 1 ))
2762	while (( ii <= $numprocs ))
2763	do
2764	echo $localhost_realname >> hostfile
2765	(( ii = ii + 1 ))
2766	done
2767	fi
2768	export MP_HOSTFILE=hostfile
2769	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
2770	else
2771	if [[ "$host_file" = "" ]]
2772	then
2773	printf "\n +++ no hostfile given in configuration file"
2774	locat=config_file
2775	exit
2776	else
2777	eval host_file=$host_file
2778	fi
2779	export MP_HOSTFILE=$host_file
2780	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
2781	fi
2782	fi
2783	elif [[ $host = nech \|\| $host = neck ]]
2784	then
2785	(( ii = nodes ))
2786	if [[ $ii = 1 ]]
2787	then
2788	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2789	export MPIPROGINF=YES
2790	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2791	echo "*** execution on single node with mpirun"
2792	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
2793	else
2794	(( i = 0 ))
2795	while (( i < ii ))
2796	do
2797	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2798	(( i = i + 1 ))
2799	done
2800
2801	echo "#!/bin/sh" > mpi_exec_shell
2802	echo " " >> mpi_exec_shell
2803	echo "set -u" >> mpi_exec_shell
2804	echo "F_ERRCNT=0" >> mpi_exec_shell
2805	echo "MPIPROGINV=YES" >> mpi_exec_shell
2806	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2807	echo "cpurest=$cpurest" >> mpi_exec_shell
2808	echo "fname=$fname" >> mpi_exec_shell
2809	echo "localhost=$localhost" >> mpi_exec_shell
2810	echo "return_addres=$return_addres" >> mpi_exec_shell
2811	echo "return_username=$return_username" >> mpi_exec_shell
2812	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2813	echo "write_binary=$write_binary" >> mpi_exec_shell
2814	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2815	echo " " >> mpi_exec_shell
2816	echo "export F_ERRCNT" >> mpi_exec_shell
2817	echo "export MPIPROGINV" >> mpi_exec_shell
2818	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2819	echo "export cpurest" >> mpi_exec_shell
2820	echo "export fname" >> mpi_exec_shell
2821	echo "export localhost" >> mpi_exec_shell
2822	echo "export return_addres" >> mpi_exec_shell
2823	echo "export return_username" >> mpi_exec_shell
2824	echo "export tasks_per_node" >> mpi_exec_shell
2825	echo "export write_binary" >> mpi_exec_shell
2826	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2827	echo " " >> mpi_exec_shell
2828	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
2829
2830	chmod u+x mpi_exec_shell
2831	export MPIPROGINF=YES
2832	mpirun -f multinode_config &
2833	wait
2834
2835	fi
2836	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2837	then
2838
2839	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2840	# DOES NOT EXIST
2841	if [[ -f $hostfile ]]
2842	then
2843	cp $hostfile hostfile
2844	else
2845	(( ii = 1 ))
2846	while (( ii <= $numprocs / $threads_per_task ))
2847	do
2848	echo $localhost_realname >> hostfile
2849	(( ii = ii + 1 ))
2850	done
2851	fi
2852	(( ii = $numprocs / $threads_per_task ))
2853	eval zeile=\"`head -n $ii hostfile`\"
2854	printf "\n *** running on: $zeile"
2855	export OMP_NUM_THREADS=$threads_per_task
2856	if [[ $threads_per_task != 1 ]]
2857	then
2858	printf "\n threads per task: $threads_per_task"
2859	fi
2860	printf "\n\n"
2861	if [[ $scirocco = true ]]
2862	then
2863	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
2864	else
2865	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
2866	fi
2867	elif [[ $host = decalpha ]]
2868	then
2869	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
2870	elif [[ $host = lctit ]]
2871	then
2872	export runfile=runfile.$kennung
2873
2874	echo "cd $PWD" > $runfile
2875	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2876	echo "export cpurest=$cpurest" >> $runfile
2877	echo "export fname=$fname" >> $runfile
2878	echo "export localhost=$localhost" >> $runfile
2879	echo "export return_addres=$return_addres" >> $runfile
2880	echo "export return_username=$return_username" >> $runfile
2881	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2882	echo "export write_binary=$write_binary" >> $runfile
2883	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2884	echo "./a.out" >> $runfile
2885	chmod u+x $runfile
2886
2887	if [[ "$QUEUE" = interactive ]]
2888	then
2889	mpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
2890	else
2891	n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS > aout_output 2>&1
2892	fi
2893
2894	rm $runfile
2895	else
2896	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
2897	fi
2898	[[ $? != 0 ]] && execution_error=true
2899
2900
2901	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2902	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2903	then
2904	apprentice
2905	fi
2906	else
2907	a.out $ROPTS > aout_output 2>&1
2908	fi
2909	fi
2910	if [[ $? != 0 \|\| $execution_error = true ]]
2911	then
2912
2913	# ABBRUCH BEI LAUFZEITFEHLER
2914	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2915	printf "\n +++ runtime error occured"
2916	locat=execution
2917	exit
2918	else
2919	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2920	printf "\n$striche\n *** execution finished \n"
2921	fi
2922
2923
2924
2925	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2926	(( i = 0 ))
2927	while (( i < ioc ))
2928	do
2929	(( i = i + 1 ))
2930	if (( i == 1 ))
2931	then
2932	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2933	fi
2934	printf "\n >>> ${out_command[$i]}"
2935	eval ${out_command[$i]}
2936	if (( i == ioc ))
2937	then
2938	printf "\n$striche\n"
2939	fi
2940	done
2941
2942
2943	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2944	if [[ $do_trace = true ]]
2945	then
2946	printf "\n\n"
2947	ls -al
2948	fi
2949
2950
2951
2952	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2953	(( i = 0 ))
2954	while (( i < iout ))
2955	do
2956	(( i = i + 1 ))
2957	if (( i == 1 ))
2958	then
2959	printf "\n\n *** saving OUTPUT-files:\n$striche"
2960	fi
2961
2962	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2963	files_for_pes=false; filetyp=file
2964	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2965	then
2966	files_for_pes=true; filetyp=directory
2967	actionout[$i]=""
2968	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2969	then
2970	actionout[$i]=""
2971	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2972	then
2973	files_for_pes=true; filetyp=directory
2974	actionout[$i]="ar"
2975	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2976	then
2977	actionout[$i]="ar"
2978	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2979	then
2980	files_for_pes=true; filetyp=directory
2981	actionout[$i]="fl"
2982	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2983	then
2984	actionout[$i]="fl"
2985	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2986	then
2987	files_for_pes=true; filetyp=directory
2988	actionout[$i]="tr"
2989	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2990	then
2991	actionout[$i]="tr"
2992	fi
2993
2994	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2995	then
2996	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2997	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2998	then
2999	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3000	else
3001
3002
3003	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3004	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3005	# REMOTE-RECHNUNGEN
3006	if [[ "${actionout[$i]}" = tr ]]
3007	then
3008	if [[ $localhost != $fromhost ]]
3009	then
3010	if [[ $files_for_pes = false ]]
3011	then
3012	cps=""
3013	cst=""
3014	else
3015	cps=-c
3016	cst="/"
3017	fi
3018	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3019	then
3020
3021	# TRANSFER IN EIGENSTAENDIGEM JOB
3022	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3023	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3024	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3025	if [[ $files_for_pes = false ]]
3026	then
3027	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3028	else
3029	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3030	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3031	fi
3032
3033	echo "set -x" > transfer_${localout[$i]}
3034	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3035
3036	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3037	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3038	printf "\n or higher cycle\n"
3039	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3040
3041	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3042
3043	if [[ $localhost = nech ]]
3044	then
3045	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3046	else
3047	if [[ "$LOGNAME" = b323013 ]]
3048	then
3049	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3050	else
3051	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3052	fi
3053	fi
3054
3055	else
3056
3057	# TRANSFER INNERHALB DIESES JOBS
3058	transfer_failed=false
3059	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3060	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3061	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3062	[[ $? != 0 ]] && transfer_failed=true
3063
3064	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3065	# LOKALER MASCHINE ANLEGEN
3066	if [[ $transfer_failed = true ]]
3067	then
3068	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3069	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3070
3071	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3072	# ANLEGEN.
3073	eval local_catalog=${pathout[$i]}
3074	if [[ ! -d $local_catalog ]]
3075	then
3076	printf " *** local directory does not exist. Trying to create:\n"
3077	printf " $local_catalog \n"
3078	mkdir -p $local_catalog
3079	fi
3080	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3081	transfer_problems=true
3082	fi
3083	fi
3084	else
3085
3086	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3087	actionout[$i]=""
3088	fi
3089	fi
3090
3091
3092	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3093	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3094	# REMOTE-RECHNUNGEN
3095	if [[ "${actionout[$i]}" = tra ]]
3096	then
3097	if [[ $localhost != $fromhost ]]
3098	then
3099	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3100	then
3101
3102	# TRANSFER IN EIGENSTAENDIGEM JOB
3103	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3104	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3105	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3106	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3107
3108	echo "set -x" > transfer_${localout[$i]}
3109	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3110
3111	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3112	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3113	printf "\n or higher cycle\n"
3114	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3115
3116	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3117
3118	if [[ $localhost = nech ]]
3119	then
3120	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3121	else
3122	if [[ $LOGNAME = b323013 ]]
3123	then
3124	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3125	else
3126	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3127	fi
3128	fi
3129
3130	else
3131
3132	# TRANSFER INNERHALB DIESES JOBS
3133	transfer_failed=false
3134	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3135	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3136	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3137	[[ $? != 0 ]] && transfer_failed=true
3138
3139	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3140	# LOKALER MASCHINE ANLEGEN
3141	if [[ $transfer_failed = true ]]
3142	then
3143	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3144	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3145
3146	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3147	# ANLEGEN
3148	eval local_catalog=${pathout[$i]}
3149	if [[ ! -d $local_catalog ]]
3150	then
3151	printf " *** local directory does not exist. Trying to create:\n"
3152	printf " $local_catalog \n"
3153	mkdir -p $local_catalog
3154	fi
3155
3156	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3157	transfer_problems=true
3158	fi
3159	fi
3160	else
3161
3162	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3163	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3164	actionout[$i]=a
3165	fi
3166	fi
3167
3168
3169	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3170	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3171	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3172	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3173	if [[ "${actionout[$i]}" = fl ]]
3174	then
3175	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3176	chmod g+rx $tmp_data_catalog
3177	if [[ $files_for_pes = false ]]
3178	then
3179	printf "\n >>> OUTPUT: ${localout[$i]} to"
3180	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3181	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3182	else
3183	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3184	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3185	mkdir $tmp_data_catalog/${frelout[$i]}
3186	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3187	fi
3188
3189
3190	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3191	if [[ $store_on_archive_system = true ]]
3192	then
3193
3194	if [[ $archive_system = asterix ]]
3195	then
3196	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3197	if [[ $files_for_pes = false ]]
3198	then
3199	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3200	else
3201	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3202	fi
3203	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3204	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3205	echo "then" >> archive_${frelout[$i]}
3206	echo " do_stageout=false" >> archive_${frelout[$i]}
3207	echo "else" >> archive_${frelout[$i]}
3208	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3209	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3210	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3211	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3212	if [[ $files_for_pes = false ]]
3213	then
3214	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3215	else
3216	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3217	fi
3218	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3219	echo "fi" >> archive_${frelout[$i]}
3220	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3221	elif [[ $archive_system = DMF ]]
3222	then
3223	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3224	if [[ $files_for_pes = false ]]
3225	then
3226	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3227	locat=DMF
3228	exit
3229	else
3230	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3231	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3232	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3233	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3234	fi
3235	elif [[ $archive_system = tivoli ]]
3236	then
3237	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3238	if [[ $files_for_pes = false ]]
3239	then
3240	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3241	echo "set -x" >> archive_${frelout[$i]}
3242	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3243	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3244	else
3245
3246	echo "set -x" >> archive_${frelout[$i]}
3247	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3248	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3249	cd $tmp_data_catalog
3250	all_files=`ls -1 ${frelout[$i]}/*`
3251	cd - > /dev/null
3252	(( inode = 0 ))
3253	(( tp1 = tasks_per_node + 1 ))
3254	while (( inode < nodes ))
3255	do
3256	# echo "*** all_files = \"$all_files\" "
3257	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3258	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3259	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3260	# echo "*** files = \"$files\" "
3261	# echo "*** all_files = \"$all_files\" "
3262	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3263	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3264	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3265	(( inode = inode + 1 ))
3266	done
3267	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3268	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3269	fi
3270	elif [[ $archive_system = ut ]]
3271	then
3272	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3273	if [[ $files_for_pes = false ]]
3274	then
3275	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3276	echo "set -x" >> archive_${frelout[$i]}
3277	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3278	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3279	else
3280
3281	echo "set -x" >> archive_${frelout[$i]}
3282	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3283	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3284	cd $tmp_data_catalog
3285	all_files=`ls -1 ${frelout[$i]}/*`
3286	cd - > /dev/null
3287	(( inode = 0 ))
3288	(( tp1 = tasks_per_node + 1 ))
3289	while (( inode < nodes ))
3290	do
3291	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3292	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3293	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3294	(( inode = inode + 1 ))
3295	done
3296	fi
3297	elif [[ $archive_system = none ]]
3298	then
3299	printf " +++ archiving on $localhost not available!\n"
3300	fi
3301
3302	if [[ $archive_system != none ]]
3303	then
3304	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3305	then
3306	subjob -d -v -q cdata -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3307	elif [[ $localhost = nech ]]
3308	then
3309	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3310	fi
3311	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3312	fi
3313	else
3314	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3315	fi
3316
3317
3318	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3319	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3320	if [[ $files_for_pes = false ]]
3321	then
3322	cat /dev/null > ${pathout[$i]}
3323	else
3324	mkdir -p ${pathout[$i]}
3325	fi
3326
3327	fi
3328
3329
3330	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3331	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3332	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3333	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3334	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3335	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3336	if [[ "${actionout[$i]}" = ar ]]
3337	then
3338	if [[ $files_for_pes = false ]]
3339	then
3340	printf "\n >>> OUTPUT: ${localout[$i]} to"
3341	printf "\n ${pathout[$i]}"
3342	printf "\n File will be copied to archive-system ($archive_system) !\n"
3343	else
3344	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3345	printf "\n ${pathout[$i]}"
3346	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3347	fi
3348	mv ${localout[$i]} ${frelout[$i]}
3349
3350	file_saved=false
3351
3352	if [[ $archive_system = asterix ]]
3353	then
3354	do_stageout=true
3355	(( stageout_anz = 0 ))
3356	while [[ $do_stageout = true ]]
3357	do
3358	if [[ $files_for_pes = false ]]
3359	then
3360	stageout ${frelout[$i]} > STAGE_OUTPUT
3361	else
3362	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3363	fi
3364	cat STAGE_OUTPUT
3365	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3366	then
3367	file_saved=true
3368	do_stageout=false
3369	else
3370	if [[ $files_for_pes = false ]]
3371	then
3372	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3373	else
3374	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3375	fi
3376	(( stageout_anz = stageout_anz + 1 ))
3377	if (( stageout_anz == 10 ))
3378	then
3379	printf "\n +++ stoped after 10 unsuccessful tries!"
3380	archive_save=false
3381	do_stageout=false
3382	else
3383	printf "\n *** new try to store on archive after 15 min:"
3384	sleep 900
3385	fi
3386	fi
3387	done
3388	elif [[ $archive_system = DMF ]]
3389	then
3390	if [[ $files_for_pes = false ]]
3391	then
3392	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3393	locat=DMF
3394	exit
3395	else
3396	rm -rf $ARCHIVE/${frelout[$i]}
3397	cp -r ${frelout[$i]} $ARCHIVE
3398	fi
3399	file_saved=true
3400	elif [[ $archive_system = tivoli ]]
3401	then
3402	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3403	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3404	# GELEGT WERDEN
3405	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3406	chmod g+rx $tmp_data_catalog
3407	if [[ $files_for_pes = false ]]
3408	then
3409	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3410	else
3411	mkdir $tmp_data_catalog/${frelout[$i]}
3412	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3413	fi
3414
3415	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3416	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3417	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3418	if [[ $files_for_pes = false ]]
3419	then
3420	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3421	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3422	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3423	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3424	else
3425	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3426	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3427	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3428	fi
3429
3430	subjob -v -d -q cdata -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3431	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3432	file_saved=true
3433
3434	elif [[ $archive_system = ut ]]
3435	then
3436	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3437	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3438	# GELEGT WERDEN
3439	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3440	chmod g+rx $tmp_data_catalog
3441	if [[ $files_for_pes = false ]]
3442	then
3443	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3444	else
3445	mkdir $tmp_data_catalog/${frelout[$i]}
3446	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3447	fi
3448
3449	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3450	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3451	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3452	if [[ $files_for_pes = false ]]
3453	then
3454	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3455	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3456	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3457	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3458	else
3459	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3460	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3461	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3462	fi
3463
3464	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3465	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3466	file_saved=true
3467
3468	else
3469	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3470	archive_save=false
3471	fi
3472	if [[ $file_saved = true ]]
3473	then
3474	if [[ $files_for_pes = false ]]
3475	then
3476	cat /dev/null > ${pathout[$i]}
3477	else
3478	mkdir -p ${pathout[$i]}
3479	fi
3480	fi
3481	fi
3482
3483	# APPEND AUF LOKALER MASCHINE
3484	if [[ "${actionout[$i]}" = "a" ]]
3485	then
3486	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3487	cat ${localout[$i]} >> ${pathout[$i]}
3488	fi
3489
3490	# KOPIEREN AUF LOKALER MASCHINE
3491	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3492	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3493	then
3494
3495	# KOPIEREN AUF EINPROZESSORMASCHINE
3496	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3497	then
3498	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3499	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3500	else
3501	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3502	cp ${localout[$i]} ${pathout[$i]}
3503	fi
3504
3505	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3506	then
3507
3508	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3509	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3510	# WIRD DANN KOPIERT
3511	# PER MOVE UMBENANNT WERDEN
3512	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3513	cp -r ${localout[$i]} ${pathout[$i]}
3514
3515	fi
3516	fi
3517	done
3518	if (( i != 0 ))
3519	then
3520	if [[ $transfer_problems = true ]]
3521	then
3522	printf "\n$striche\n *** OUTPUT-files saved"
3523	printf "\n +++ WARNING: some data transfers failed! \n"
3524	else
3525	printf "\n$striche\n *** all OUTPUT-files saved \n"
3526	fi
3527	fi
3528
3529
3530	# EVENTUELL FOLGEJOB STARTEN
3531	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3532	if [[ -f CONTINUE_RUN ]]
3533	then
3534
3535	if [[ $archive_save = true ]]
3536	then
3537
3538	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3539	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3540	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3541	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3542	# HANDEN
3543	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3544	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3545	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3546	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3547	then
3548	mc=`echo $mc \| sed 's/#/f/g'`
3549	fi
3550
3551
3552	# JOB STARTEN
3553	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3554	echo " $mc"
3555	printf "\n$striche\n"
3556	if [[ $localhost != $fromhost ]]
3557	then
3558
3559	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3560	then
3561	echo "*** ssh will be used to initiate restart-runs!"
3562	echo " return_addres=\"$return_addres\" "
3563	echo " return_username=\"$return_username\" "
3564	if [[ $return_addres = 172.20.25.41 ]]
3565	then
3566	# WORKAROUND AUF SCIROCCO AM TIT
3567	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3568	else
3569	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3570	fi
3571	else
3572	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3573	locat=restart; exit
3574	fi
3575
3576	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3577	# DER AKTUELLE JOB ENDET
3578	sleep 30
3579
3580	else
3581
3582	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3583	# RUFEN WERDEN
3584	cd $LOCAL_PWD
3585	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3586	cd - > /dev/null
3587	fi
3588	printf "\n$striche\n *** restart-run initiated \n"
3589
3590
3591	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3592	# GEHOLT WORDEN SIND, LOESCHEN
3593	(( i = 0 ))
3594	while (( i < iin ))
3595	do
3596	(( i = i + 1 ))
3597	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3598	then
3599	rm -r $tmp_data_catalog/${frelin[$i]}
3600	fi
3601	done
3602
3603	else
3604
3605	printf "\n +++ no restart-run possible, since errors occured"
3606	printf "\n during the archive process"
3607	fi
3608
3609	fi
3610
3611
3612
3613	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3614	if [[ "$email_notification" != "" ]]
3615	then
3616
3617	if [[ $localhost != $fromhost ]]
3618	then
3619	if [[ -f CONTINUE_RUN ]]
3620	then
3621	echo "PALM restart run necessary" > email_text
3622	echo "description header of actual run:" >> email_text
3623	cat CONTINUE_RUN >> email_text
3624	echo "mrun-command to restart:" >> email_text
3625	echo "$mc" >> email_text
3626	else
3627	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3628	fi
3629	mail $email_notification < email_text
3630	printf "\n *** email notification sent to \"$email_notification\" "
3631	fi
3632	fi
3633
3634
3635
3636	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3637	cd $HOME
3638	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3639
3640	else
3641
3642
3643	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3644	# CHENDE AKTIONEN DURCHGEFUEHRT
3645
3646	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3647	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3648	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3649	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3650	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3651	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3652	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3653	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3654	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3655	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3656	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3657	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3658	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3659	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3660	if [[ $use_openmp = true ]]
3661	then
3662	mrun_com=${mrun_com}" -O"
3663	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3664	else
3665	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3666	fi
3667	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3668	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3669	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3670	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3671	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3672	if [[ $do_remote = true ]]
3673	then
3674	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3675	fi
3676
3677
3678	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3679	jobfile=jobfile.$RANDOM
3680
3681
3682	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3683	echo "mkdir $TEMPDIR" >> $jobfile
3684	echo "cd $TEMPDIR" >> $jobfile
3685
3686
3687	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3688	if [[ $do_trace = true ]]
3689	then
3690	echo "set -x" >> $jobfile
3691	else
3692	echo "set +vx" >> $jobfile
3693	fi
3694
3695
3696	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3697	# SOWIE GEGEBENENFALLS DES MAKEFILES
3698	if [[ $do_compile = true ]]
3699	then
3700
3701	source_catalog=SOURCES_FOR_RUN_$fname
3702
3703	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3704	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3705	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3706	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3707	echo "export SOURCES_COMPLETE=true" >> $jobfile
3708	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3709
3710	for filename in $source_list
3711	do
3712	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3713	echo "cat > $filename << \"%END%\"" >> $jobfile
3714	cat $source_catalog/$filename >> $jobfile
3715	echo " " >> $jobfile
3716	echo "%END%" >> $jobfile
3717	echo " " >> $jobfile
3718	done
3719
3720	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3721	echo "cat > Makefile << \"%END%\"" >> $jobfile
3722	cat $source_catalog/Makefile >> $jobfile
3723	echo " " >> $jobfile
3724	echo "%END%" >> $jobfile
3725	echo " " >> $jobfile
3726
3727	echo "cd - > /dev/null" >> $jobfile
3728
3729	fi
3730
3731
3732	# ABSPEICHERN DER KONFIGURATIONSDATEI
3733	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3734	echo "cat > $config_file << \"%END%\"" >> $jobfile
3735	cat $config_file >> $jobfile
3736	echo "%END%" >> $jobfile
3737	echo " " >> $jobfile
3738
3739
3740	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3741	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3742	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3743	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3744	echo "%END%" >> $jobfile
3745	if [[ $host = lctit ]]
3746	then
3747	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3748	echo "mv mrun_new $mrun_script_name" >> $jobfile
3749	fi
3750	echo "chmod u+x $mrun_script_name" >> $jobfile
3751	echo "execute_mrun=true" >> $jobfile
3752	echo " " >> $jobfile
3753
3754	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3755	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3756	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3757	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3758	if [[ $do_remote = true ]]
3759	then
3760	(( i = 0 ))
3761	while (( i < iin ))
3762	do
3763	(( i = i + 1 ))
3764	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3765	if [[ "${transin[$i]}" = job ]]
3766	then
3767	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3768	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3769	echo " " >> $jobfile
3770	echo "%END%" >> $jobfile
3771	else
3772	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3773	fi
3774
3775	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3776	echo "if [[ \$? = 1 ]]" >> $jobfile
3777	echo "then" >> $jobfile
3778	echo " echo \" \" " >> $jobfile
3779	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3780	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3781	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3782	echo " execute_mrun=false" >> $jobfile
3783	echo "fi" >> $jobfile
3784	done
3785	fi
3786
3787	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3788	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3789	echo "LOCAL_PWD=$working_directory" >> $jobfile
3790	echo "export LOCAL_PWD" >> $jobfile
3791
3792	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3793	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3794	echo "export LOCAL_MRUN_PATH" >> $jobfile
3795
3796	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3797	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3798	then
3799	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3800	fi
3801
3802	# MRUN AUF ZIELRECHNER AUFRUFEN
3803	echo "set -x" >> $jobfile
3804	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3805
3806	echo 'ls -al; echo `pwd`' >> $jobfile
3807	echo "cd \$HOME" >> $jobfile
3808	echo "rm -rf $TEMPDIR" >> $jobfile
3809
3810
3811
3812
3813	# JOB PER SUBJOB STARTEN
3814	if [[ $silent = false ]]
3815	then
3816	printf "\n "
3817	else
3818	printf "\n\n"
3819	fi
3820
3821	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v $jobfile
3822	rm -rf $jobfile
3823
3824
3825	fi # ENDE REMOTE-TEIL
3826
3827
3828
3829	# ENDE DER PROZEDUR

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

| Impressum | ©Leibniz Universität Hannover |