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source: palm/trunk/SCRIPTS/mrun @ 42

Last change on this file since 42 was 33, checked in by raasch, 18 years ago
small modification to mrun
File size: 147.1 KB

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1	#!/bin/ksh
2
3	##!/home/DSRC/NC/tatuyama/pub/ksh NEEDED ON NEC AT RIAM !!!!!!!!!!
4
5	# mrun - Plot-Shellskript Version: @(#)MRUN 1.8 28/02/07
6
7	# Prozedur zum Starten von Modellaeufen
8
9	# letzte Aenderung:
10	# 03/03/94 - Siggi - Entwicklungsbeginn
11	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
12	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
13	# zelne Variable exportiert. Dies ist noetig, weil an-
14	# sonsten irgendein Speicher ueberlaeuft und von mrun
15	# aufgerufene Programme (z.B. stageout) mit Fehlern
16	# abbrechen (too many arguments)
17	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
18	# defaultmaessig im RRZN-Profile eingeschaltet
19	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
20	# wegfallen
21	# 25/04/00 - Siggi - Version 1.5
22	# remote_addres und remote_user in return_addres bzw.
23	# return_username umbenannt, return_username wird dem
24	# mrun-Aufruf im Job ueber Option -U mitgegeben.
25	# Neue Variable remote_username, die beim interaktiven
26	# mrun-Aufruf zwingend ueber die neue Option -u oder
27	# in der Konfigurationsdatei angegeben werden muss.
28	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
29	# Version 1.7
30	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
31	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
32	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
33	# zu bestimmen; Praeprozessoroptionen haben nun alle
34	# die Form -Dtext=text, weil auf IBM sonst text durch
35	# die leere Zeichenkette ersetzt wird
36	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
37	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
38	# (-D$OMP=OMP) in order to avoid problems with
39	# OMP_NUM_THREADS
40	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
41	# tar files, one for each node used
42	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
43	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
44	# 17/01/05 - Siggi - job for data transfer to local machine now within
45	# job class c1 (HLRN)
46	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
47	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
48	# base filename and cycle number
49	# 16/02/05 - Gerald - hababai validated
50	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
51	# 29/03/05 - Marcus - berni*-en0 validated
52	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
53	# 24/04/05 - Siggi - netcdf support on lcmuk
54	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
55	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
56	# number) can now be used within interactive runs
57	# 12/05/05 - Siggi - netcdf support on ibm
58	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
59	# 18/05/05 - Siggi - netcdf support on nec
60	# 24/05/05 - Siggi - netcdf support on ibms
61	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
62	# to 30 seconds
63	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
64	# PATH is temporarily set)
65	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
66	# caused warnings in the job protocol
67	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
68	# 25/10/05 - Siggi - error in listing files for getting the cycle number
69	# removed
70	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
71	# realized by file attribute trpe
72	# 28/10/05 - Siggi - if existing, the file extension is output in case
73	# of missing input file - no job abort in case of
74	# missing input files with file extensions
75	# (preliminary solution)
76	# 31/10/05 - Siggi - data transfer from nech now within seperate job
77	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
78	# 07/12/05 - Siggi - gallego and elephanta admitted
79	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
80	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
81	# 20/01/06 - Siggi - cpp directive for ibmy
82	# 09/02/06 - Siggi - ibmy admitted for batch mode
83	# 13/04/06 - Siggi - ostria admitted
84	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
85	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
86	# optimization of OpenMP runs (option stacksize is
87	# necessary for large gridpoint numbers because
88	# otherwise a segmentation fault occurs)
89	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
90	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
91	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
92	# 20/09/06 - Marcus - add DVRP library on nech
93	# 24/10/06 - Siggi - Environment variables for PALM steering are written
94	# on local NAMELIST file ENVPAR
95	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
96	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
97	# 06/02/07 - Siggi - add DVRP library on lcmuk
98	# 07/02/07 - Siggi - revision of source code handling, source code is
99	# now expected in directory given by source_path and
100	# not in the current working directory, source code
101	# files provided in add_source_path are allways
102	# compiled, source code to be compiled is allways
103	# sampled in SOURCES_FOR_RUN_$fname which is a
104	# subdirectory of the current working directory,
105	# -s TEST changed to -s WRITE_PERMIT or -s WP,
106	# adapted for RIAM (neck)
107	# bugfix for cycle number of output file (extout)
108	# all hpmuk-related code removed
109	# 14/02/07 - Siggi - dvrp support for neck added
110	# 28/02/07 - Siggi - empty lines in configuration file are accepted
111	# mrun_path replaced by PALM_BIN,
112	# all machines are calling interpret_config.x
113
114
115
116
117	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
118
119	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
120	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
121	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
122
123	AddFilenames=""
124	additional_conditions=""
125	add_source_path=""
126	afname=""
127	archive_save=true
128	archive_system=none
129	compiler_name=""
130	cond1=""
131	cond2=""
132	config_file=.mrun.config
133	cpp_opts=""
134	cpumax=0
135	cpurest=0
136	delete_temporary_catalog=true
137	do_batch=false
138	do_compile=true
139	do_remote=false
140	do_stagein=true
141	do_stageout=true
142	do_trace=false
143	email_notification=""
144	exclude=""
145	executable=""
146	execution_error=false
147	filetransfer_protocol=""
148	fname=test
149	fromhost=""
150	host=""
151	host_file=""
152	hp=""
153	ignore_archive_error=false
154	input_list=""
155	interpreted_config_file=""
156	job_on_file=""
157	keep_data_from_previous_run=false
158	localhost_realname=$(hostname)
159	local_compile=false
160	locat=normal
161	mainprog=""
162	makefile=""
163	mc=$0
164	while [[ $(echo $mc \| grep -c "/") != 0 ]]
165	do
166	mc=`echo $mc \| cut -f2- -d"/"`
167	done
168	module_files=""
169	MODULE_OPTIONS=""
170	mrun_script_name=$mc
171	netcdf_support=false
172	node_usage=default
173	numprocs=""
174	OOPT=""
175	openmp=false
176	output_list=""
177	package_list=""
178	punkte="..........................................................."
179	queue=none
180	read_from_config=""
181	restart_run=false
182	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
183	if [[ $return_addres = 130.75.105.158 ]]
184	then
185	return_addres=172.20.25.41
186	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
187	fi
188	# if [[ $return_addres = 210.117.65.1 ]]
189	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
190	# then
191	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
192	# fi
193	return_password=""
194	return_username=$LOGNAME
195	remotecall=false
196	remote_username=""
197	run_mode=""
198	scirocco=false
199	store_on_archive_system=true
200	striche=" ----------------------------------------------------------------------------"
201	silent=false
202	source_list=""
203	source_path=SOURCE
204	tasks_per_node=""
205	threads_per_task=1
206	tmpcreate=false
207	tmp_data_catalog=""
208	transfer_problems=false
209	usern=$LOGNAME
210	use_makefile=""
211	working_directory=`pwd`
212	TOPT=""
213	XOPT=""
214	zeit=$( date \| cut -c 12-19 )
215
216	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
217	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
218
219	typeset -R40 calltime
220	typeset -L20 spalte1
221	typeset -L40 spalte2
222	typeset -L60 spalte3
223	typeset -L35 string1=`date`
224	typeset -L12 string2=$usern
225	typeset -L12 string3=$localhost_realname
226	typeset -L12 string4
227	typeset -L12 string5
228	typeset -L20 version="MRUN 1.8"
229
230
231
232	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
233	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
234
235	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
236	# EXPORTIERT WERDEN
237	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
238	export input_list memory numprocs output_list queue run_mode
239
240
241
242	# FEHLERBEHANDLUNG
243	# BEI EXIT:
244	trap 'if [[ $locat != localhost ]]
245	then
246	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
247	# then
248	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
249	#MRUN-calls on $localhost
250	#
251	#date and time user localhost remotehost termination mrun-command
252	#--------------------------------------------------------------------------------------------------------------------
253	#%STATEND%
254	# chmod 666 ${mrun_path}/statistik/mrun_statistik
255	# fi
256	#
257	# # EINTRAG IN DIE STATISTIK-DATEI
258	# string4=$host
259	# string5=$locat
260	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
261	# then
262	# if [[ $do_batch = true ]]
263	# then
264	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
265	# else
266	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
267	# fi
268	# fi
269	continue
270	fi
271
272	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
273	then
274
275	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
276	(( i = 0 ))
277	while (( i < iec ))
278	do
279	(( i = i + 1 ))
280	printf "\n *** Execution of ERROR-command:\n"
281	printf " >>> ${err_command[$i]}\n"
282	eval ${err_command[$i]}
283	done
284	if [[ -n $interpreted_config_file ]] then
285	rm -rf $interpreted_config_file
286	fi
287	if [[ $tmpcreate = true ]]
288	then
289	printf "\n *** Contents of \"$TEMPDIR\":\n"
290	ls -al; cd
291	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
292	fi
293	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
294	then
295	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
296	fi
297	printf "\n\n+++ MRUN killed \n\n"
298	elif [[ $locat != control_c ]]
299	then
300	printf "\n\n --> all actions finished\n\n"
301	printf " Bye, bye $usern !!\n\n"
302	fi' exit
303
304
305	# BEI TERMINAL-BREAK:
306	trap '[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
307	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
308	then
309	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
310	fi
311	printf "\n+++ MRUN killed by \"^C\" \n\n"
312	locat=control_c
313	exit
314	' 2
315
316
317	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
318	# BEEN SET
319	if [[ "$PALM_BIN" = "" ]]
320	then
321	printf "\n +++ environment variable PALM_BIN has not been set"
322	printf "\n please set it to the directory where the PALM scripts are located"
323	locat=palm_bin; exit
324	fi
325
326
327	# EVTL. NAMEN DES LOKALEN RECHNERS MIT UEBERGREIFENDEM NAMEN VERSEHEN
328	case $localhost_realname in
329	(atmos) localhost=lcide;;
330	(bora\|breva\|elephanta\|gallego\|gregale\|hababai\|irifi\|levanto\|maestro\|orkan\|ostria\|poniente\|quanero\|scirocco\|vorias) localhost=lcmuk;;
331	(breg-en0\|berni-en0) localhost=ibmb; archive_system=tivoli;;
332	(cs*) localhost=nech; archive_system=ut;;
333	(gate\|n-sx) PATH=$MRUN_BIN:$PATH:/usr/bin/nqsII; localhost=neck;;
334	(ground.yonsei.ac.kr) localhost=decalpha;;
335	(gfdl3.yonsei.ac.kr) localhost=decalpha;;
336	(gfdl5) localhost=ibmy;;
337	(hreg-en0\|hanni-en0) localhost=ibmh; archive_system=tivoli;;
338	(nobel*) localhost=ibms;;
339	(sun1\|sun2) localhost=unics;;
340	(tgg*) localhost=lctit;;
341	(*) printf "\n +++ Host \"$localhost_realname\" not admitted for mrun \n"
342	locat=localhost; exit;;
343	esac
344
345	[[ $localhost_realname = scirocco ]] && scirocco=true
346
347
348
349	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
350	# FUER FOLGEJOBS BENOETIGT WIRD
351	while getopts :a:AbBc:Cd:D:f:Fh:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
352	do
353	case $option in
354	(a) afname=$OPTARG;;
355	(A) store_on_archive_system=false; mc="$mc -A";;
356	(b) do_batch=true; mc="$mc -b";;
357	(B) delete_temporary_catalog=false; mc="$mc -B";;
358	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
359	(C) restart_run=true; mc="$mc -C";;
360	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
361	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
362	(f) filetransfer_protocol=$OPTARG; mc="$mc -f$OPTARG";;
363	(F) job_on_file="-D"; mc="$mc -F";;
364	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
365	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
366	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
367	(I) ignore_archive_error=true; mc="$mc -I";;
368	(k) keep_data_from_previous_run=true; mc="$mc -k";;
369	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
370	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
371	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
372	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
373	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
374	(O) use_openmp=true; mc="$mc -O";;
375	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
376	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
377	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
378	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
379	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
380	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
381	(S) read_from_config=false; mc="$mc -S";;
382	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
383	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
384	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
385	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
386	(v) silent=true; mc="$mc -v";;
387	(x) do_trace=true;set -x; mc="$mc -x";;
388	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
389	(\?) printf "\n +++ unknown option $OPTARG \n"
390	printf "\n --> type \"$0 ?\" for available options \n"
391	locat=parameter;exit;;
392	esac
393	done
394
395
396	# EVTL. POSITIONSPARAMETER EINLESEN
397	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
398	shift OPTIND-1
399
400
401	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
402	if [[ "$1" = "?" ]]
403	then
404	(printf "\n *** mrun can be called as follows:\n"
405	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
406	printf "\n Description of available options:\n"
407	printf "\n Option Description Default-Value"
408	printf "\n -a base name of input files equiv. -d"
409	printf "\n -A no archiving when using file-attribute fl"
410	printf "\n -b batch-job on local machine ---"
411	printf "\n -B do not delete temporary directory at end ---"
412	printf "\n -c configuration file .mrun.config"
413	printf "\n -d base name of files attached to program test"
414	printf "\n -D preprocessor(cpp)-directives \"\" "
415	printf "\n -f filetransfer protocol (ftp or scp) depending on -h"
416	printf "\n -F create remote job file only ---"
417	printf "\n -h execution host $localhost_realname"
418	printf "\n -i INPUT control list \"\" "
419	printf "\n -I archiving errors of previous batch-jobs"
420	printf "\n will be ignored"
421	printf "\n -k keep data from previous run"
422	printf "\n -K additional conditions for controling"
423	printf "\n usage of conditional code and"
424	printf "\n env-variables in configuration file \"\" "
425	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
426	printf "\n -M Makefile name Makefile"
427	printf "\n -n node usage (shared/not_shared) depending on -h"
428	printf "\n -o OUTPUT control list \"\" "
429	printf "\n -O use OpenMP ---"
430	printf "\n -p software package list \"\" "
431	printf "\n -q queue \"$queue\" "
432	printf "\n -r run control list (combines -i -o) \"\" "
433	printf "\n -s filenames of routines to be compiled \"\" "
434	printf "\n must end with .f, .f90, .F, or .c !"
435	printf "\n use \"..\" for more than one file and wildcards"
436	printf "\n -s TEST compiles all files with w-permit"
437	printf "\n -S config file interpreted by shellscript ---"
438	printf "\n -t allowed cpu-time in seconds (batch) 0"
439	printf "\n -T tasks per node depending on -h"
440	printf "\n -u username on remote machine \"\" "
441	printf "\n -v no prompt for confirmation ---"
442	printf "\n -x tracing of mrun for debug purposes ---"
443	printf "\n -X # of processors (on parallel machines) 1"
444	printf "\n "
445	printf "\n Possible values of positional parameter <modus>:"
446	printf "\n \"?\" - this outline \n\n") \| more
447	exit
448	elif [[ "$1" != "" ]]
449	then
450	printf "\n +++ positional parameter $1 unknown \n"
451	locat=parameter; exit
452	fi
453
454
455
456	# KURZE STARTMELDUNG
457	printf "\n*** $version "
458	printf "\n will be executed. Please wait ..."
459
460
461	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
462	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
463	[[ "$afname" = "" ]] && afname=$fname
464
465
466	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
467	if [[ "$run_mode" != "" ]]
468	then
469	input_list="$input_list $run_mode"
470	output_list="$output_list $run_mode"
471	fi
472
473
474	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
475	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
476	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
477	# STARTET)
478	if [[ "$fromhost" = "" ]]
479	then
480	fromhost=$localhost
481	fi
482
483
484	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
485	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
486	then
487	source_list=TEST
488	local_compile=true
489	host=$localhost
490	fi
491
492
493	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
494	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
495	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
496	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
497	if [[ -n $host && "$host" != $localhost ]]
498	then
499	do_batch=true
500	do_remote=true
501	case $host in
502	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
503	(*) printf "\n"
504	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
505	printf "\n or NQS not available on execution host!"
506	locat=nqs; (( iec = 0 )); exit;;
507	esac
508	else
509	host=$localhost
510	fi
511
512
513	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
514	if [[ -n $additional_conditions ]]
515	then
516	echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
517	# cond1=`echo $additional_conditions \| cut -d" " -f1`
518	# cond2=`echo $additional_conditions \| cut -d" " -s -f2`
519	# dummy=`echo $additional_conditions \| cut -d" " -s -f3`
520	if [[ -n $dummy ]]
521	then
522	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
523	locat=options; exit
524	fi
525	fi
526
527
528	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
529	# ARCHIVIERUNG FEHLGESCHLAGEN IST
530	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
531	then
532	if [[ $ignore_archive_error = false ]]
533	then
534	printf "\n +++ data archiving of previous run failed"
535	printf "\n see directory \~/job_queue on remote machine"
536	locat=archive; exit
537	else
538	printf "\n +++ warning: data archiving in a previous run failed"
539	printf "\n MRUN continues, trying to get backup copy"
540	fi
541	fi
542
543
544	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
545	if [[ ! -f $config_file ]]
546	then
547	printf "\n\n +++ configuration file: "
548	printf "\n $config_file"
549	printf "\n does not exist"
550	locat=connect; exit
551	fi
552
553
554
555	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
556	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
557	if [[ "$read_from_config" = false ]]
558	then
559
560	[[ $silent = false ]] && printf "\n Reading the configuration file... "
561	while read zeile
562	do
563	[[ $silent = false ]] && printf "."
564
565
566	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
567	# ERSETZEN
568	eval zeile=\"$zeile\"
569
570
571	# INTERPRETATION DER ZEILE
572	if [[ "$(echo $zeile)" = "" ]]
573	then
574	# LEERZEILE, KEINE AKTION
575	continue
576
577	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
578	then
579
580	# ZEILE IST KOMMENTARZEILE
581	true
582
583	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
584	then
585
586	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
587	zeile=$(echo $zeile \| cut -c2-)
588	echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
589	# var=`echo $zeile \| cut -d" " -f1`
590	# value=`echo $zeile \| cut -d" " -s -f2`
591	# for_host=`echo $zeile \| cut -d" " -s -f3`
592	# for_cond1=`echo $zeile \| cut -d" " -s -f4`
593	# for_cond2=`echo $zeile \| cut -d" " -s -f5`
594
595	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
596	then
597
598	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
599	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
600	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
601
602
603	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
604	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
605	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
606	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
607	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
608	# KONFIGURATIONSDATEI
609	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
610	then
611	eval $var=\$value
612
613	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
614	if [[ $do_trace = true ]]
615	then
616	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
617	fi
618	fi
619
620	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
621	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
622	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
623	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
624	if [[ $var = host ]]
625	then
626	if [[ -n $host && "$host" != $localhost ]]
627	then
628	do_batch=true
629	do_remote=true
630	case $host in
631	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
632	(*) printf "\n +++ no queueing system available on execution host \"$host\""
633	locat=nqs; exit;;
634	esac
635	else
636	host=$localhost
637	fi
638	fi
639
640	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
641	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
642	# DEN PROGRAMMEN BENOETIGT WERDEN
643	export $var
644	fi
645
646
647
648
649	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
650	then
651
652	# ZEILE DEFINIERT ERROR-KOMMANDO
653	(( iec = iec + 1 ))
654	zeile=$(echo $zeile \| cut -c4-)
655	err_command[$iec]="$zeile"
656
657	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
658	then
659
660	# ZEILE DEFINIERT INPUT-KOMMANDO
661	(( iic = iic + 1 ))
662	zeile=$(echo $zeile \| cut -c4-)
663	in_command[$iic]="$zeile"
664
665	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
666	then
667
668	# ZEILE DEFINIERT OUTPUT-KOMMANDO
669	(( ioc = ioc + 1 ))
670	zeile=$(echo $zeile \| cut -c4-)
671	out_command[$ioc]="$zeile"
672
673	else
674
675	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
676	# s2a: in/out - Feld
677	# s2b: loc - Feld (optional)
678	# s2c: tr/ar - Feld (optional)
679	echo $zeile \| cut -d" " -f1-2 \| read s1 s2
680	# s1=`echo $zeile \| cut -d" " -f1`
681	# s2=`echo $zeile \| cut -d" " -s -f2`
682	s2a=$(echo $s2 \| cut -d":" -f1)
683	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
684	then
685	s2b=""
686	s2c=""
687	else
688	echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
689	# s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
690	# s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
691	fi
692	echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
693	# s3=`echo $zeile \| cut -d" " -f3`
694	# s4=`echo $zeile \| cut -d" " -s -f4`
695	# s5=`echo $zeile \| cut -d" " -s -f5`
696	# s6=`echo $zeile \| cut -d" " -s -f6`
697
698
699	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
700	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
701	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
702	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
703	# HANDEN SEIN MUSS (D.H. s2b = loc)
704	IFSALT="$IFS"; IFS="$IFS:"
705	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
706	then
707	found=false
708	for actual in $input_list
709	do
710	for formal in $s3
711	do
712	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
713	done
714	done
715	if [[ $found = true ]]
716	then
717	(( iin = iin + 1 ))
718	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
719	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
720	extin[$iin]=$s6
721	fi
722	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
723	then
724	found=false
725	for actual in $output_list
726	do
727	for formal in $s3
728	do
729	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
730	done
731	done
732	if [[ $found = true ]]
733	then
734	(( iout = iout + 1 ))
735	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
736	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
737	fi
738	elif [[ "$s2a" != in && "$s2a" != out ]]
739	then
740	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
741	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
742	locat=connect; exit
743	fi
744	IFS="$IFSALT"
745	fi
746	done < $config_file
747
748	else
749
750
751	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
752	[[ $silent = false ]] && printf "..."
753	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
754	export interpreted_config_file=.icf.$RANDOM
755
756	# case $localhost_realname in
757	# (caurus\|twister) interpret_config.hp;;
758	# (bora\|breva\|elephanta\|gallego\|gregale\|hababai\|maestro\|orkan\|ostria) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel_ifc/8.1/lib/; interpret_config_9.x;;
759	# (levanto\|vorias) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/muksoft/packages/intel/ifort/9.1.037/lib/; interpret_config_9.x_levanto;;
760	# (quanero) export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel_fc_80/lib; interpret_config_9.x;;
761	# (*) interpret_config.x;;
762	# esac
763
764	interpret_config.x
765
766	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
767	chmod u+x $interpreted_config_file
768	export PATH=$PATH:.
769	. $interpreted_config_file
770	rm $interpreted_config_file
771
772	fi
773
774
775	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
776	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
777	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
778	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
779	if [[ "$SOURCES_COMPLETE" = "" ]]
780	then
781
782	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
783	# VEREINBART WURDE
784	source_path=""
785	line=""
786	grep "%source_path" $config_file > tmp_mrun
787	while read line
788	do
789	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
790	then
791	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
792	then
793	global_source_path=`echo $line \| cut -d" " -f2`
794	fi
795	fi
796	done < tmp_mrun
797
798	line=""
799	found=false
800	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
801	while read line
802	do
803	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
804	then
805	if [[ $found = true ]]
806	then
807	printf "\n\n +++ more than one source path found in configuration file"
808	printf "\n for local host \"$localhost\" "
809	locat=source_path; exit
810	fi
811	source_path=`echo $line \| cut -d" " -f2`
812	found=true
813	fi
814	done < tmp_mrun
815	rm tmp_mrun
816
817	if [[ "$source_path" = "" ]]
818	then
819	if [[ "$global_source_path" != "" ]]
820	then
821	source_path=$global_source_path
822	else
823	printf "\n\n +++ no source path found in configuration file"
824	printf "\n for local host \"$localhost\" "
825	locat=source_path; exit
826	fi
827	fi
828	eval source_path=$source_path
829
830	if [[ ! -d $source_path ]]
831	then
832	printf "\n\n +++ source path \"$source_path\" on local host"
833	printf "\n \"$localhost\" does not exist"
834	locat=source_path; exit
835	fi
836
837	fi
838
839
840
841	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
842	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
843	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
844	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
845	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
846	if [[ -n $host && "$host" != $localhost ]]
847	then
848	do_batch=true
849	do_remote=true
850	case $host in
851	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
852	(*) printf "\n"
853	printf "\n +++ execution host \"$host\" not admitted for MRUN,"
854	printf "\n or no queueing system available on execution host!"
855	locat=nqs; (( iec = 0 )); exit;;
856	esac
857	else
858	host=$localhost
859	fi
860
861
862	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
863	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
864	then
865
866	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
867	if [[ ! -n $numprocs ]]
868	then
869	printf "\n"
870	printf "\n +++ option \"-K parallel\" requires additional specification"
871	printf "\n of the number of processors to be used by"
872	printf "\n mrun-option \"-X\" or by environment-variable"
873	printf "\n \"numprocs\" in the configuration file"
874	locat=numprocs; (( iec = 0 )); exit
875	fi
876
877	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
878	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
879	# GESAMTPROZESSORANZAHL IST
880	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
881	then
882	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
883	(( ival = $tasks_per_node ))
884	(( pes = numprocs ))
885	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
886	# then
887	# (( pes = pes - 1 ))
888	# fi
889	(( ii = pes / ival ))
890	if (( pes - ii * ival > 0 ))
891	then
892	printf "\n"
893	printf "\n +++ tasks per node (option \"-T\") must be an integral"
894	printf "\n divisor of the total number of processors (option \"-X\")"
895	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
896	locat=tasks_per_node; (( iec = 0 )); exit
897	fi
898	fi
899
900	# IBMY HAT NUR EINEN KNOTEN
901	if [[ $host = ibmy ]]
902	then
903	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
904	then
905	printf "\n"
906	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
907	printf "\n total number of processors (option \"-X\")"
908	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
909	locat=tasks_per_node; (( iec = 0 )); exit
910	fi
911	fi
912
913	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
914	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
915	if [[ $use_openmp = true ]]
916	then
917	threads_per_task=$tasks_per_node
918	tasks_per_node=1
919	fi
920	OOPT="-O $threads_per_task"
921	TOPT="-T $tasks_per_node"
922
923	# GESAMTZAHL DER KNOTEN BESTIMMEN
924	if [[ "$tasks_per_node" != "" ]]
925	then
926	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
927	fi
928
929	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
930	# SETZEN
931	if [[ $node_usage = default ]]
932	then
933	if [[ $host = ibms ]]
934	then
935	node_usage=shared
936	else
937	node_usage=not_shared
938	fi
939	fi
940	if [[ $node_usage != shared && $node_usage != not_shared ]]
941	then
942	printf "\n"
943	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
944	printf "\n \"shared\" or \"not_shared\""
945	locat=tasks_per_node; (( iec = 0 )); exit
946	fi
947
948	fi
949
950	# PRUEFEN, OB HOSTFILE EXISTIERT
951	if [[ -n $hostfile ]]
952	then
953	if [[ ! -f $hostfile ]]
954	then
955	printf "\n"
956	printf "\n +++ hostfile \"$hostfile\" does not exist"
957	locat=hostfile; exit
958	fi
959	fi
960
961	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
962	if [[ $host = ibmy && $do_remote = false ]]
963	then
964	if [[ ! -f $HOME/.rhosts ]]
965	then
966	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
967	printf "\n\n *** file:"
968	printf "\n $HOME/.rhosts"
969	printf "\n was created\n"
970	fi
971	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
972	then
973	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
974	printf "\n\n *** file:"
975	printf "\n $HOME/.rhosts"
976	printf "\n was extended by the name of the current host\n"
977	fi
978	fi
979
980	# DEFAULT-DATEITRANSFER-PROTOKOLL FESTLEGEN
981	if [[ "$filetransfer_protocol" = "" ]]
982	then
983	case $host in
984	(nech\|neck\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit) filetransfer_protocol=scp;;
985	(*) filetransfer_protocol=ftp;;
986	esac
987	fi
988
989	# PRUEFEN, OB ZULAESSIGES DATEITRANSFER-PROTOKOLL GEWAEHLT WURDE
990	if [[ "$filetransfer_protocol" != ftp && "$filetransfer_protocol" != scp ]]
991	then
992	printf "\n"
993	printf "\n +++ illegal value \"$filetransfer_protocol\" for Option -f"
994	printf "\n only \"ftp\" or \"scp\" are allowed"
995	locat=options; exit
996	fi
997
998
999	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1000	if [[ $queue = none ]]
1001	then
1002	case $host in
1003	(ibmb) if [[ $node_usage = shared ]]
1004	then
1005	queue=cshare
1006	else
1007	queue=csolo
1008	fi;;
1009	(ibmh) if [[ $node_usage = shared ]]
1010	then
1011	queue=cshare
1012	else
1013	queue=csolo
1014	fi;;
1015	(ibmy) queue=parallel;;
1016	(lctit) queue=default;;
1017	(nech) queue=none;;
1018	(neck) queue=P;;
1019	(unics) queue=unics;;
1020	esac
1021	fi
1022
1023
1024	# EVTL. NETCDF-UNTERSTUETZUNG SETZEN
1025	case $host in
1026	(decalpha) netcdf_support=true
1027	netcdf_path=/usr/local/netcdf-3.5.1;;
1028	(ibmb\|ibmh) netcdf_support=true
1029	netcdf_path=/aws/dataformats/netcdf-3.6.0-p1/64-32;;
1030	(ibms) netcdf_support=true
1031	netcdf_path=/applic/lib/NETCDF64;;
1032	(ibmy) netcdf_support=true
1033	netcdf_path=/usr1/users/raasch/pub/netcdf-3.6.0-p1;;
1034	(lcmuk) netcdf_support=true
1035	if [[ $scirocco = true ]]
1036	then
1037	netcdf_path=/opt/netcdf/3.6.2-beta4
1038	else
1039	netcdf_path=/muksoft/packages/netcdf/linux
1040	fi;;
1041	(lctit) netcdf_support=true
1042	netcdf_path=/home2/usr5/mkanda/netcdf-3.6.1;;
1043	(nech) netcdf_support=true
1044	netcdf_path=/pool/SX-6/netcdf/netcdf-3.6.0-p1;;
1045	(neck) netcdf_support=true
1046	netcdf_path=/home/DSRC/NC/tatuyama/pub/netcdf-3.6.0-p1;;
1047	esac
1048
1049
1050	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1051	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1052	# ERMITTELN
1053	(( i = 0 ))
1054	while (( i < iin ))
1055	do
1056	(( i = i + 1 ))
1057	(( maxcycle = 0 ))
1058
1059	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1060	if [[ "${actionin[$i]}" = di ]]
1061	then
1062	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1063	# REM-MASCHINE AUSWERTEN
1064	eval filename=${pathin[$i]}/${endin[$i]}
1065	else
1066	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1067	# REM-MASCHINE AUSWERTEN
1068	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1069	fi
1070
1071	# PRUEFEN AUF VORHANDENSEIN
1072	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1073	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1074	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1075	then
1076	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1077	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1078	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1079	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1080	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1081	if [[ "${transin[$i]}" != "locopt" ]]
1082	then
1083	printf "\n\n +++ INPUT-file: "
1084	if [[ "${extin[$i]}" = "" ]]
1085	then
1086	printf "\n $filename"
1087	else
1088	printf "\n $filename.${extin[$i]}"
1089	fi
1090	printf "\n does not exist\n"
1091	locat=input; exit
1092	else
1093	transin[$i]="unavailable"
1094	fi
1095	else
1096
1097	# ZYKLUSNUMMER FESTSTELLEN
1098	ls -1 -d $filename > filelist 2>/dev/null
1099	ls -1 -d $filename.* >> filelist 2>/dev/null
1100	while read zeile
1101	do
1102	cycle=$(print $zeile \| cut -f2 -d".")
1103	if [[ "$cycle" = "$zeile" ]]
1104	then
1105	(( icycle = 0 ))
1106	elif [[ "$cycle" = "${extin[$i]}" ]]
1107	then
1108	(( icycle = 0 ))
1109	else
1110	(( icycle = $cycle ))
1111	fi
1112	if (( icycle > maxcycle ))
1113	then
1114	(( maxcycle = icycle ))
1115	file_to_be_used=$zeile
1116	fi
1117	done <filelist
1118	rm filelist
1119
1120	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1121	if (( maxcycle > 0 ))
1122	then
1123	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1124	then
1125	filename=${filename}.$maxcycle.${extin[$i]}
1126	else
1127	filename=${filename}.$maxcycle
1128	fi
1129	else
1130	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1131	then
1132	filename=${filename}.${extin[$i]}
1133	fi
1134	fi
1135
1136	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1137	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1138	absnamein[$i]=$filename
1139	if (( maxcycle > 0 ))
1140	then
1141	if [[ "${actionin[$i]}" = di ]]
1142	then
1143	frelin[$i]=${endin[$i]}.$maxcycle
1144	else
1145	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1146	fi
1147	else
1148	if [[ "${actionin[$i]}" = di ]]
1149	then
1150	frelin[$i]=${endin[$i]}
1151	else
1152	frelin[$i]=${afname}${endin[$i]}
1153	fi
1154	fi
1155
1156	fi
1157	done
1158
1159
1160	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1161	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1162	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1163	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1164	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1165	(( i = 0 ))
1166	while (( i < iout ))
1167	do
1168	(( i = i + 1 ))
1169	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1170	then
1171	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1172	then
1173	actionout[$i]=""
1174	elif [[ "${actionout[$i]}" = tra ]]
1175	then
1176	actionout[$i]=a
1177	fi
1178	(( maxcycle = 0 ))
1179	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1180	eval catalogname=${pathout[$i]}
1181	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1182	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1183	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1184	then
1185
1186	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1187	if cat /dev/null > $filename
1188	then
1189	rm $filename
1190	else
1191
1192	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1193	if [[ ! -d $catalogname ]]
1194	then
1195	if mkdir -p $catalogname
1196	then
1197	printf "\n\n *** directory:"
1198	printf "\n $catalogname"
1199	printf "\n was created\n"
1200	else
1201	printf "\n\n +++ OUTPUT-file:"
1202	printf "\n $filename"
1203	printf "\n cannot be created, because directory does not exist"
1204	printf "\n and cannot be created either"
1205	printf "\n"
1206	locat=output ; exit
1207	fi 2>/dev/null
1208	else
1209	printf "\n\n +++ OUTPUT-file:"
1210	printf "\n $filename"
1211	printf "\n cannot be created, although directory exists"
1212	printf "\n"
1213	locat=output ; exit
1214	fi
1215	fi 2>/dev/null
1216	else
1217
1218	# ZYKLUSNUMMER FESTSTELLEN
1219	ls -1 -d $filename > filelist 2>/dev/null
1220	ls -1 -d $filename.* >> filelist 2>/dev/null
1221	while read zeile
1222	do
1223	cycle=$(print $zeile \| cut -f2 -d".")
1224	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1225	then
1226	(( icycle = 1 ))
1227	else
1228	(( icycle = $cycle + 1 ))
1229	fi
1230	if (( icycle > maxcycle ))
1231	then
1232	(( maxcycle = icycle ))
1233	fi
1234	done <filelist
1235	rm filelist
1236	fi
1237
1238	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1239	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1240	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1241	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1242	if [[ "${actionout[$i]}" != a ]]
1243	then
1244	if (( maxcycle > 0 ))
1245	then
1246	filename=${filename}.$maxcycle
1247	if cat /dev/null > $filename
1248	then
1249	rm $filename
1250	else
1251	printf "\n +++ OUTPUT-file:"
1252	printf "\n $filename"
1253	printf "\n cannot be created"
1254	locat=output ; exit
1255	fi
1256	fi
1257	else
1258	(( maxcycle = maxcycle - 1 ))
1259	if (( maxcycle > 0 ))
1260	then
1261	filename=${filename}.$maxcycle
1262	fi
1263	fi
1264
1265	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1266	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1267	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1268	pathout[$i]=$filename
1269	if (( maxcycle > 0 ))
1270	then
1271	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1272	else
1273	frelout[$i]=${fname}${endout[$i]}
1274	fi
1275
1276	fi
1277	done
1278
1279
1280	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1281	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1282	# UEBERSETZT ZU WERDEN)
1283	if [[ "$mainprog" = "" && "$executable" = "" ]]
1284	then
1285	printf "\n +++ neither main program nor executable defined"
1286	locat=source; exit
1287	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1288	then
1289	printf "\n +++ main program as well as executable defined"
1290	locat=source; exit
1291	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1292	then
1293	do_compile=false
1294	fi
1295
1296
1297	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1298	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1299	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1300	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1301	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1302	then
1303
1304	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1305	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1306
1307	if [[ $restart_run != true ]]
1308	then
1309	rm -rf SOURCES_FOR_RUN_$fname
1310	mkdir SOURCES_FOR_RUN_$fname
1311	fi
1312
1313
1314	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1315	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1316	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1317	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1318	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1319	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1320	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1321	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1322	# GESAMMELT
1323	if [[ "$source_list" = WRITE_PERMIT ]]
1324	then
1325
1326	source_list=""
1327	cd $source_path
1328
1329
1330	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1331	Names=$(ls -1 *.f90 2>&1)
1332	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1333	Names=$(ls -1 *.F90 2>&1)
1334	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1335	Names=$(ls -1 *.F 2>&1)
1336	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1337	Names=$(ls -1 *.f 2>&1)
1338	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1339	Names=$(ls -1 *.c 2>&1)
1340	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1341
1342
1343	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1344	for dateiname in $Filenames
1345	do
1346	if [[ -w $dateiname ]]
1347	then
1348	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1349	then
1350	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1351	source_list=$source_list"$dateiname "
1352	fi
1353	fi
1354	done
1355
1356	cd - > /dev/null
1357
1358
1359	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1360	then
1361
1362	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1363	source_list=""
1364	cd $source_path
1365
1366
1367	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1368	if [[ ! -d .svn ]]
1369	then
1370	printf "\n\n +++ source directory"
1371	printf "\n \"$source_path\" "
1372	printf "\n is not under control of \"subversion\"."
1373	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1374	fi
1375
1376
1377	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1378	Filenames=""
1379	svn status \| while read line
1380	do
1381	firstc=`echo $line \| cut -c1`
1382	if [[ $firstc = M \|\| $firstc = "?" ]]
1383	then
1384	Name=`echo "$line" \| cut -c8-`
1385	extension=`echo $Name \| cut -d. -f2`
1386	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1387	then
1388	Filenames="$Filenames "$Name
1389	fi
1390	fi
1391	done
1392
1393
1394	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1395	for dateiname in $Filenames
1396	do
1397	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1398	source_list=$source_list"$dateiname "
1399	done
1400
1401	cd - > /dev/null
1402
1403
1404	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1405	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1406	# VORHANDEN
1407	elif [[ "$source_list" != "" && $restart_run != true ]]
1408	then
1409
1410	cd $source_path
1411
1412	for filename in $source_list
1413	do
1414
1415	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1416	if [[ $(print $filename \| grep -c "/") != 0 ]]
1417	then
1418	printf "\n +++ source code file: $filename"
1419	printf "\n must not contain (\"/\") "
1420	locat=source; exit
1421	fi
1422
1423	if [[ ! -f $filename ]]
1424	then
1425	printf "\n +++ source code file: $filename"
1426	printf "\n does not exist"
1427	locat=source; exit
1428	else
1429	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1430	fi
1431
1432	done
1433
1434	cd - > /dev/null
1435
1436	fi
1437
1438
1439	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1440	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1441	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1442	if [[ $restart_run != true ]]
1443	then
1444
1445	if [[ ! -f "$source_path/$mainprog" ]]
1446	then
1447	printf "\n\n +++ main program: $mainprog"
1448	printf "\n does not exist in source directory"
1449	printf "\n \"$source_path\"\n"
1450	locat=source; exit
1451	else
1452	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1453	then
1454	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1455	source_list=${mainprog}" $source_list"
1456	fi
1457	fi
1458	fi
1459
1460
1461	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1462	if [[ $restart_run != true && "$add_source_path" != "" ]]
1463	then
1464
1465	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1466	if [[ ! -d $add_source_path ]]
1467	then
1468	printf "\n\n +++ WARNING: additional source code directory"
1469	printf "\n \"$add_source_path\" "
1470	printf "\n does not exist or is not a directory."
1471	printf "\n No source code will be used from this directory!\n"
1472	add_source_path=""
1473	sleep 3
1474	else
1475
1476	cd $add_source_path
1477
1478	Names=$(ls -1 *.f90 2>&1)
1479	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1480	Names=$(ls -1 *.F90 2>&1)
1481	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1482	Names=$(ls -1 *.F 2>&1)
1483	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1484	Names=$(ls -1 *.f 2>&1)
1485	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1486	Names=$(ls -1 *.c 2>&1)
1487	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1488
1489	cd - > /dev/null
1490	cd SOURCES_FOR_RUN_$fname
1491
1492	for dateiname in $AddFilenames
1493	do
1494	if [[ -f $dateiname ]]
1495	then
1496	printf "\n +++ source code file \"$dateiname\" found in additional"
1497	printf "\n source code directory \"$add_source_path\" "
1498	printf "\n as well as in directory \"$source_path\"."
1499	locat=source; exit
1500	fi
1501
1502	cp $add_source_path/$dateiname .
1503	source_list="$source_list $dateiname"
1504
1505	# Default User-Interface von der Liste entfernen, falls Datei
1506	# ein User-Interface enthaelt
1507	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1508	then
1509	if [[ -f user_interface.f90 ]]
1510	then
1511	rm -rf user_interface.f90
1512	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1513	printf "\n\n *** \"user_interface.f90\" removed from the files to be translated"
1514	printf "\n since a user-interface is found in file"
1515	printf "\n \"$add_source_path/$dateiname\" \n"
1516	sleep 3
1517	else
1518	printf "\n\n *** user-interface file \"$dateiname\" "
1519	printf "\n added to the files to be translated \n"
1520	sleep 3
1521	fi
1522	fi
1523	done
1524
1525	cd - > /dev/null
1526	fi
1527	fi
1528
1529
1530	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1531	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1532	if [[ $restart_run != true && -n $package_list ]]
1533	then
1534
1535	cd $source_path
1536
1537	for package in $package_list
1538	do
1539
1540	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1541
1542	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1543	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1544	# LIEFERT
1545	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1546
1547
1548	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1549	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1550	for source_list_name in $package_source_list
1551	do
1552	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1553	then
1554
1555	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1556	ending=`echo $source_list_name \| cut -f2 -d.`
1557	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1558	then
1559	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1560	source_list="$source_list $source_list_name"
1561	fi
1562	fi
1563	done
1564	done
1565
1566	cd - > /dev/null
1567	fi
1568
1569
1570	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1571	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1572	if [[ "$use_makefile" = true && "$restart_run" != true ]]
1573	then
1574	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1575	if [[ ! -f $makefile ]]
1576	then
1577	printf "\n +++ file \"$makefile\" does not exist"
1578	printf "\n provide this file or set \"use_makefile=false\" in configuration file\n"
1579	locat=make; exit
1580	else
1581	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1582	fi
1583	fi
1584
1585	fi # do_compile=true
1586
1587
1588	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1589	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1590	if [[ $do_compile = true ]]
1591	then
1592
1593	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1594	# ZUSAMMENSETZEN
1595	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1596	then
1597	PPOPTS=-Dibm=ibm
1598	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1599	then
1600	PPOPTS=-Dnec
1601	else
1602	PPOPTS=-D$localhost
1603	fi
1604	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1605	then
1606	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1=$cond1"
1607	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2=$cond2"
1608	if [[ $netcdf_support = true ]]
1609	then
1610	PPOPTS="$PPOPTS -Dnetcdf=netcdf"
1611	[[ $localhost != ibms ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit=netcdf_64bit"
1612	fi
1613	if [[ $localhost = ibmy ]]
1614	then
1615	PPOPTS="$PPOPTS -Dibmy_special=ibmy_special"
1616	fi
1617	else
1618	[[ -n $cond1 ]] && PPOPTS="$PPOPTS -D$cond1"
1619	[[ -n $cond2 ]] && PPOPTS="$PPOPTS -D$cond2"
1620	if [[ $netcdf_support = true ]]
1621	then
1622	PPOPTS="$PPOPTS -Dnetcdf"
1623	[[ $localhost != decalpha && $localhost != lctit ]] && PPOPTS="$PPOPTS -Dnetcdf_64bit"
1624	fi
1625	fi
1626	if [[ -n $package_list ]]
1627	then
1628	for package in $package_list
1629	do
1630	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1631	then
1632	if [[ $package != "dvrp_graphics+1PE" ]]
1633	then
1634	PPOPTS="$PPOPTS -D$package=$package"
1635	else
1636	PPOPTS="$PPOPTS -Ddvrp_graphics"
1637	export use_seperate_pe_for_dvrp_output=true
1638	fi
1639	else
1640	if [[ $package != "dvrp_graphics+1PE" ]]
1641	then
1642	PPOPTS="$PPOPTS -D$package"
1643	else
1644	PPOPTS="$PPOPTS -Ddvrp_graphics"
1645	export use_seperate_pe_for_dvrp_output=true
1646	fi
1647	fi
1648	done
1649	fi
1650	if [[ -n $cpp_opts ]]
1651	then
1652	for popts in $cpp_opts
1653	do
1654	PPOPTS="$PPOPTS -D$popts"
1655	done
1656	fi
1657
1658	# -D ARGUMENTEN EINEN DOPPELTEN UNTERSTRICH VORANSTELLEN
1659	PPOPTS=`echo " $PPOPTS" \| sed 's/ -D/ -D__/g'`
1660
1661	# OPTION ZUM EINSCHALTEN DES PRAEPROZESSORS HINZUFUEGEN
1662	if [[ $host = decalpha ]]
1663	then
1664	C_PPOPTS="-cpp -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION $PPOPTS"
1665	elif [[ $(echo $host \| cut -c1-3) = ibm ]]
1666	then
1667	# blanks in PPOPTS muessen durch "," ersetzt werden
1668	PPOPTS=`echo $PPOPTS \| sed 's/ -/,-/g'`
1669	C_PPOPTS="-qsuffix=cpp=f90 -WF,-DMPI_REAL=MPI_DOUBLE_PRECISION,$PPOPTS"
1670	elif [[ $host = lcmuk ]]
1671	then
1672	C_PPOPTS="$PPOPTS -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1673	elif [[ $host = lctit ]]
1674	then
1675	C_PPOPTS="$PPOPTS -Mpreprocess -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION"
1676	elif [[ $(echo $host \| cut -c1-3) = nec ]]
1677	then
1678	C_PPOPTS="-Ep -DMPI_REAL=MPI_REAL8 -DMPI_2REAL=MPI_2REAL8 -DSCFFT=dzfft -DCSFFT=zdfft $PPOPTS"
1679	else
1680	C_PPOPTS="$PPOPTS"
1681	fi
1682
1683	else
1684
1685
1686	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1687	if [[ $do_remote = false ]]
1688	then
1689	if [[ ! -f $executable ]]
1690	then
1691	printf "\n +++ executable file: $executable"
1692	printf "\n does not exist"
1693	locat=executable; exit
1694	fi
1695	fi
1696	fi
1697
1698
1699	# JOBMODUS FESTSTELLEN
1700	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1701	then
1702	jobmo=BATCH
1703	else
1704	jobmo=INTERACTIVE
1705	fi
1706
1707
1708	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1709	# DURCH BENUTZER ANDERWEITIG VEREINBART
1710	if [[ "$compiler_name" = "" ]]
1711	then
1712	case $localhost in
1713	(unics) compiler_name=f77;;
1714	(lcmuk) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1715	then
1716	compiler_name=mpif90
1717	else
1718	compiler_name=ifc
1719	fi;;
1720	(lctit) if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1721	then
1722	compiler_name=mpif90
1723	echo ">>> compiler=mpif90"
1724	else
1725	compiler_name=pgf95
1726	echo ">>> compiler=pgf95"
1727	fi;;
1728	(nech) compiler_name=sxmpif90;;
1729	(decalpha) compiler_name=f95;;
1730	(ibm\|ibmb\|ibmh\|ibms\|ibmy) compiler_name=mpxlf95_r;;
1731	(*) printf "\n +++ unknown host name: $localhost \n";
1732	locat=localhost; exit;;
1733	esac
1734	fi
1735
1736
1737	# COMPILER AUF NECK UEBERSCHREIBEN
1738	[[ $localhost = neck ]] && compiler_name=mpif90
1739
1740
1741
1742	# PRAEPROZESSOR-PFAD BESTIMMEN
1743	case $localhost in
1744	(decalpha\|ibm\|ibmb\|ibmh\|ibms\|ibmy\|unics) praeproc=cpp;;
1745	esac
1746
1747
1748	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1749	kennung=$RANDOM
1750	if [[ "$tmp_user_catalog" = "" ]]
1751	then
1752	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1753	then
1754	tmp_user_catalog=$TMPDIR
1755	elif [[ $localhost = nech ]]
1756	then
1757	tmp_user_catalog=$WRKSHR
1758	else
1759	tmp_user_catalog=/tmp
1760	fi
1761	fi
1762	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1763
1764
1765	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1766	# BESTIMMEN
1767	if [[ "$tmp_data_catalog" = "" ]]
1768	then
1769	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1770	then
1771	tmp_data_catalog=$WORK/mrun_restart_data
1772	elif [[ $localhost = nech ]]
1773	then
1774	tmp_data_catalog=$WRKSHR/mrun_restart_data
1775	else
1776	tmp_data_catalog=/tmp/mrun_restart_data
1777	fi
1778	fi
1779
1780
1781	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1782	# ERSETZEN
1783	if [[ $do_remote = false && $do_compile = true ]]
1784	then
1785	eval fopts=\"$fopts\"
1786	eval lopts=\"$lopts\"
1787	fi
1788
1789
1790
1791	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1792	FOPTS="$fopts"
1793	LOPTS="$lopts"
1794	ROPTS="$ropts"
1795	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
1796	then
1797	XOPT="-X $numprocs"
1798	fi
1799
1800
1801	# BEI VERWENDUNG VON DVRP-SOFTWARE MUSS ENTSPECHENDE GRAFIK-BIBLIOTHEK
1802	# MIT EINGEBUNDEN WERDEN
1803	if [[ -n $package_list ]]
1804	then
1805	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1806	then
1807
1808	# DVRP-GRAFIK GIBT ES NUR AUF DER IBM AM HLRN, AUF NECH/NECK UND
1809	# DEM NOTEBOOK SCIROCCO
1810	if [[ $host != ibmh && $host != nech && $host != neck && $host != lcmuk && "$local_compile" != true ]]
1811	then
1812	printf "\n"
1813	printf "\n +++ option -p with package \"dvrp_graphics\" only allowed on nech and ibmh"
1814	locat=parameter; exit
1815	fi
1816	if [[ $host = ibmh ]]
1817	then
1818	if [[ $cond1 = debug \|\| $cond2 = debug ]]
1819	then
1820	FOPTS="-I/home/h/hzazchmi/lib/debug $FOPTS"
1821	LOPTS="$LOPTS -L/home/h/hzazchmi/lib/debug -lDVRP2 -lftp"
1822	else
1823	FOPTS="-I/home/h/nikevita/lib_stable/optimize $FOPTS"
1824	LOPTS="$LOPTS -L/home/h/nikevita/lib_stable/optimize -lDVRP2 -lftp"
1825	fi
1826	elif [[ $host = nech ]]
1827	then
1828	FOPTS="-I/import/ds9b/ipf2/b/b323014/lib/optimize $FOPTS"
1829	LOPTS="$LOPTS -L/import/ds9b/ipf2/b/b323014/lib/optimize -lDVRP2 -lftp"
1830	elif [[ $host = neck ]]
1831	then
1832	FOPTS="-I/home/DSRC/NC/tatuyama/pub/dvrp $FOPTS"
1833	LOPTS="$LOPTS -L/home/DSRC/NC/tatuyama/pub/dvrp -lDVRP2 -lftp"
1834	elif [[ $host = lcmuk ]]
1835	then
1836	FOPTS="-I/usr/local/lib/dvrp/optimize $FOPTS"
1837	LOPTS="$LOPTS -L/usr/local/lib/dvrp/optimize -lDVRP2 -lftp"
1838	fi
1839	fi
1840	fi
1841
1842
1843	# EVTL. EINBINDEN DER NETCDF-BIBLIOTHEK
1844	if [[ $netcdf_support = true ]]
1845	then
1846	case $host in
1847	(decalpha) FOPTS="-I${netcdf_path}/include $FOPTS"
1848	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1849	(ibmb\|ibmh) FOPTS="-I ${netcdf_path}/include-64 $FOPTS"
1850	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1851	(ibms) FOPTS="-I /applic/netcdf64/src/f90 $FOPTS"
1852	LOPTS="$LOPTS -L${netcdf_path} -lnetcdf";;
1853	(ibmy) FOPTS="-I ${netcdf_path}/include $FOPTS"
1854	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1855	(lcmuk\|nech\|neck) FOPTS="-I ${netcdf_path}/include $FOPTS"
1856	LOPTS="$LOPTS -L${netcdf_path}/lib -lnetcdf";;
1857	(lctit) FOPTS="-I ${netcdf_path}/src/f90 $FOPTS"
1858	LOPTS="$LOPTS -L${netcdf_path}/src/libsrc -lnetcdf";;
1859
1860	esac
1861	fi
1862
1863	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1864	# GRAMM BENOETIGT
1865	done=false
1866	while [[ $done = false ]]
1867	do
1868	cputime=$cpumax
1869	if (( $cputime == 0 ))
1870	then
1871	printf "\n +++ cpu-time is undefined"
1872	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1873	printf "\n >>> "
1874	read cputime 1>/dev/null 2>&1
1875	else
1876	done=true
1877	fi
1878	cpumax=$cputime
1879	done
1880
1881	(( minuten = cputime / 60 ))
1882	(( sekunden = cputime - minuten * 60 ))
1883
1884
1885	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1886	if [[ $do_batch = true ]]
1887	then
1888	done=false
1889	while [[ $done = false ]]
1890	do
1891	if (( memory == 0 ))
1892	then
1893	printf "\n +++ memory demand is undefined"
1894	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1895	printf "\n >>> "
1896	read memory 1>/dev/null 2>&1
1897	else
1898	done=true
1899	fi
1900	done
1901	fi
1902
1903
1904	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1905	if [[ $do_remote = true && -z $remote_username ]]
1906	then
1907	while [[ -z $remote_username ]]
1908	do
1909	printf "\n +++ username on remote host \"$host\" is undefined"
1910	printf "\n >>> Please type username:"
1911	printf "\n >>> "
1912	read remote_username
1913	done
1914	mc="$mc -u$remote_username"
1915	fi
1916
1917	###########################################################################
1918	# HEADER-AUSGABE
1919	###########################################################################
1920
1921
1922	calltime=$(date)
1923	printf "\n"
1924	# [[ $silent = false ]] && clear
1925	printf "#--------------------------------------------------------------# \n"
1926	printf "\| $version$calltime \| \n"
1927	printf "\| \| \n"
1928	spalte1="called on:"; spalte2=$localhost_realname
1929	printf "\| $spalte1$spalte2 \| \n"
1930	if [[ $local_compile = false ]]
1931	then
1932	if [[ $do_remote = true ]]
1933	then
1934	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1935	else
1936	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1937	fi
1938	else
1939	spalte1="compiling test only!"; spalte2=""
1940	fi
1941	printf "\| $spalte1$spalte2 \| \n"
1942	if [[ -n $numprocs ]]
1943	then
1944	spalte1="number of PEs:"; spalte2=$numprocs
1945	printf "\| $spalte1$spalte2 \| \n"
1946	fi
1947	if [[ -n $tasks_per_node ]]
1948	then
1949	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1950	printf "\| $spalte1$spalte2 \| \n"
1951	fi
1952	if [[ $threads_per_task != 1 ]]
1953	then
1954	spalte1="threads per task:"; spalte2="$threads_per_task"
1955	printf "\| $spalte1$spalte2 \| \n"
1956	fi
1957	printf "\| \| \n"
1958	if [[ $do_compile = true ]]
1959	then
1960	spalte1=cpp-directives:; spalte2=$C_PPOPTS
1961	printf "\| $spalte1$spalte2 \| \n"
1962	zeile=$(echo "$C_PPOPTS" \| cut -c41-)
1963	while [[ "$zeile" != "" ]]
1964	do
1965	spalte1=""
1966	spalte2=$zeile
1967	printf "\| $spalte1$spalte2 \| \n"
1968	zeile=$(echo "$zeile" \| cut -c41-)
1969	done
1970
1971	spalte1=compiler-options:; spalte2="$FOPTS $MODULE_OPTIONS"
1972	printf "\| $spalte1$spalte2 \| \n"
1973	zeile=$(echo "$FOPTS $MODULE_OPTIONS" \| cut -c41-)
1974	while [[ "$zeile" != "" ]]
1975	do
1976	spalte1=""
1977	spalte2=$zeile
1978	printf "\| $spalte1$spalte2 \| \n"
1979	zeile=$(echo "$zeile" \| cut -c41-)
1980	done
1981
1982	spalte1=linker-options:; spalte2=$LOPTS
1983	printf "\| $spalte1$spalte2 \| \n"
1984	zeile=$(echo "$LOPTS" \| cut -c41-)
1985	while [[ "$zeile" != "" ]]
1986	do
1987	spalte1=""
1988	spalte2=$zeile
1989	printf "\| $spalte1$spalte2 \| \n"
1990	zeile=$(echo "$zeile" \| cut -c41-)
1991	done
1992
1993	spalte1="main program":; spalte2=$mainprog
1994	printf "\| $spalte1$spalte2 \| \n"
1995	if [[ "$use_makefile" = true ]]
1996	then
1997	spalte1="using \"make\" for com"; spalte2="piling and linking"
1998	printf "\| $spalte1$spalte2 \| \n"
1999	fi
2000	# if [[ $vtk_graphics = true ]]
2001	# then
2002	# spalte1=""; spalte2="wird in C++ - Programm eingebunden (vtk)"
2003	# printf "\| $spalte1$spalte2 \| \n"
2004	# fi
2005	else
2006	spalte1=executable:; spalte2=$executable
2007	printf "\| $spalte1$spalte2 \| \n"
2008	fi
2009	printf "\| \| \n"
2010	spalte1="base name of files":; spalte2=$fname
2011	printf "\| $spalte1$spalte2 \| \n"
2012	if [[ $fname != $afname ]]
2013	then
2014	spalte1="base name of input files":; spalte2=$afname
2015	printf "\| $spalte1$spalte2 \| \n"
2016	fi
2017	spalte1="INPUT control list":; spalte2=$input_list
2018	printf "\| $spalte1$spalte2 \| \n"
2019	spalte1="OUTPUT control list":; spalte2=$output_list
2020	printf "\| $spalte1$spalte2 \| \n"
2021
2022	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2023	then
2024	spalte1="memory demand / PE":; spalte2="$memory MB"
2025	printf "\| $spalte1$spalte2 \| \n"
2026	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2027	printf "\| $spalte1$spalte2 \| \n"
2028	fi
2029
2030	if [[ $do_compile = true ]]
2031	then
2032	printf "\| \| \n"
2033	printf "\| Files to be compiled: \| \n"
2034	zeile=$source_list
2035	while [[ "$zeile" != "" ]]
2036	do
2037	spalte3=$zeile
2038	printf "\| $spalte3 \| \n"
2039	zeile=$(echo "$zeile" \| cut -c61-)
2040	done
2041	fi
2042	printf "#--------------------------------------------------------------#"
2043
2044
2045
2046	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2047	if [[ $do_trace = true ]]
2048	then
2049	(( i = 0 ))
2050	while (( i < iin ))
2051	do
2052	(( i = i + 1 ))
2053	if (( i == 1 ))
2054	then
2055	printf "\n\n >>> INPUT-file assignments:\n"
2056	fi
2057	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2058	done
2059	(( i = 0 ))
2060	while (( i < iout ))
2061	do
2062	(( i = i + 1 ))
2063	if (( i == 1 ))
2064	then
2065	printf "\n\n >>> OUTPUT-file assignments:\n"
2066	fi
2067	printf "\n ${localout[$i]} : ${pathout[$i]}"
2068	done
2069	(( i = 0 ))
2070	while (( i < iic ))
2071	do
2072	(( i = i + 1 ))
2073	if (( i == 1 ))
2074	then
2075	printf "\n\n >>> INPUT-commands:\n"
2076	fi
2077	printf "\n ${in_command[$i]}"
2078	done
2079	(( i = 0 ))
2080	while (( i < ioc ))
2081	do
2082	(( i = i + 1 ))
2083	if (( i == 1 ))
2084	then
2085	printf "\n\n >>> OUTPUT-commands:\n"
2086	fi
2087	printf "\n ${out_command[$i]}"
2088	done
2089	fi
2090
2091
2092	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2093	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2094	then
2095	antwort=dummy
2096	printf "\n\n"
2097	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2098	do
2099	printf " >>> everything o.k. (y/n) ? "
2100	read antwort
2101	done
2102	if [[ $antwort = n \|\| $antwort = N ]]
2103	then
2104	locat=user_abort; (( iec = 0 )); exit
2105	fi
2106	if [[ $do_batch = true ]]
2107	then
2108	printf " >>> batch-job will be created and submitted"
2109	else
2110	if [[ $local_compile = false ]]
2111	then
2112	printf " >>> MRUN will now continue to execute on this machine"
2113	else
2114	printf " >>> a test compilation will now be carried out on this machine"
2115	fi
2116	fi
2117	fi
2118
2119
2120
2121
2122	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2123	# CHENDE AKTIONEN DURCHGEFUEHRT
2124	if [[ $do_batch = false ]]
2125	then
2126
2127
2128	# TEMPORAEREN KATALOG ERZEUGEN
2129	mkdir -p $TEMPDIR
2130	chmod go+rx $TEMPDIR
2131	tmpcreate=true
2132
2133
2134	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2135	# TEMPORAERES VERZEICHNIS KOPIEREN
2136	if [[ $do_compile = true ]]
2137	then
2138
2139	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2140	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2141	if [[ $localhost = nech ]]
2142	then
2143	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2144	if mkdir -p $TEMPDIR_COMPILE
2145	then
2146	printf "\n *** \"$TEMPDIR_COMPILE\" "
2147	printf "\n is generated as temporary directory for cross compiling\n"
2148	else
2149	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2150	printf "\n needed for cross compilation failed"
2151	locat=compile
2152	exit
2153	fi
2154	else
2155	TEMPDIR_COMPILE=$TEMPDIR
2156	fi
2157
2158	if [[ "$use_makefile" = true ]]
2159	then
2160
2161	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2162	line=""
2163	grep "%depository_path" $config_file \| while read line
2164	do
2165	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2166	then
2167	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2168	then
2169	global_depository_path=`echo $line \| cut -d" " -s -f2`
2170	fi
2171	fi
2172	done
2173
2174	line=""
2175	grep " $localhost" $config_file \| grep "%depository_path" \| while read line
2176	do
2177	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2178	then
2179	local_depository_path=`echo $line \| cut -d" " -s -f2`
2180	fi
2181	done
2182
2183	if [[ "$local_depository_path" = "" ]]
2184	then
2185	if [[ "$global_depository_path" != "" ]]
2186	then
2187	local_depository_path=$global_depository_path
2188	else
2189	printf "\n\n +++ no depository path found in configuration file"
2190	printf "\n for local host \"$localhost\" "
2191	printf "\n please set \"\%depository_path\" in configuration file\n"
2192	locat=config_file; exit
2193	fi
2194	fi
2195	eval local_depository_path=$local_depository_path
2196
2197	basename=`print $mainprog \| cut -f1 -d"."`
2198	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2199	if [[ ! -f $make_depository ]]
2200	then
2201	printf "\n"
2202	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2203	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2204	else
2205	cp $make_depository $TEMPDIR_COMPILE
2206	cd $TEMPDIR_COMPILE
2207	tar -xf $make_depository > /dev/null 2>&1
2208	cd - > /dev/null
2209	fi
2210
2211	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2212
2213	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2214	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2215	# MAKEFILE EINTRAGEN
2216	cd $TEMPDIR_COMPILE
2217	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2218	if [[ "$interface_file" != "" ]]
2219	then
2220	interface_file=`echo $interface_file \| cut -d"." -f1`
2221	mv Makefile Makefile_old
2222	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2223	fi
2224	cd - > /dev/null
2225	fi
2226	else
2227	cp $executable ${TEMPDIR}/a.out
2228	fi
2229
2230
2231	# WECHSEL IN TEMPORAEREN KATALOG
2232	cd $TEMPDIR
2233	printf "\n *** changed to temporary directory: $TEMPDIR"
2234
2235
2236	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2237	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2238	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2239	# ERMITTELN
2240	(( i = 0 ))
2241	while (( i < iout ))
2242	do
2243	(( i = i + 1 ))
2244	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2245	then
2246	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2247	else
2248	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2249	fi
2250	done
2251
2252
2253	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2254	if [[ $do_compile = true ]]
2255	then
2256
2257
2258	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2259	if [[ "$use_makefile" = true ]]
2260	then
2261	printf "\n\n\n *** compilation starts \n$striche\n"
2262	printf " *** compilation with make using following options:\n"
2263	printf " compilername: $compiler_name\n"
2264	printf " options: $FOPTS\n"
2265	printf " preprocessor-directives: $C_PPOPTS \n"
2266	printf " linker-options: $LOPTS \n"
2267	printf " source code files: $source_list \n"
2268
2269	if [[ $localhost = nech ]]
2270	then
2271	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$C_PPOPTS\" F90FLAGS=\"$FOPTS\" LDFLAGS=\"$LOPTS\" "
2272	cp $TEMPDIR_COMPILE/a.out .
2273	[[ $? != 0 ]] && compile_error=true
2274	rm -rf $TEMPDIR_COMPILE
2275	else
2276	make -f Makefile PROG=a.out F90=$compiler_name COPT="$C_PPOPTS" F90FLAGS="$FOPTS" LDFLAGS="$LOPTS"
2277	fi
2278
2279	# UEBERSETZUNG "VON HAND" (OHNE MAKE)
2280	else
2281
2282
2283	# UEBERSETZUNG DER QUELLTEXT-DATEIEN UND DES HAUPTPROGRAMMS
2284	# $CPPOPTS FUER CPP-PRAEPROZESSOR WURDEN OBEN BESTIMMT
2285	printf "\n\n\n *** compilation starts \n$striche\n"
2286
2287
2288	# VORWEG EVTL. UEBERSETZUNG VON PROGRAMMTEILEN MIT SPEZIELLEN
2289	# COMPILERN UND/ODER COMPILEROPTIONEN. DIESE WERDEN BEI DER SPAETEREN
2290	# EIGENTLICHEN UEBERSETZUNG ALS OBJECT-FILES EINGEBUNDEN
2291	new_source_list=""
2292	for filename in $source_list
2293	do
2294
2295	basename=`print $filename \| cut -f1 -d"."`
2296
2297	# EVTL. SPEZIELLEN COMPILER FUER UP BESTIMMEN
2298	comp_var=$(eval echo \$comp_$basename) # \$ liefert evtl. fuer source alternativ vereinbarten Compiler
2299	comp_opt_var=$(eval echo \$$basename) # \$$ liefert evtl. fuer source vereinbarte Compiler-Environment-Variable
2300
2301	if [[ "$comp_var" = "" && "$comp_opt_var" = "" ]]
2302	then
2303	new_source_list="$new_source_list "$filename
2304	else
2305
2306	if [[ "$comp_var" = "" ]]
2307	then
2308	SPECIAL_COMPILER=$compiler_name
2309	else
2310	SPECIAL_COMPILER=$comp_var
2311	fi
2312
2313	if [[ "$comp_opt_var" = "" ]]
2314	then
2315	SPECIAL_FOPTS=$FOPTS
2316	else
2317	SPECIAL_FOPTS="$parallel_options $(eval echo \$$comp_opt_var)"
2318	fi
2319
2320	printf " *** compiling of $filename with special compiler call: $SPECIAL_COMPILER $CPPOPTS -c $SPECIAL_FOPTS \n"
2321	$SPECIAL_COMPILER $C_PPOPTS -c $SPECIAL_FOPTS $MODULE_OPTIONS $filename
2322	if [[ $? != 0 ]]
2323	then
2324	printf "\n +++ compiling error occured"
2325	locat=compile
2326	exit
2327	fi
2328	new_source_list="$new_source_list "${basename}.o
2329	fi
2330	done
2331	source_list="$new_source_list"
2332
2333
2334	# EIGENTLICHE UEBERSETZUNG MIT DEN NORMALEN OPTIONEN
2335	printf " *** compilation with standard options: $compiler_name $FOPTS $MODULE_OPTIONS \n"
2336	printf " preprocessor-directives: $C_PPOPTS \n"
2337	printf " linker-options: $LOPTS \n"
2338	printf " source code files: $source_list \n"
2339
2340	$compiler_name $C_PPOPTS $FOPTS $MODULE_OPTIONS $LOPTS $source_list
2341
2342	fi
2343	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2344	then
2345	printf "\n +++ error occured while compiling or linking"
2346	locat=compile
2347	exit
2348	else
2349	printf "$striche\n *** compilation finished \n"
2350	fi
2351	fi
2352
2353
2354	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2355	if [[ $local_compile = true ]]
2356	then
2357	cd $HOME
2358	rm -rf $TEMPDIR
2359	locat=local_compile; exit
2360	fi
2361
2362
2363	# BEREITSTELLEN DER INPUT-DATEIEN
2364	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2365	(( i = 0 ))
2366	while (( i < iin ))
2367	do
2368	(( i = i + 1 ))
2369	if (( i == 1 ))
2370	then
2371	printf "\n\n *** providing INPUT-files:\n$striche"
2372	fi
2373
2374
2375	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2376	if [[ "${transin[$i]}" = unavailable ]]
2377	then
2378	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2379	then
2380	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2381	printf "\n is not available!"
2382	else
2383	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2384	printf "\n is not available!"
2385	fi
2386	continue
2387	fi
2388
2389	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2390	files_for_pes=false; datentyp=file
2391	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2392	then
2393	files_for_pes=true; datentyp=directory
2394	actionin[$i]=""
2395	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2396	then
2397	actionin[$i]=""
2398	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2399	then
2400	files_for_pes=true; datentyp=directory
2401	actionin[$i]="ar"
2402	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2403	then
2404	actionin[$i]="ar"
2405	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2406	then
2407	files_for_pes=true; datentyp=directory
2408	actionin[$i]="fl"
2409	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2410	then
2411	actionin[$i]="fl"
2412	fi
2413
2414	if [[ $files_for_pes = true ]]
2415	then
2416	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2417	else
2418	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2419	fi
2420
2421	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2422	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2423	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2424	# SERVER ZU HOLEN
2425	if [[ "${actionin[$i]}" = fl ]]
2426	then
2427	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2428	if [[ $files_for_pes = false ]]
2429	then
2430	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2431	then
2432	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2433	got_tmp[$i]=true
2434	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2435	then
2436	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2437	printf "\n *** trying to use backup copy in \"$WORK\" "
2438	cp $WORK/${frelin[$i]} ${localin[$i]}
2439	else
2440	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2441	printf "\n or \"$tmp_data_catalog\" does not exist!"
2442	printf "\n *** trying to get copy from archive"
2443	actionin[$i]=ar
2444	fi
2445	else
2446	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2447	then
2448	mkdir ${localin[$i]}
2449	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2450	got_tmp[$i]=true
2451	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2452	then
2453	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2454	printf "\n *** trying to use backup copy in \"$WORK\" "
2455	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2456	else
2457	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2458	printf "\n or \"$tmp_data_catalog\" does not exist!"
2459	printf "\n *** trying to get copy from archive"
2460	actionin[$i]=ar
2461	fi
2462	fi
2463	fi
2464
2465
2466	# DATEI LIEGT AUF ARCHIV-SERVER
2467	if [[ "${actionin[$i]}" = ar ]]
2468	then
2469
2470	if [[ $files_for_pes = false ]]
2471	then
2472	printf "\n file will be restored from archive-system ($archive_system)!"
2473	else
2474	printf "\n directory will be restored from archive-system ($archive_system)!"
2475	fi
2476
2477	file_restored=false
2478
2479	if [[ $archive_system = asterix ]]
2480	then
2481	do_stagein=true
2482	(( stagein_anz = 0 ))
2483	while [[ $do_stagein = true ]]
2484	do
2485	if [[ $files_for_pes = false ]]
2486	then
2487	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2488	else
2489	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2490	fi
2491	cat STAGEIN_OUTPUT
2492	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2493	then
2494	file_restored=true
2495	do_stagein=false
2496	else
2497	(( stagein_anz = stagein_anz + 1 ))
2498	if (( stagein_anz == 10 ))
2499	then
2500	printf "\n +++ stagein stoped after 10 tries"
2501	locat=stage
2502	exit
2503	fi
2504	printf "\n +++ restoring from archive failed, trying again:"
2505	sleep 900
2506	fi
2507	done
2508	elif [[ $archive_system = DMF ]]
2509	then
2510	if [[ $files_for_pes = false ]]
2511	then
2512	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2513	locat=DMF
2514	exit
2515	else
2516	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2517	cp -r $ARCHIVE/${frelin[$i]} $PWD
2518	file_restored=true
2519	fi
2520	elif [[ $archive_system = tivoli ]]
2521	then
2522	if [[ $files_for_pes = false ]]
2523	then
2524	if [[ $localhost = ibmh ]]
2525	then
2526	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2527	else
2528	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2529	fi
2530	else
2531	(( inode = 0 ))
2532	while (( inode < nodes ))
2533	do
2534	if [[ $localhost = ibmh ]]
2535	then
2536	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2537	else
2538	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2539	fi
2540	(( inode = inode + 1 ))
2541	done
2542	fi
2543	file_restored=true
2544	elif [[ $archive_system = ut ]]
2545	then
2546	if [[ $files_for_pes = false ]]
2547	then
2548	cp $UT/${frelin[$i]} .
2549	else
2550	(( inode = 0 ))
2551	while (( inode < nodes ))
2552	do
2553	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2554	(( inode = inode + 1 ))
2555	done
2556	fi
2557	file_restored=true
2558	else
2559	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2560	locat=rearchive
2561	exit
2562	fi
2563
2564	if [[ $file_restored = true ]]
2565	then
2566
2567	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2568	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2569	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2570	if [[ $files_for_pes = false ]]
2571	then
2572	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2573	else
2574	mkdir $tmp_data_catalog/${frelin[$i]}
2575	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2576	fi
2577	got_tmp[$i]=true
2578
2579	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2580	mv ${frelin[$i]} ${localin[$i]}
2581
2582	fi
2583	fi
2584
2585
2586	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2587	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2588	then
2589
2590	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2591	then
2592
2593	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2594	printf "\n file will be provided for $numprocs processors"
2595	mkdir ${localin[$i]}
2596	ival=$numprocs
2597	(( ii = 0 ))
2598	while (( ii <= ival-1 ))
2599	do
2600	if (( ii < 10 ))
2601	then
2602	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2603	elif (( ii < 100 ))
2604	then
2605	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2606	elif (( ii < 1000 ))
2607	then
2608	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2609	else
2610	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2611	fi
2612	(( ii = ii + 1 ))
2613	done
2614
2615	else
2616
2617	if [[ $files_for_pes = true ]]
2618	then
2619
2620	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2621	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2622	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2623	# PER MOVE UMBENANNT WERDEN
2624	printf "\n providing $numprocs files for the respective processors"
2625	mkdir ${localin[$i]}
2626	cp -r ${absnamein[$i]}/* ${localin[$i]}
2627
2628	else
2629	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2630	cp ${absnamein[$i]} ${localin[$i]}
2631	fi
2632	fi
2633	fi
2634
2635	done
2636	if (( i != 0 ))
2637	then
2638	printf "\n$striche\n *** all INPUT-files provided \n"
2639	fi
2640
2641
2642	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2643	# LESEN VON PALM)
2644	cat > ENVPAR << %%END%%
2645	&envpar run_identifier = '$fname', host = '$localhost',
2646	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2647	maximum_cpu_time_allowed = ${cpumax}. /
2648
2649	%%END%%
2650
2651
2652	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2653	(( i = 0 ))
2654	while (( i < iic ))
2655	do
2656	(( i = i + 1 ))
2657	if (( i == 1 ))
2658	then
2659	printf "\n\n *** execution of INPUT-commands:\n$striche"
2660	fi
2661	printf "\n >>> ${in_command[$i]}"
2662	eval ${in_command[$i]}
2663	if (( i == iic ))
2664	then
2665	printf "\n$striche\n"
2666	fi
2667	done
2668
2669
2670	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2671	cpurest=${cpumax}.
2672
2673
2674	# PROGRAMMSTART
2675	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2676	PATH=$PATH:$TEMPDIR
2677
2678	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2679	then
2680	if [[ "$ENVIRONMENT" = BATCH ]]
2681	then
2682	printf "\n +++ debug is allowed in interactive mode only"
2683	locat=debug
2684	exit
2685	fi
2686	if [[ $localhost = decalpha ]]
2687	then
2688	dxladebug a.out
2689	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2690	then
2691
2692	# SETUP THE IBM MPI ENVIRONMENT
2693	export MP_SHARED_MEMORY=yes
2694	export AIXTHREADS_SCOPE=S
2695	export OMP_NUM_THREADS=$threads_per_task
2696	export AUTHSTATE=files
2697	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2698
2699	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2700	export MP_ADAPTER_USE=shared
2701	export MP_CPU_USE=multiple
2702	export MP_TIMEOUT=1200
2703
2704	unset MP_TASK_AFFINITY
2705
2706	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2707	#(( ii = 1 ))
2708	#while (( ii <= $numprocs ))
2709	#do
2710	# echo $localhost_realname >> hostfile
2711	# (( ii = ii + 1 ))
2712	#done
2713	#export MP_HOSTFILE=hostfile
2714
2715	if [[ "$LOADLBATCH" = yes ]]
2716	then
2717	totalview poe a.out $ROPTS
2718	else
2719	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2720	export TVDSVRLAUNCHCMD=ssh
2721	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2722	fi
2723	else
2724	printf "\n +++ no debug available on \"$localhost\" "
2725	printf "\n or not implemented in mrun so far"
2726	locat=debug
2727	exit
2728	fi
2729	else
2730	if [[ -n $numprocs ]]
2731	then
2732
2733	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2734	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2735	then
2736	# SETUP THE IBM MPI ENVIRONMENT
2737	export MP_SHARED_MEMORY=yes
2738	export AIXTHREAD_SCOPE=S
2739	export OMP_NUM_THREADS=$threads_per_task
2740	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2741	export AUTHSTATE=files
2742	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2743	# export MP_PRINTENV=yes
2744
2745	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2746	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2747	export MP_WAIT_MODE=poll
2748	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2749	# export MP_EAGER_LIMIT=65535
2750
2751	# # TESTWEISE FUER TURBOMPI (JAN 05)
2752	# export MPJ_MTAB=128
2753	# export MPJ_ALLTOALL=1
2754	# export MPJ_ALLTOALLV=1
2755
2756	if [[ "$LOADLBATCH" = yes ]]
2757	then
2758	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2759	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2760	then
2761	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
2762	else
2763	poe ./a.out $ROPTS > aout_output 2>&1
2764	fi
2765	else
2766	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2767	then
2768	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
2769	elif [[ $localhost = ibmy ]]
2770	then
2771	if [[ -f $hostfile ]]
2772	then
2773	cp $hostfile hostfile
2774	else
2775	(( ii = 1 ))
2776	while (( ii <= $numprocs ))
2777	do
2778	echo $localhost_realname >> hostfile
2779	(( ii = ii + 1 ))
2780	done
2781	fi
2782	export MP_HOSTFILE=hostfile
2783	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
2784	else
2785	if [[ "$host_file" = "" ]]
2786	then
2787	printf "\n +++ no hostfile given in configuration file"
2788	locat=config_file
2789	exit
2790	else
2791	eval host_file=$host_file
2792	fi
2793	export MP_HOSTFILE=$host_file
2794	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
2795	fi
2796	fi
2797	elif [[ $host = nech \|\| $host = neck ]]
2798	then
2799	(( ii = nodes ))
2800	if [[ $ii = 1 ]]
2801	then
2802	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2803	export MPIPROGINF=YES
2804	echo "*** execution on single node with mpirun"
2805	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
2806	else
2807	(( i = 0 ))
2808	while (( i < ii ))
2809	do
2810	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2811	(( i = i + 1 ))
2812	done
2813
2814	echo "#!/bin/sh" > mpi_exec_shell
2815	echo " " >> mpi_exec_shell
2816	echo "set -u" >> mpi_exec_shell
2817	echo "F_ERRCNT=0" >> mpi_exec_shell
2818	echo "MPIPROGINV=YES" >> mpi_exec_shell
2819	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2820	echo "cpurest=$cpurest" >> mpi_exec_shell
2821	echo "fname=$fname" >> mpi_exec_shell
2822	echo "localhost=$localhost" >> mpi_exec_shell
2823	echo "return_addres=$return_addres" >> mpi_exec_shell
2824	echo "return_username=$return_username" >> mpi_exec_shell
2825	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2826	echo "write_binary=$write_binary" >> mpi_exec_shell
2827	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2828	echo " " >> mpi_exec_shell
2829	echo "export F_ERRCNT" >> mpi_exec_shell
2830	echo "export MPIPROGINV" >> mpi_exec_shell
2831	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2832	echo "export cpurest" >> mpi_exec_shell
2833	echo "export fname" >> mpi_exec_shell
2834	echo "export localhost" >> mpi_exec_shell
2835	echo "export return_addres" >> mpi_exec_shell
2836	echo "export return_username" >> mpi_exec_shell
2837	echo "export tasks_per_node" >> mpi_exec_shell
2838	echo "export write_binary" >> mpi_exec_shell
2839	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2840	echo " " >> mpi_exec_shell
2841	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
2842
2843	chmod u+x mpi_exec_shell
2844	export MPIPROGINF=YES
2845	mpirun -f multinode_config &
2846	wait
2847
2848	fi
2849	elif [[ $host = lcmuk ]]
2850	then
2851
2852	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2853	# DOES NOT EXIST
2854	if [[ -f $hostfile ]]
2855	then
2856	cp $hostfile hostfile
2857	else
2858	(( ii = 1 ))
2859	while (( ii <= $numprocs / $threads_per_task ))
2860	do
2861	echo $localhost_realname >> hostfile
2862	(( ii = ii + 1 ))
2863	done
2864	fi
2865	(( ii = $numprocs / $threads_per_task ))
2866	eval zeile=\"`head -n $ii hostfile`\"
2867	printf "\n *** running on: $zeile"
2868	export OMP_NUM_THREADS=$threads_per_task
2869	if [[ $threads_per_task != 1 ]]
2870	then
2871	printf "\n threads per task: $threads_per_task"
2872	fi
2873	printf "\n\n"
2874	if [[ $scirocco = true ]]
2875	then
2876	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
2877	else
2878	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
2879	fi
2880	elif [[ $host = decalpha ]]
2881	then
2882	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
2883	elif [[ $host = lctit ]]
2884	then
2885	export runfile=runfile.$kennung
2886
2887	echo "cd $PWD" > $runfile
2888	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2889	echo "export cpurest=$cpurest" >> $runfile
2890	echo "export fname=$fname" >> $runfile
2891	echo "export localhost=$localhost" >> $runfile
2892	echo "export return_addres=$return_addres" >> $runfile
2893	echo "export return_username=$return_username" >> $runfile
2894	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2895	echo "export write_binary=$write_binary" >> $runfile
2896	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2897	echo "./a.out" >> $runfile
2898	chmod u+x $runfile
2899
2900	if [[ "$QUEUE" = interactive ]]
2901	then
2902	mpirun -np $numprocs $runfile $ROPTS > aout_output 2>&1
2903	else
2904	n1ge -fore -mpi $numprocs -q $queue $runfile $ROPTS > aout_output 2>&1
2905	fi
2906
2907	rm $runfile
2908	else
2909	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
2910	fi
2911	[[ $? != 0 ]] && execution_error=true
2912
2913
2914	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2915	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2916	then
2917	apprentice
2918	fi
2919	else
2920	a.out $ROPTS > aout_output 2>&1
2921	fi
2922	fi
2923	if [[ $? != 0 \|\| $execution_error = true ]]
2924	then
2925
2926	# ABBRUCH BEI LAUFZEITFEHLER
2927	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2928	printf "\n +++ runtime error occured"
2929	locat=execution
2930	exit
2931	else
2932	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
2933	printf "\n$striche\n *** execution finished \n"
2934	fi
2935
2936
2937
2938	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2939	(( i = 0 ))
2940	while (( i < ioc ))
2941	do
2942	(( i = i + 1 ))
2943	if (( i == 1 ))
2944	then
2945	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2946	fi
2947	printf "\n >>> ${out_command[$i]}"
2948	eval ${out_command[$i]}
2949	if (( i == ioc ))
2950	then
2951	printf "\n$striche\n"
2952	fi
2953	done
2954
2955
2956	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2957	if [[ $do_trace = true ]]
2958	then
2959	printf "\n\n"
2960	ls -al
2961	fi
2962
2963
2964
2965	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2966	(( i = 0 ))
2967	while (( i < iout ))
2968	do
2969	(( i = i + 1 ))
2970	if (( i == 1 ))
2971	then
2972	printf "\n\n *** saving OUTPUT-files:\n$striche"
2973	fi
2974
2975	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2976	files_for_pes=false; filetyp=file
2977	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2978	then
2979	files_for_pes=true; filetyp=directory
2980	actionout[$i]=""
2981	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2982	then
2983	actionout[$i]=""
2984	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2985	then
2986	files_for_pes=true; filetyp=directory
2987	actionout[$i]="ar"
2988	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2989	then
2990	actionout[$i]="ar"
2991	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2992	then
2993	files_for_pes=true; filetyp=directory
2994	actionout[$i]="fl"
2995	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2996	then
2997	actionout[$i]="fl"
2998	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2999	then
3000	files_for_pes=true; filetyp=directory
3001	actionout[$i]="tr"
3002	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3003	then
3004	actionout[$i]="tr"
3005	fi
3006
3007	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3008	then
3009	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3010	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
3011	then
3012	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3013	else
3014
3015
3016	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3017	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3018	# REMOTE-RECHNUNGEN
3019	if [[ "${actionout[$i]}" = tr ]]
3020	then
3021	if [[ $localhost != $fromhost ]]
3022	then
3023	if [[ $files_for_pes = false ]]
3024	then
3025	cps=""
3026	cst=""
3027	else
3028	cps=-c
3029	cst="/"
3030	fi
3031	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3032	then
3033
3034	# TRANSFER IN EIGENSTAENDIGEM JOB
3035	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3036	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3037	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3038	if [[ $files_for_pes = false ]]
3039	then
3040	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3041	else
3042	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3043	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3044	fi
3045
3046	echo "set -x" > transfer_${localout[$i]}
3047	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3048	if [[ $filetransfer_protocol = ftp ]]
3049	then
3050	if [[ $files_for_pes = true ]]
3051	then
3052	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3053	fi
3054	printf "\n >>> OUTPUT: ${localout[$i]} by FTP in seperate job to"
3055	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3056	printf "\n or higher cycle\n"
3057	echo "ftpcopy -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3058	else
3059	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3060	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3061	printf "\n or higher cycle\n"
3062	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3063	fi
3064	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3065
3066	if [[ $localhost = nech ]]
3067	then
3068	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3069	else
3070	if [[ "$LOGNAME" = b323013 ]]
3071	then
3072	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3073	else
3074	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3075	fi
3076	fi
3077
3078	else
3079
3080	# TRANSFER INNERHALB DIESES JOBS
3081	transfer_failed=false
3082	if [[ $filetransfer_protocol = ftp ]]
3083	then
3084	if [[ $files_for_pes = true ]]
3085	then
3086	printf "\n +++ WARNING: no transfer of catalogs via ftpcopy\n"
3087	fi
3088	printf "\n >>> OUTPUT: ${localout[$i]} by FTP to"
3089	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3090	ftpcopy -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3091	[[ $? != 0 ]] && transfer_failed=true
3092	else
3093	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3094	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3095	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3096	[[ $? != 0 ]] && transfer_failed=true
3097	fi
3098
3099	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3100	# LOKALER MASCHINE ANLEGEN
3101	if [[ $transfer_failed = true ]]
3102	then
3103	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3104	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3105
3106	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3107	# ANLEGEN.
3108	eval local_catalog=${pathout[$i]}
3109	if [[ ! -d $local_catalog ]]
3110	then
3111	printf " *** local directory does not exist. Trying to create:\n"
3112	printf " $local_catalog \n"
3113	mkdir -p $local_catalog
3114	fi
3115	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3116	transfer_problems=true
3117	fi
3118	fi
3119	else
3120
3121	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3122	actionout[$i]=""
3123	fi
3124	fi
3125
3126
3127	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3128	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3129	# REMOTE-RECHNUNGEN
3130	if [[ "${actionout[$i]}" = tra ]]
3131	then
3132	if [[ $localhost != $fromhost ]]
3133	then
3134	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3135	then
3136
3137	# TRANSFER IN EIGENSTAENDIGEM JOB
3138	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3139	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3140	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3141	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3142
3143	echo "set -x" > transfer_${localout[$i]}
3144	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3145	if [[ $filetransfer_protocol = ftp ]]
3146	then
3147	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP in seperate job to"
3148	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3149	printf "\n or higher cycle\n"
3150	echo "ftpcopy -A -b -m $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3151	else
3152	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3153	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3154	printf "\n or higher cycle\n"
3155	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3156	fi
3157	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3158
3159	if [[ $localhost = nech ]]
3160	then
3161	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3162	else
3163	if [[ $LOGNAME = b323013 ]]
3164	then
3165	subjob -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3166	else
3167	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -f $filetransfer_protocol transfer_${localout[$i]}
3168	fi
3169	fi
3170
3171	else
3172
3173	# TRANSFER INNERHALB DIESES JOBS
3174	transfer_failed=false
3175	if [[ $filetransfer_protocol = ftp ]]
3176	then
3177	printf "\n >>> OUTPUT: ${localout[$i]} append by FTP to"
3178	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3179	ftpcopy -A -b -m $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3180	[[ $? != 0 ]] && transfer_failed=true
3181	else
3182	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3183	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3184	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3185	[[ $? != 0 ]] && transfer_failed=true
3186	fi
3187
3188	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3189	# LOKALER MASCHINE ANLEGEN
3190	if [[ $transfer_failed = true ]]
3191	then
3192	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3193	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3194
3195	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3196	# ANLEGEN
3197	eval local_catalog=${pathout[$i]}
3198	if [[ ! -d $local_catalog ]]
3199	then
3200	printf " *** local directory does not exist. Trying to create:\n"
3201	printf " $local_catalog \n"
3202	mkdir -p $local_catalog
3203	fi
3204
3205	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3206	transfer_problems=true
3207	fi
3208	fi
3209	else
3210
3211	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3212	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3213	actionout[$i]=a
3214	fi
3215	fi
3216
3217
3218	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3219	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3220	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3221	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3222	if [[ "${actionout[$i]}" = fl ]]
3223	then
3224	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3225	chmod g+rx $tmp_data_catalog
3226	if [[ $files_for_pes = false ]]
3227	then
3228	printf "\n >>> OUTPUT: ${localout[$i]} to"
3229	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3230	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3231	else
3232	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3233	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3234	mkdir $tmp_data_catalog/${frelout[$i]}
3235	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3236	fi
3237
3238
3239	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3240	if [[ $store_on_archive_system = true ]]
3241	then
3242
3243	if [[ $archive_system = asterix ]]
3244	then
3245	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3246	if [[ $files_for_pes = false ]]
3247	then
3248	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3249	else
3250	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3251	fi
3252	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3253	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3254	echo "then" >> archive_${frelout[$i]}
3255	echo " do_stageout=false" >> archive_${frelout[$i]}
3256	echo "else" >> archive_${frelout[$i]}
3257	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3258	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3259	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3260	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3261	if [[ $files_for_pes = false ]]
3262	then
3263	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3264	else
3265	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3266	fi
3267	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3268	echo "fi" >> archive_${frelout[$i]}
3269	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3270	elif [[ $archive_system = DMF ]]
3271	then
3272	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3273	if [[ $files_for_pes = false ]]
3274	then
3275	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3276	locat=DMF
3277	exit
3278	else
3279	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3280	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3281	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3282	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3283	fi
3284	elif [[ $archive_system = tivoli ]]
3285	then
3286	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3287	if [[ $files_for_pes = false ]]
3288	then
3289	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3290	echo "set -x" >> archive_${frelout[$i]}
3291	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3292	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3293	else
3294
3295	echo "set -x" >> archive_${frelout[$i]}
3296	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3297	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3298	cd $tmp_data_catalog
3299	all_files=`ls -1 ${frelout[$i]}/*`
3300	cd - > /dev/null
3301	(( inode = 0 ))
3302	(( tp1 = tasks_per_node + 1 ))
3303	while (( inode < nodes ))
3304	do
3305	# echo "*** all_files = \"$all_files\" "
3306	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3307	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3308	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3309	# echo "*** files = \"$files\" "
3310	# echo "*** all_files = \"$all_files\" "
3311	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3312	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3313	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3314	(( inode = inode + 1 ))
3315	done
3316	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3317	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3318	fi
3319	elif [[ $archive_system = ut ]]
3320	then
3321	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3322	if [[ $files_for_pes = false ]]
3323	then
3324	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3325	echo "set -x" >> archive_${frelout[$i]}
3326	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3327	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3328	else
3329
3330	echo "set -x" >> archive_${frelout[$i]}
3331	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3332	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3333	cd $tmp_data_catalog
3334	all_files=`ls -1 ${frelout[$i]}/*`
3335	cd - > /dev/null
3336	(( inode = 0 ))
3337	(( tp1 = tasks_per_node + 1 ))
3338	while (( inode < nodes ))
3339	do
3340	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3341	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3342	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3343	(( inode = inode + 1 ))
3344	done
3345	fi
3346	elif [[ $archive_system = none ]]
3347	then
3348	printf " +++ archiving on $localhost not available!\n"
3349	fi
3350
3351	if [[ $archive_system != none ]]
3352	then
3353	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3354	then
3355	subjob -d -v -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3356	elif [[ $localhost = nech ]]
3357	then
3358	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3359	fi
3360	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3361	fi
3362	else
3363	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3364	fi
3365
3366
3367	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3368	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3369	if [[ $files_for_pes = false ]]
3370	then
3371	cat /dev/null > ${pathout[$i]}
3372	else
3373	mkdir -p ${pathout[$i]}
3374	fi
3375
3376	fi
3377
3378
3379	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3380	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3381	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3382	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3383	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3384	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3385	if [[ "${actionout[$i]}" = ar ]]
3386	then
3387	if [[ $files_for_pes = false ]]
3388	then
3389	printf "\n >>> OUTPUT: ${localout[$i]} to"
3390	printf "\n ${pathout[$i]}"
3391	printf "\n File will be copied to archive-system ($archive_system) !\n"
3392	else
3393	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3394	printf "\n ${pathout[$i]}"
3395	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3396	fi
3397	mv ${localout[$i]} ${frelout[$i]}
3398
3399	file_saved=false
3400
3401	if [[ $archive_system = asterix ]]
3402	then
3403	do_stageout=true
3404	(( stageout_anz = 0 ))
3405	while [[ $do_stageout = true ]]
3406	do
3407	if [[ $files_for_pes = false ]]
3408	then
3409	stageout ${frelout[$i]} > STAGE_OUTPUT
3410	else
3411	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3412	fi
3413	cat STAGE_OUTPUT
3414	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3415	then
3416	file_saved=true
3417	do_stageout=false
3418	else
3419	if [[ $files_for_pes = false ]]
3420	then
3421	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3422	else
3423	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3424	fi
3425	(( stageout_anz = stageout_anz + 1 ))
3426	if (( stageout_anz == 10 ))
3427	then
3428	printf "\n +++ stoped after 10 unsuccessful tries!"
3429	archive_save=false
3430	do_stageout=false
3431	else
3432	printf "\n *** new try to store on archive after 15 min:"
3433	sleep 900
3434	fi
3435	fi
3436	done
3437	elif [[ $archive_system = DMF ]]
3438	then
3439	if [[ $files_for_pes = false ]]
3440	then
3441	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3442	locat=DMF
3443	exit
3444	else
3445	rm -rf $ARCHIVE/${frelout[$i]}
3446	cp -r ${frelout[$i]} $ARCHIVE
3447	fi
3448	file_saved=true
3449	elif [[ $archive_system = tivoli ]]
3450	then
3451	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3452	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3453	# GELEGT WERDEN
3454	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3455	chmod g+rx $tmp_data_catalog
3456	if [[ $files_for_pes = false ]]
3457	then
3458	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3459	else
3460	mkdir $tmp_data_catalog/${frelout[$i]}
3461	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3462	fi
3463
3464	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3465	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3466	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3467	if [[ $files_for_pes = false ]]
3468	then
3469	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3470	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3471	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3472	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3473	else
3474	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3475	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3476	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3477	fi
3478
3479	subjob -v -d -q cdata -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3480	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3481	file_saved=true
3482
3483	elif [[ $archive_system = ut ]]
3484	then
3485	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3486	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3487	# GELEGT WERDEN
3488	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3489	chmod g+rx $tmp_data_catalog
3490	if [[ $files_for_pes = false ]]
3491	then
3492	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3493	else
3494	mkdir $tmp_data_catalog/${frelout[$i]}
3495	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3496	fi
3497
3498	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3499	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3500	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3501	if [[ $files_for_pes = false ]]
3502	then
3503	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3504	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3505	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3506	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3507	else
3508	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3509	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3510	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3511	fi
3512
3513	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 -f $filetransfer_protocol archive_${frelout[$i]}
3514	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3515	file_saved=true
3516
3517	else
3518	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3519	archive_save=false
3520	fi
3521	if [[ $file_saved = true ]]
3522	then
3523	if [[ $files_for_pes = false ]]
3524	then
3525	cat /dev/null > ${pathout[$i]}
3526	else
3527	mkdir -p ${pathout[$i]}
3528	fi
3529	fi
3530	fi
3531
3532	# APPEND AUF LOKALER MASCHINE
3533	if [[ "${actionout[$i]}" = "a" ]]
3534	then
3535	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3536	cat ${localout[$i]} >> ${pathout[$i]}
3537	fi
3538
3539	# KOPIEREN AUF LOKALER MASCHINE
3540	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3541	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3542	then
3543
3544	# KOPIEREN AUF EINPROZESSORMASCHINE
3545	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3546	then
3547	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3548	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3549	else
3550	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3551	cp ${localout[$i]} ${pathout[$i]}
3552	fi
3553
3554	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3555	then
3556
3557	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3558	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3559	# WIRD DANN KOPIERT
3560	# PER MOVE UMBENANNT WERDEN
3561	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3562	cp -r ${localout[$i]} ${pathout[$i]}
3563
3564	fi
3565	fi
3566	done
3567	if (( i != 0 ))
3568	then
3569	if [[ $transfer_problems = true ]]
3570	then
3571	printf "\n$striche\n *** OUTPUT-files saved"
3572	printf "\n +++ WARNING: some data transfers failed! \n"
3573	else
3574	printf "\n$striche\n *** all OUTPUT-files saved \n"
3575	fi
3576	fi
3577
3578
3579	# EVENTUELL FOLGEJOB STARTEN
3580	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3581	if [[ -f CONTINUE_RUN ]]
3582	then
3583
3584	if [[ $archive_save = true ]]
3585	then
3586
3587	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3588	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3589	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3590	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3591	# HANDEN
3592	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3593	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3594	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3595	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3596	then
3597	mc=`echo $mc \| sed 's/#/f/g'`
3598	fi
3599
3600
3601	# JOB STARTEN
3602	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3603	echo " $mc"
3604	printf "\n$striche\n"
3605	if [[ $localhost != $fromhost ]]
3606	then
3607
3608	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3609	then
3610	echo "*** ssh will be used to initiate restart-runs!"
3611	echo " return_addres=\"$return_addres\" "
3612	echo " return_username=\"$return_username\" "
3613	if [[ $return_addres = 172.20.25.41 ]]
3614	then
3615	# WORKAROUND AUF SCIROCCO AM TIT
3616	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3617	else
3618	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3619	fi
3620	else
3621	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3622	locat=restart; exit
3623	fi
3624
3625	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3626	# DER AKTUELLE JOB ENDET
3627	sleep 30
3628
3629	else
3630
3631	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3632	# RUFEN WERDEN
3633	cd $LOCAL_PWD
3634	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3635	cd - > /dev/null
3636	fi
3637	printf "\n$striche\n *** restart-run initiated \n"
3638
3639
3640	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3641	# GEHOLT WORDEN SIND, LOESCHEN
3642	(( i = 0 ))
3643	while (( i < iin ))
3644	do
3645	(( i = i + 1 ))
3646	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3647	then
3648	rm -r $tmp_data_catalog/${frelin[$i]}
3649	fi
3650	done
3651
3652	else
3653
3654	printf "\n +++ no restart-run possible, since errors occured"
3655	printf "\n during the archive process"
3656	fi
3657
3658	fi
3659
3660
3661
3662	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3663	if [[ "$email_notification" != "" ]]
3664	then
3665
3666	if [[ $localhost != $fromhost ]]
3667	then
3668	if [[ -f CONTINUE_RUN ]]
3669	then
3670	echo "PALM restart run necessary" > email_text
3671	echo "description header of actual run:" >> email_text
3672	cat CONTINUE_RUN >> email_text
3673	echo "mrun-command to restart:" >> email_text
3674	echo "$mc" >> email_text
3675	else
3676	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3677	fi
3678	mail $email_notification < email_text
3679	printf "\n *** email notification sent to \"$email_notification\" "
3680	fi
3681	fi
3682
3683
3684
3685	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3686	cd $HOME
3687	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3688
3689	else
3690
3691
3692	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3693	# CHENDE AKTIONEN DURCHGEFUEHRT
3694
3695	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3696	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -f $filetransfer_protocol -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3697	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3698	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3699	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3700	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3701	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3702	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3703	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3704	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3705	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3706	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3707	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3708	if [[ $use_openmp = true ]]
3709	then
3710	mrun_com=${mrun_com}" -O"
3711	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3712	else
3713	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3714	fi
3715	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3716	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3717	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3718	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3719	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3720	if [[ $do_remote = true ]]
3721	then
3722	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3723	fi
3724
3725
3726	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3727	jobfile=jobfile.$RANDOM
3728
3729
3730	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3731	echo "mkdir $TEMPDIR" >> $jobfile
3732	echo "cd $TEMPDIR" >> $jobfile
3733
3734
3735	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3736	if [[ $do_trace = true ]]
3737	then
3738	echo "set -x" >> $jobfile
3739	else
3740	echo "set +vx" >> $jobfile
3741	fi
3742
3743
3744	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3745	# SOWIE GEGEBENENFALLS DES MAKEFILES
3746	if [[ $do_compile = true ]]
3747	then
3748
3749	source_catalog=SOURCES_FOR_RUN_$fname
3750
3751	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3752	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3753	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3754	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3755	echo "export SOURCES_COMPLETE=true" >> $jobfile
3756	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3757
3758	for filename in $source_list
3759	do
3760	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3761	echo "cat > $filename << \"%END%\"" >> $jobfile
3762	cat $source_catalog/$filename >> $jobfile
3763	echo " " >> $jobfile
3764	echo "%END%" >> $jobfile
3765	echo " " >> $jobfile
3766	done
3767
3768	if [[ "$use_makefile" = true ]]
3769	then
3770	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3771	echo "cat > Makefile << \"%END%\"" >> $jobfile
3772	cat $source_catalog/Makefile >> $jobfile
3773	echo " " >> $jobfile
3774	echo "%END%" >> $jobfile
3775	echo " " >> $jobfile
3776	fi
3777
3778	echo "cd - > /dev/null" >> $jobfile
3779
3780	fi
3781
3782
3783	# ABSPEICHERN DER KONFIGURATIONSDATEI
3784	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3785	echo "cat > $config_file << \"%END%\"" >> $jobfile
3786	cat $config_file >> $jobfile
3787	echo "%END%" >> $jobfile
3788	echo " " >> $jobfile
3789
3790
3791	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3792	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3793	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3794	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3795	echo "%END%" >> $jobfile
3796	if [[ $host = lctit ]]
3797	then
3798	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3799	echo "mv mrun_new $mrun_script_name" >> $jobfile
3800	fi
3801	echo "chmod u+x $mrun_script_name" >> $jobfile
3802	echo "execute_mrun=true" >> $jobfile
3803	echo " " >> $jobfile
3804
3805	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3806	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3807	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3808	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3809	if [[ $do_remote = true ]]
3810	then
3811	(( i = 0 ))
3812	while (( i < iin ))
3813	do
3814	(( i = i + 1 ))
3815	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3816	if [[ "${transin[$i]}" = job ]]
3817	then
3818	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3819	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3820	echo " " >> $jobfile
3821	echo "%END%" >> $jobfile
3822	else
3823	if [[ $filetransfer_protocol = ftp ]]
3824	then
3825	echo "ftpcopy -b -o -g -s $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3826	else
3827	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3828	fi
3829	fi
3830
3831	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3832	echo "if [[ \$? = 1 ]]" >> $jobfile
3833	echo "then" >> $jobfile
3834	echo " echo \" \" " >> $jobfile
3835	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3836	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3837	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3838	echo " execute_mrun=false" >> $jobfile
3839	echo "fi" >> $jobfile
3840	done
3841	fi
3842
3843	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3844	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3845	echo "LOCAL_PWD=$working_directory" >> $jobfile
3846	echo "export LOCAL_PWD" >> $jobfile
3847
3848	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3849	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3850	echo "export LOCAL_MRUN_PATH" >> $jobfile
3851
3852	# echo "for_subjob_to_do=\"rm -rf $TEMPDIR\" " >> $jobfile
3853
3854	# MRUN AUF ZIELRECHNER AUFRUFEN
3855	echo "set -x" >> $jobfile
3856	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3857
3858	echo 'ls -al; echo `pwd`' >> $jobfile
3859	echo "cd \$HOME" >> $jobfile
3860	echo "rm -rf $TEMPDIR" >> $jobfile
3861
3862
3863
3864
3865	# JOB PER SUBJOB STARTEN
3866	if [[ $silent = false ]]
3867	then
3868	printf "\n "
3869	else
3870	printf "\n\n"
3871	fi
3872
3873	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -f $filetransfer_protocol -v $jobfile
3874	rm -rf $jobfile
3875
3876
3877	fi # ENDE REMOTE-TEIL
3878
3879
3880
3881	# ENDE DER PROZEDUR

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