Home

Context Navigation

source: palm/trunk/SCRIPTS/mrun @ 200

Last change on this file since 200 was 197, checked in by raasch, 16 years ago
further adjustments for SGI and other small changes
Property svn:keywords set to `Id`
File size: 149.2 KB

Line
1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 197 2008-09-16 15:29:03Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
143	# which allows the user to choose his own job catalog
144	# by setting job_catalog in the configuration file
145	# (default is ~/job_queue),
146	# workaround for mpiexec with -env option,
147	# adjustments for lcxt4 (Bergen Center for Computational
148	# Science)
149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
150	# true, mrun tries "ln -f" on local input and resorts
151	# to "cp" or "cp -r" on error
152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
153	# 14/07/08 - Siggi - adjustments for lcsgih
154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
155
156	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
157
158	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
159	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
160	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
161
162	AddFilenames=""
163	additional_conditions=""
164	add_source_path=""
165	afname=""
166	archive_save=true
167	archive_system=none
168	compiler_name=""
169	cond1=""
170	cond2=""
171	config_file=.mrun.config
172	cpp_opts=""
173	cpp_options=""
174	cpumax=0
175	cpurest=0
176	delete_temporary_catalog=true
177	do_batch=false
178	do_compile=true
179	do_remote=false
180	do_stagein=true
181	do_stageout=true
182	do_trace=false
183	email_notification=""
184	exclude=""
185	executable=""
186	execution_error=false
187	fimm=false
188	fname=test
189	fromhost=""
190	global_revision=""
191	group_number=none
192	host=""
193	host_file=""
194	hp=""
195	ignore_archive_error=false
196	input_list=""
197	interpreted_config_file=""
198	job_catalog="~/job_queue"
199	job_on_file=""
200	keep_data_from_previous_run=false
201	link_local_input=false
202	link_local_output=false
203	localhost_realname=$(hostname)
204	local_compile=false
205	locat=normal
206	mainprog=""
207	makefile=""
208	mc=$0
209	while [[ $(echo $mc \| grep -c "/") != 0 ]]
210	do
211	mc=`echo $mc \| cut -f2- -d"/"`
212	done
213	module_files=""
214	mrun_script_name=$mc
215	netcdf_inc=""
216	netcdf_lib=""
217	netcdf_support=false
218	node_usage=default
219	numprocs=""
220	OOPT=""
221	openmp=false
222	output_list=""
223	package_list=""
224	punkte="..........................................................."
225	queue=none
226	read_from_config=""
227	restart_run=false
228	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
229	if [[ $return_addres = 130.75.105.158 ]]
230	then
231	return_addres=172.20.25.41
232	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
233	fi
234	# if [[ $return_addres = 210.117.65.1 ]]
235	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
236	# then
237	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
238	# fi
239	return_password=""
240	return_username=$LOGNAME
241	remotecall=false
242	remote_username=""
243	run_coupled_model=false
244	run_mode=""
245	scirocco=false
246	store_on_archive_system=true
247	striche=" ----------------------------------------------------------------------------"
248	silent=false
249	source_list=""
250	source_path=SOURCE
251	tasks_per_node=""
252	threads_per_task=1
253	tmpcreate=false
254	tmp_data_catalog=""
255	transfer_problems=false
256	usern=$LOGNAME
257	working_directory=`pwd`
258	TOPT=""
259	XOPT=""
260	zeit=$( date \| cut -c 12-19 )
261
262	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
263	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
264
265	typeset -R30 calltime
266	typeset -L20 spalte1
267	typeset -L40 spalte2
268	typeset -L60 spalte3
269	typeset -L35 string1=`date`
270	typeset -L12 string2=$usern
271	typeset -L12 string3=$localhost_realname
272	typeset -L12 string4
273	typeset -L12 string5
274	typeset -L30 version="MRUN 2.0 Rev$Rev: 164 $"
275
276
277
278	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
279	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
280
281	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
282	# EXPORTIERT WERDEN
283	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
284	export group_number input_list memory numprocs output_list queue run_mode
285
286
287
288	# FEHLERBEHANDLUNG
289	# BEI EXIT:
290	trap 'rm -rf $working_directory/tmp_mrun
291	if [[ $locat != localhost ]]
292	then
293	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
294	# then
295	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
296	#MRUN-calls on $localhost
297	#
298	#date and time user localhost remotehost termination mrun-command
299	#--------------------------------------------------------------------------------------------------------------------
300	#%STATEND%
301	# chmod 666 ${mrun_path}/statistik/mrun_statistik
302	# fi
303	#
304	# # EINTRAG IN DIE STATISTIK-DATEI
305	# string4=$host
306	# string5=$locat
307	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
308	# then
309	# if [[ $do_batch = true ]]
310	# then
311	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
312	# else
313	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
314	# fi
315	# fi
316	echo " " > /dev/null
317	fi
318
319	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
320	then
321
322	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
323	(( i = 0 ))
324	while (( i < iec ))
325	do
326	(( i = i + 1 ))
327	printf "\n *** Execution of ERROR-command:\n"
328	printf " >>> ${err_command[$i]}\n"
329	eval ${err_command[$i]}
330	done
331	if [[ -n $interpreted_config_file ]] then
332	rm -rf $interpreted_config_file
333	fi
334	if [[ -n .mrun_environment ]] then
335	rm -rf .mrun_environment
336	fi
337	if [[ $tmpcreate = true ]]
338	then
339	printf "\n *** Contents of \"$TEMPDIR\":\n"
340	ls -al; cd
341	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
342	fi
343	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
344	then
345	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
346	fi
347	printf "\n\n+++ MRUN killed \n\n"
348	elif [[ $locat != control_c ]]
349	then
350	printf "\n\n --> all actions finished\n\n"
351	printf " Bye, bye $usern !!\n\n"
352	fi' exit
353
354
355	# BEI TERMINAL-BREAK:
356	trap 'rm -rf $working_directory/tmp_mrun
357	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
358	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
359	then
360	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
361	fi
362	printf "\n+++ MRUN killed by \"^C\" \n\n"
363	locat=control_c
364	exit
365	' 2
366
367
368	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
369	# BEEN SET
370	if [[ "$PALM_BIN" = "" ]]
371	then
372	printf "\n +++ environment variable PALM_BIN has not been set"
373	printf "\n please set it to the directory where the PALM scripts are located"
374	locat=palm_bin; exit
375	fi
376	export PATH=$PALM_BIN:$PATH
377
378
379
380	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
381	# FUER FOLGEJOBS BENOETIGT WIRD
382	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
383	do
384	case $option in
385	(a) afname=$OPTARG;;
386	(A) store_on_archive_system=false; mc="$mc -A";;
387	(b) do_batch=true; mc="$mc -b";;
388	(B) delete_temporary_catalog=false; mc="$mc -B";;
389	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
390	(C) restart_run=true; mc="$mc -C";;
391	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
392	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
393	(F) job_on_file="-D"; mc="$mc -F";;
394	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
395	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
396	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
397	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
398	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
399	(I) ignore_archive_error=true; mc="$mc -I";;
400	(k) keep_data_from_previous_run=true; mc="$mc -k";;
401	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
402	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
403	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
404	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
405	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
406	(O) use_openmp=true; mc="$mc -O";;
407	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
408	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
409	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
410	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
411	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
412	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
413	(S) read_from_config=false; mc="$mc -S";;
414	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
415	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
416	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
417	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
418	(v) silent=true; mc="$mc -v";;
419	(x) do_trace=true;set -x; mc="$mc -x";;
420	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
421	(Y) run_coupled_model=true; mc="$mc -Y";;
422	(\?) printf "\n +++ unknown option $OPTARG \n"
423	printf "\n --> type \"$0 ?\" for available options \n"
424	locat=parameter;exit;;
425	esac
426	done
427
428
429	# EVTL. POSITIONSPARAMETER EINLESEN
430	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
431	shift OPTIND-1
432
433
434	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
435	if [[ "$1" = "?" ]]
436	then
437	(printf "\n *** mrun can be called as follows:\n"
438	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
439	printf "\n Description of available options:\n"
440	printf "\n Option Description Default-Value"
441	printf "\n -a base name of input files equiv. -d"
442	printf "\n -A no archiving when using file-attribute fl"
443	printf "\n -b batch-job on local machine ---"
444	printf "\n -B do not delete temporary directory at end ---"
445	printf "\n -c configuration file .mrun.config"
446	printf "\n -d base name of files attached to program test"
447	printf "\n -D preprocessor(cpp)-directives \"\" "
448	printf "\n -F create remote job file only ---"
449	printf "\n -h execution host $localhost_realname"
450	printf "\n -i INPUT control list \"\" "
451	printf "\n -I archiving errors of previous batch-jobs"
452	printf "\n will be ignored"
453	printf "\n -k keep data from previous run"
454	printf "\n -K additional conditions for controling"
455	printf "\n usage of conditional code and"
456	printf "\n env-variables in configuration file \"\" "
457	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
458	printf "\n -M Makefile name Makefile"
459	printf "\n -n node usage (shared/not_shared) depending on -h"
460	printf "\n -o OUTPUT control list \"\" "
461	printf "\n -O use OpenMP ---"
462	printf "\n -p software package list \"\" "
463	printf "\n -q queue \"$queue\" "
464	printf "\n -r run control list (combines -i -o) \"\" "
465	printf "\n -s filenames of routines to be compiled \"\" "
466	printf "\n must end with .f, .f90, .F, or .c !"
467	printf "\n use \"..\" for more than one file and wildcards"
468	printf "\n -s TEST compiles all files with w-permit"
469	printf "\n -S config file interpreted by shellscript ---"
470	printf "\n -t allowed cpu-time in seconds (batch) 0"
471	printf "\n -T tasks per node depending on -h"
472	printf "\n -u username on remote machine \"\" "
473	printf "\n -v no prompt for confirmation ---"
474	printf "\n -x tracing of mrun for debug purposes ---"
475	printf "\n -X # of processors (on parallel machines) 1"
476	printf "\n -Y run coupled model ---"
477	printf "\n "
478	printf "\n Possible values of positional parameter <modus>:"
479	printf "\n \"?\" - this outline \n\n") \| more
480	exit
481	elif [[ "$1" != "" ]]
482	then
483	printf "\n +++ positional parameter $1 unknown \n"
484	locat=parameter; exit
485	fi
486
487
488
489	# KURZE STARTMELDUNG
490	printf "\n*** $version "
491	printf "\n will be executed. Please wait ..."
492
493
494
495	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
496	if [[ ! -f $config_file ]]
497	then
498	printf "\n\n +++ configuration file: "
499	printf "\n $config_file"
500	printf "\n does not exist"
501	locat=connect; exit
502	fi
503
504
505	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
506	line=""
507	grep "%host_identifier" $config_file > tmp_mrun
508	while read line
509	do
510	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
511	then
512	HOSTNAME=`echo $line \| cut -d" " -s -f2`
513	host_identifier=`echo $line \| cut -d" " -s -f3`
514	if [[ $localhost_realname = $HOSTNAME ]]
515	then
516	localhost=$host_identifier
517	break
518	fi
519	fi
520	done < tmp_mrun
521
522	if [[ "$localhost" = "" ]]
523	then
524	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
525	printf "\n for local host \"$localhost_realname\"."
526	printf "\n Please add line"
527	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
528	printf "\n to the configuration file."
529	locat=localhost; exit
530	fi
531
532
533
534	# HOSTSPEZIFISCHE VARIABLEN SETZEN
535	case $localhost_realname in
536	(breg-en0\|berni-en0) archive_system=tivoli;;
537	(cs*) archive_system=ut;;
538	(fimm.bccs.uib.no) fimm=true;;
539	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
540	(hreg-en0\|hanni-en0) archive_system=tivoli;;
541	(scirocco) scirocco=true;;
542	esac
543
544
545
546	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
547	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
548	[[ "$afname" = "" ]] && afname=$fname
549
550
551	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
552	if [[ "$run_mode" != "" ]]
553	then
554	input_list="$input_list $run_mode"
555	output_list="$output_list $run_mode"
556	fi
557
558
559	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
560	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
561	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
562	# STARTET)
563	if [[ "$fromhost" = "" ]]
564	then
565	fromhost=$localhost
566	fi
567
568
569	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
570	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
571	then
572	source_list=TEST
573	local_compile=true
574	host=$localhost
575	fi
576
577
578	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
579	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
580	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
581	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
582	if [[ -n $host && "$host" != $localhost ]]
583	then
584	do_batch=true
585	do_remote=true
586	case $host in
587	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lcsgib\|lcsgih\|lctit\|unics) true;;
588	(*) printf "\n"
589	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
590	printf "\n is not available"
591	locat=nqs; (( iec = 0 )); exit;;
592	esac
593	else
594	host=$localhost
595	fi
596
597
598	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
599	if [[ -n $additional_conditions ]]
600	then
601	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
602	cond1=`echo $additional_conditions \| cut -d" " -f1`
603	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
604	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
605	if [[ -n $dummy ]]
606	then
607	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
608	locat=options; exit
609	fi
610	fi
611
612
613	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
614	# ARCHIVIERUNG FEHLGESCHLAGEN IST
615	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
616	then
617	if [[ $ignore_archive_error = false ]]
618	then
619	printf "\n +++ data archiving of previous run failed"
620	printf "\n see directory \~/job_queue on remote machine"
621	locat=archive; exit
622	else
623	printf "\n +++ warning: data archiving in a previous run failed"
624	printf "\n MRUN continues, trying to get backup copy"
625	fi
626	fi
627
628
629
630	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
631	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
632	if [[ "$read_from_config" = false ]]
633	then
634
635	[[ $silent = false ]] && printf "\n Reading the configuration file... "
636	while read zeile
637	do
638	[[ $silent = false ]] && printf "."
639
640
641	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
642	# ERSETZEN
643	eval zeile=\"$zeile\"
644
645
646	# INTERPRETATION DER ZEILE
647	if [[ "$(echo $zeile)" = "" ]]
648	then
649	# LEERZEILE, KEINE AKTION
650	continue
651
652	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
653	then
654
655	# ZEILE IST KOMMENTARZEILE
656	true
657
658	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
659	then
660
661	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
662	zeile=$(echo $zeile \| cut -c2-)
663	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
664	var=`echo $zeile \| cut -d" " -f1`
665	value=`echo $zeile \| cut -d" " -s -f2`
666	for_host=`echo $zeile \| cut -d" " -s -f3`
667	for_cond1=`echo $zeile \| cut -d" " -s -f4`
668	for_cond2=`echo $zeile \| cut -d" " -s -f5`
669
670	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
671	then
672
673	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
674	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
675	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
676
677
678	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
679	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
680	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
681	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
682	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
683	# KONFIGURATIONSDATEI
684	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
685	then
686	eval $var=\$value
687
688	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
689	if [[ $do_trace = true ]]
690	then
691	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
692	fi
693	fi
694
695	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
696	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
697	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
698	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
699	if [[ $var = host ]]
700	then
701	if [[ -n $host && "$host" != $localhost ]]
702	then
703	do_batch=true
704	do_remote=true
705	case $host in
706	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
707	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
708	printf "\n is not available"
709	locat=nqs; exit;;
710	esac
711	else
712	host=$localhost
713	fi
714	fi
715
716	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
717	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
718	# DEN PROGRAMMEN BENOETIGT WERDEN
719	export $var
720	fi
721
722
723
724
725	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
726	then
727
728	# ZEILE DEFINIERT ERROR-KOMMANDO
729	(( iec = iec + 1 ))
730	zeile=$(echo $zeile \| cut -c4-)
731	err_command[$iec]="$zeile"
732
733	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
734	then
735
736	# ZEILE DEFINIERT INPUT-KOMMANDO
737	(( iic = iic + 1 ))
738	zeile=$(echo $zeile \| cut -c4-)
739	in_command[$iic]="$zeile"
740
741	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
742	then
743
744	# ZEILE DEFINIERT OUTPUT-KOMMANDO
745	(( ioc = ioc + 1 ))
746	zeile=$(echo $zeile \| cut -c4-)
747	out_command[$ioc]="$zeile"
748
749	else
750
751	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
752	# s2a: in/out - Feld
753	# s2b: loc - Feld (optional)
754	# s2c: tr/ar - Feld (optional)
755	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
756	s1=`echo $zeile \| cut -d" " -f1`
757	s2=`echo $zeile \| cut -d" " -s -f2`
758	s2a=$(echo $s2 \| cut -d":" -f1)
759	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
760	then
761	s2b=""
762	s2c=""
763	else
764	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
765	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
766	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
767	fi
768	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
769	s3=`echo $zeile \| cut -d" " -f3`
770	s4=`echo $zeile \| cut -d" " -s -f4`
771	s5=`echo $zeile \| cut -d" " -s -f5`
772	s6=`echo $zeile \| cut -d" " -s -f6`
773
774
775	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
776	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
777	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
778	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
779	# HANDEN SEIN MUSS (D.H. s2b = loc)
780	IFSALT="$IFS"; IFS="$IFS:"
781	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
782	then
783	found=false
784	for actual in $input_list
785	do
786	for formal in $s3
787	do
788	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
789	done
790	done
791	if [[ $found = true ]]
792	then
793	(( iin = iin + 1 ))
794	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
795	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
796	extin[$iin]=$s6
797	fi
798	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
799	then
800	found=false
801	for actual in $output_list
802	do
803	for formal in $s3
804	do
805	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
806	done
807	done
808	if [[ $found = true ]]
809	then
810	(( iout = iout + 1 ))
811	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
812	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
813	fi
814	elif [[ "$s2a" != in && "$s2a" != out ]]
815	then
816	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
817	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
818	locat=connect; exit
819	fi
820	IFS="$IFSALT"
821	fi
822	done < $config_file
823
824	else
825
826
827	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
828	[[ $silent = false ]] && printf "..."
829	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
830	export interpreted_config_file=.icf.$RANDOM
831
832
833
834	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
835	# VERFUEGUNG STELLEN
836	cat > .mrun_environment << %%END%%
837	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
838	config_file = '$config_file', do_remote = '$do_remote',
839	do_trace = '$do_trace', host = '$host',
840	input_list = '$input_list', icf = '$interpreted_config_file',
841	localhost = '$localhost', output_list = '$output_list' /
842
843	%%END%%
844
845	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
846	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
847	mrun_memory=$memory
848	mrun_group_number=$group_number
849	mrun_cpumax=$cpumax
850	mrun_numprocs=$numprocs
851
852	if [[ $localhost_realname = "gate" ]]
853	then
854	interpret_config_gate.x
855	else
856	interpret_config.x
857	fi
858	rm .mrun_environment
859
860
861	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
862	chmod u+x $interpreted_config_file
863	export PATH=$PATH:.
864	. $interpreted_config_file
865	rm $interpreted_config_file
866
867
868	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
869	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
870	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
871	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
872	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
873
874	fi
875
876
877	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
878	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
879	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
880	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
881	if [[ "$SOURCES_COMPLETE" = "" ]]
882	then
883
884	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
885	# VEREINBART WURDE
886	source_path=""
887	line=""
888	grep "%source_path" $config_file > tmp_mrun
889	while read line
890	do
891	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
892	then
893	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
894	then
895	global_source_path=`echo $line \| cut -d" " -f2`
896	fi
897	fi
898	done < tmp_mrun
899
900	line=""
901	found=false
902	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
903	while read line
904	do
905	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
906	then
907	if [[ $found = true ]]
908	then
909	printf "\n\n +++ more than one source path found in configuration file"
910	printf "\n for local host \"$localhost\" "
911	locat=source_path; exit
912	fi
913	source_path=`echo $line \| cut -d" " -f2`
914	found=true
915	fi
916	done < tmp_mrun
917	rm tmp_mrun
918
919	if [[ "$source_path" = "" ]]
920	then
921	if [[ "$global_source_path" != "" ]]
922	then
923	source_path=$global_source_path
924	else
925	printf "\n\n +++ no source path found in configuration file"
926	printf "\n for local host \"$localhost\" "
927	locat=source_path; exit
928	fi
929	fi
930	eval source_path=$source_path
931
932	if [[ ! -d $source_path ]]
933	then
934	printf "\n\n +++ source path \"$source_path\" on local host"
935	printf "\n \"$localhost\" does not exist"
936	locat=source_path; exit
937	fi
938
939	fi
940
941
942	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
943	# DURCH OPTION -G MITGETEILT)
944	if [[ "$global_revision" = "" ]]
945	then
946	global_revision=`svnversion $source_path 2>/dev/null`
947	global_revision="Rev: $global_revision"
948	fi
949
950
951	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
952	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
953	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
954	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
955	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
956	if [[ -n $host && "$host" != $localhost ]]
957	then
958	do_batch=true
959	do_remote=true
960	case $host in
961	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|neck\|unics) true;;
962	(*) printf "\n"
963	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
964	printf "\n is not available"
965	locat=nqs; (( iec = 0 )); exit;;
966	esac
967	else
968	host=$localhost
969	fi
970
971
972	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
973	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
974	then
975
976	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
977	if [[ ! -n $numprocs ]]
978	then
979	printf "\n"
980	printf "\n +++ option \"-K parallel\" requires additional specification"
981	printf "\n of the number of processors to be used by"
982	printf "\n mrun-option \"-X\" or by environment-variable"
983	printf "\n \"numprocs\" in the configuration file"
984	locat=numprocs; (( iec = 0 )); exit
985	fi
986
987	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
988	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
989	# GESAMTPROZESSORANZAHL IST
990	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
991	then
992	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
993	(( ival = $tasks_per_node ))
994	(( pes = numprocs ))
995	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
996	# then
997	# (( pes = pes - 1 ))
998	# fi
999	(( ii = pes / ival ))
1000	if (( pes - ii * ival > 0 ))
1001	then
1002	printf "\n"
1003	printf "\n +++ tasks per node (option \"-T\") must be an integral"
1004	printf "\n divisor of the total number of processors (option \"-X\")"
1005	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1006	locat=tasks_per_node; (( iec = 0 )); exit
1007	fi
1008	fi
1009
1010	# IBMY HAT NUR EINEN KNOTEN
1011	if [[ $host = ibmy ]]
1012	then
1013	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
1014	then
1015	printf "\n"
1016	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1017	printf "\n total number of processors (option \"-X\")"
1018	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1019	locat=tasks_per_node; (( iec = 0 )); exit
1020	fi
1021	fi
1022
1023	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1024	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1025	if [[ $use_openmp = true ]]
1026	then
1027	threads_per_task=$tasks_per_node
1028	tasks_per_node=1
1029	fi
1030	OOPT="-O $threads_per_task"
1031	TOPT="-T $tasks_per_node"
1032
1033	# GESAMTZAHL DER KNOTEN BESTIMMEN
1034	if [[ "$tasks_per_node" != "" ]]
1035	then
1036	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1037	fi
1038
1039	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1040	# SETZEN
1041	if [[ $node_usage = default ]]
1042	then
1043	if [[ $host = ibms ]]
1044	then
1045	node_usage=shared
1046	elif [[ $host = lctit ]]
1047	then
1048	node_usage=sla3
1049	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
1050	then
1051	node_usage=singlejob
1052	else
1053	node_usage=not_shared
1054	fi
1055	fi
1056
1057	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
1058	then
1059	printf "\n"
1060	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1061	printf "\n \"shared\" or \"not_shared\""
1062	locat=tasks_per_node; (( iec = 0 )); exit
1063	fi
1064
1065	fi
1066
1067	# PRUEFEN, OB HOSTFILE EXISTIERT
1068	if [[ -n $hostfile ]]
1069	then
1070	if [[ ! -f $hostfile ]]
1071	then
1072	printf "\n"
1073	printf "\n +++ hostfile \"$hostfile\" does not exist"
1074	locat=hostfile; exit
1075	fi
1076	fi
1077
1078	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1079	if [[ $host = ibmy && $do_remote = false ]]
1080	then
1081	if [[ ! -f $HOME/.rhosts ]]
1082	then
1083	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1084	printf "\n\n *** file:"
1085	printf "\n $HOME/.rhosts"
1086	printf "\n was created\n"
1087	fi
1088	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1089	then
1090	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1091	printf "\n\n *** file:"
1092	printf "\n $HOME/.rhosts"
1093	printf "\n was extended by the name of the current host\n"
1094	fi
1095	fi
1096
1097
1098
1099	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1100	if [[ $queue = none ]]
1101	then
1102	case $host in
1103	(ibmb) if [[ $node_usage = shared ]]
1104	then
1105	queue=cshare
1106	else
1107	queue=csolo
1108	fi;;
1109	(ibmh) if [[ $node_usage = shared ]]
1110	then
1111	queue=cshare
1112	else
1113	queue=csolo
1114	fi;;
1115	(ibmy) queue=parallel;;
1116	(lcsgib) queue=bigq;;
1117	(lcsgih) queue=bigq;;
1118	(lctit) queue=sla3;;
1119	(nech) queue=none;;
1120	(neck) queue=P;;
1121	(unics) queue=unics;;
1122	esac
1123	fi
1124
1125
1126	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1127	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1128	# ERMITTELN
1129	(( i = 0 ))
1130	while (( i < iin ))
1131	do
1132	(( i = i + 1 ))
1133	(( maxcycle = 0 ))
1134
1135	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1136	if [[ "${actionin[$i]}" = di ]]
1137	then
1138	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1139	# REM-MASCHINE AUSWERTEN
1140	eval filename=${pathin[$i]}/${endin[$i]}
1141	else
1142	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1143	# REM-MASCHINE AUSWERTEN
1144	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1145	fi
1146
1147	# PRUEFEN AUF VORHANDENSEIN
1148	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1149	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1150	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1151	then
1152	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1153	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1154	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1155	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1156	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1157	if [[ "${transin[$i]}" != "locopt" ]]
1158	then
1159	printf "\n\n +++ INPUT-file: "
1160	if [[ "${extin[$i]}" = "" ]]
1161	then
1162	printf "\n $filename"
1163	else
1164	printf "\n $filename.${extin[$i]}"
1165	fi
1166	printf "\n does not exist\n"
1167	locat=input; exit
1168	else
1169	transin[$i]="unavailable"
1170	fi
1171	else
1172
1173	# ZYKLUSNUMMER FESTSTELLEN
1174	ls -1 -d $filename > filelist 2>/dev/null
1175	ls -1 -d $filename.* >> filelist 2>/dev/null
1176	while read zeile
1177	do
1178	cycle=$(print $zeile \| cut -f2 -d".")
1179	if [[ "$cycle" = "$zeile" ]]
1180	then
1181	(( icycle = 0 ))
1182	elif [[ "$cycle" = "${extin[$i]}" ]]
1183	then
1184	(( icycle = 0 ))
1185	else
1186	(( icycle = $cycle ))
1187	fi
1188	if (( icycle > maxcycle ))
1189	then
1190	(( maxcycle = icycle ))
1191	file_to_be_used=$zeile
1192	fi
1193	done <filelist
1194	rm filelist
1195
1196	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1197	if (( maxcycle > 0 ))
1198	then
1199	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1200	then
1201	filename=${filename}.$maxcycle.${extin[$i]}
1202	else
1203	filename=${filename}.$maxcycle
1204	fi
1205	else
1206	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1207	then
1208	filename=${filename}.${extin[$i]}
1209	fi
1210	fi
1211
1212	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1213	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1214	absnamein[$i]=$filename
1215	if (( maxcycle > 0 ))
1216	then
1217	if [[ "${actionin[$i]}" = di ]]
1218	then
1219	frelin[$i]=${endin[$i]}.$maxcycle
1220	else
1221	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1222	fi
1223	else
1224	if [[ "${actionin[$i]}" = di ]]
1225	then
1226	frelin[$i]=${endin[$i]}
1227	else
1228	frelin[$i]=${afname}${endin[$i]}
1229	fi
1230	fi
1231
1232	fi
1233	done
1234
1235
1236	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1237	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1238	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1239	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1240	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1241	(( i = 0 ))
1242	while (( i < iout ))
1243	do
1244	(( i = i + 1 ))
1245	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1246	then
1247	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1248	then
1249	actionout[$i]=""
1250	elif [[ "${actionout[$i]}" = tra ]]
1251	then
1252	actionout[$i]=a
1253	fi
1254	(( maxcycle = 0 ))
1255	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1256	eval catalogname=${pathout[$i]}
1257	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1258	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1259	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1260	then
1261
1262	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1263	if cat /dev/null > $filename
1264	then
1265	rm $filename
1266	else
1267
1268	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1269	if [[ ! -d $catalogname ]]
1270	then
1271	if mkdir -p $catalogname
1272	then
1273	printf "\n\n *** directory:"
1274	printf "\n $catalogname"
1275	printf "\n was created\n"
1276	else
1277	printf "\n\n +++ OUTPUT-file:"
1278	printf "\n $filename"
1279	printf "\n cannot be created, because directory does not exist"
1280	printf "\n and cannot be created either"
1281	printf "\n"
1282	locat=output ; exit
1283	fi 2>/dev/null
1284	else
1285	printf "\n\n +++ OUTPUT-file:"
1286	printf "\n $filename"
1287	printf "\n cannot be created, although directory exists"
1288	printf "\n"
1289	locat=output ; exit
1290	fi
1291	fi 2>/dev/null
1292	else
1293
1294	# ZYKLUSNUMMER FESTSTELLEN
1295	ls -1 -d $filename > filelist 2>/dev/null
1296	ls -1 -d $filename.* >> filelist 2>/dev/null
1297	while read zeile
1298	do
1299	cycle=$(print $zeile \| cut -f2 -d".")
1300	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1301	then
1302	(( icycle = 1 ))
1303	else
1304	(( icycle = $cycle + 1 ))
1305	fi
1306	if (( icycle > maxcycle ))
1307	then
1308	(( maxcycle = icycle ))
1309	fi
1310	done <filelist
1311	rm filelist
1312	fi
1313
1314	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1315	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1316	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1317	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1318	if [[ "${actionout[$i]}" != a ]]
1319	then
1320	if (( maxcycle > 0 ))
1321	then
1322	filename=${filename}.$maxcycle
1323	if cat /dev/null > $filename
1324	then
1325	rm $filename
1326	else
1327	printf "\n +++ OUTPUT-file:"
1328	printf "\n $filename"
1329	printf "\n cannot be created"
1330	locat=output ; exit
1331	fi
1332	fi
1333	else
1334	(( maxcycle = maxcycle - 1 ))
1335	if (( maxcycle > 0 ))
1336	then
1337	filename=${filename}.$maxcycle
1338	fi
1339	fi
1340
1341	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1342	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1343	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1344	pathout[$i]=$filename
1345	if (( maxcycle > 0 ))
1346	then
1347	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1348	else
1349	frelout[$i]=${fname}${endout[$i]}
1350	fi
1351
1352	fi
1353	done
1354
1355
1356	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1357	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1358	then
1359	if [[ "$dvrp_inc" = "" ]]
1360	then
1361	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1362	printf "\n This is required for the dvrp_graphics package.\n"
1363	locat=dvrp; exit
1364	fi
1365	if [[ "$dvrp_lib" = "" ]]
1366	then
1367	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1368	printf "\n This is required for the dvrp_graphics package.\n"
1369	locat=dvrp; exit
1370	fi
1371	fi
1372
1373
1374	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1375	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1376	# UEBERSETZT ZU WERDEN)
1377	if [[ "$mainprog" = "" && "$executable" = "" ]]
1378	then
1379	printf "\n +++ neither main program nor executable defined"
1380	locat=source; exit
1381	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1382	then
1383	printf "\n +++ main program as well as executable defined"
1384	locat=source; exit
1385	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1386	then
1387	do_compile=false
1388	fi
1389
1390
1391	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
1392	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
1393	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
1394	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
1395	then
1396	rm -rf SOURCES_FOR_RUN_$fname
1397	mkdir SOURCES_FOR_RUN_$fname
1398	fi
1399
1400
1401	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1402	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1403	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1404	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1405	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1406	then
1407
1408	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1409	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1410
1411
1412	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1413	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1414	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1415	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1416	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1417	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1418	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1419	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1420	# GESAMMELT
1421	if [[ "$source_list" = WRITE_PERMIT ]]
1422	then
1423
1424	source_list=""
1425	cd $source_path
1426
1427
1428	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1429	Names=$(ls -1 *.f90 2>&1)
1430	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1431	Names=$(ls -1 *.F90 2>&1)
1432	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1433	Names=$(ls -1 *.F 2>&1)
1434	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1435	Names=$(ls -1 *.f 2>&1)
1436	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1437	Names=$(ls -1 *.c 2>&1)
1438	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1439
1440
1441	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1442	for dateiname in $Filenames
1443	do
1444	if [[ -w $dateiname ]]
1445	then
1446	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1447	then
1448	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1449	source_list=$source_list"$dateiname "
1450	fi
1451	fi
1452	done
1453
1454	cd - > /dev/null
1455
1456
1457	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1458	then
1459
1460	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1461	source_list=""
1462	cd $source_path
1463
1464
1465	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1466	if [[ ! -d .svn ]]
1467	then
1468	printf "\n\n +++ source directory"
1469	printf "\n \"$source_path\" "
1470	printf "\n is not under control of \"subversion\"."
1471	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1472	fi
1473
1474
1475	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1476	Filenames=""
1477	svn status > tmp_mrun
1478	while read line
1479	do
1480	firstc=`echo $line \| cut -c1`
1481	if [[ $firstc = M \|\| $firstc = "?" ]]
1482	then
1483	Name=`echo "$line" \| cut -c8-`
1484	extension=`echo $Name \| cut -d. -f2`
1485	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1486	then
1487	Filenames="$Filenames "$Name
1488	fi
1489	fi
1490	done < tmp_mrun
1491
1492
1493	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1494	for dateiname in $Filenames
1495	do
1496	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1497	source_list=$source_list"$dateiname "
1498	done
1499
1500	cd - > /dev/null
1501
1502
1503	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1504	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1505	# VORHANDEN
1506	elif [[ "$source_list" != "" && $restart_run != true ]]
1507	then
1508
1509	cd $source_path
1510
1511	for filename in $source_list
1512	do
1513
1514	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1515	if [[ $(print $filename \| grep -c "/") != 0 ]]
1516	then
1517	printf "\n +++ source code file: $filename"
1518	printf "\n must not contain (\"/\") "
1519	locat=source; exit
1520	fi
1521
1522	if [[ ! -f $filename ]]
1523	then
1524	printf "\n +++ source code file: $filename"
1525	printf "\n does not exist"
1526	locat=source; exit
1527	else
1528	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1529	fi
1530
1531	done
1532
1533	cd - > /dev/null
1534
1535	fi
1536
1537
1538	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1539	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1540	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1541	if [[ $restart_run != true ]]
1542	then
1543
1544	if [[ ! -f "$source_path/$mainprog" ]]
1545	then
1546	printf "\n\n +++ main program: $mainprog"
1547	printf "\n does not exist in source directory"
1548	printf "\n \"$source_path\"\n"
1549	locat=source; exit
1550	else
1551	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1552	then
1553	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1554	source_list=${mainprog}" $source_list"
1555	fi
1556	fi
1557	fi
1558
1559
1560	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1561	if [[ $restart_run != true && "$add_source_path" != "" ]]
1562	then
1563
1564	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1565	if [[ ! -d $add_source_path ]]
1566	then
1567	printf "\n\n +++ WARNING: additional source code directory"
1568	printf "\n \"$add_source_path\" "
1569	printf "\n does not exist or is not a directory."
1570	printf "\n No source code will be used from this directory!\n"
1571	add_source_path=""
1572	sleep 3
1573	else
1574
1575	cd $add_source_path
1576
1577	Names=$(ls -1 *.f90 2>&1)
1578	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1579	Names=$(ls -1 *.F90 2>&1)
1580	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1581	Names=$(ls -1 *.F 2>&1)
1582	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1583	Names=$(ls -1 *.f 2>&1)
1584	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1585	Names=$(ls -1 *.c 2>&1)
1586	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1587
1588	cd - > /dev/null
1589	cd SOURCES_FOR_RUN_$fname
1590
1591	for dateiname in $AddFilenames
1592	do
1593	if [[ -f $dateiname ]]
1594	then
1595	printf "\n +++ source code file \"$dateiname\" found in additional"
1596	printf "\n source code directory \"$add_source_path\" "
1597	printf "\n as well as in directory \"$source_path\"."
1598	locat=source; exit
1599	fi
1600
1601	cp $add_source_path/$dateiname .
1602	source_list="$source_list $dateiname"
1603
1604	# Default User-Interface von der Liste entfernen, falls Datei
1605	# ein User-Interface enthaelt
1606	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1607	then
1608	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1609	then
1610	rm -rf user_interface.f90
1611	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1612	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1613	printf "\n since a user-interface is found in file"
1614	printf "\n \"$add_source_path/$dateiname\" \n"
1615	sleep 3
1616	else
1617	printf "\n\n *** user-interface file \"$dateiname\" "
1618	printf "\n added to the files to be translated \n"
1619	sleep 3
1620	fi
1621	fi
1622	done
1623
1624	cd - > /dev/null
1625	fi
1626	fi
1627
1628
1629	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1630	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1631	if [[ $restart_run != true && -n $package_list ]]
1632	then
1633
1634	cd $source_path
1635
1636	for package in $package_list
1637	do
1638
1639	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1640
1641	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1642	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1643	# LIEFERT
1644	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1645
1646
1647	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1648	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1649	for source_list_name in $package_source_list
1650	do
1651	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1652	then
1653
1654	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1655	ending=`echo $source_list_name \| cut -f2 -d.`
1656	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1657	then
1658	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1659	source_list="$source_list $source_list_name"
1660	fi
1661	fi
1662	done
1663	done
1664
1665	cd - > /dev/null
1666	fi
1667
1668
1669	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1670	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1671	if [[ "$restart_run" != true ]]
1672	then
1673	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1674	if [[ ! -f $makefile ]]
1675	then
1676	printf "\n +++ file \"$makefile\" does not exist"
1677	locat=make; exit
1678	else
1679	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1680	fi
1681	fi
1682
1683	fi # do_compile=true
1684
1685
1686	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1687	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1688	if [[ $do_compile = true ]]
1689	then
1690
1691	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1692	# ZUSAMMENSETZEN
1693	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1694	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1695	then
1696	cpp_options="${cpp_options},-D__ibm=__ibm"
1697	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1698	then
1699	cpp_options="$cpp_options -D__nec"
1700	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1701	then
1702	cpp_options="$cpp_options -D__lc"
1703	else
1704	cpp_options="$cpp_options -D__$localhost"
1705	fi
1706
1707	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1708	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1709	then
1710	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1711	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1712	else
1713	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1714	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1715	fi
1716
1717	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1718	if [[ -n $package_list ]]
1719	then
1720	for package in $package_list
1721	do
1722	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1723	then
1724	if [[ $package != "dvrp_graphics+1PE" ]]
1725	then
1726	cpp_options="${cpp_options},-D__$package=__$package"
1727	else
1728	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1729	export use_seperate_pe_for_dvrp_output=true
1730	fi
1731	else
1732	if [[ $package != "dvrp_graphics+1PE" ]]
1733	then
1734	cpp_options="$cpp_options -D__$package"
1735	else
1736	cpp_options="$cpp_options -D__dvrp_graphics"
1737	export use_seperate_pe_for_dvrp_output=true
1738	fi
1739	fi
1740	done
1741	fi
1742
1743	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1744	if [[ -n $cpp_opts ]]
1745	then
1746	for popts in $cpp_opts
1747	do
1748	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1749	then
1750	cpp_options="${cpp_options},-D__$popts=__$popts"
1751	else
1752	cpp_options="$cpp_options -D__$popts"
1753	fi
1754	done
1755	fi
1756
1757	else
1758
1759
1760	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1761	if [[ $do_remote = false ]]
1762	then
1763	if [[ ! -f $executable ]]
1764	then
1765	printf "\n +++ executable file: $executable"
1766	printf "\n does not exist"
1767	locat=executable; exit
1768	fi
1769	fi
1770	fi
1771
1772
1773	# JOBMODUS FESTSTELLEN
1774	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1775	then
1776	jobmo=BATCH
1777	else
1778	jobmo=INTERACTIVE
1779	fi
1780
1781
1782	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1783	# DURCH BENUTZER ANDERWEITIG VEREINBART
1784	if [[ "$compiler_name" = "" ]]
1785	then
1786
1787	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1788	locat=compiler_name; exit
1789
1790	fi
1791
1792
1793	# COMPILER AUF NECK UEBERSCHREIBEN
1794	[[ $localhost = neck ]] && compiler_name=mpif90
1795
1796
1797
1798	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1799	kennung=$RANDOM
1800	if [[ "$tmp_user_catalog" = "" ]]
1801	then
1802	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1803	then
1804	tmp_user_catalog=$TMPDIR
1805	elif [[ $localhost = nech ]]
1806	then
1807	tmp_user_catalog=$WRKSHR
1808	else
1809	tmp_user_catalog=/tmp
1810	fi
1811	fi
1812	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1813
1814
1815	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1816	# BESTIMMEN
1817	if [[ "$tmp_data_catalog" = "" ]]
1818	then
1819	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1820	then
1821	tmp_data_catalog=$WORK/mrun_restart_data
1822	elif [[ $localhost = nech ]]
1823	then
1824	tmp_data_catalog=$WRKSHR/mrun_restart_data
1825	else
1826	tmp_data_catalog=/tmp/mrun_restart_data
1827	fi
1828	fi
1829
1830
1831	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1832	# ERSETZEN
1833	if [[ $do_remote = false && $do_compile = true ]]
1834	then
1835	eval fopts=\"$fopts\"
1836	eval lopts=\"$lopts\"
1837	fi
1838
1839
1840
1841	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1842	fopts="$fopts $netcdf_inc $dvrp_inc"
1843	lopts="$lopts $netcdf_lib $dvrp_lib"
1844	ROPTS="$ropts"
1845	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
1846	then
1847	XOPT="-X $numprocs"
1848	fi
1849
1850
1851
1852	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1853	# GRAMM BENOETIGT
1854	done=false
1855	while [[ $done = false ]]
1856	do
1857	cputime=$cpumax
1858	if (( $cputime == 0 ))
1859	then
1860	printf "\n +++ cpu-time is undefined"
1861	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1862	printf "\n >>> "
1863	read cputime 1>/dev/null 2>&1
1864	else
1865	done=true
1866	fi
1867	cpumax=$cputime
1868	done
1869
1870	(( minuten = cputime / 60 ))
1871	(( sekunden = cputime - minuten * 60 ))
1872
1873
1874	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1875	if [[ $do_batch = true ]]
1876	then
1877	done=false
1878	while [[ $done = false ]]
1879	do
1880	if (( memory == 0 ))
1881	then
1882	printf "\n +++ memory demand is undefined"
1883	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1884	printf "\n >>> "
1885	read memory 1>/dev/null 2>&1
1886	else
1887	done=true
1888	fi
1889	done
1890	fi
1891
1892
1893	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1894	if [[ $do_remote = true && -z $remote_username ]]
1895	then
1896	while [[ -z $remote_username ]]
1897	do
1898	printf "\n +++ username on remote host \"$host\" is undefined"
1899	printf "\n >>> Please type username:"
1900	printf "\n >>> "
1901	read remote_username
1902	done
1903	mc="$mc -u$remote_username"
1904	fi
1905
1906	###########################################################################
1907	# HEADER-AUSGABE
1908	###########################################################################
1909
1910
1911	calltime=$(date)
1912	printf "\n"
1913	# [[ $silent = false ]] && clear
1914	printf "#--------------------------------------------------------------# \n"
1915	printf "\| $version$calltime \| \n"
1916	printf "\| \| \n"
1917	spalte1="called on:"; spalte2=$localhost_realname
1918	printf "\| $spalte1$spalte2 \| \n"
1919	if [[ $local_compile = false ]]
1920	then
1921	if [[ $do_remote = true ]]
1922	then
1923	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1924	else
1925	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1926	fi
1927	else
1928	spalte1="compiling test only!"; spalte2=""
1929	fi
1930	printf "\| $spalte1$spalte2 \| \n"
1931	if [[ -n $numprocs ]]
1932	then
1933	spalte1="number of PEs:"; spalte2=$numprocs
1934	printf "\| $spalte1$spalte2 \| \n"
1935	fi
1936	if [[ -n $tasks_per_node ]]
1937	then
1938	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1939	printf "\| $spalte1$spalte2 \| \n"
1940	fi
1941	if [[ $threads_per_task != 1 ]]
1942	then
1943	spalte1="threads per task:"; spalte2="$threads_per_task"
1944	printf "\| $spalte1$spalte2 \| \n"
1945	fi
1946	printf "\| \| \n"
1947	if [[ $do_compile = true ]]
1948	then
1949	spalte1=cpp-directives:; spalte2=$cpp_options
1950	printf "\| $spalte1$spalte2 \| \n"
1951	zeile=$(echo "$cpp_options" \| cut -c41-)
1952	while [[ "$zeile" != "" ]]
1953	do
1954	spalte1=""
1955	spalte2=$zeile
1956	printf "\| $spalte1$spalte2 \| \n"
1957	zeile=$(echo "$zeile" \| cut -c41-)
1958	done
1959
1960	spalte1=compiler-options:; spalte2="$fopts"
1961	printf "\| $spalte1$spalte2 \| \n"
1962	zeile=$(echo "$fopts" \| cut -c41-)
1963	while [[ "$zeile" != "" ]]
1964	do
1965	spalte1=""
1966	spalte2=$zeile
1967	printf "\| $spalte1$spalte2 \| \n"
1968	zeile=$(echo "$zeile" \| cut -c41-)
1969	done
1970
1971	spalte1=linker-options:; spalte2=$lopts
1972	printf "\| $spalte1$spalte2 \| \n"
1973	zeile=$(echo "$lopts" \| cut -c41-)
1974	while [[ "$zeile" != "" ]]
1975	do
1976	spalte1=""
1977	spalte2=$zeile
1978	printf "\| $spalte1$spalte2 \| \n"
1979	zeile=$(echo "$zeile" \| cut -c41-)
1980	done
1981
1982	spalte1="main program":; spalte2=$mainprog
1983	printf "\| $spalte1$spalte2 \| \n"
1984	else
1985	spalte1=executable:; spalte2=$executable
1986	printf "\| $spalte1$spalte2 \| \n"
1987	fi
1988	printf "\| \| \n"
1989	spalte1="base name of files":; spalte2=$fname
1990	printf "\| $spalte1$spalte2 \| \n"
1991	if [[ $fname != $afname ]]
1992	then
1993	spalte1="base name of input files":; spalte2=$afname
1994	printf "\| $spalte1$spalte2 \| \n"
1995	fi
1996	spalte1="INPUT control list":; spalte2=$input_list
1997	printf "\| $spalte1$spalte2 \| \n"
1998	spalte1="OUTPUT control list":; spalte2=$output_list
1999	printf "\| $spalte1$spalte2 \| \n"
2000
2001	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2002	then
2003	spalte1="memory demand / PE":; spalte2="$memory MB"
2004	printf "\| $spalte1$spalte2 \| \n"
2005	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2006	printf "\| $spalte1$spalte2 \| \n"
2007	fi
2008
2009	if [[ $do_compile = true ]]
2010	then
2011	printf "\| \| \n"
2012	printf "\| Files to be compiled: \| \n"
2013	zeile=$source_list
2014	while [[ "$zeile" != "" ]]
2015	do
2016	spalte3=$zeile
2017	printf "\| $spalte3 \| \n"
2018	zeile=$(echo "$zeile" \| cut -c61-)
2019	done
2020	fi
2021	printf "#--------------------------------------------------------------#"
2022
2023
2024
2025	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2026	if [[ $do_trace = true ]]
2027	then
2028	(( i = 0 ))
2029	while (( i < iin ))
2030	do
2031	(( i = i + 1 ))
2032	if (( i == 1 ))
2033	then
2034	printf "\n\n >>> INPUT-file assignments:\n"
2035	fi
2036	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2037	done
2038	(( i = 0 ))
2039	while (( i < iout ))
2040	do
2041	(( i = i + 1 ))
2042	if (( i == 1 ))
2043	then
2044	printf "\n\n >>> OUTPUT-file assignments:\n"
2045	fi
2046	printf "\n ${localout[$i]} : ${pathout[$i]}"
2047	done
2048	(( i = 0 ))
2049	while (( i < iic ))
2050	do
2051	(( i = i + 1 ))
2052	if (( i == 1 ))
2053	then
2054	printf "\n\n >>> INPUT-commands:\n"
2055	fi
2056	printf "\n ${in_command[$i]}"
2057	done
2058	(( i = 0 ))
2059	while (( i < ioc ))
2060	do
2061	(( i = i + 1 ))
2062	if (( i == 1 ))
2063	then
2064	printf "\n\n >>> OUTPUT-commands:\n"
2065	fi
2066	printf "\n ${out_command[$i]}"
2067	done
2068	fi
2069
2070
2071	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2072	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2073	then
2074	antwort=dummy
2075	printf "\n\n"
2076	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2077	do
2078	printf " >>> everything o.k. (y/n) ? "
2079	read antwort
2080	done
2081	if [[ $antwort = n \|\| $antwort = N ]]
2082	then
2083	locat=user_abort; (( iec = 0 )); exit
2084	fi
2085	if [[ $do_batch = true ]]
2086	then
2087	printf " >>> batch-job will be created and submitted"
2088	else
2089	if [[ $local_compile = false ]]
2090	then
2091	printf " >>> MRUN will now continue to execute on this machine"
2092	else
2093	printf " >>> a test compilation will now be carried out on this machine"
2094	fi
2095	fi
2096	fi
2097
2098
2099
2100
2101	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2102	# CHENDE AKTIONEN DURCHGEFUEHRT
2103	if [[ $do_batch = false ]]
2104	then
2105
2106
2107	# TEMPORAEREN KATALOG ERZEUGEN
2108	mkdir -p $TEMPDIR
2109	chmod go+rx $TEMPDIR
2110	tmpcreate=true
2111
2112
2113	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2114	# TEMPORAERES VERZEICHNIS KOPIEREN
2115	if [[ $do_compile = true ]]
2116	then
2117
2118	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2119	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2120	if [[ $localhost = nech ]]
2121	then
2122	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2123	if mkdir -p $TEMPDIR_COMPILE
2124	then
2125	printf "\n *** \"$TEMPDIR_COMPILE\" "
2126	printf "\n is generated as temporary directory for cross compiling\n"
2127	else
2128	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2129	printf "\n needed for cross compilation failed"
2130	locat=compile
2131	exit
2132	fi
2133	else
2134	TEMPDIR_COMPILE=$TEMPDIR
2135	fi
2136
2137
2138	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2139	line=""
2140	grep "%depository_path" $config_file > tmp_mrun
2141	while read line
2142	do
2143	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2144	then
2145	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2146	then
2147	global_depository_path=`echo $line \| cut -d" " -s -f2`
2148	fi
2149	fi
2150	done < tmp_mrun
2151
2152	line=""
2153	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2154	while read line
2155	do
2156	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2157	then
2158	local_depository_path=`echo $line \| cut -d" " -s -f2`
2159	fi
2160	done < tmp_mrun
2161
2162	if [[ "$local_depository_path" = "" ]]
2163	then
2164	if [[ "$global_depository_path" != "" ]]
2165	then
2166	local_depository_path=$global_depository_path
2167	else
2168	printf "\n\n +++ no depository path found in configuration file"
2169	printf "\n for local host \"$localhost\" "
2170	printf "\n please set \"\%depository_path\" in configuration file\n"
2171	locat=config_file; exit
2172	fi
2173	fi
2174	eval local_depository_path=$local_depository_path
2175
2176	basename=`print $mainprog \| cut -f1 -d"."`
2177	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2178	if [[ ! -f $make_depository ]]
2179	then
2180	printf "\n"
2181	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2182	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2183	else
2184	cp $make_depository $TEMPDIR_COMPILE
2185	cd $TEMPDIR_COMPILE
2186	tar -xf $make_depository > /dev/null 2>&1
2187	cd - > /dev/null
2188	fi
2189
2190	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2191
2192	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2193	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2194	# MAKEFILE EINTRAGEN
2195	cd $TEMPDIR_COMPILE
2196	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2197	if [[ "$interface_file" != "" ]]
2198	then
2199	interface_file=`echo $interface_file \| cut -d"." -f1`
2200	mv Makefile Makefile_old
2201	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2202	fi
2203	cd - > /dev/null
2204	else
2205	cp $executable ${TEMPDIR}/a.out
2206	fi
2207
2208
2209	# WECHSEL IN TEMPORAEREN KATALOG
2210	cd $TEMPDIR
2211	printf "\n *** changed to temporary directory: $TEMPDIR"
2212
2213
2214	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2215	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2216	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2217	# ERMITTELN
2218	(( i = 0 ))
2219	while (( i < iout ))
2220	do
2221	(( i = i + 1 ))
2222	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2223	then
2224	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2225	else
2226	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2227	fi
2228	done
2229
2230
2231	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2232	if [[ $do_compile = true ]]
2233	then
2234
2235
2236	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2237	printf "\n\n\n *** compilation starts \n$striche\n"
2238	printf " *** compilation with make using following options:\n"
2239	printf " compilername: $compiler_name\n"
2240	printf " options: $fopts\n"
2241	printf " preprocessor-directives: $cpp_options \n"
2242	printf " linker-options: $lopts \n"
2243	printf " source code files: $source_list \n"
2244
2245	if [[ $localhost = nech ]]
2246	then
2247	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2248	cp $TEMPDIR_COMPILE/a.out .
2249	[[ $? != 0 ]] && compile_error=true
2250	rm -rf $TEMPDIR_COMPILE
2251	elif [[ $localhost = lcsgib ]]
2252	then
2253	printf " compiler is called via ssh on \"bicegate\" \n"
2254	ssh 130.73.232.102 -l $usern ". /usr/share/modules/init/bash; module load mpt; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2255	[[ ! -f a.out ]] && compile_error=true
2256	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2257	elif [[ $localhost = lcsgih ]]
2258	then
2259	printf " compiler is called via ssh on \"hicegate\" \n"
2260	ssh 130.75.4.102 -l $usern ". /usr/share/modules/init/bash; module load mpt; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
2261	# ssh 130.75.4.102 -l $usern ". /usr/share/modules/init/bash; module load mvapich2; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
2262	# print ". /usr/share/modules/init/bash; module load mpt; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" " \| ssh ${usern}@130.75.4.102 2>&1
2263	[[ ! -f a.out ]] && compile_error=true
2264	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2265	else
2266	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2267	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2268	fi
2269
2270	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2271	then
2272	printf "\n +++ error occured while compiling or linking"
2273	locat=compile
2274
2275	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
2276	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
2277	# then
2278	exit
2279	# else
2280	# locat=normal
2281	# fi
2282	else
2283	printf "$striche\n *** compilation finished \n"
2284	fi
2285	fi
2286
2287
2288	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2289	if [[ $local_compile = true ]]
2290	then
2291	cd $HOME
2292	rm -rf $TEMPDIR
2293	locat=local_compile; exit
2294	fi
2295
2296
2297	# BEREITSTELLEN DER INPUT-DATEIEN
2298	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2299	(( i = 0 ))
2300	while (( i < iin ))
2301	do
2302	(( i = i + 1 ))
2303	if (( i == 1 ))
2304	then
2305	printf "\n\n *** providing INPUT-files:\n$striche"
2306	fi
2307
2308
2309	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2310	if [[ "${transin[$i]}" = unavailable ]]
2311	then
2312	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2313	then
2314	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2315	printf "\n is not available!"
2316	else
2317	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2318	printf "\n is not available!"
2319	fi
2320	continue
2321	fi
2322
2323	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2324	files_for_pes=false; datentyp=file
2325	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2326	then
2327	files_for_pes=true; datentyp=directory
2328	actionin[$i]=""
2329	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2330	then
2331	actionin[$i]=""
2332	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2333	then
2334	files_for_pes=true; datentyp=directory
2335	actionin[$i]="ar"
2336	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2337	then
2338	actionin[$i]="ar"
2339	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2340	then
2341	files_for_pes=true; datentyp=directory
2342	actionin[$i]="fl"
2343	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2344	then
2345	actionin[$i]="fl"
2346	fi
2347
2348	if [[ $files_for_pes = true ]]
2349	then
2350	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2351	else
2352	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2353	fi
2354
2355	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2356	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2357	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2358	# SERVER ZU HOLEN
2359	if [[ "${actionin[$i]}" = fl ]]
2360	then
2361	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2362	if [[ $files_for_pes = false ]]
2363	then
2364	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2365	then
2366	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2367	got_tmp[$i]=true
2368	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2369	then
2370	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2371	printf "\n *** trying to use backup copy in \"$WORK\" "
2372	cp $WORK/${frelin[$i]} ${localin[$i]}
2373	else
2374	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2375	printf "\n or \"$tmp_data_catalog\" does not exist!"
2376	printf "\n *** trying to get copy from archive"
2377	actionin[$i]=ar
2378	fi
2379	else
2380	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2381	then
2382	mkdir ${localin[$i]}
2383	cd $tmp_data_catalog/${frelin[$i]}
2384	for file in $(ls *)
2385	do
2386	ln $file $TEMPDIR/${localin[$i]}
2387	done
2388	cd $TEMPDIR
2389	got_tmp[$i]=true
2390	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2391	then
2392	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2393	printf "\n *** trying to use backup copy in \"$WORK\" "
2394	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2395	else
2396	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2397	printf "\n or \"$tmp_data_catalog\" does not exist!"
2398	printf "\n *** trying to get copy from archive"
2399	actionin[$i]=ar
2400	fi
2401	fi
2402	fi
2403
2404
2405	# DATEI LIEGT AUF ARCHIV-SERVER
2406	if [[ "${actionin[$i]}" = ar ]]
2407	then
2408
2409	if [[ $files_for_pes = false ]]
2410	then
2411	printf "\n file will be restored from archive-system ($archive_system)!"
2412	else
2413	printf "\n directory will be restored from archive-system ($archive_system)!"
2414	fi
2415
2416	file_restored=false
2417
2418	if [[ $archive_system = asterix ]]
2419	then
2420	do_stagein=true
2421	(( stagein_anz = 0 ))
2422	while [[ $do_stagein = true ]]
2423	do
2424	if [[ $files_for_pes = false ]]
2425	then
2426	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2427	else
2428	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2429	fi
2430	cat STAGEIN_OUTPUT
2431	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2432	then
2433	file_restored=true
2434	do_stagein=false
2435	else
2436	(( stagein_anz = stagein_anz + 1 ))
2437	if (( stagein_anz == 10 ))
2438	then
2439	printf "\n +++ stagein stoped after 10 tries"
2440	locat=stage
2441	exit
2442	fi
2443	printf "\n +++ restoring from archive failed, trying again:"
2444	sleep 900
2445	fi
2446	done
2447	elif [[ $archive_system = DMF ]]
2448	then
2449	if [[ $files_for_pes = false ]]
2450	then
2451	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2452	locat=DMF
2453	exit
2454	else
2455	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2456	cp -r $ARCHIVE/${frelin[$i]} $PWD
2457	file_restored=true
2458	fi
2459	elif [[ $archive_system = tivoli ]]
2460	then
2461	if [[ $files_for_pes = false ]]
2462	then
2463	if [[ $localhost = ibmh ]]
2464	then
2465	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2466	else
2467	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2468	fi
2469	else
2470	(( inode = 0 ))
2471	while (( inode < nodes ))
2472	do
2473	if [[ $localhost = ibmh ]]
2474	then
2475	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2476	else
2477	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2478	fi
2479	(( inode = inode + 1 ))
2480	done
2481	fi
2482	file_restored=true
2483	elif [[ $archive_system = ut ]]
2484	then
2485	if [[ $files_for_pes = false ]]
2486	then
2487	cp $UT/${frelin[$i]} .
2488	else
2489	(( inode = 0 ))
2490	while (( inode < nodes ))
2491	do
2492	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2493	(( inode = inode + 1 ))
2494	done
2495	fi
2496	file_restored=true
2497	else
2498	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2499	locat=rearchive
2500	exit
2501	fi
2502
2503	if [[ $file_restored = true ]]
2504	then
2505
2506	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2507	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2508	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2509	if [[ $files_for_pes = false ]]
2510	then
2511	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2512	else
2513	mkdir $tmp_data_catalog/${frelin[$i]}
2514	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2515	fi
2516	got_tmp[$i]=true
2517
2518	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2519	mv ${frelin[$i]} ${localin[$i]}
2520
2521	fi
2522	fi
2523
2524
2525	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2526	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2527	then
2528
2529	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2530	then
2531
2532	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2533	printf "\n file will be provided for $numprocs processors"
2534	mkdir ${localin[$i]}
2535	ival=$numprocs
2536	(( ii = 0 ))
2537	while (( ii <= ival-1 ))
2538	do
2539	if (( ii < 10 ))
2540	then
2541	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2542	elif (( ii < 100 ))
2543	then
2544	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2545	elif (( ii < 1000 ))
2546	then
2547	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2548	else
2549	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2550	fi
2551	(( ii = ii + 1 ))
2552	done
2553
2554	else
2555
2556	if [[ $files_for_pes = true ]]
2557	then
2558
2559	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2560	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2561	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2562	# PER MOVE UMBENANNT WERDEN
2563	printf "\n providing $numprocs files for the respective processors"
2564	mkdir ${localin[$i]}
2565	if [[ $link_local_input = true ]]
2566	then
2567	printf " using ln -f\n"
2568	cd ${absnamein[$i]}
2569	for file in $(ls *)
2570	do
2571	ln -f $file ${localin[$i]}
2572	done
2573	cd $TEMPDIR
2574	fi
2575	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
2576	if [[ ! -f "${localin[$i]}/_0000" ]]
2577	then
2578	if [[ $link_local_input = true ]]
2579	then
2580	printf " ln failed for .../_0000, using cp...\n"
2581	fi
2582	cp -r ${absnamein[$i]}/* ${localin[$i]}
2583	fi
2584
2585	else
2586	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2587	if [[ $link_local_input = true ]]
2588	then
2589	printf " using ln -f\n"
2590	ln -f ${absnamein[$i]} ${localin[$i]}
2591	fi
2592	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
2593	if [[ ! -f "${localin[$i]}" ]]
2594	then
2595	if [[ $link_local_input = true ]]
2596	then
2597	printf " ln failed, using cp...\n"
2598	fi
2599	cp ${absnamein[$i]} ${localin[$i]}
2600	fi
2601	fi
2602	fi
2603	fi
2604
2605	done
2606	if (( i != 0 ))
2607	then
2608	printf "\n$striche\n *** all INPUT-files provided \n"
2609	fi
2610
2611
2612	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2613	# LESEN VON PALM)
2614	cat > ENVPAR << %%END%%
2615	&envpar run_identifier = '$fname', host = '$localhost',
2616	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2617	maximum_cpu_time_allowed = ${cpumax}.,
2618	revision = '$global_revision' /
2619
2620	%%END%%
2621
2622
2623	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2624	(( i = 0 ))
2625	while (( i < iic ))
2626	do
2627	(( i = i + 1 ))
2628	if (( i == 1 ))
2629	then
2630	printf "\n\n *** execution of INPUT-commands:\n$striche"
2631	fi
2632	printf "\n >>> ${in_command[$i]}"
2633	eval ${in_command[$i]}
2634	if (( i == iic ))
2635	then
2636	printf "\n$striche\n"
2637	fi
2638	done
2639
2640
2641	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2642	cpurest=${cpumax}.
2643
2644
2645	# PROGRAMMSTART
2646	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2647	PATH=$PATH:$TEMPDIR
2648
2649	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2650	then
2651	if [[ "$ENVIRONMENT" = BATCH ]]
2652	then
2653	printf "\n +++ debug is allowed in interactive mode only"
2654	locat=debug
2655	exit
2656	fi
2657	if [[ $localhost = decalpha ]]
2658	then
2659	dxladebug a.out
2660	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2661	then
2662
2663	# SETUP THE IBM MPI ENVIRONMENT
2664	export MP_SHARED_MEMORY=yes
2665	export AIXTHREADS_SCOPE=S
2666	export OMP_NUM_THREADS=$threads_per_task
2667	export AUTHSTATE=files
2668	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2669
2670	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2671	export MP_ADAPTER_USE=shared
2672	export MP_CPU_USE=multiple
2673	export MP_TIMEOUT=1200
2674
2675	unset MP_TASK_AFFINITY
2676
2677	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2678	#(( ii = 1 ))
2679	#while (( ii <= $numprocs ))
2680	#do
2681	# echo $localhost_realname >> hostfile
2682	# (( ii = ii + 1 ))
2683	#done
2684	#export MP_HOSTFILE=hostfile
2685
2686	if [[ "$LOADLBATCH" = yes ]]
2687	then
2688	totalview poe a.out $ROPTS
2689	else
2690	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2691	export TVDSVRLAUNCHCMD=ssh
2692	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2693	fi
2694	else
2695	printf "\n +++ no debug available on \"$localhost\" "
2696	printf "\n or not implemented in mrun so far"
2697	locat=debug
2698	exit
2699	fi
2700	else
2701	if [[ -n $numprocs ]]
2702	then
2703
2704	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2705	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2706	then
2707	# SETUP THE IBM MPI ENVIRONMENT
2708	export MP_SHARED_MEMORY=yes
2709	export AIXTHREAD_SCOPE=S
2710	export OMP_NUM_THREADS=$threads_per_task
2711	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2712	export AUTHSTATE=files
2713	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2714	# export MP_PRINTENV=yes
2715
2716	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2717	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2718	export MP_WAIT_MODE=poll
2719	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2720	# export MP_EAGER_LIMIT=65535
2721
2722	# # TESTWEISE FUER TURBOMPI (JAN 05)
2723	# export MPJ_MTAB=128
2724	# export MPJ_ALLTOALL=1
2725	# export MPJ_ALLTOALLV=1
2726
2727	if [[ "$LOADLBATCH" = yes ]]
2728	then
2729	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2730	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2731	then
2732	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2733	else
2734	poe ./a.out $ROPTS
2735	fi
2736	else
2737	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2738	then
2739	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2740	elif [[ $localhost = ibmy ]]
2741	then
2742	if [[ -f $hostfile ]]
2743	then
2744	cp $hostfile hostfile
2745	else
2746	(( ii = 1 ))
2747	while (( ii <= $numprocs ))
2748	do
2749	echo $localhost_realname >> hostfile
2750	(( ii = ii + 1 ))
2751	done
2752	fi
2753	export MP_HOSTFILE=hostfile
2754	./a.out -procs $tasks_per_node $ROPTS
2755	else
2756	if [[ "$host_file" = "" ]]
2757	then
2758	printf "\n +++ no hostfile given in configuration file"
2759	locat=config_file
2760	exit
2761	else
2762	eval host_file=$host_file
2763	fi
2764	export MP_HOSTFILE=$host_file
2765	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2766	fi
2767	fi
2768	elif [[ $host = nech \|\| $host = neck ]]
2769	then
2770	(( ii = nodes ))
2771	if [[ $ii = 1 ]]
2772	then
2773	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2774	export MPIPROGINF=YES
2775	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2776	echo "*** execution on single node with mpirun"
2777	mpirun -np $numprocs ./a.out $ROPTS
2778	else
2779	(( i = 0 ))
2780	while (( i < ii ))
2781	do
2782	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2783	(( i = i + 1 ))
2784	done
2785
2786	echo "#!/bin/sh" > mpi_exec_shell
2787	echo " " >> mpi_exec_shell
2788	echo "set -u" >> mpi_exec_shell
2789	echo "F_ERRCNT=0" >> mpi_exec_shell
2790	echo "MPIPROGINV=YES" >> mpi_exec_shell
2791	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2792	echo "cpurest=$cpurest" >> mpi_exec_shell
2793	echo "fname=$fname" >> mpi_exec_shell
2794	echo "localhost=$localhost" >> mpi_exec_shell
2795	echo "return_addres=$return_addres" >> mpi_exec_shell
2796	echo "return_username=$return_username" >> mpi_exec_shell
2797	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2798	echo "write_binary=$write_binary" >> mpi_exec_shell
2799	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2800	echo " " >> mpi_exec_shell
2801	echo "export F_ERRCNT" >> mpi_exec_shell
2802	echo "export MPIPROGINV" >> mpi_exec_shell
2803	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2804	echo "export cpurest" >> mpi_exec_shell
2805	echo "export fname" >> mpi_exec_shell
2806	echo "export localhost" >> mpi_exec_shell
2807	echo "export return_addres" >> mpi_exec_shell
2808	echo "export return_username" >> mpi_exec_shell
2809	echo "export tasks_per_node" >> mpi_exec_shell
2810	echo "export write_binary" >> mpi_exec_shell
2811	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2812	echo " " >> mpi_exec_shell
2813	echo "exec ./a.out" >> mpi_exec_shell
2814
2815	chmod u+x mpi_exec_shell
2816	export MPIPROGINF=YES
2817	mpirun -f multinode_config &
2818	wait
2819
2820	fi
2821	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2822	then
2823
2824	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2825	# DOES NOT EXIST
2826	if [[ $host != lcsgih && $host != lcsgib ]]
2827	then
2828	if [[ -f $hostfile ]]
2829	then
2830	cp $hostfile hostfile
2831	else
2832	(( ii = 1 ))
2833	while (( ii <= $numprocs / $threads_per_task ))
2834	do
2835	echo $localhost_realname >> hostfile
2836	(( ii = ii + 1 ))
2837	done
2838	fi
2839	eval zeile=\"`head -n $ii hostfile`\"
2840	printf "\n *** running on: $zeile"
2841	fi
2842
2843	(( ii = $numprocs / $threads_per_task ))
2844	export OMP_NUM_THREADS=$threads_per_task
2845	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2846	if [[ $threads_per_task != 1 ]]
2847	then
2848	printf "\n threads per task: $threads_per_task"
2849	fi
2850	if [[ $run_coupled_model = false ]]
2851	then
2852	printf "\n\n"
2853	if [[ $host = lcsgih \|\| $host = lcsgib ]]
2854	then
2855	# ulimit -s 300000 # A too large stack size causes problems
2856	# export MV2_NUM_PORTS=2
2857	# export MV2_CPU_MAPPING=0:1:2:3
2858	# mpiexec ./a.out $ROPTS
2859	mpiexec_mpt -np $ii ./a.out $ROPTS
2860	elif [[ $host = lcxt4 ]]
2861	then
2862	aprun -n $ii -N $tasks_per_node a.out $ROPTS
2863	else
2864	echo "no_coupling" > runfile_atmos
2865	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
2866	fi
2867	else
2868	(( iii = ii / 2 ))
2869	echo "atmosphere_to_ocean" > runfile_atmos
2870	echo "ocean_to_atmosphere" > runfile_ocean
2871
2872	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2873	printf "\n\n"
2874
2875	if [[ $host = lcsgih \|\| $host = lcsgib ]]
2876	then
2877
2878	mpiexec -n $iii a.out $ROPTS < runfile_atmos &
2879	mpiexec -n $iii a.out $ROPTS < runfile_ocean &
2880	# head -n $iii $PBS_NODEFILE > nodefile_atmos
2881	# echo "--- nodefile_atmos:"
2882	# cat nodefile_atmos
2883	# tail -n $iii $PBS_NODEFILE > nodefile_ocean
2884	# echo "--- nodefile_ocean:"
2885	# cat nodefile_ocean
2886	# export PBS_NODEFILE=${PWD}/nodefile_atmos
2887	# mpiexec_mpt -np $iii ./a.out $ROPTS < runfile_atmos &
2888	# export PBS_NODEFILE=${PWD}/nodefile_ocean
2889	# mpiexec_mpt -np $iii ./a.out $ROPTS < runfile_ocean &
2890
2891
2892	elif [[ $host = lcxt4 ]]
2893	then
2894	aprun -n $iii -N $tasks_per_node a.out < runfile_atmos $ROPTS &
2895	aprun -n $iii -N $tasks_per_node a.out < runfile_ocean $ROPTS &
2896	else
2897
2898	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
2899	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_atmos &
2900	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_ocean &
2901	# mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2902	# mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2903	fi
2904	wait
2905	fi
2906
2907	# if [[ $scirocco = true ]]
2908	# then
2909	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2910	# else
2911	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2912	# fi
2913
2914	elif [[ $host = decalpha ]]
2915	then
2916	dmpirun -np $numprocs a.out $ROPTS
2917	elif [[ $host = lctit ]]
2918	then
2919	export runfile=runfile.$kennung
2920
2921	echo "cd $PWD" > $runfile
2922	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2923	echo "export cpurest=$cpurest" >> $runfile
2924	echo "export fname=$fname" >> $runfile
2925	echo "export localhost=$localhost" >> $runfile
2926	echo "export return_addres=$return_addres" >> $runfile
2927	echo "export return_username=$return_username" >> $runfile
2928	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2929	echo "export write_binary=$write_binary" >> $runfile
2930	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2931	echo "./a.out" >> $runfile
2932	chmod u+x $runfile
2933
2934	if [[ "$QUEUE" = interactive ]]
2935	then
2936	mpirun -np $numprocs a.out $ROPTS
2937	else
2938	(( mem_tsubame = $memory / 1024.0 ))
2939	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
2940	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2941	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
2942	fi
2943
2944	rm $runfile
2945	else
2946	mpprun -n $numprocs a.out $ROPTS
2947	fi
2948	[[ $? != 0 ]] && execution_error=true
2949
2950
2951	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2952	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2953	then
2954	apprentice
2955	fi
2956	else
2957	a.out $ROPTS
2958	fi
2959	fi
2960	if [[ $? != 0 \|\| $execution_error = true ]]
2961	then
2962
2963	# ABBRUCH BEI LAUFZEITFEHLER
2964	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2965	printf "\n +++ runtime error occured"
2966	locat=execution
2967	exit
2968	else
2969	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2970	printf "\n$striche\n *** execution finished \n"
2971	fi
2972
2973
2974
2975	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2976	(( i = 0 ))
2977	while (( i < ioc ))
2978	do
2979	(( i = i + 1 ))
2980	if (( i == 1 ))
2981	then
2982	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2983	fi
2984	printf "\n >>> ${out_command[$i]}"
2985	eval ${out_command[$i]}
2986	if (( i == ioc ))
2987	then
2988	printf "\n$striche\n"
2989	fi
2990	done
2991
2992
2993	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2994	if [[ $do_trace = true ]]
2995	then
2996	printf "\n\n"
2997	ls -al
2998	fi
2999
3000
3001
3002	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
3003	(( i = 0 ))
3004	while (( i < iout ))
3005	do
3006	(( i = i + 1 ))
3007	if (( i == 1 ))
3008	then
3009	printf "\n\n *** saving OUTPUT-files:\n$striche"
3010	fi
3011
3012	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
3013	files_for_pes=false; filetyp=file
3014	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
3015	then
3016	files_for_pes=true; filetyp=directory
3017	actionout[$i]=""
3018	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
3019	then
3020	actionout[$i]=""
3021	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
3022	then
3023	files_for_pes=true; filetyp=directory
3024	actionout[$i]="ar"
3025	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
3026	then
3027	actionout[$i]="ar"
3028	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
3029	then
3030	files_for_pes=true; filetyp=directory
3031	actionout[$i]="fl"
3032	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
3033	then
3034	actionout[$i]="fl"
3035	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3036	then
3037	files_for_pes=true; filetyp=directory
3038	actionout[$i]="tr"
3039	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3040	then
3041	actionout[$i]="tr"
3042	fi
3043
3044	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3045	then
3046	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3047	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
3048	then
3049	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3050	else
3051
3052
3053	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3054	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3055	# REMOTE-RECHNUNGEN
3056	if [[ "${actionout[$i]}" = tr ]]
3057	then
3058	if [[ $localhost != $fromhost ]]
3059	then
3060	if [[ $files_for_pes = false ]]
3061	then
3062	cps=""
3063	cst=""
3064	else
3065	cps=-c
3066	cst="/"
3067	fi
3068	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3069	then
3070
3071	# TRANSFER IN EIGENSTAENDIGEM JOB
3072	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3073	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3074	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3075	if [[ $files_for_pes = false ]]
3076	then
3077	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3078	else
3079	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3080	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3081	fi
3082
3083	echo "set -x" > transfer_${localout[$i]}
3084	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3085
3086	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3087	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3088	printf "\n or higher cycle\n"
3089	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3090
3091	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3092
3093	if [[ $localhost = nech ]]
3094	then
3095	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3096	else
3097	if [[ "$LOGNAME" = b323013 ]]
3098	then
3099	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3100	else
3101	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3102	fi
3103	fi
3104
3105	else
3106
3107	# TRANSFER INNERHALB DIESES JOBS
3108	transfer_failed=false
3109	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3110	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3111	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3112	[[ $? != 0 ]] && transfer_failed=true
3113
3114	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3115	# LOKALER MASCHINE ANLEGEN
3116	if [[ $transfer_failed = true ]]
3117	then
3118	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3119	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3120
3121	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3122	# ANLEGEN.
3123	eval local_catalog=${pathout[$i]}
3124	if [[ ! -d $local_catalog ]]
3125	then
3126	printf " *** local directory does not exist. Trying to create:\n"
3127	printf " $local_catalog \n"
3128	mkdir -p $local_catalog
3129	fi
3130	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3131	transfer_problems=true
3132	fi
3133	fi
3134	else
3135
3136	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3137	actionout[$i]=""
3138	fi
3139	fi
3140
3141
3142	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3143	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3144	# REMOTE-RECHNUNGEN
3145	if [[ "${actionout[$i]}" = tra ]]
3146	then
3147	if [[ $localhost != $fromhost ]]
3148	then
3149	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3150	then
3151
3152	# TRANSFER IN EIGENSTAENDIGEM JOB
3153	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3154	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3155	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3156	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3157
3158	echo "set -x" > transfer_${localout[$i]}
3159	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3160
3161	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3162	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3163	printf "\n or higher cycle\n"
3164	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3165
3166	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3167
3168	if [[ $localhost = nech ]]
3169	then
3170	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3171	else
3172	if [[ $LOGNAME = b323013 ]]
3173	then
3174	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3175	else
3176	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3177	fi
3178	fi
3179
3180	else
3181
3182	# TRANSFER INNERHALB DIESES JOBS
3183	transfer_failed=false
3184	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3185	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3186	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3187	[[ $? != 0 ]] && transfer_failed=true
3188
3189	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3190	# LOKALER MASCHINE ANLEGEN
3191	if [[ $transfer_failed = true ]]
3192	then
3193	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3194	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3195
3196	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3197	# ANLEGEN
3198	eval local_catalog=${pathout[$i]}
3199	if [[ ! -d $local_catalog ]]
3200	then
3201	printf " *** local directory does not exist. Trying to create:\n"
3202	printf " $local_catalog \n"
3203	mkdir -p $local_catalog
3204	fi
3205
3206	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3207	transfer_problems=true
3208	fi
3209	fi
3210	else
3211
3212	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3213	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3214	actionout[$i]=a
3215	fi
3216	fi
3217
3218
3219	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3220	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3221	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3222	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3223	if [[ "${actionout[$i]}" = fl ]]
3224	then
3225	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3226	chmod g+rx $tmp_data_catalog
3227	if [[ $files_for_pes = false ]]
3228	then
3229	printf "\n >>> OUTPUT: ${localout[$i]} to"
3230	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3231	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3232	else
3233	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3234	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3235	mkdir $tmp_data_catalog/${frelout[$i]}
3236	cd ${localout[$i]}
3237	for file in $(ls *)
3238	do
3239	ln -f $file $tmp_data_catalog/${frelout[$i]}
3240	done
3241	cd $TEMPDIR
3242	fi
3243
3244
3245	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3246	if [[ $store_on_archive_system = true ]]
3247	then
3248
3249	if [[ $archive_system = asterix ]]
3250	then
3251	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3252	if [[ $files_for_pes = false ]]
3253	then
3254	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3255	else
3256	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3257	fi
3258	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3259	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3260	echo "then" >> archive_${frelout[$i]}
3261	echo " do_stageout=false" >> archive_${frelout[$i]}
3262	echo "else" >> archive_${frelout[$i]}
3263	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3264	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3265	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3266	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3267	if [[ $files_for_pes = false ]]
3268	then
3269	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3270	else
3271	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3272	fi
3273	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3274	echo "fi" >> archive_${frelout[$i]}
3275	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3276	elif [[ $archive_system = DMF ]]
3277	then
3278	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3279	if [[ $files_for_pes = false ]]
3280	then
3281	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3282	locat=DMF
3283	exit
3284	else
3285	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3286	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3287	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3288	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3289	fi
3290	elif [[ $archive_system = tivoli ]]
3291	then
3292	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3293	if [[ $files_for_pes = false ]]
3294	then
3295	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3296	echo "set -x" >> archive_${frelout[$i]}
3297	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3298	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3299	else
3300
3301	echo "set -x" >> archive_${frelout[$i]}
3302	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3303	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3304	cd $tmp_data_catalog
3305	all_files=`ls -1 ${frelout[$i]}/*`
3306	cd - > /dev/null
3307	(( inode = 0 ))
3308	(( tp1 = tasks_per_node + 1 ))
3309	while (( inode < nodes ))
3310	do
3311	# echo "*** all_files = \"$all_files\" "
3312	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3313	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3314	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3315	# echo "*** files = \"$files\" "
3316	# echo "*** all_files = \"$all_files\" "
3317	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3318	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3319	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3320	(( inode = inode + 1 ))
3321	done
3322	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3323	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3324	fi
3325	elif [[ $archive_system = ut ]]
3326	then
3327	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3328	if [[ $files_for_pes = false ]]
3329	then
3330	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3331	echo "set -x" >> archive_${frelout[$i]}
3332	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3333	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3334	else
3335
3336	echo "set -x" >> archive_${frelout[$i]}
3337	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3338	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3339	cd $tmp_data_catalog
3340	all_files=`ls -1 ${frelout[$i]}/*`
3341	cd - > /dev/null
3342	(( inode = 0 ))
3343	(( tp1 = tasks_per_node + 1 ))
3344	while (( inode < nodes ))
3345	do
3346	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3347	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3348	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3349	(( inode = inode + 1 ))
3350	done
3351	fi
3352	elif [[ $archive_system = none ]]
3353	then
3354	printf " +++ archiving on $localhost not available!\n"
3355	fi
3356
3357	if [[ $archive_system != none ]]
3358	then
3359	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3360	then
3361	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3362	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3363	elif [[ $localhost = nech ]]
3364	then
3365	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3366	fi
3367	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3368	fi
3369	else
3370	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3371	fi
3372
3373
3374	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3375	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3376	if [[ $files_for_pes = false ]]
3377	then
3378	cat /dev/null > ${pathout[$i]}
3379	else
3380	mkdir -p ${pathout[$i]}
3381	fi
3382
3383	fi
3384
3385
3386	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3387	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3388	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3389	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3390	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3391	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3392	if [[ "${actionout[$i]}" = ar ]]
3393	then
3394	if [[ $files_for_pes = false ]]
3395	then
3396	printf "\n >>> OUTPUT: ${localout[$i]} to"
3397	printf "\n ${pathout[$i]}"
3398	printf "\n File will be copied to archive-system ($archive_system) !\n"
3399	else
3400	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3401	printf "\n ${pathout[$i]}"
3402	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3403	fi
3404	mv ${localout[$i]} ${frelout[$i]}
3405
3406	file_saved=false
3407
3408	if [[ $archive_system = asterix ]]
3409	then
3410	do_stageout=true
3411	(( stageout_anz = 0 ))
3412	while [[ $do_stageout = true ]]
3413	do
3414	if [[ $files_for_pes = false ]]
3415	then
3416	stageout ${frelout[$i]} > STAGE_OUTPUT
3417	else
3418	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3419	fi
3420	cat STAGE_OUTPUT
3421	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3422	then
3423	file_saved=true
3424	do_stageout=false
3425	else
3426	if [[ $files_for_pes = false ]]
3427	then
3428	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3429	else
3430	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3431	fi
3432	(( stageout_anz = stageout_anz + 1 ))
3433	if (( stageout_anz == 10 ))
3434	then
3435	printf "\n +++ stoped after 10 unsuccessful tries!"
3436	archive_save=false
3437	do_stageout=false
3438	else
3439	printf "\n *** new try to store on archive after 15 min:"
3440	sleep 900
3441	fi
3442	fi
3443	done
3444	elif [[ $archive_system = DMF ]]
3445	then
3446	if [[ $files_for_pes = false ]]
3447	then
3448	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3449	locat=DMF
3450	exit
3451	else
3452	rm -rf $ARCHIVE/${frelout[$i]}
3453	cp -r ${frelout[$i]} $ARCHIVE
3454	fi
3455	file_saved=true
3456	elif [[ $archive_system = tivoli ]]
3457	then
3458	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3459	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3460	# GELEGT WERDEN
3461	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3462	chmod g+rx $tmp_data_catalog
3463	if [[ $files_for_pes = false ]]
3464	then
3465	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3466	else
3467	mkdir $tmp_data_catalog/${frelout[$i]}
3468	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3469	fi
3470
3471	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3472	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3473	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3474	if [[ $files_for_pes = false ]]
3475	then
3476	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3477	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3478	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3479	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3480	else
3481	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3482	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3483	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3484	fi
3485
3486	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3487	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3488	file_saved=true
3489
3490	elif [[ $archive_system = ut ]]
3491	then
3492	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3493	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3494	# GELEGT WERDEN
3495	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3496	chmod g+rx $tmp_data_catalog
3497	if [[ $files_for_pes = false ]]
3498	then
3499	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3500	else
3501	mkdir $tmp_data_catalog/${frelout[$i]}
3502	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3503	fi
3504
3505	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3506	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3507	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3508	if [[ $files_for_pes = false ]]
3509	then
3510	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3511	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3512	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3513	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3514	else
3515	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3516	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3517	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3518	fi
3519
3520	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3521	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3522	file_saved=true
3523
3524	else
3525	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3526	archive_save=false
3527	fi
3528	if [[ $file_saved = true ]]
3529	then
3530	if [[ $files_for_pes = false ]]
3531	then
3532	cat /dev/null > ${pathout[$i]}
3533	else
3534	mkdir -p ${pathout[$i]}
3535	fi
3536	fi
3537	fi
3538
3539	# APPEND AUF LOKALER MASCHINE
3540	if [[ "${actionout[$i]}" = "a" ]]
3541	then
3542	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3543	cat ${localout[$i]} >> ${pathout[$i]}
3544	fi
3545
3546	# KOPIEREN AUF LOKALER MASCHINE
3547	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3548	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3549	then
3550
3551	# KOPIEREN AUF EINPROZESSORMASCHINE
3552	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3553	then
3554	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3555	if [[ $link_local_output = true ]]
3556	then
3557	printf " using ln -f\n"
3558	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3559	fi
3560	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3561	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3562	then
3563	if [[ $link_local_output = true ]]
3564	then
3565	printf " ln failed, using cp...\n"
3566	fi
3567	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3568	fi
3569	else
3570	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3571	if [[ $link_local_output = true ]]
3572	then
3573	printf " using ln -f\n"
3574	ln -f ${localout[$i]} ${pathout[$i]}
3575	fi
3576	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3577	if [[ ! -f "${pathout[$i]}" ]]
3578	then
3579	if [[ $link_local_output = true ]]
3580	then
3581	printf " ln failed, using cp...\n"
3582	fi
3583	cp ${localout[$i]} ${pathout[$i]}
3584	fi
3585	fi
3586
3587	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3588	then
3589
3590	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3591	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3592	# WIRD DANN KOPIERT
3593	# PER MOVE UMBENANNT WERDEN
3594	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3595	if [[ $link_local_output = true ]]
3596	then
3597	printf " using ln -f\n"
3598	mkdir ${pathout[$i]}
3599	cd ${localout[$i]}
3600	for file in $(ls *)
3601	do
3602	ln -f $file ${pathout[$i]}
3603	done
3604	cd $TEMPDIR
3605	fi
3606	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
3607	if [[ ! -f "${pathout[$i]}/_0000" ]]
3608	then
3609	if [[ $link_local_output = true ]]
3610	then
3611	printf " ln failed for .../_0000, using cp...\n"
3612	fi
3613	cp -r ${localout[$i]} ${pathout[$i]}
3614	fi
3615
3616	fi
3617	fi
3618	done
3619	if (( i != 0 ))
3620	then
3621	if [[ $transfer_problems = true ]]
3622	then
3623	printf "\n$striche\n *** OUTPUT-files saved"
3624	printf "\n +++ WARNING: some data transfers failed! \n"
3625	else
3626	printf "\n$striche\n *** all OUTPUT-files saved \n"
3627	fi
3628	fi
3629
3630
3631	# EVENTUELL FOLGEJOB STARTEN
3632	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3633	if [[ -f CONTINUE_RUN ]]
3634	then
3635
3636	if [[ $archive_save = true ]]
3637	then
3638
3639	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3640	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3641	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3642	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3643	# HANDEN
3644	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3645	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3646	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3647	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3648	then
3649	mc=`echo $mc \| sed 's/#/f/g'`
3650	fi
3651
3652
3653	# JOB STARTEN
3654	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3655	echo " $mc"
3656	printf "\n$striche\n"
3657	if [[ $localhost != $fromhost ]]
3658	then
3659
3660	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3661	then
3662	echo "*** ssh will be used to initiate restart-runs!"
3663	echo " return_addres=\"$return_addres\" "
3664	echo " return_username=\"$return_username\" "
3665	if [[ $return_addres = 172.20.25.41 ]]
3666	then
3667	# WORKAROUND AUF SCIROCCO AM TIT
3668	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3669	else
3670	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3671	fi
3672	else
3673	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3674	locat=restart; exit
3675	fi
3676
3677	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3678	# DER AKTUELLE JOB ENDET
3679	sleep 30
3680
3681	else
3682
3683	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3684	# RUFEN WERDEN, AUSSER AUF lcfimm
3685	cd $LOCAL_PWD
3686	if [[ $localhost = lcfimm ]]
3687	then
3688	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3689	else
3690	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3691	fi
3692	cd - > /dev/null
3693	fi
3694	printf "\n$striche\n *** restart-run initiated \n"
3695
3696
3697	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3698	# GEHOLT WORDEN SIND, LOESCHEN
3699	(( i = 0 ))
3700	while (( i < iin ))
3701	do
3702	(( i = i + 1 ))
3703	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3704	then
3705	rm -r $tmp_data_catalog/${frelin[$i]}
3706	fi
3707	done
3708
3709	else
3710
3711	printf "\n +++ no restart-run possible, since errors occured"
3712	printf "\n during the archive process"
3713	fi
3714
3715	fi
3716
3717
3718
3719	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3720	if [[ "$email_notification" != "" ]]
3721	then
3722
3723	if [[ $localhost != $fromhost ]]
3724	then
3725	if [[ -f CONTINUE_RUN ]]
3726	then
3727	echo "PALM restart run necessary" > email_text
3728	echo "description header of actual run:" >> email_text
3729	cat CONTINUE_RUN >> email_text
3730	echo "mrun-command to restart:" >> email_text
3731	echo "$mc" >> email_text
3732	else
3733	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3734	fi
3735	mail $email_notification < email_text
3736	printf "\n *** email notification sent to \"$email_notification\" "
3737	fi
3738	fi
3739
3740
3741
3742	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3743	cd $HOME
3744	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3745
3746	else
3747
3748
3749	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3750	# CHENDE AKTIONEN DURCHGEFUEHRT
3751
3752	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3753	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3754	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3755	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3756	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
3757	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3758	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3759	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3760	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3761	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3762	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3763	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3764	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3765	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3766	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3767	if [[ $use_openmp = true ]]
3768	then
3769	mrun_com=${mrun_com}" -O"
3770	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3771	else
3772	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3773	fi
3774	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3775	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3776	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3777	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3778	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
3779	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3780	if [[ $do_remote = true ]]
3781	then
3782	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3783	fi
3784
3785
3786	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3787	jobfile=jobfile.$RANDOM
3788
3789
3790	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3791	echo "mkdir $TEMPDIR" >> $jobfile
3792	echo "cd $TEMPDIR" >> $jobfile
3793
3794
3795	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3796	if [[ $do_trace = true ]]
3797	then
3798	echo "set -x" >> $jobfile
3799	else
3800	echo "set +vx" >> $jobfile
3801	fi
3802
3803
3804	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
3805	# DATEI FUER DEN JOB
3806	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
3807	then
3808
3809	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
3810	# KOPIEREN
3811	if [[ $restart_run != true ]]
3812	then
3813	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
3814	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
3815	fi
3816
3817	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
3818	echo "set -x" >> $jobfile
3819	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
3820	echo "export SOURCES_COMPLETE=true" >> $jobfile
3821
3822	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
3823	# ARBEITSVERZEICHNIS VERSCHIEBEN
3824	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
3825	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
3826	echo "execute_mrun=true" >> $jobfile
3827	echo " " >> $jobfile
3828
3829	else
3830
3831	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3832	# SOWIE GEGEBENENFALLS DES MAKEFILES
3833	if [[ $do_compile = true ]]
3834	then
3835
3836	source_catalog=SOURCES_FOR_RUN_$fname
3837
3838	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3839	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3840	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3841	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3842	echo "export SOURCES_COMPLETE=true" >> $jobfile
3843	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3844
3845	for filename in $source_list
3846	do
3847	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3848	echo "cat > $filename << \"%END%\"" >> $jobfile
3849	cat $source_catalog/$filename >> $jobfile
3850	echo " " >> $jobfile
3851	echo "%END%" >> $jobfile
3852	echo " " >> $jobfile
3853	done
3854
3855	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3856	echo "cat > Makefile << \"%END%\"" >> $jobfile
3857	cat $source_catalog/Makefile >> $jobfile
3858	echo " " >> $jobfile
3859	echo "%END%" >> $jobfile
3860	echo " " >> $jobfile
3861
3862	echo "cd - > /dev/null" >> $jobfile
3863
3864	fi
3865
3866
3867	# ABSPEICHERN DER KONFIGURATIONSDATEI
3868	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3869	echo "cat > $config_file << \"%END%\"" >> $jobfile
3870	cat $config_file >> $jobfile
3871	echo "%END%" >> $jobfile
3872	echo " " >> $jobfile
3873
3874
3875	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3876	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3877	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3878	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3879	echo "%END%" >> $jobfile
3880	if [[ $host = lctit ]]
3881	then
3882	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3883	echo "mv mrun_new $mrun_script_name" >> $jobfile
3884	fi
3885	echo "chmod u+x $mrun_script_name" >> $jobfile
3886	echo "execute_mrun=true" >> $jobfile
3887	echo " " >> $jobfile
3888
3889	fi
3890
3891
3892	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3893	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3894	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3895	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3896	if [[ $do_remote = true ]]
3897	then
3898	(( i = 0 ))
3899	while (( i < iin ))
3900	do
3901	(( i = i + 1 ))
3902	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3903	if [[ "${transin[$i]}" = job ]]
3904	then
3905	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3906	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3907	echo " " >> $jobfile
3908	echo "%END%" >> $jobfile
3909	else
3910	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3911	fi
3912
3913	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3914	echo "if [[ \$? = 1 ]]" >> $jobfile
3915	echo "then" >> $jobfile
3916	echo " echo \" \" " >> $jobfile
3917	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3918	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3919	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3920	echo " execute_mrun=false" >> $jobfile
3921	echo "fi" >> $jobfile
3922	done
3923	fi
3924
3925	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3926	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3927	echo "LOCAL_PWD=$working_directory" >> $jobfile
3928	echo "export LOCAL_PWD" >> $jobfile
3929
3930	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3931	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3932	echo "export LOCAL_MRUN_PATH" >> $jobfile
3933
3934	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3935	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3936	then
3937	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3938	fi
3939
3940	# MRUN AUF ZIELRECHNER AUFRUFEN
3941	echo "set -x" >> $jobfile
3942	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3943
3944	echo 'ls -al; echo `pwd`' >> $jobfile
3945	echo "cd \$HOME" >> $jobfile
3946	echo "rm -rf $TEMPDIR" >> $jobfile
3947
3948
3949
3950
3951	# JOB PER SUBJOB STARTEN
3952	if [[ $silent = false ]]
3953	then
3954	printf "\n "
3955	else
3956	printf "\n\n"
3957	fi
3958
3959	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
3960	rm -rf $jobfile
3961
3962
3963	fi # ENDE REMOTE-TEIL
3964
3965
3966
3967	# ENDE DER PROZEDUR

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

| Impressum | ©Leibniz Universität Hannover |