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source: palm/trunk/SCRIPTS/mrun @ 179

Last change on this file since 179 was 179, checked in by raasch, 16 years ago
preliminary adjustments for HLRN-2 system
Property svn:keywords set to `Id`
File size: 143.8 KB

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1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 179 2008-07-16 11:47:48Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
143	# which allows the user to choose his own job catalog
144	# by setting job_catalog in the configuration file
145	# (default is ~/job_queue),
146	# workaround for mpiexec with -env option,
147	# adjustments for lcxt4 (Bergen Center for Computational
148	# Science)
149	# 14/07/08 - Siggi - adjustments for lcsgih
150
151	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
152
153	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
154	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
155	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
156
157	AddFilenames=""
158	additional_conditions=""
159	add_source_path=""
160	afname=""
161	archive_save=true
162	archive_system=none
163	compiler_name=""
164	cond1=""
165	cond2=""
166	config_file=.mrun.config
167	cpp_opts=""
168	cpp_options=""
169	cpumax=0
170	cpurest=0
171	delete_temporary_catalog=true
172	do_batch=false
173	do_compile=true
174	do_remote=false
175	do_stagein=true
176	do_stageout=true
177	do_trace=false
178	email_notification=""
179	exclude=""
180	executable=""
181	execution_error=false
182	fimm=false
183	fname=test
184	fromhost=""
185	global_revision=""
186	group_number=none
187	host=""
188	host_file=""
189	hp=""
190	ignore_archive_error=false
191	input_list=""
192	interpreted_config_file=""
193	job_catalog="~/job_queue"
194	job_on_file=""
195	keep_data_from_previous_run=false
196	link_local_output=false
197	localhost_realname=$(hostname)
198	local_compile=false
199	locat=normal
200	mainprog=""
201	makefile=""
202	mc=$0
203	while [[ $(echo $mc \| grep -c "/") != 0 ]]
204	do
205	mc=`echo $mc \| cut -f2- -d"/"`
206	done
207	module_files=""
208	mrun_script_name=$mc
209	netcdf_inc=""
210	netcdf_lib=""
211	netcdf_support=false
212	node_usage=default
213	numprocs=""
214	OOPT=""
215	openmp=false
216	output_list=""
217	package_list=""
218	punkte="..........................................................."
219	queue=none
220	read_from_config=""
221	restart_run=false
222	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
223	if [[ $return_addres = 130.75.105.158 ]]
224	then
225	return_addres=172.20.25.41
226	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
227	fi
228	# if [[ $return_addres = 210.117.65.1 ]]
229	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
230	# then
231	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
232	# fi
233	return_password=""
234	return_username=$LOGNAME
235	remotecall=false
236	remote_username=""
237	run_coupled_model=false
238	run_mode=""
239	scirocco=false
240	store_on_archive_system=true
241	striche=" ----------------------------------------------------------------------------"
242	silent=false
243	source_list=""
244	source_path=SOURCE
245	tasks_per_node=""
246	threads_per_task=1
247	tmpcreate=false
248	tmp_data_catalog=""
249	transfer_problems=false
250	usern=$LOGNAME
251	working_directory=`pwd`
252	TOPT=""
253	XOPT=""
254	zeit=$( date \| cut -c 12-19 )
255
256	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
257	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
258
259	typeset -R30 calltime
260	typeset -L20 spalte1
261	typeset -L40 spalte2
262	typeset -L60 spalte3
263	typeset -L35 string1=`date`
264	typeset -L12 string2=$usern
265	typeset -L12 string3=$localhost_realname
266	typeset -L12 string4
267	typeset -L12 string5
268	typeset -L30 version="MRUN 2.0 Rev$Rev: 164 $"
269
270
271
272	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
273	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
274
275	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
276	# EXPORTIERT WERDEN
277	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
278	export group_number input_list memory numprocs output_list queue run_mode
279
280
281
282	# FEHLERBEHANDLUNG
283	# BEI EXIT:
284	trap 'rm -rf $working_directory/tmp_mrun
285	if [[ $locat != localhost ]]
286	then
287	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
288	# then
289	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
290	#MRUN-calls on $localhost
291	#
292	#date and time user localhost remotehost termination mrun-command
293	#--------------------------------------------------------------------------------------------------------------------
294	#%STATEND%
295	# chmod 666 ${mrun_path}/statistik/mrun_statistik
296	# fi
297	#
298	# # EINTRAG IN DIE STATISTIK-DATEI
299	# string4=$host
300	# string5=$locat
301	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
302	# then
303	# if [[ $do_batch = true ]]
304	# then
305	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
306	# else
307	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
308	# fi
309	# fi
310	echo " " > /dev/null
311	fi
312
313	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
314	then
315
316	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
317	(( i = 0 ))
318	while (( i < iec ))
319	do
320	(( i = i + 1 ))
321	printf "\n *** Execution of ERROR-command:\n"
322	printf " >>> ${err_command[$i]}\n"
323	eval ${err_command[$i]}
324	done
325	if [[ -n $interpreted_config_file ]] then
326	rm -rf $interpreted_config_file
327	fi
328	if [[ -n .mrun_environment ]] then
329	rm -rf .mrun_environment
330	fi
331	if [[ $tmpcreate = true ]]
332	then
333	printf "\n *** Contents of \"$TEMPDIR\":\n"
334	ls -al; cd
335	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
336	fi
337	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
338	then
339	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
340	fi
341	printf "\n\n+++ MRUN killed \n\n"
342	elif [[ $locat != control_c ]]
343	then
344	printf "\n\n --> all actions finished\n\n"
345	printf " Bye, bye $usern !!\n\n"
346	fi' exit
347
348
349	# BEI TERMINAL-BREAK:
350	trap 'rm -rf $working_directory/tmp_mrun
351	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
352	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
353	then
354	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
355	fi
356	printf "\n+++ MRUN killed by \"^C\" \n\n"
357	locat=control_c
358	exit
359	' 2
360
361
362	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
363	# BEEN SET
364	if [[ "$PALM_BIN" = "" ]]
365	then
366	printf "\n +++ environment variable PALM_BIN has not been set"
367	printf "\n please set it to the directory where the PALM scripts are located"
368	locat=palm_bin; exit
369	fi
370
371
372
373	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
374	# FUER FOLGEJOBS BENOETIGT WIRD
375	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
376	do
377	case $option in
378	(a) afname=$OPTARG;;
379	(A) store_on_archive_system=false; mc="$mc -A";;
380	(b) do_batch=true; mc="$mc -b";;
381	(B) delete_temporary_catalog=false; mc="$mc -B";;
382	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
383	(C) restart_run=true; mc="$mc -C";;
384	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
385	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
386	(F) job_on_file="-D"; mc="$mc -F";;
387	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
388	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
389	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
390	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
391	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
392	(I) ignore_archive_error=true; mc="$mc -I";;
393	(k) keep_data_from_previous_run=true; mc="$mc -k";;
394	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
395	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
396	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
397	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
398	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
399	(O) use_openmp=true; mc="$mc -O";;
400	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
401	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
402	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
403	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
404	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
405	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
406	(S) read_from_config=false; mc="$mc -S";;
407	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
408	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
409	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
410	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
411	(v) silent=true; mc="$mc -v";;
412	(x) do_trace=true;set -x; mc="$mc -x";;
413	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
414	(Y) run_coupled_model=true; mc="$mc -Y";;
415	(\?) printf "\n +++ unknown option $OPTARG \n"
416	printf "\n --> type \"$0 ?\" for available options \n"
417	locat=parameter;exit;;
418	esac
419	done
420
421
422	# EVTL. POSITIONSPARAMETER EINLESEN
423	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
424	shift OPTIND-1
425
426
427	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
428	if [[ "$1" = "?" ]]
429	then
430	(printf "\n *** mrun can be called as follows:\n"
431	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
432	printf "\n Description of available options:\n"
433	printf "\n Option Description Default-Value"
434	printf "\n -a base name of input files equiv. -d"
435	printf "\n -A no archiving when using file-attribute fl"
436	printf "\n -b batch-job on local machine ---"
437	printf "\n -B do not delete temporary directory at end ---"
438	printf "\n -c configuration file .mrun.config"
439	printf "\n -d base name of files attached to program test"
440	printf "\n -D preprocessor(cpp)-directives \"\" "
441	printf "\n -F create remote job file only ---"
442	printf "\n -h execution host $localhost_realname"
443	printf "\n -i INPUT control list \"\" "
444	printf "\n -I archiving errors of previous batch-jobs"
445	printf "\n will be ignored"
446	printf "\n -k keep data from previous run"
447	printf "\n -K additional conditions for controling"
448	printf "\n usage of conditional code and"
449	printf "\n env-variables in configuration file \"\" "
450	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
451	printf "\n -M Makefile name Makefile"
452	printf "\n -n node usage (shared/not_shared) depending on -h"
453	printf "\n -o OUTPUT control list \"\" "
454	printf "\n -O use OpenMP ---"
455	printf "\n -p software package list \"\" "
456	printf "\n -q queue \"$queue\" "
457	printf "\n -r run control list (combines -i -o) \"\" "
458	printf "\n -s filenames of routines to be compiled \"\" "
459	printf "\n must end with .f, .f90, .F, or .c !"
460	printf "\n use \"..\" for more than one file and wildcards"
461	printf "\n -s TEST compiles all files with w-permit"
462	printf "\n -S config file interpreted by shellscript ---"
463	printf "\n -t allowed cpu-time in seconds (batch) 0"
464	printf "\n -T tasks per node depending on -h"
465	printf "\n -u username on remote machine \"\" "
466	printf "\n -v no prompt for confirmation ---"
467	printf "\n -x tracing of mrun for debug purposes ---"
468	printf "\n -X # of processors (on parallel machines) 1"
469	printf "\n -Y run coupled model ---"
470	printf "\n "
471	printf "\n Possible values of positional parameter <modus>:"
472	printf "\n \"?\" - this outline \n\n") \| more
473	exit
474	elif [[ "$1" != "" ]]
475	then
476	printf "\n +++ positional parameter $1 unknown \n"
477	locat=parameter; exit
478	fi
479
480
481
482	# KURZE STARTMELDUNG
483	printf "\n*** $version "
484	printf "\n will be executed. Please wait ..."
485
486
487
488	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
489	if [[ ! -f $config_file ]]
490	then
491	printf "\n\n +++ configuration file: "
492	printf "\n $config_file"
493	printf "\n does not exist"
494	locat=connect; exit
495	fi
496
497
498	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
499	line=""
500	grep "%host_identifier" $config_file > tmp_mrun
501	while read line
502	do
503	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
504	then
505	HOSTNAME=`echo $line \| cut -d" " -s -f2`
506	host_identifier=`echo $line \| cut -d" " -s -f3`
507	if [[ $localhost_realname = $HOSTNAME ]]
508	then
509	localhost=$host_identifier
510	break
511	fi
512	fi
513	done < tmp_mrun
514
515	if [[ "$localhost" = "" ]]
516	then
517	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
518	printf "\n for local host \"$localhost_realname\"."
519	printf "\n Please add line"
520	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
521	printf "\n to the configuration file."
522	locat=localhost; exit
523	fi
524
525
526
527	# HOSTSPEZIFISCHE VARIABLEN SETZEN
528	case $localhost_realname in
529	(breg-en0\|berni-en0) archive_system=tivoli;;
530	(cs*) archive_system=ut;;
531	(fimm.bccs.uib.no) fimm=true;;
532	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
533	(hreg-en0\|hanni-en0) archive_system=tivoli;;
534	(scirocco) scirocco=true;;
535	esac
536
537
538
539	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
540	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
541	[[ "$afname" = "" ]] && afname=$fname
542
543
544	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
545	if [[ "$run_mode" != "" ]]
546	then
547	input_list="$input_list $run_mode"
548	output_list="$output_list $run_mode"
549	fi
550
551
552	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
553	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
554	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
555	# STARTET)
556	if [[ "$fromhost" = "" ]]
557	then
558	fromhost=$localhost
559	fi
560
561
562	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
563	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
564	then
565	source_list=TEST
566	local_compile=true
567	host=$localhost
568	fi
569
570
571	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
572	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
573	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
574	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
575	if [[ -n $host && "$host" != $localhost ]]
576	then
577	do_batch=true
578	do_remote=true
579	case $host in
580	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
581	(*) printf "\n"
582	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
583	printf "\n is not available"
584	locat=nqs; (( iec = 0 )); exit;;
585	esac
586	else
587	host=$localhost
588	fi
589
590
591	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
592	if [[ -n $additional_conditions ]]
593	then
594	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
595	cond1=`echo $additional_conditions \| cut -d" " -f1`
596	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
597	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
598	if [[ -n $dummy ]]
599	then
600	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
601	locat=options; exit
602	fi
603	fi
604
605
606	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
607	# ARCHIVIERUNG FEHLGESCHLAGEN IST
608	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
609	then
610	if [[ $ignore_archive_error = false ]]
611	then
612	printf "\n +++ data archiving of previous run failed"
613	printf "\n see directory \~/job_queue on remote machine"
614	locat=archive; exit
615	else
616	printf "\n +++ warning: data archiving in a previous run failed"
617	printf "\n MRUN continues, trying to get backup copy"
618	fi
619	fi
620
621
622
623	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
624	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
625	if [[ "$read_from_config" = false ]]
626	then
627
628	[[ $silent = false ]] && printf "\n Reading the configuration file... "
629	while read zeile
630	do
631	[[ $silent = false ]] && printf "."
632
633
634	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
635	# ERSETZEN
636	eval zeile=\"$zeile\"
637
638
639	# INTERPRETATION DER ZEILE
640	if [[ "$(echo $zeile)" = "" ]]
641	then
642	# LEERZEILE, KEINE AKTION
643	continue
644
645	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
646	then
647
648	# ZEILE IST KOMMENTARZEILE
649	true
650
651	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
652	then
653
654	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
655	zeile=$(echo $zeile \| cut -c2-)
656	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
657	var=`echo $zeile \| cut -d" " -f1`
658	value=`echo $zeile \| cut -d" " -s -f2`
659	for_host=`echo $zeile \| cut -d" " -s -f3`
660	for_cond1=`echo $zeile \| cut -d" " -s -f4`
661	for_cond2=`echo $zeile \| cut -d" " -s -f5`
662
663	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
664	then
665
666	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
667	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
668	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
669
670
671	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
672	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
673	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
674	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
675	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
676	# KONFIGURATIONSDATEI
677	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
678	then
679	eval $var=\$value
680
681	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
682	if [[ $do_trace = true ]]
683	then
684	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
685	fi
686	fi
687
688	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
689	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
690	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
691	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
692	if [[ $var = host ]]
693	then
694	if [[ -n $host && "$host" != $localhost ]]
695	then
696	do_batch=true
697	do_remote=true
698	case $host in
699	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
700	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
701	printf "\n is not available"
702	locat=nqs; exit;;
703	esac
704	else
705	host=$localhost
706	fi
707	fi
708
709	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
710	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
711	# DEN PROGRAMMEN BENOETIGT WERDEN
712	export $var
713	fi
714
715
716
717
718	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
719	then
720
721	# ZEILE DEFINIERT ERROR-KOMMANDO
722	(( iec = iec + 1 ))
723	zeile=$(echo $zeile \| cut -c4-)
724	err_command[$iec]="$zeile"
725
726	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
727	then
728
729	# ZEILE DEFINIERT INPUT-KOMMANDO
730	(( iic = iic + 1 ))
731	zeile=$(echo $zeile \| cut -c4-)
732	in_command[$iic]="$zeile"
733
734	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
735	then
736
737	# ZEILE DEFINIERT OUTPUT-KOMMANDO
738	(( ioc = ioc + 1 ))
739	zeile=$(echo $zeile \| cut -c4-)
740	out_command[$ioc]="$zeile"
741
742	else
743
744	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
745	# s2a: in/out - Feld
746	# s2b: loc - Feld (optional)
747	# s2c: tr/ar - Feld (optional)
748	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
749	s1=`echo $zeile \| cut -d" " -f1`
750	s2=`echo $zeile \| cut -d" " -s -f2`
751	s2a=$(echo $s2 \| cut -d":" -f1)
752	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
753	then
754	s2b=""
755	s2c=""
756	else
757	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
758	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
759	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
760	fi
761	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
762	s3=`echo $zeile \| cut -d" " -f3`
763	s4=`echo $zeile \| cut -d" " -s -f4`
764	s5=`echo $zeile \| cut -d" " -s -f5`
765	s6=`echo $zeile \| cut -d" " -s -f6`
766
767
768	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
769	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
770	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
771	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
772	# HANDEN SEIN MUSS (D.H. s2b = loc)
773	IFSALT="$IFS"; IFS="$IFS:"
774	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
775	then
776	found=false
777	for actual in $input_list
778	do
779	for formal in $s3
780	do
781	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
782	done
783	done
784	if [[ $found = true ]]
785	then
786	(( iin = iin + 1 ))
787	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
788	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
789	extin[$iin]=$s6
790	fi
791	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
792	then
793	found=false
794	for actual in $output_list
795	do
796	for formal in $s3
797	do
798	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
799	done
800	done
801	if [[ $found = true ]]
802	then
803	(( iout = iout + 1 ))
804	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
805	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
806	fi
807	elif [[ "$s2a" != in && "$s2a" != out ]]
808	then
809	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
810	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
811	locat=connect; exit
812	fi
813	IFS="$IFSALT"
814	fi
815	done < $config_file
816
817	else
818
819
820	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
821	[[ $silent = false ]] && printf "..."
822	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
823	export interpreted_config_file=.icf.$RANDOM
824
825
826
827	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
828	# VERFUEGUNG STELLEN
829	cat > .mrun_environment << %%END%%
830	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
831	config_file = '$config_file', do_remote = '$do_remote',
832	do_trace = '$do_trace', host = '$host',
833	input_list = '$input_list', icf = '$interpreted_config_file',
834	localhost = '$localhost', output_list = '$output_list' /
835
836	%%END%%
837
838	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
839	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
840	mrun_memory=$memory
841	mrun_group_number=$group_number
842	mrun_cpumax=$cpumax
843	mrun_numprocs=$numprocs
844
845	if [[ $localhost_realname = "gate" ]]
846	then
847	interpret_config_gate.x
848	else
849	interpret_config.x
850	fi
851	rm .mrun_environment
852
853
854	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
855	chmod u+x $interpreted_config_file
856	export PATH=$PATH:.
857	. $interpreted_config_file
858	rm $interpreted_config_file
859
860
861	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
862	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
863	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
864	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
865	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
866
867	fi
868
869
870	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
871	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
872	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
873	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
874	if [[ "$SOURCES_COMPLETE" = "" ]]
875	then
876
877	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
878	# VEREINBART WURDE
879	source_path=""
880	line=""
881	grep "%source_path" $config_file > tmp_mrun
882	while read line
883	do
884	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
885	then
886	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
887	then
888	global_source_path=`echo $line \| cut -d" " -f2`
889	fi
890	fi
891	done < tmp_mrun
892
893	line=""
894	found=false
895	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
896	while read line
897	do
898	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
899	then
900	if [[ $found = true ]]
901	then
902	printf "\n\n +++ more than one source path found in configuration file"
903	printf "\n for local host \"$localhost\" "
904	locat=source_path; exit
905	fi
906	source_path=`echo $line \| cut -d" " -f2`
907	found=true
908	fi
909	done < tmp_mrun
910	rm tmp_mrun
911
912	if [[ "$source_path" = "" ]]
913	then
914	if [[ "$global_source_path" != "" ]]
915	then
916	source_path=$global_source_path
917	else
918	printf "\n\n +++ no source path found in configuration file"
919	printf "\n for local host \"$localhost\" "
920	locat=source_path; exit
921	fi
922	fi
923	eval source_path=$source_path
924
925	if [[ ! -d $source_path ]]
926	then
927	printf "\n\n +++ source path \"$source_path\" on local host"
928	printf "\n \"$localhost\" does not exist"
929	locat=source_path; exit
930	fi
931
932	fi
933
934
935	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
936	# DURCH OPTION -G MITGETEILT)
937	if [[ "$global_revision" = "" ]]
938	then
939	global_revision=`svnversion $source_path 2>/dev/null`
940	global_revision="Rev: $global_revision"
941	fi
942
943
944	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
945	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
946	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
947	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
948	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
949	if [[ -n $host && "$host" != $localhost ]]
950	then
951	do_batch=true
952	do_remote=true
953	case $host in
954	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
955	(*) printf "\n"
956	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
957	printf "\n is not available"
958	locat=nqs; (( iec = 0 )); exit;;
959	esac
960	else
961	host=$localhost
962	fi
963
964
965	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
966	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
967	then
968
969	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
970	if [[ ! -n $numprocs ]]
971	then
972	printf "\n"
973	printf "\n +++ option \"-K parallel\" requires additional specification"
974	printf "\n of the number of processors to be used by"
975	printf "\n mrun-option \"-X\" or by environment-variable"
976	printf "\n \"numprocs\" in the configuration file"
977	locat=numprocs; (( iec = 0 )); exit
978	fi
979
980	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
981	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
982	# GESAMTPROZESSORANZAHL IST
983	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
984	then
985	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
986	(( ival = $tasks_per_node ))
987	(( pes = numprocs ))
988	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
989	# then
990	# (( pes = pes - 1 ))
991	# fi
992	(( ii = pes / ival ))
993	if (( pes - ii * ival > 0 ))
994	then
995	printf "\n"
996	printf "\n +++ tasks per node (option \"-T\") must be an integral"
997	printf "\n divisor of the total number of processors (option \"-X\")"
998	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
999	locat=tasks_per_node; (( iec = 0 )); exit
1000	fi
1001	fi
1002
1003	# IBMY HAT NUR EINEN KNOTEN
1004	if [[ $host = ibmy ]]
1005	then
1006	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
1007	then
1008	printf "\n"
1009	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1010	printf "\n total number of processors (option \"-X\")"
1011	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1012	locat=tasks_per_node; (( iec = 0 )); exit
1013	fi
1014	fi
1015
1016	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1017	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1018	if [[ $use_openmp = true ]]
1019	then
1020	threads_per_task=$tasks_per_node
1021	tasks_per_node=1
1022	fi
1023	OOPT="-O $threads_per_task"
1024	TOPT="-T $tasks_per_node"
1025
1026	# GESAMTZAHL DER KNOTEN BESTIMMEN
1027	if [[ "$tasks_per_node" != "" ]]
1028	then
1029	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1030	fi
1031
1032	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1033	# SETZEN
1034	if [[ $node_usage = default ]]
1035	then
1036	if [[ $host = ibms ]]
1037	then
1038	node_usage=shared
1039	elif [[ $host = lctit ]]
1040	then
1041	node_usage=sla3
1042	else
1043	node_usage=not_shared
1044	fi
1045	fi
1046	if [[ $node_usage != shared && $node_usage != not_shared && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
1047	then
1048	printf "\n"
1049	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1050	printf "\n \"shared\" or \"not_shared\""
1051	locat=tasks_per_node; (( iec = 0 )); exit
1052	fi
1053
1054	fi
1055
1056	# PRUEFEN, OB HOSTFILE EXISTIERT
1057	if [[ -n $hostfile ]]
1058	then
1059	if [[ ! -f $hostfile ]]
1060	then
1061	printf "\n"
1062	printf "\n +++ hostfile \"$hostfile\" does not exist"
1063	locat=hostfile; exit
1064	fi
1065	fi
1066
1067	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1068	if [[ $host = ibmy && $do_remote = false ]]
1069	then
1070	if [[ ! -f $HOME/.rhosts ]]
1071	then
1072	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1073	printf "\n\n *** file:"
1074	printf "\n $HOME/.rhosts"
1075	printf "\n was created\n"
1076	fi
1077	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1078	then
1079	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1080	printf "\n\n *** file:"
1081	printf "\n $HOME/.rhosts"
1082	printf "\n was extended by the name of the current host\n"
1083	fi
1084	fi
1085
1086
1087
1088	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1089	if [[ $queue = none ]]
1090	then
1091	case $host in
1092	(ibmb) if [[ $node_usage = shared ]]
1093	then
1094	queue=cshare
1095	else
1096	queue=csolo
1097	fi;;
1098	(ibmh) if [[ $node_usage = shared ]]
1099	then
1100	queue=cshare
1101	else
1102	queue=csolo
1103	fi;;
1104	(ibmy) queue=parallel;;
1105	(lctit) queue=sla3;;
1106	(nech) queue=none;;
1107	(neck) queue=P;;
1108	(unics) queue=unics;;
1109	esac
1110	fi
1111
1112
1113	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1114	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1115	# ERMITTELN
1116	(( i = 0 ))
1117	while (( i < iin ))
1118	do
1119	(( i = i + 1 ))
1120	(( maxcycle = 0 ))
1121
1122	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1123	if [[ "${actionin[$i]}" = di ]]
1124	then
1125	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1126	# REM-MASCHINE AUSWERTEN
1127	eval filename=${pathin[$i]}/${endin[$i]}
1128	else
1129	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1130	# REM-MASCHINE AUSWERTEN
1131	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1132	fi
1133
1134	# PRUEFEN AUF VORHANDENSEIN
1135	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1136	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1137	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1138	then
1139	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1140	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1141	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1142	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1143	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1144	if [[ "${transin[$i]}" != "locopt" ]]
1145	then
1146	printf "\n\n +++ INPUT-file: "
1147	if [[ "${extin[$i]}" = "" ]]
1148	then
1149	printf "\n $filename"
1150	else
1151	printf "\n $filename.${extin[$i]}"
1152	fi
1153	printf "\n does not exist\n"
1154	locat=input; exit
1155	else
1156	transin[$i]="unavailable"
1157	fi
1158	else
1159
1160	# ZYKLUSNUMMER FESTSTELLEN
1161	ls -1 -d $filename > filelist 2>/dev/null
1162	ls -1 -d $filename.* >> filelist 2>/dev/null
1163	while read zeile
1164	do
1165	cycle=$(print $zeile \| cut -f2 -d".")
1166	if [[ "$cycle" = "$zeile" ]]
1167	then
1168	(( icycle = 0 ))
1169	elif [[ "$cycle" = "${extin[$i]}" ]]
1170	then
1171	(( icycle = 0 ))
1172	else
1173	(( icycle = $cycle ))
1174	fi
1175	if (( icycle > maxcycle ))
1176	then
1177	(( maxcycle = icycle ))
1178	file_to_be_used=$zeile
1179	fi
1180	done <filelist
1181	rm filelist
1182
1183	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1184	if (( maxcycle > 0 ))
1185	then
1186	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1187	then
1188	filename=${filename}.$maxcycle.${extin[$i]}
1189	else
1190	filename=${filename}.$maxcycle
1191	fi
1192	else
1193	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1194	then
1195	filename=${filename}.${extin[$i]}
1196	fi
1197	fi
1198
1199	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1200	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1201	absnamein[$i]=$filename
1202	if (( maxcycle > 0 ))
1203	then
1204	if [[ "${actionin[$i]}" = di ]]
1205	then
1206	frelin[$i]=${endin[$i]}.$maxcycle
1207	else
1208	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1209	fi
1210	else
1211	if [[ "${actionin[$i]}" = di ]]
1212	then
1213	frelin[$i]=${endin[$i]}
1214	else
1215	frelin[$i]=${afname}${endin[$i]}
1216	fi
1217	fi
1218
1219	fi
1220	done
1221
1222
1223	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1224	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1225	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1226	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1227	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1228	(( i = 0 ))
1229	while (( i < iout ))
1230	do
1231	(( i = i + 1 ))
1232	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1233	then
1234	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1235	then
1236	actionout[$i]=""
1237	elif [[ "${actionout[$i]}" = tra ]]
1238	then
1239	actionout[$i]=a
1240	fi
1241	(( maxcycle = 0 ))
1242	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1243	eval catalogname=${pathout[$i]}
1244	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1245	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1246	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1247	then
1248
1249	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1250	if cat /dev/null > $filename
1251	then
1252	rm $filename
1253	else
1254
1255	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1256	if [[ ! -d $catalogname ]]
1257	then
1258	if mkdir -p $catalogname
1259	then
1260	printf "\n\n *** directory:"
1261	printf "\n $catalogname"
1262	printf "\n was created\n"
1263	else
1264	printf "\n\n +++ OUTPUT-file:"
1265	printf "\n $filename"
1266	printf "\n cannot be created, because directory does not exist"
1267	printf "\n and cannot be created either"
1268	printf "\n"
1269	locat=output ; exit
1270	fi 2>/dev/null
1271	else
1272	printf "\n\n +++ OUTPUT-file:"
1273	printf "\n $filename"
1274	printf "\n cannot be created, although directory exists"
1275	printf "\n"
1276	locat=output ; exit
1277	fi
1278	fi 2>/dev/null
1279	else
1280
1281	# ZYKLUSNUMMER FESTSTELLEN
1282	ls -1 -d $filename > filelist 2>/dev/null
1283	ls -1 -d $filename.* >> filelist 2>/dev/null
1284	while read zeile
1285	do
1286	cycle=$(print $zeile \| cut -f2 -d".")
1287	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1288	then
1289	(( icycle = 1 ))
1290	else
1291	(( icycle = $cycle + 1 ))
1292	fi
1293	if (( icycle > maxcycle ))
1294	then
1295	(( maxcycle = icycle ))
1296	fi
1297	done <filelist
1298	rm filelist
1299	fi
1300
1301	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1302	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1303	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1304	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1305	if [[ "${actionout[$i]}" != a ]]
1306	then
1307	if (( maxcycle > 0 ))
1308	then
1309	filename=${filename}.$maxcycle
1310	if cat /dev/null > $filename
1311	then
1312	rm $filename
1313	else
1314	printf "\n +++ OUTPUT-file:"
1315	printf "\n $filename"
1316	printf "\n cannot be created"
1317	locat=output ; exit
1318	fi
1319	fi
1320	else
1321	(( maxcycle = maxcycle - 1 ))
1322	if (( maxcycle > 0 ))
1323	then
1324	filename=${filename}.$maxcycle
1325	fi
1326	fi
1327
1328	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1329	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1330	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1331	pathout[$i]=$filename
1332	if (( maxcycle > 0 ))
1333	then
1334	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1335	else
1336	frelout[$i]=${fname}${endout[$i]}
1337	fi
1338
1339	fi
1340	done
1341
1342
1343	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1344	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1345	then
1346	if [[ "$dvrp_inc" = "" ]]
1347	then
1348	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1349	printf "\n This is required for the dvrp_graphics package.\n"
1350	locat=dvrp; exit
1351	fi
1352	if [[ "$dvrp_lib" = "" ]]
1353	then
1354	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1355	printf "\n This is required for the dvrp_graphics package.\n"
1356	locat=dvrp; exit
1357	fi
1358	fi
1359
1360
1361	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1362	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1363	# UEBERSETZT ZU WERDEN)
1364	if [[ "$mainprog" = "" && "$executable" = "" ]]
1365	then
1366	printf "\n +++ neither main program nor executable defined"
1367	locat=source; exit
1368	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1369	then
1370	printf "\n +++ main program as well as executable defined"
1371	locat=source; exit
1372	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1373	then
1374	do_compile=false
1375	fi
1376
1377
1378	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1379	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1380	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1381	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1382	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1383	then
1384
1385	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1386	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1387
1388	if [[ $restart_run != true ]]
1389	then
1390	rm -rf SOURCES_FOR_RUN_$fname
1391	mkdir SOURCES_FOR_RUN_$fname
1392	fi
1393
1394
1395	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1396	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1397	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1398	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1399	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1400	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1401	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1402	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1403	# GESAMMELT
1404	if [[ "$source_list" = WRITE_PERMIT ]]
1405	then
1406
1407	source_list=""
1408	cd $source_path
1409
1410
1411	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1412	Names=$(ls -1 *.f90 2>&1)
1413	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1414	Names=$(ls -1 *.F90 2>&1)
1415	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1416	Names=$(ls -1 *.F 2>&1)
1417	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1418	Names=$(ls -1 *.f 2>&1)
1419	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1420	Names=$(ls -1 *.c 2>&1)
1421	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1422
1423
1424	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1425	for dateiname in $Filenames
1426	do
1427	if [[ -w $dateiname ]]
1428	then
1429	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1430	then
1431	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1432	source_list=$source_list"$dateiname "
1433	fi
1434	fi
1435	done
1436
1437	cd - > /dev/null
1438
1439
1440	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1441	then
1442
1443	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1444	source_list=""
1445	cd $source_path
1446
1447
1448	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1449	if [[ ! -d .svn ]]
1450	then
1451	printf "\n\n +++ source directory"
1452	printf "\n \"$source_path\" "
1453	printf "\n is not under control of \"subversion\"."
1454	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1455	fi
1456
1457
1458	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1459	Filenames=""
1460	svn status > tmp_mrun
1461	while read line
1462	do
1463	firstc=`echo $line \| cut -c1`
1464	if [[ $firstc = M \|\| $firstc = "?" ]]
1465	then
1466	Name=`echo "$line" \| cut -c8-`
1467	extension=`echo $Name \| cut -d. -f2`
1468	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1469	then
1470	Filenames="$Filenames "$Name
1471	fi
1472	fi
1473	done < tmp_mrun
1474
1475
1476	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1477	for dateiname in $Filenames
1478	do
1479	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1480	source_list=$source_list"$dateiname "
1481	done
1482
1483	cd - > /dev/null
1484
1485
1486	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1487	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1488	# VORHANDEN
1489	elif [[ "$source_list" != "" && $restart_run != true ]]
1490	then
1491
1492	cd $source_path
1493
1494	for filename in $source_list
1495	do
1496
1497	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1498	if [[ $(print $filename \| grep -c "/") != 0 ]]
1499	then
1500	printf "\n +++ source code file: $filename"
1501	printf "\n must not contain (\"/\") "
1502	locat=source; exit
1503	fi
1504
1505	if [[ ! -f $filename ]]
1506	then
1507	printf "\n +++ source code file: $filename"
1508	printf "\n does not exist"
1509	locat=source; exit
1510	else
1511	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1512	fi
1513
1514	done
1515
1516	cd - > /dev/null
1517
1518	fi
1519
1520
1521	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1522	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1523	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1524	if [[ $restart_run != true ]]
1525	then
1526
1527	if [[ ! -f "$source_path/$mainprog" ]]
1528	then
1529	printf "\n\n +++ main program: $mainprog"
1530	printf "\n does not exist in source directory"
1531	printf "\n \"$source_path\"\n"
1532	locat=source; exit
1533	else
1534	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1535	then
1536	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1537	source_list=${mainprog}" $source_list"
1538	fi
1539	fi
1540	fi
1541
1542
1543	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1544	if [[ $restart_run != true && "$add_source_path" != "" ]]
1545	then
1546
1547	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1548	if [[ ! -d $add_source_path ]]
1549	then
1550	printf "\n\n +++ WARNING: additional source code directory"
1551	printf "\n \"$add_source_path\" "
1552	printf "\n does not exist or is not a directory."
1553	printf "\n No source code will be used from this directory!\n"
1554	add_source_path=""
1555	sleep 3
1556	else
1557
1558	cd $add_source_path
1559
1560	Names=$(ls -1 *.f90 2>&1)
1561	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1562	Names=$(ls -1 *.F90 2>&1)
1563	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1564	Names=$(ls -1 *.F 2>&1)
1565	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1566	Names=$(ls -1 *.f 2>&1)
1567	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1568	Names=$(ls -1 *.c 2>&1)
1569	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1570
1571	cd - > /dev/null
1572	cd SOURCES_FOR_RUN_$fname
1573
1574	for dateiname in $AddFilenames
1575	do
1576	if [[ -f $dateiname ]]
1577	then
1578	printf "\n +++ source code file \"$dateiname\" found in additional"
1579	printf "\n source code directory \"$add_source_path\" "
1580	printf "\n as well as in directory \"$source_path\"."
1581	locat=source; exit
1582	fi
1583
1584	cp $add_source_path/$dateiname .
1585	source_list="$source_list $dateiname"
1586
1587	# Default User-Interface von der Liste entfernen, falls Datei
1588	# ein User-Interface enthaelt
1589	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1590	then
1591	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1592	then
1593	rm -rf user_interface.f90
1594	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1595	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1596	printf "\n since a user-interface is found in file"
1597	printf "\n \"$add_source_path/$dateiname\" \n"
1598	sleep 3
1599	else
1600	printf "\n\n *** user-interface file \"$dateiname\" "
1601	printf "\n added to the files to be translated \n"
1602	sleep 3
1603	fi
1604	fi
1605	done
1606
1607	cd - > /dev/null
1608	fi
1609	fi
1610
1611
1612	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1613	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1614	if [[ $restart_run != true && -n $package_list ]]
1615	then
1616
1617	cd $source_path
1618
1619	for package in $package_list
1620	do
1621
1622	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1623
1624	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1625	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1626	# LIEFERT
1627	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1628
1629
1630	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1631	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1632	for source_list_name in $package_source_list
1633	do
1634	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1635	then
1636
1637	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1638	ending=`echo $source_list_name \| cut -f2 -d.`
1639	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1640	then
1641	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1642	source_list="$source_list $source_list_name"
1643	fi
1644	fi
1645	done
1646	done
1647
1648	cd - > /dev/null
1649	fi
1650
1651
1652	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1653	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1654	if [[ "$restart_run" != true ]]
1655	then
1656	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1657	if [[ ! -f $makefile ]]
1658	then
1659	printf "\n +++ file \"$makefile\" does not exist"
1660	locat=make; exit
1661	else
1662	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1663	fi
1664	fi
1665
1666	fi # do_compile=true
1667
1668
1669	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1670	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1671	if [[ $do_compile = true ]]
1672	then
1673
1674	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1675	# ZUSAMMENSETZEN
1676	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1677	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1678	then
1679	cpp_options="${cpp_options},-D__ibm=__ibm"
1680	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1681	then
1682	cpp_options="$cpp_options -D__nec"
1683	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1684	then
1685	cpp_options="$cpp_options -D__lc"
1686	else
1687	cpp_options="$cpp_options -D__$localhost"
1688	fi
1689
1690	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1691	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1692	then
1693	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1694	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1695	else
1696	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1697	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1698	fi
1699
1700	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1701	if [[ -n $package_list ]]
1702	then
1703	for package in $package_list
1704	do
1705	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1706	then
1707	if [[ $package != "dvrp_graphics+1PE" ]]
1708	then
1709	cpp_options="${cpp_options},-D__$package=__$package"
1710	else
1711	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1712	export use_seperate_pe_for_dvrp_output=true
1713	fi
1714	else
1715	if [[ $package != "dvrp_graphics+1PE" ]]
1716	then
1717	cpp_options="$cpp_options -D__$package"
1718	else
1719	cpp_options="$cpp_options -D__dvrp_graphics"
1720	export use_seperate_pe_for_dvrp_output=true
1721	fi
1722	fi
1723	done
1724	fi
1725
1726	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1727	if [[ -n $cpp_opts ]]
1728	then
1729	for popts in $cpp_opts
1730	do
1731	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1732	then
1733	cpp_options="${cpp_options},-D__$popts=__$popts"
1734	else
1735	cpp_options="$cpp_options -D__$popts"
1736	fi
1737	done
1738	fi
1739
1740	else
1741
1742
1743	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1744	if [[ $do_remote = false ]]
1745	then
1746	if [[ ! -f $executable ]]
1747	then
1748	printf "\n +++ executable file: $executable"
1749	printf "\n does not exist"
1750	locat=executable; exit
1751	fi
1752	fi
1753	fi
1754
1755
1756	# JOBMODUS FESTSTELLEN
1757	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1758	then
1759	jobmo=BATCH
1760	else
1761	jobmo=INTERACTIVE
1762	fi
1763
1764
1765	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1766	# DURCH BENUTZER ANDERWEITIG VEREINBART
1767	if [[ "$compiler_name" = "" ]]
1768	then
1769
1770	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1771	locat=compiler_name; exit
1772
1773	fi
1774
1775
1776	# COMPILER AUF NECK UEBERSCHREIBEN
1777	[[ $localhost = neck ]] && compiler_name=mpif90
1778
1779
1780
1781	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1782	kennung=$RANDOM
1783	if [[ "$tmp_user_catalog" = "" ]]
1784	then
1785	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1786	then
1787	tmp_user_catalog=$TMPDIR
1788	elif [[ $localhost = nech ]]
1789	then
1790	tmp_user_catalog=$WRKSHR
1791	else
1792	tmp_user_catalog=/tmp
1793	fi
1794	fi
1795	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1796
1797
1798	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1799	# BESTIMMEN
1800	if [[ "$tmp_data_catalog" = "" ]]
1801	then
1802	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1803	then
1804	tmp_data_catalog=$WORK/mrun_restart_data
1805	elif [[ $localhost = nech ]]
1806	then
1807	tmp_data_catalog=$WRKSHR/mrun_restart_data
1808	else
1809	tmp_data_catalog=/tmp/mrun_restart_data
1810	fi
1811	fi
1812
1813
1814	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1815	# ERSETZEN
1816	if [[ $do_remote = false && $do_compile = true ]]
1817	then
1818	eval fopts=\"$fopts\"
1819	eval lopts=\"$lopts\"
1820	fi
1821
1822
1823
1824	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1825	fopts="$fopts $netcdf_inc $dvrp_inc"
1826	lopts="$lopts $netcdf_lib $dvrp_lib"
1827	ROPTS="$ropts"
1828	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
1829	then
1830	XOPT="-X $numprocs"
1831	fi
1832
1833
1834
1835	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1836	# GRAMM BENOETIGT
1837	done=false
1838	while [[ $done = false ]]
1839	do
1840	cputime=$cpumax
1841	if (( $cputime == 0 ))
1842	then
1843	printf "\n +++ cpu-time is undefined"
1844	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1845	printf "\n >>> "
1846	read cputime 1>/dev/null 2>&1
1847	else
1848	done=true
1849	fi
1850	cpumax=$cputime
1851	done
1852
1853	(( minuten = cputime / 60 ))
1854	(( sekunden = cputime - minuten * 60 ))
1855
1856
1857	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1858	if [[ $do_batch = true ]]
1859	then
1860	done=false
1861	while [[ $done = false ]]
1862	do
1863	if (( memory == 0 ))
1864	then
1865	printf "\n +++ memory demand is undefined"
1866	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1867	printf "\n >>> "
1868	read memory 1>/dev/null 2>&1
1869	else
1870	done=true
1871	fi
1872	done
1873	fi
1874
1875
1876	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1877	if [[ $do_remote = true && -z $remote_username ]]
1878	then
1879	while [[ -z $remote_username ]]
1880	do
1881	printf "\n +++ username on remote host \"$host\" is undefined"
1882	printf "\n >>> Please type username:"
1883	printf "\n >>> "
1884	read remote_username
1885	done
1886	mc="$mc -u$remote_username"
1887	fi
1888
1889	###########################################################################
1890	# HEADER-AUSGABE
1891	###########################################################################
1892
1893
1894	calltime=$(date)
1895	printf "\n"
1896	# [[ $silent = false ]] && clear
1897	printf "#--------------------------------------------------------------# \n"
1898	printf "\| $version$calltime \| \n"
1899	printf "\| \| \n"
1900	spalte1="called on:"; spalte2=$localhost_realname
1901	printf "\| $spalte1$spalte2 \| \n"
1902	if [[ $local_compile = false ]]
1903	then
1904	if [[ $do_remote = true ]]
1905	then
1906	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1907	else
1908	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1909	fi
1910	else
1911	spalte1="compiling test only!"; spalte2=""
1912	fi
1913	printf "\| $spalte1$spalte2 \| \n"
1914	if [[ -n $numprocs ]]
1915	then
1916	spalte1="number of PEs:"; spalte2=$numprocs
1917	printf "\| $spalte1$spalte2 \| \n"
1918	fi
1919	if [[ -n $tasks_per_node ]]
1920	then
1921	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1922	printf "\| $spalte1$spalte2 \| \n"
1923	fi
1924	if [[ $threads_per_task != 1 ]]
1925	then
1926	spalte1="threads per task:"; spalte2="$threads_per_task"
1927	printf "\| $spalte1$spalte2 \| \n"
1928	fi
1929	printf "\| \| \n"
1930	if [[ $do_compile = true ]]
1931	then
1932	spalte1=cpp-directives:; spalte2=$cpp_options
1933	printf "\| $spalte1$spalte2 \| \n"
1934	zeile=$(echo "$cpp_options" \| cut -c41-)
1935	while [[ "$zeile" != "" ]]
1936	do
1937	spalte1=""
1938	spalte2=$zeile
1939	printf "\| $spalte1$spalte2 \| \n"
1940	zeile=$(echo "$zeile" \| cut -c41-)
1941	done
1942
1943	spalte1=compiler-options:; spalte2="$fopts"
1944	printf "\| $spalte1$spalte2 \| \n"
1945	zeile=$(echo "$fopts" \| cut -c41-)
1946	while [[ "$zeile" != "" ]]
1947	do
1948	spalte1=""
1949	spalte2=$zeile
1950	printf "\| $spalte1$spalte2 \| \n"
1951	zeile=$(echo "$zeile" \| cut -c41-)
1952	done
1953
1954	spalte1=linker-options:; spalte2=$lopts
1955	printf "\| $spalte1$spalte2 \| \n"
1956	zeile=$(echo "$lopts" \| cut -c41-)
1957	while [[ "$zeile" != "" ]]
1958	do
1959	spalte1=""
1960	spalte2=$zeile
1961	printf "\| $spalte1$spalte2 \| \n"
1962	zeile=$(echo "$zeile" \| cut -c41-)
1963	done
1964
1965	spalte1="main program":; spalte2=$mainprog
1966	printf "\| $spalte1$spalte2 \| \n"
1967	else
1968	spalte1=executable:; spalte2=$executable
1969	printf "\| $spalte1$spalte2 \| \n"
1970	fi
1971	printf "\| \| \n"
1972	spalte1="base name of files":; spalte2=$fname
1973	printf "\| $spalte1$spalte2 \| \n"
1974	if [[ $fname != $afname ]]
1975	then
1976	spalte1="base name of input files":; spalte2=$afname
1977	printf "\| $spalte1$spalte2 \| \n"
1978	fi
1979	spalte1="INPUT control list":; spalte2=$input_list
1980	printf "\| $spalte1$spalte2 \| \n"
1981	spalte1="OUTPUT control list":; spalte2=$output_list
1982	printf "\| $spalte1$spalte2 \| \n"
1983
1984	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
1985	then
1986	spalte1="memory demand / PE":; spalte2="$memory MB"
1987	printf "\| $spalte1$spalte2 \| \n"
1988	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
1989	printf "\| $spalte1$spalte2 \| \n"
1990	fi
1991
1992	if [[ $do_compile = true ]]
1993	then
1994	printf "\| \| \n"
1995	printf "\| Files to be compiled: \| \n"
1996	zeile=$source_list
1997	while [[ "$zeile" != "" ]]
1998	do
1999	spalte3=$zeile
2000	printf "\| $spalte3 \| \n"
2001	zeile=$(echo "$zeile" \| cut -c61-)
2002	done
2003	fi
2004	printf "#--------------------------------------------------------------#"
2005
2006
2007
2008	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2009	if [[ $do_trace = true ]]
2010	then
2011	(( i = 0 ))
2012	while (( i < iin ))
2013	do
2014	(( i = i + 1 ))
2015	if (( i == 1 ))
2016	then
2017	printf "\n\n >>> INPUT-file assignments:\n"
2018	fi
2019	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2020	done
2021	(( i = 0 ))
2022	while (( i < iout ))
2023	do
2024	(( i = i + 1 ))
2025	if (( i == 1 ))
2026	then
2027	printf "\n\n >>> OUTPUT-file assignments:\n"
2028	fi
2029	printf "\n ${localout[$i]} : ${pathout[$i]}"
2030	done
2031	(( i = 0 ))
2032	while (( i < iic ))
2033	do
2034	(( i = i + 1 ))
2035	if (( i == 1 ))
2036	then
2037	printf "\n\n >>> INPUT-commands:\n"
2038	fi
2039	printf "\n ${in_command[$i]}"
2040	done
2041	(( i = 0 ))
2042	while (( i < ioc ))
2043	do
2044	(( i = i + 1 ))
2045	if (( i == 1 ))
2046	then
2047	printf "\n\n >>> OUTPUT-commands:\n"
2048	fi
2049	printf "\n ${out_command[$i]}"
2050	done
2051	fi
2052
2053
2054	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2055	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2056	then
2057	antwort=dummy
2058	printf "\n\n"
2059	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2060	do
2061	printf " >>> everything o.k. (y/n) ? "
2062	read antwort
2063	done
2064	if [[ $antwort = n \|\| $antwort = N ]]
2065	then
2066	locat=user_abort; (( iec = 0 )); exit
2067	fi
2068	if [[ $do_batch = true ]]
2069	then
2070	printf " >>> batch-job will be created and submitted"
2071	else
2072	if [[ $local_compile = false ]]
2073	then
2074	printf " >>> MRUN will now continue to execute on this machine"
2075	else
2076	printf " >>> a test compilation will now be carried out on this machine"
2077	fi
2078	fi
2079	fi
2080
2081
2082
2083
2084	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2085	# CHENDE AKTIONEN DURCHGEFUEHRT
2086	if [[ $do_batch = false ]]
2087	then
2088
2089
2090	# TEMPORAEREN KATALOG ERZEUGEN
2091	mkdir -p $TEMPDIR
2092	chmod go+rx $TEMPDIR
2093	tmpcreate=true
2094
2095
2096	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2097	# TEMPORAERES VERZEICHNIS KOPIEREN
2098	if [[ $do_compile = true ]]
2099	then
2100
2101	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2102	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2103	if [[ $localhost = nech ]]
2104	then
2105	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2106	if mkdir -p $TEMPDIR_COMPILE
2107	then
2108	printf "\n *** \"$TEMPDIR_COMPILE\" "
2109	printf "\n is generated as temporary directory for cross compiling\n"
2110	else
2111	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2112	printf "\n needed for cross compilation failed"
2113	locat=compile
2114	exit
2115	fi
2116	else
2117	TEMPDIR_COMPILE=$TEMPDIR
2118	fi
2119
2120
2121	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2122	line=""
2123	grep "%depository_path" $config_file > tmp_mrun
2124	while read line
2125	do
2126	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2127	then
2128	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2129	then
2130	global_depository_path=`echo $line \| cut -d" " -s -f2`
2131	fi
2132	fi
2133	done < tmp_mrun
2134
2135	line=""
2136	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2137	while read line
2138	do
2139	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2140	then
2141	local_depository_path=`echo $line \| cut -d" " -s -f2`
2142	fi
2143	done < tmp_mrun
2144
2145	if [[ "$local_depository_path" = "" ]]
2146	then
2147	if [[ "$global_depository_path" != "" ]]
2148	then
2149	local_depository_path=$global_depository_path
2150	else
2151	printf "\n\n +++ no depository path found in configuration file"
2152	printf "\n for local host \"$localhost\" "
2153	printf "\n please set \"\%depository_path\" in configuration file\n"
2154	locat=config_file; exit
2155	fi
2156	fi
2157	eval local_depository_path=$local_depository_path
2158
2159	basename=`print $mainprog \| cut -f1 -d"."`
2160	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2161	if [[ ! -f $make_depository ]]
2162	then
2163	printf "\n"
2164	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2165	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2166	else
2167	cp $make_depository $TEMPDIR_COMPILE
2168	cd $TEMPDIR_COMPILE
2169	tar -xf $make_depository > /dev/null 2>&1
2170	cd - > /dev/null
2171	fi
2172
2173	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2174
2175	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2176	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2177	# MAKEFILE EINTRAGEN
2178	cd $TEMPDIR_COMPILE
2179	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2180	if [[ "$interface_file" != "" ]]
2181	then
2182	interface_file=`echo $interface_file \| cut -d"." -f1`
2183	mv Makefile Makefile_old
2184	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2185	fi
2186	cd - > /dev/null
2187	else
2188	cp $executable ${TEMPDIR}/a.out
2189	fi
2190
2191
2192	# WECHSEL IN TEMPORAEREN KATALOG
2193	cd $TEMPDIR
2194	printf "\n *** changed to temporary directory: $TEMPDIR"
2195
2196
2197	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2198	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2199	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2200	# ERMITTELN
2201	(( i = 0 ))
2202	while (( i < iout ))
2203	do
2204	(( i = i + 1 ))
2205	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2206	then
2207	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2208	else
2209	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2210	fi
2211	done
2212
2213
2214	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2215	if [[ $do_compile = true ]]
2216	then
2217
2218
2219	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2220	printf "\n\n\n *** compilation starts \n$striche\n"
2221	printf " *** compilation with make using following options:\n"
2222	printf " compilername: $compiler_name\n"
2223	printf " options: $fopts\n"
2224	printf " preprocessor-directives: $cpp_options \n"
2225	printf " linker-options: $lopts \n"
2226	printf " source code files: $source_list \n"
2227
2228	if [[ $localhost = nech ]]
2229	then
2230	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2231	cp $TEMPDIR_COMPILE/a.out .
2232	[[ $? != 0 ]] && compile_error=true
2233	rm -rf $TEMPDIR_COMPILE
2234	else
2235	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2236	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2237	fi
2238
2239	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2240	then
2241	printf "\n +++ error occured while compiling or linking"
2242	locat=compile
2243	exit
2244	else
2245	printf "$striche\n *** compilation finished \n"
2246	fi
2247	fi
2248
2249
2250	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2251	if [[ $local_compile = true ]]
2252	then
2253	cd $HOME
2254	rm -rf $TEMPDIR
2255	locat=local_compile; exit
2256	fi
2257
2258
2259	# BEREITSTELLEN DER INPUT-DATEIEN
2260	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2261	(( i = 0 ))
2262	while (( i < iin ))
2263	do
2264	(( i = i + 1 ))
2265	if (( i == 1 ))
2266	then
2267	printf "\n\n *** providing INPUT-files:\n$striche"
2268	fi
2269
2270
2271	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2272	if [[ "${transin[$i]}" = unavailable ]]
2273	then
2274	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2275	then
2276	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2277	printf "\n is not available!"
2278	else
2279	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2280	printf "\n is not available!"
2281	fi
2282	continue
2283	fi
2284
2285	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2286	files_for_pes=false; datentyp=file
2287	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2288	then
2289	files_for_pes=true; datentyp=directory
2290	actionin[$i]=""
2291	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2292	then
2293	actionin[$i]=""
2294	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2295	then
2296	files_for_pes=true; datentyp=directory
2297	actionin[$i]="ar"
2298	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2299	then
2300	actionin[$i]="ar"
2301	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2302	then
2303	files_for_pes=true; datentyp=directory
2304	actionin[$i]="fl"
2305	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2306	then
2307	actionin[$i]="fl"
2308	fi
2309
2310	if [[ $files_for_pes = true ]]
2311	then
2312	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2313	else
2314	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2315	fi
2316
2317	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2318	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2319	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2320	# SERVER ZU HOLEN
2321	if [[ "${actionin[$i]}" = fl ]]
2322	then
2323	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2324	if [[ $files_for_pes = false ]]
2325	then
2326	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2327	then
2328	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2329	got_tmp[$i]=true
2330	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2331	then
2332	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2333	printf "\n *** trying to use backup copy in \"$WORK\" "
2334	cp $WORK/${frelin[$i]} ${localin[$i]}
2335	else
2336	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2337	printf "\n or \"$tmp_data_catalog\" does not exist!"
2338	printf "\n *** trying to get copy from archive"
2339	actionin[$i]=ar
2340	fi
2341	else
2342	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2343	then
2344	mkdir ${localin[$i]}
2345	cd $tmp_data_catalog/${frelin[$i]}
2346	for file in $(ls *)
2347	do
2348	ln $file $TEMPDIR/${localin[$i]}
2349	done
2350	cd $TEMPDIR
2351	got_tmp[$i]=true
2352	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2353	then
2354	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2355	printf "\n *** trying to use backup copy in \"$WORK\" "
2356	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2357	else
2358	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2359	printf "\n or \"$tmp_data_catalog\" does not exist!"
2360	printf "\n *** trying to get copy from archive"
2361	actionin[$i]=ar
2362	fi
2363	fi
2364	fi
2365
2366
2367	# DATEI LIEGT AUF ARCHIV-SERVER
2368	if [[ "${actionin[$i]}" = ar ]]
2369	then
2370
2371	if [[ $files_for_pes = false ]]
2372	then
2373	printf "\n file will be restored from archive-system ($archive_system)!"
2374	else
2375	printf "\n directory will be restored from archive-system ($archive_system)!"
2376	fi
2377
2378	file_restored=false
2379
2380	if [[ $archive_system = asterix ]]
2381	then
2382	do_stagein=true
2383	(( stagein_anz = 0 ))
2384	while [[ $do_stagein = true ]]
2385	do
2386	if [[ $files_for_pes = false ]]
2387	then
2388	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2389	else
2390	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2391	fi
2392	cat STAGEIN_OUTPUT
2393	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2394	then
2395	file_restored=true
2396	do_stagein=false
2397	else
2398	(( stagein_anz = stagein_anz + 1 ))
2399	if (( stagein_anz == 10 ))
2400	then
2401	printf "\n +++ stagein stoped after 10 tries"
2402	locat=stage
2403	exit
2404	fi
2405	printf "\n +++ restoring from archive failed, trying again:"
2406	sleep 900
2407	fi
2408	done
2409	elif [[ $archive_system = DMF ]]
2410	then
2411	if [[ $files_for_pes = false ]]
2412	then
2413	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2414	locat=DMF
2415	exit
2416	else
2417	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2418	cp -r $ARCHIVE/${frelin[$i]} $PWD
2419	file_restored=true
2420	fi
2421	elif [[ $archive_system = tivoli ]]
2422	then
2423	if [[ $files_for_pes = false ]]
2424	then
2425	if [[ $localhost = ibmh ]]
2426	then
2427	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2428	else
2429	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2430	fi
2431	else
2432	(( inode = 0 ))
2433	while (( inode < nodes ))
2434	do
2435	if [[ $localhost = ibmh ]]
2436	then
2437	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2438	else
2439	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2440	fi
2441	(( inode = inode + 1 ))
2442	done
2443	fi
2444	file_restored=true
2445	elif [[ $archive_system = ut ]]
2446	then
2447	if [[ $files_for_pes = false ]]
2448	then
2449	cp $UT/${frelin[$i]} .
2450	else
2451	(( inode = 0 ))
2452	while (( inode < nodes ))
2453	do
2454	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2455	(( inode = inode + 1 ))
2456	done
2457	fi
2458	file_restored=true
2459	else
2460	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2461	locat=rearchive
2462	exit
2463	fi
2464
2465	if [[ $file_restored = true ]]
2466	then
2467
2468	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2469	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2470	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2471	if [[ $files_for_pes = false ]]
2472	then
2473	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2474	else
2475	mkdir $tmp_data_catalog/${frelin[$i]}
2476	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2477	fi
2478	got_tmp[$i]=true
2479
2480	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2481	mv ${frelin[$i]} ${localin[$i]}
2482
2483	fi
2484	fi
2485
2486
2487	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2488	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2489	then
2490
2491	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2492	then
2493
2494	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2495	printf "\n file will be provided for $numprocs processors"
2496	mkdir ${localin[$i]}
2497	ival=$numprocs
2498	(( ii = 0 ))
2499	while (( ii <= ival-1 ))
2500	do
2501	if (( ii < 10 ))
2502	then
2503	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2504	elif (( ii < 100 ))
2505	then
2506	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2507	elif (( ii < 1000 ))
2508	then
2509	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2510	else
2511	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2512	fi
2513	(( ii = ii + 1 ))
2514	done
2515
2516	else
2517
2518	if [[ $files_for_pes = true ]]
2519	then
2520
2521	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2522	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2523	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2524	# PER MOVE UMBENANNT WERDEN
2525	printf "\n providing $numprocs files for the respective processors"
2526	mkdir ${localin[$i]}
2527	cp -r ${absnamein[$i]}/* ${localin[$i]}
2528
2529	else
2530	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2531	cp ${absnamein[$i]} ${localin[$i]}
2532	fi
2533	fi
2534	fi
2535
2536	done
2537	if (( i != 0 ))
2538	then
2539	printf "\n$striche\n *** all INPUT-files provided \n"
2540	fi
2541
2542
2543	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2544	# LESEN VON PALM)
2545	cat > ENVPAR << %%END%%
2546	&envpar run_identifier = '$fname', host = '$localhost',
2547	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2548	maximum_cpu_time_allowed = ${cpumax}.,
2549	revision = '$global_revision' /
2550
2551	%%END%%
2552
2553
2554	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2555	(( i = 0 ))
2556	while (( i < iic ))
2557	do
2558	(( i = i + 1 ))
2559	if (( i == 1 ))
2560	then
2561	printf "\n\n *** execution of INPUT-commands:\n$striche"
2562	fi
2563	printf "\n >>> ${in_command[$i]}"
2564	eval ${in_command[$i]}
2565	if (( i == iic ))
2566	then
2567	printf "\n$striche\n"
2568	fi
2569	done
2570
2571
2572	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2573	cpurest=${cpumax}.
2574
2575
2576	# PROGRAMMSTART
2577	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2578	PATH=$PATH:$TEMPDIR
2579
2580	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2581	then
2582	if [[ "$ENVIRONMENT" = BATCH ]]
2583	then
2584	printf "\n +++ debug is allowed in interactive mode only"
2585	locat=debug
2586	exit
2587	fi
2588	if [[ $localhost = decalpha ]]
2589	then
2590	dxladebug a.out
2591	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2592	then
2593
2594	# SETUP THE IBM MPI ENVIRONMENT
2595	export MP_SHARED_MEMORY=yes
2596	export AIXTHREADS_SCOPE=S
2597	export OMP_NUM_THREADS=$threads_per_task
2598	export AUTHSTATE=files
2599	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2600
2601	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2602	export MP_ADAPTER_USE=shared
2603	export MP_CPU_USE=multiple
2604	export MP_TIMEOUT=1200
2605
2606	unset MP_TASK_AFFINITY
2607
2608	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2609	#(( ii = 1 ))
2610	#while (( ii <= $numprocs ))
2611	#do
2612	# echo $localhost_realname >> hostfile
2613	# (( ii = ii + 1 ))
2614	#done
2615	#export MP_HOSTFILE=hostfile
2616
2617	if [[ "$LOADLBATCH" = yes ]]
2618	then
2619	totalview poe a.out $ROPTS
2620	else
2621	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2622	export TVDSVRLAUNCHCMD=ssh
2623	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2624	fi
2625	else
2626	printf "\n +++ no debug available on \"$localhost\" "
2627	printf "\n or not implemented in mrun so far"
2628	locat=debug
2629	exit
2630	fi
2631	else
2632	if [[ -n $numprocs ]]
2633	then
2634
2635	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2636	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2637	then
2638	# SETUP THE IBM MPI ENVIRONMENT
2639	export MP_SHARED_MEMORY=yes
2640	export AIXTHREAD_SCOPE=S
2641	export OMP_NUM_THREADS=$threads_per_task
2642	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2643	export AUTHSTATE=files
2644	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2645	# export MP_PRINTENV=yes
2646
2647	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2648	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2649	export MP_WAIT_MODE=poll
2650	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2651	# export MP_EAGER_LIMIT=65535
2652
2653	# # TESTWEISE FUER TURBOMPI (JAN 05)
2654	# export MPJ_MTAB=128
2655	# export MPJ_ALLTOALL=1
2656	# export MPJ_ALLTOALLV=1
2657
2658	if [[ "$LOADLBATCH" = yes ]]
2659	then
2660	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2661	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2662	then
2663	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2664	else
2665	poe ./a.out $ROPTS
2666	fi
2667	else
2668	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2669	then
2670	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2671	elif [[ $localhost = ibmy ]]
2672	then
2673	if [[ -f $hostfile ]]
2674	then
2675	cp $hostfile hostfile
2676	else
2677	(( ii = 1 ))
2678	while (( ii <= $numprocs ))
2679	do
2680	echo $localhost_realname >> hostfile
2681	(( ii = ii + 1 ))
2682	done
2683	fi
2684	export MP_HOSTFILE=hostfile
2685	./a.out -procs $tasks_per_node $ROPTS
2686	else
2687	if [[ "$host_file" = "" ]]
2688	then
2689	printf "\n +++ no hostfile given in configuration file"
2690	locat=config_file
2691	exit
2692	else
2693	eval host_file=$host_file
2694	fi
2695	export MP_HOSTFILE=$host_file
2696	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2697	fi
2698	fi
2699	elif [[ $host = nech \|\| $host = neck ]]
2700	then
2701	(( ii = nodes ))
2702	if [[ $ii = 1 ]]
2703	then
2704	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2705	export MPIPROGINF=YES
2706	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2707	echo "*** execution on single node with mpirun"
2708	mpirun -np $numprocs ./a.out $ROPTS
2709	else
2710	(( i = 0 ))
2711	while (( i < ii ))
2712	do
2713	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2714	(( i = i + 1 ))
2715	done
2716
2717	echo "#!/bin/sh" > mpi_exec_shell
2718	echo " " >> mpi_exec_shell
2719	echo "set -u" >> mpi_exec_shell
2720	echo "F_ERRCNT=0" >> mpi_exec_shell
2721	echo "MPIPROGINV=YES" >> mpi_exec_shell
2722	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2723	echo "cpurest=$cpurest" >> mpi_exec_shell
2724	echo "fname=$fname" >> mpi_exec_shell
2725	echo "localhost=$localhost" >> mpi_exec_shell
2726	echo "return_addres=$return_addres" >> mpi_exec_shell
2727	echo "return_username=$return_username" >> mpi_exec_shell
2728	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2729	echo "write_binary=$write_binary" >> mpi_exec_shell
2730	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2731	echo " " >> mpi_exec_shell
2732	echo "export F_ERRCNT" >> mpi_exec_shell
2733	echo "export MPIPROGINV" >> mpi_exec_shell
2734	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2735	echo "export cpurest" >> mpi_exec_shell
2736	echo "export fname" >> mpi_exec_shell
2737	echo "export localhost" >> mpi_exec_shell
2738	echo "export return_addres" >> mpi_exec_shell
2739	echo "export return_username" >> mpi_exec_shell
2740	echo "export tasks_per_node" >> mpi_exec_shell
2741	echo "export write_binary" >> mpi_exec_shell
2742	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2743	echo " " >> mpi_exec_shell
2744	echo "exec ./a.out" >> mpi_exec_shell
2745
2746	chmod u+x mpi_exec_shell
2747	export MPIPROGINF=YES
2748	mpirun -f multinode_config &
2749	wait
2750
2751	fi
2752	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2753	then
2754
2755	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2756	# DOES NOT EXIST
2757	if [[ $host != lcsgih && $host != lcsgib ]]
2758	then
2759	if [[ -f $hostfile ]]
2760	then
2761	cp $hostfile hostfile
2762	else
2763	(( ii = 1 ))
2764	while (( ii <= $numprocs / $threads_per_task ))
2765	do
2766	echo $localhost_realname >> hostfile
2767	(( ii = ii + 1 ))
2768	done
2769	fi
2770	eval zeile=\"`head -n $ii hostfile`\"
2771	printf "\n *** running on: $zeile"
2772	fi
2773
2774	(( ii = $numprocs / $threads_per_task ))
2775	export OMP_NUM_THREADS=$threads_per_task
2776	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2777	if [[ $threads_per_task != 1 ]]
2778	then
2779	printf "\n threads per task: $threads_per_task"
2780	fi
2781	if [[ $run_coupled_model = false ]]
2782	then
2783	printf "\n\n"
2784	if [[ $host = lcsgih \|\| $host = lcsgib ]]
2785	then
2786	echo " --- Content of \$PBS_NODEFILE:"
2787	cat $PBS_NODEFILE
2788	echo " --- end content"
2789	mpirun -machinefile $PBS_NODEFILE -np $ii a.out $ROPTS
2790	elif [[ $host = lcxt4 ]]
2791	then
2792	aprun -n $ii -N $tasks_per_node a.out $ROPTS
2793	else
2794	echo "no_coupling" > runfile_atmos
2795	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
2796	fi
2797	else
2798	(( iii = ii / 2 ))
2799	echo "atmosphere_to_ocean" > runfile_atmos
2800	echo "ocean_to_atmosphere" > runfile_ocean
2801
2802	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2803	printf "\n\n"
2804
2805	if [[ $host == lcxt4 ]]
2806	then
2807	aprun -n $iii -N $tasks_per_node a.out < runfile_atmos $ROPTS &
2808	aprun -n $iii -N $tasks_per_node a.out < runfile_ocean $ROPTS &
2809	else
2810
2811	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
2812	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_atmos &
2813	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_ocean &
2814	# mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2815	# mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2816	fi
2817	wait
2818	fi
2819
2820	# if [[ $scirocco = true ]]
2821	# then
2822	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2823	# else
2824	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2825	# fi
2826
2827	elif [[ $host = decalpha ]]
2828	then
2829	dmpirun -np $numprocs a.out $ROPTS
2830	elif [[ $host = lctit ]]
2831	then
2832	export runfile=runfile.$kennung
2833
2834	echo "cd $PWD" > $runfile
2835	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2836	echo "export cpurest=$cpurest" >> $runfile
2837	echo "export fname=$fname" >> $runfile
2838	echo "export localhost=$localhost" >> $runfile
2839	echo "export return_addres=$return_addres" >> $runfile
2840	echo "export return_username=$return_username" >> $runfile
2841	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2842	echo "export write_binary=$write_binary" >> $runfile
2843	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2844	echo "./a.out" >> $runfile
2845	chmod u+x $runfile
2846
2847	if [[ "$QUEUE" = interactive ]]
2848	then
2849	mpirun -np $numprocs a.out $ROPTS
2850	else
2851	(( mem_tsubame = $memory / 1024.0 ))
2852	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
2853	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2854	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
2855	fi
2856
2857	rm $runfile
2858	else
2859	mpprun -n $numprocs a.out $ROPTS
2860	fi
2861	[[ $? != 0 ]] && execution_error=true
2862
2863
2864	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2865	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2866	then
2867	apprentice
2868	fi
2869	else
2870	a.out $ROPTS
2871	fi
2872	fi
2873	if [[ $? != 0 \|\| $execution_error = true ]]
2874	then
2875
2876	# ABBRUCH BEI LAUFZEITFEHLER
2877	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2878	printf "\n +++ runtime error occured"
2879	locat=execution
2880	exit
2881	else
2882	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2883	printf "\n$striche\n *** execution finished \n"
2884	fi
2885
2886
2887
2888	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2889	(( i = 0 ))
2890	while (( i < ioc ))
2891	do
2892	(( i = i + 1 ))
2893	if (( i == 1 ))
2894	then
2895	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2896	fi
2897	printf "\n >>> ${out_command[$i]}"
2898	eval ${out_command[$i]}
2899	if (( i == ioc ))
2900	then
2901	printf "\n$striche\n"
2902	fi
2903	done
2904
2905
2906	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2907	if [[ $do_trace = true ]]
2908	then
2909	printf "\n\n"
2910	ls -al
2911	fi
2912
2913
2914
2915	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2916	(( i = 0 ))
2917	while (( i < iout ))
2918	do
2919	(( i = i + 1 ))
2920	if (( i == 1 ))
2921	then
2922	printf "\n\n *** saving OUTPUT-files:\n$striche"
2923	fi
2924
2925	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2926	files_for_pes=false; filetyp=file
2927	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2928	then
2929	files_for_pes=true; filetyp=directory
2930	actionout[$i]=""
2931	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2932	then
2933	actionout[$i]=""
2934	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2935	then
2936	files_for_pes=true; filetyp=directory
2937	actionout[$i]="ar"
2938	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2939	then
2940	actionout[$i]="ar"
2941	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2942	then
2943	files_for_pes=true; filetyp=directory
2944	actionout[$i]="fl"
2945	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2946	then
2947	actionout[$i]="fl"
2948	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2949	then
2950	files_for_pes=true; filetyp=directory
2951	actionout[$i]="tr"
2952	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2953	then
2954	actionout[$i]="tr"
2955	fi
2956
2957	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2958	then
2959	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2960	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2961	then
2962	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
2963	else
2964
2965
2966	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2967	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2968	# REMOTE-RECHNUNGEN
2969	if [[ "${actionout[$i]}" = tr ]]
2970	then
2971	if [[ $localhost != $fromhost ]]
2972	then
2973	if [[ $files_for_pes = false ]]
2974	then
2975	cps=""
2976	cst=""
2977	else
2978	cps=-c
2979	cst="/"
2980	fi
2981	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2982	then
2983
2984	# TRANSFER IN EIGENSTAENDIGEM JOB
2985	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
2986	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
2987	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
2988	if [[ $files_for_pes = false ]]
2989	then
2990	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
2991	else
2992	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
2993	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
2994	fi
2995
2996	echo "set -x" > transfer_${localout[$i]}
2997	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
2998
2999	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3000	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3001	printf "\n or higher cycle\n"
3002	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3003
3004	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3005
3006	if [[ $localhost = nech ]]
3007	then
3008	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3009	else
3010	if [[ "$LOGNAME" = b323013 ]]
3011	then
3012	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3013	else
3014	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3015	fi
3016	fi
3017
3018	else
3019
3020	# TRANSFER INNERHALB DIESES JOBS
3021	transfer_failed=false
3022	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3023	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3024	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3025	[[ $? != 0 ]] && transfer_failed=true
3026
3027	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3028	# LOKALER MASCHINE ANLEGEN
3029	if [[ $transfer_failed = true ]]
3030	then
3031	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3032	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3033
3034	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3035	# ANLEGEN.
3036	eval local_catalog=${pathout[$i]}
3037	if [[ ! -d $local_catalog ]]
3038	then
3039	printf " *** local directory does not exist. Trying to create:\n"
3040	printf " $local_catalog \n"
3041	mkdir -p $local_catalog
3042	fi
3043	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3044	transfer_problems=true
3045	fi
3046	fi
3047	else
3048
3049	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3050	actionout[$i]=""
3051	fi
3052	fi
3053
3054
3055	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3056	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3057	# REMOTE-RECHNUNGEN
3058	if [[ "${actionout[$i]}" = tra ]]
3059	then
3060	if [[ $localhost != $fromhost ]]
3061	then
3062	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3063	then
3064
3065	# TRANSFER IN EIGENSTAENDIGEM JOB
3066	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3067	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3068	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3069	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3070
3071	echo "set -x" > transfer_${localout[$i]}
3072	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3073
3074	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3075	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3076	printf "\n or higher cycle\n"
3077	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3078
3079	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3080
3081	if [[ $localhost = nech ]]
3082	then
3083	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3084	else
3085	if [[ $LOGNAME = b323013 ]]
3086	then
3087	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3088	else
3089	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3090	fi
3091	fi
3092
3093	else
3094
3095	# TRANSFER INNERHALB DIESES JOBS
3096	transfer_failed=false
3097	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3098	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3099	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3100	[[ $? != 0 ]] && transfer_failed=true
3101
3102	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3103	# LOKALER MASCHINE ANLEGEN
3104	if [[ $transfer_failed = true ]]
3105	then
3106	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3107	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3108
3109	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3110	# ANLEGEN
3111	eval local_catalog=${pathout[$i]}
3112	if [[ ! -d $local_catalog ]]
3113	then
3114	printf " *** local directory does not exist. Trying to create:\n"
3115	printf " $local_catalog \n"
3116	mkdir -p $local_catalog
3117	fi
3118
3119	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3120	transfer_problems=true
3121	fi
3122	fi
3123	else
3124
3125	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3126	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3127	actionout[$i]=a
3128	fi
3129	fi
3130
3131
3132	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3133	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3134	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3135	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3136	if [[ "${actionout[$i]}" = fl ]]
3137	then
3138	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3139	chmod g+rx $tmp_data_catalog
3140	if [[ $files_for_pes = false ]]
3141	then
3142	printf "\n >>> OUTPUT: ${localout[$i]} to"
3143	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3144	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3145	else
3146	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3147	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3148	mkdir $tmp_data_catalog/${frelout[$i]}
3149	cd ${localout[$i]}
3150	for file in $(ls *)
3151	do
3152	ln -f $file $tmp_data_catalog/${frelout[$i]}
3153	done
3154	cd $TEMPDIR
3155	fi
3156
3157
3158	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3159	if [[ $store_on_archive_system = true ]]
3160	then
3161
3162	if [[ $archive_system = asterix ]]
3163	then
3164	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3165	if [[ $files_for_pes = false ]]
3166	then
3167	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3168	else
3169	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3170	fi
3171	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3172	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3173	echo "then" >> archive_${frelout[$i]}
3174	echo " do_stageout=false" >> archive_${frelout[$i]}
3175	echo "else" >> archive_${frelout[$i]}
3176	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3177	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3178	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3179	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3180	if [[ $files_for_pes = false ]]
3181	then
3182	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3183	else
3184	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3185	fi
3186	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3187	echo "fi" >> archive_${frelout[$i]}
3188	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3189	elif [[ $archive_system = DMF ]]
3190	then
3191	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3192	if [[ $files_for_pes = false ]]
3193	then
3194	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3195	locat=DMF
3196	exit
3197	else
3198	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3199	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3200	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3201	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3202	fi
3203	elif [[ $archive_system = tivoli ]]
3204	then
3205	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3206	if [[ $files_for_pes = false ]]
3207	then
3208	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3209	echo "set -x" >> archive_${frelout[$i]}
3210	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3211	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3212	else
3213
3214	echo "set -x" >> archive_${frelout[$i]}
3215	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3216	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3217	cd $tmp_data_catalog
3218	all_files=`ls -1 ${frelout[$i]}/*`
3219	cd - > /dev/null
3220	(( inode = 0 ))
3221	(( tp1 = tasks_per_node + 1 ))
3222	while (( inode < nodes ))
3223	do
3224	# echo "*** all_files = \"$all_files\" "
3225	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3226	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3227	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3228	# echo "*** files = \"$files\" "
3229	# echo "*** all_files = \"$all_files\" "
3230	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3231	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3232	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3233	(( inode = inode + 1 ))
3234	done
3235	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3236	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3237	fi
3238	elif [[ $archive_system = ut ]]
3239	then
3240	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3241	if [[ $files_for_pes = false ]]
3242	then
3243	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3244	echo "set -x" >> archive_${frelout[$i]}
3245	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3246	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3247	else
3248
3249	echo "set -x" >> archive_${frelout[$i]}
3250	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3251	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3252	cd $tmp_data_catalog
3253	all_files=`ls -1 ${frelout[$i]}/*`
3254	cd - > /dev/null
3255	(( inode = 0 ))
3256	(( tp1 = tasks_per_node + 1 ))
3257	while (( inode < nodes ))
3258	do
3259	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3260	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3261	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3262	(( inode = inode + 1 ))
3263	done
3264	fi
3265	elif [[ $archive_system = none ]]
3266	then
3267	printf " +++ archiving on $localhost not available!\n"
3268	fi
3269
3270	if [[ $archive_system != none ]]
3271	then
3272	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3273	then
3274	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3275	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3276	elif [[ $localhost = nech ]]
3277	then
3278	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3279	fi
3280	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3281	fi
3282	else
3283	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3284	fi
3285
3286
3287	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3288	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3289	if [[ $files_for_pes = false ]]
3290	then
3291	cat /dev/null > ${pathout[$i]}
3292	else
3293	mkdir -p ${pathout[$i]}
3294	fi
3295
3296	fi
3297
3298
3299	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3300	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3301	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3302	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3303	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3304	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3305	if [[ "${actionout[$i]}" = ar ]]
3306	then
3307	if [[ $files_for_pes = false ]]
3308	then
3309	printf "\n >>> OUTPUT: ${localout[$i]} to"
3310	printf "\n ${pathout[$i]}"
3311	printf "\n File will be copied to archive-system ($archive_system) !\n"
3312	else
3313	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3314	printf "\n ${pathout[$i]}"
3315	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3316	fi
3317	mv ${localout[$i]} ${frelout[$i]}
3318
3319	file_saved=false
3320
3321	if [[ $archive_system = asterix ]]
3322	then
3323	do_stageout=true
3324	(( stageout_anz = 0 ))
3325	while [[ $do_stageout = true ]]
3326	do
3327	if [[ $files_for_pes = false ]]
3328	then
3329	stageout ${frelout[$i]} > STAGE_OUTPUT
3330	else
3331	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3332	fi
3333	cat STAGE_OUTPUT
3334	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3335	then
3336	file_saved=true
3337	do_stageout=false
3338	else
3339	if [[ $files_for_pes = false ]]
3340	then
3341	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3342	else
3343	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3344	fi
3345	(( stageout_anz = stageout_anz + 1 ))
3346	if (( stageout_anz == 10 ))
3347	then
3348	printf "\n +++ stoped after 10 unsuccessful tries!"
3349	archive_save=false
3350	do_stageout=false
3351	else
3352	printf "\n *** new try to store on archive after 15 min:"
3353	sleep 900
3354	fi
3355	fi
3356	done
3357	elif [[ $archive_system = DMF ]]
3358	then
3359	if [[ $files_for_pes = false ]]
3360	then
3361	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3362	locat=DMF
3363	exit
3364	else
3365	rm -rf $ARCHIVE/${frelout[$i]}
3366	cp -r ${frelout[$i]} $ARCHIVE
3367	fi
3368	file_saved=true
3369	elif [[ $archive_system = tivoli ]]
3370	then
3371	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3372	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3373	# GELEGT WERDEN
3374	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3375	chmod g+rx $tmp_data_catalog
3376	if [[ $files_for_pes = false ]]
3377	then
3378	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3379	else
3380	mkdir $tmp_data_catalog/${frelout[$i]}
3381	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3382	fi
3383
3384	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3385	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3386	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3387	if [[ $files_for_pes = false ]]
3388	then
3389	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3390	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3391	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3392	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3393	else
3394	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3395	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3396	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3397	fi
3398
3399	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3400	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3401	file_saved=true
3402
3403	elif [[ $archive_system = ut ]]
3404	then
3405	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3406	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3407	# GELEGT WERDEN
3408	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3409	chmod g+rx $tmp_data_catalog
3410	if [[ $files_for_pes = false ]]
3411	then
3412	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3413	else
3414	mkdir $tmp_data_catalog/${frelout[$i]}
3415	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3416	fi
3417
3418	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3419	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3420	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3421	if [[ $files_for_pes = false ]]
3422	then
3423	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3424	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3425	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3426	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3427	else
3428	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3429	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3430	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3431	fi
3432
3433	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3434	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3435	file_saved=true
3436
3437	else
3438	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3439	archive_save=false
3440	fi
3441	if [[ $file_saved = true ]]
3442	then
3443	if [[ $files_for_pes = false ]]
3444	then
3445	cat /dev/null > ${pathout[$i]}
3446	else
3447	mkdir -p ${pathout[$i]}
3448	fi
3449	fi
3450	fi
3451
3452	# APPEND AUF LOKALER MASCHINE
3453	if [[ "${actionout[$i]}" = "a" ]]
3454	then
3455	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3456	cat ${localout[$i]} >> ${pathout[$i]}
3457	fi
3458
3459	# KOPIEREN AUF LOKALER MASCHINE
3460	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3461	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3462	then
3463
3464	# KOPIEREN AUF EINPROZESSORMASCHINE
3465	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3466	then
3467	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3468	if [[ $link_local_output = true ]]
3469	then
3470	printf " using ln -f\n"
3471	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3472	fi
3473	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3474	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3475	then
3476	if [[ $link_local_output = true ]]
3477	then
3478	printf " ln failed, using cp...\n"
3479	fi
3480	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3481	fi
3482	else
3483	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3484	if [[ $link_local_output = true ]]
3485	then
3486	printf " using ln -f\n"
3487	ln -f ${localout[$i]} ${pathout[$i]}
3488	fi
3489	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3490	if [[ ! -f "${pathout[$i]}" ]]
3491	then
3492	if [[ $link_local_output = true ]]
3493	then
3494	printf " ln failed, using cp...\n"
3495	fi
3496	cp ${localout[$i]} ${pathout[$i]}
3497	fi
3498	fi
3499
3500	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3501	then
3502
3503	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3504	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3505	# WIRD DANN KOPIERT
3506	# PER MOVE UMBENANNT WERDEN
3507	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3508	if [[ $link_local_output = true ]]
3509	then
3510	printf " using ln -f\n"
3511	mkdir ${pathout[$i]}
3512	cd ${localout[$i]}
3513	for file in $(ls *)
3514	do
3515	ln -f $file ${pathout[$i]}
3516	done
3517	cd $TEMPDIR
3518	fi
3519	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
3520	if [[ ! -f "${pathout[$i]}/_0000" ]]
3521	then
3522	if [[ $link_local_output = true ]]
3523	then
3524	printf " ln failed for .../_0000, using cp...\n"
3525	fi
3526	cp -r ${localout[$i]} ${pathout[$i]}
3527	fi
3528
3529	fi
3530	fi
3531	done
3532	if (( i != 0 ))
3533	then
3534	if [[ $transfer_problems = true ]]
3535	then
3536	printf "\n$striche\n *** OUTPUT-files saved"
3537	printf "\n +++ WARNING: some data transfers failed! \n"
3538	else
3539	printf "\n$striche\n *** all OUTPUT-files saved \n"
3540	fi
3541	fi
3542
3543
3544	# EVENTUELL FOLGEJOB STARTEN
3545	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3546	if [[ -f CONTINUE_RUN ]]
3547	then
3548
3549	if [[ $archive_save = true ]]
3550	then
3551
3552	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3553	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3554	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3555	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3556	# HANDEN
3557	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3558	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3559	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3560	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3561	then
3562	mc=`echo $mc \| sed 's/#/f/g'`
3563	fi
3564
3565
3566	# JOB STARTEN
3567	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3568	echo " $mc"
3569	printf "\n$striche\n"
3570	if [[ $localhost != $fromhost ]]
3571	then
3572
3573	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3574	then
3575	echo "*** ssh will be used to initiate restart-runs!"
3576	echo " return_addres=\"$return_addres\" "
3577	echo " return_username=\"$return_username\" "
3578	if [[ $return_addres = 172.20.25.41 ]]
3579	then
3580	# WORKAROUND AUF SCIROCCO AM TIT
3581	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3582	else
3583	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3584	fi
3585	else
3586	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3587	locat=restart; exit
3588	fi
3589
3590	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3591	# DER AKTUELLE JOB ENDET
3592	sleep 30
3593
3594	else
3595
3596	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3597	# RUFEN WERDEN, AUSSER AUF lcfimm
3598	cd $LOCAL_PWD
3599	if [[ $localhost = lcfimm ]]
3600	then
3601	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3602	else
3603	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3604	fi
3605	cd - > /dev/null
3606	fi
3607	printf "\n$striche\n *** restart-run initiated \n"
3608
3609
3610	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3611	# GEHOLT WORDEN SIND, LOESCHEN
3612	(( i = 0 ))
3613	while (( i < iin ))
3614	do
3615	(( i = i + 1 ))
3616	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3617	then
3618	rm -r $tmp_data_catalog/${frelin[$i]}
3619	fi
3620	done
3621
3622	else
3623
3624	printf "\n +++ no restart-run possible, since errors occured"
3625	printf "\n during the archive process"
3626	fi
3627
3628	fi
3629
3630
3631
3632	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3633	if [[ "$email_notification" != "" ]]
3634	then
3635
3636	if [[ $localhost != $fromhost ]]
3637	then
3638	if [[ -f CONTINUE_RUN ]]
3639	then
3640	echo "PALM restart run necessary" > email_text
3641	echo "description header of actual run:" >> email_text
3642	cat CONTINUE_RUN >> email_text
3643	echo "mrun-command to restart:" >> email_text
3644	echo "$mc" >> email_text
3645	else
3646	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3647	fi
3648	mail $email_notification < email_text
3649	printf "\n *** email notification sent to \"$email_notification\" "
3650	fi
3651	fi
3652
3653
3654
3655	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3656	cd $HOME
3657	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3658
3659	else
3660
3661
3662	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3663	# CHENDE AKTIONEN DURCHGEFUEHRT
3664
3665	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3666	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3667	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3668	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3669	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
3670	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3671	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3672	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3673	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3674	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3675	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3676	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3677	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3678	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3679	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3680	if [[ $use_openmp = true ]]
3681	then
3682	mrun_com=${mrun_com}" -O"
3683	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3684	else
3685	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3686	fi
3687	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3688	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3689	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3690	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3691	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
3692	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3693	if [[ $do_remote = true ]]
3694	then
3695	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3696	fi
3697
3698
3699	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3700	jobfile=jobfile.$RANDOM
3701
3702
3703	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3704	echo "mkdir $TEMPDIR" >> $jobfile
3705	echo "cd $TEMPDIR" >> $jobfile
3706
3707
3708	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3709	if [[ $do_trace = true ]]
3710	then
3711	echo "set -x" >> $jobfile
3712	else
3713	echo "set +vx" >> $jobfile
3714	fi
3715
3716
3717	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3718	# SOWIE GEGEBENENFALLS DES MAKEFILES
3719	if [[ $do_compile = true ]]
3720	then
3721
3722	source_catalog=SOURCES_FOR_RUN_$fname
3723
3724	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3725	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3726	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3727	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3728	echo "export SOURCES_COMPLETE=true" >> $jobfile
3729	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3730
3731	for filename in $source_list
3732	do
3733	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3734	echo "cat > $filename << \"%END%\"" >> $jobfile
3735	cat $source_catalog/$filename >> $jobfile
3736	echo " " >> $jobfile
3737	echo "%END%" >> $jobfile
3738	echo " " >> $jobfile
3739	done
3740
3741	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3742	echo "cat > Makefile << \"%END%\"" >> $jobfile
3743	cat $source_catalog/Makefile >> $jobfile
3744	echo " " >> $jobfile
3745	echo "%END%" >> $jobfile
3746	echo " " >> $jobfile
3747
3748	echo "cd - > /dev/null" >> $jobfile
3749
3750	fi
3751
3752
3753	# ABSPEICHERN DER KONFIGURATIONSDATEI
3754	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3755	echo "cat > $config_file << \"%END%\"" >> $jobfile
3756	cat $config_file >> $jobfile
3757	echo "%END%" >> $jobfile
3758	echo " " >> $jobfile
3759
3760
3761	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3762	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3763	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3764	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3765	echo "%END%" >> $jobfile
3766	if [[ $host = lctit ]]
3767	then
3768	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3769	echo "mv mrun_new $mrun_script_name" >> $jobfile
3770	fi
3771	echo "chmod u+x $mrun_script_name" >> $jobfile
3772	echo "execute_mrun=true" >> $jobfile
3773	echo " " >> $jobfile
3774
3775	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3776	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3777	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3778	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3779	if [[ $do_remote = true ]]
3780	then
3781	(( i = 0 ))
3782	while (( i < iin ))
3783	do
3784	(( i = i + 1 ))
3785	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3786	if [[ "${transin[$i]}" = job ]]
3787	then
3788	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3789	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3790	echo " " >> $jobfile
3791	echo "%END%" >> $jobfile
3792	else
3793	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3794	fi
3795
3796	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3797	echo "if [[ \$? = 1 ]]" >> $jobfile
3798	echo "then" >> $jobfile
3799	echo " echo \" \" " >> $jobfile
3800	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3801	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3802	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3803	echo " execute_mrun=false" >> $jobfile
3804	echo "fi" >> $jobfile
3805	done
3806	fi
3807
3808	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3809	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3810	echo "LOCAL_PWD=$working_directory" >> $jobfile
3811	echo "export LOCAL_PWD" >> $jobfile
3812
3813	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3814	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3815	echo "export LOCAL_MRUN_PATH" >> $jobfile
3816
3817	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3818	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3819	then
3820	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3821	fi
3822
3823	# MRUN AUF ZIELRECHNER AUFRUFEN
3824	echo "set -x" >> $jobfile
3825	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3826
3827	echo 'ls -al; echo `pwd`' >> $jobfile
3828	echo "cd \$HOME" >> $jobfile
3829	echo "rm -rf $TEMPDIR" >> $jobfile
3830
3831
3832
3833
3834	# JOB PER SUBJOB STARTEN
3835	if [[ $silent = false ]]
3836	then
3837	printf "\n "
3838	else
3839	printf "\n\n"
3840	fi
3841
3842	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
3843	rm -rf $jobfile
3844
3845
3846	fi # ENDE REMOTE-TEIL
3847
3848
3849
3850	# ENDE DER PROZEDUR

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