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source: palm/trunk/SCRIPTS/mrun @ 160

Last change on this file since 160 was 149, checked in by letzel, 17 years ago

Modifications of mrun concerning hard links:

link of restart files with long file name possible
If environment variable link_local_output is set to true, mrun tries "ln -f" on local output and resorts to "cp" or "cp -r" on error

Property svn:keywords set to Rev

File size: 141.7 KB

Line
1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142
143	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
144
145	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
146	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
147	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
148
149	AddFilenames=""
150	additional_conditions=""
151	add_source_path=""
152	afname=""
153	archive_save=true
154	archive_system=none
155	compiler_name=""
156	cond1=""
157	cond2=""
158	config_file=.mrun.config
159	cpp_opts=""
160	cpp_options=""
161	cpumax=0
162	cpurest=0
163	delete_temporary_catalog=true
164	do_batch=false
165	do_compile=true
166	do_remote=false
167	do_stagein=true
168	do_stageout=true
169	do_trace=false
170	email_notification=""
171	exclude=""
172	executable=""
173	execution_error=false
174	fimm=false
175	fname=test
176	fromhost=""
177	global_revision=""
178	group_number=none
179	host=""
180	host_file=""
181	hp=""
182	ignore_archive_error=false
183	input_list=""
184	interpreted_config_file=""
185	job_on_file=""
186	keep_data_from_previous_run=false
187	link_local_output=false
188	localhost_realname=$(hostname)
189	local_compile=false
190	locat=normal
191	mainprog=""
192	makefile=""
193	mc=$0
194	while [[ $(echo $mc \| grep -c "/") != 0 ]]
195	do
196	mc=`echo $mc \| cut -f2- -d"/"`
197	done
198	module_files=""
199	mrun_script_name=$mc
200	netcdf_inc=""
201	netcdf_lib=""
202	netcdf_support=false
203	node_usage=default
204	numprocs=""
205	OOPT=""
206	openmp=false
207	output_list=""
208	package_list=""
209	punkte="..........................................................."
210	queue=none
211	read_from_config=""
212	restart_run=false
213	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
214	if [[ $return_addres = 130.75.105.158 ]]
215	then
216	return_addres=172.20.25.41
217	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
218	fi
219	# if [[ $return_addres = 210.117.65.1 ]]
220	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
221	# then
222	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
223	# fi
224	return_password=""
225	return_username=$LOGNAME
226	remotecall=false
227	remote_username=""
228	run_coupled_model=false
229	run_mode=""
230	scirocco=false
231	store_on_archive_system=true
232	striche=" ----------------------------------------------------------------------------"
233	silent=false
234	source_list=""
235	source_path=SOURCE
236	tasks_per_node=""
237	threads_per_task=1
238	tmpcreate=false
239	tmp_data_catalog=""
240	transfer_problems=false
241	usern=$LOGNAME
242	working_directory=`pwd`
243	TOPT=""
244	XOPT=""
245	zeit=$( date \| cut -c 12-19 )
246
247	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
248	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
249
250	typeset -R30 calltime
251	typeset -L20 spalte1
252	typeset -L40 spalte2
253	typeset -L60 spalte3
254	typeset -L35 string1=`date`
255	typeset -L12 string2=$usern
256	typeset -L12 string3=$localhost_realname
257	typeset -L12 string4
258	typeset -L12 string5
259	typeset -L30 version="MRUN 2.0 Rev$Rev: 149 $"
260
261
262
263	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
264	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
265
266	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
267	# EXPORTIERT WERDEN
268	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
269	export group_number input_list memory numprocs output_list queue run_mode
270
271
272
273	# FEHLERBEHANDLUNG
274	# BEI EXIT:
275	trap 'rm -rf $working_directory/tmp_mrun
276	if [[ $locat != localhost ]]
277	then
278	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
279	# then
280	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
281	#MRUN-calls on $localhost
282	#
283	#date and time user localhost remotehost termination mrun-command
284	#--------------------------------------------------------------------------------------------------------------------
285	#%STATEND%
286	# chmod 666 ${mrun_path}/statistik/mrun_statistik
287	# fi
288	#
289	# # EINTRAG IN DIE STATISTIK-DATEI
290	# string4=$host
291	# string5=$locat
292	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
293	# then
294	# if [[ $do_batch = true ]]
295	# then
296	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
297	# else
298	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
299	# fi
300	# fi
301	echo " " > /dev/null
302	fi
303
304	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
305	then
306
307	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
308	(( i = 0 ))
309	while (( i < iec ))
310	do
311	(( i = i + 1 ))
312	printf "\n *** Execution of ERROR-command:\n"
313	printf " >>> ${err_command[$i]}\n"
314	eval ${err_command[$i]}
315	done
316	if [[ -n $interpreted_config_file ]] then
317	rm -rf $interpreted_config_file
318	fi
319	if [[ -n .mrun_environment ]] then
320	rm -rf .mrun_environment
321	fi
322	if [[ $tmpcreate = true ]]
323	then
324	printf "\n *** Contents of \"$TEMPDIR\":\n"
325	ls -al; cd
326	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
327	fi
328	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
329	then
330	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
331	fi
332	printf "\n\n+++ MRUN killed \n\n"
333	elif [[ $locat != control_c ]]
334	then
335	printf "\n\n --> all actions finished\n\n"
336	printf " Bye, bye $usern !!\n\n"
337	fi' exit
338
339
340	# BEI TERMINAL-BREAK:
341	trap 'rm -rf $working_directory/tmp_mrun
342	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
343	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
344	then
345	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
346	fi
347	printf "\n+++ MRUN killed by \"^C\" \n\n"
348	locat=control_c
349	exit
350	' 2
351
352
353	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
354	# BEEN SET
355	if [[ "$PALM_BIN" = "" ]]
356	then
357	printf "\n +++ environment variable PALM_BIN has not been set"
358	printf "\n please set it to the directory where the PALM scripts are located"
359	locat=palm_bin; exit
360	fi
361
362
363
364	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
365	# FUER FOLGEJOBS BENOETIGT WIRD
366	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
367	do
368	case $option in
369	(a) afname=$OPTARG;;
370	(A) store_on_archive_system=false; mc="$mc -A";;
371	(b) do_batch=true; mc="$mc -b";;
372	(B) delete_temporary_catalog=false; mc="$mc -B";;
373	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
374	(C) restart_run=true; mc="$mc -C";;
375	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
376	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
377	(F) job_on_file="-D"; mc="$mc -F";;
378	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
379	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
380	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
381	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
382	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
383	(I) ignore_archive_error=true; mc="$mc -I";;
384	(k) keep_data_from_previous_run=true; mc="$mc -k";;
385	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
386	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
387	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
388	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
389	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
390	(O) use_openmp=true; mc="$mc -O";;
391	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
392	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
393	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
394	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
395	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
396	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
397	(S) read_from_config=false; mc="$mc -S";;
398	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
399	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
400	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
401	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
402	(v) silent=true; mc="$mc -v";;
403	(x) do_trace=true;set -x; mc="$mc -x";;
404	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
405	(Y) run_coupled_model=true; mc="$mc -Y";;
406	(\?) printf "\n +++ unknown option $OPTARG \n"
407	printf "\n --> type \"$0 ?\" for available options \n"
408	locat=parameter;exit;;
409	esac
410	done
411
412
413	# EVTL. POSITIONSPARAMETER EINLESEN
414	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
415	shift OPTIND-1
416
417
418	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
419	if [[ "$1" = "?" ]]
420	then
421	(printf "\n *** mrun can be called as follows:\n"
422	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
423	printf "\n Description of available options:\n"
424	printf "\n Option Description Default-Value"
425	printf "\n -a base name of input files equiv. -d"
426	printf "\n -A no archiving when using file-attribute fl"
427	printf "\n -b batch-job on local machine ---"
428	printf "\n -B do not delete temporary directory at end ---"
429	printf "\n -c configuration file .mrun.config"
430	printf "\n -d base name of files attached to program test"
431	printf "\n -D preprocessor(cpp)-directives \"\" "
432	printf "\n -F create remote job file only ---"
433	printf "\n -h execution host $localhost_realname"
434	printf "\n -i INPUT control list \"\" "
435	printf "\n -I archiving errors of previous batch-jobs"
436	printf "\n will be ignored"
437	printf "\n -k keep data from previous run"
438	printf "\n -K additional conditions for controling"
439	printf "\n usage of conditional code and"
440	printf "\n env-variables in configuration file \"\" "
441	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
442	printf "\n -M Makefile name Makefile"
443	printf "\n -n node usage (shared/not_shared) depending on -h"
444	printf "\n -o OUTPUT control list \"\" "
445	printf "\n -O use OpenMP ---"
446	printf "\n -p software package list \"\" "
447	printf "\n -q queue \"$queue\" "
448	printf "\n -r run control list (combines -i -o) \"\" "
449	printf "\n -s filenames of routines to be compiled \"\" "
450	printf "\n must end with .f, .f90, .F, or .c !"
451	printf "\n use \"..\" for more than one file and wildcards"
452	printf "\n -s TEST compiles all files with w-permit"
453	printf "\n -S config file interpreted by shellscript ---"
454	printf "\n -t allowed cpu-time in seconds (batch) 0"
455	printf "\n -T tasks per node depending on -h"
456	printf "\n -u username on remote machine \"\" "
457	printf "\n -v no prompt for confirmation ---"
458	printf "\n -x tracing of mrun for debug purposes ---"
459	printf "\n -X # of processors (on parallel machines) 1"
460	printf "\n -Y run coupled model ---"
461	printf "\n "
462	printf "\n Possible values of positional parameter <modus>:"
463	printf "\n \"?\" - this outline \n\n") \| more
464	exit
465	elif [[ "$1" != "" ]]
466	then
467	printf "\n +++ positional parameter $1 unknown \n"
468	locat=parameter; exit
469	fi
470
471
472
473	# KURZE STARTMELDUNG
474	printf "\n*** $version "
475	printf "\n will be executed. Please wait ..."
476
477
478
479	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
480	if [[ ! -f $config_file ]]
481	then
482	printf "\n\n +++ configuration file: "
483	printf "\n $config_file"
484	printf "\n does not exist"
485	locat=connect; exit
486	fi
487
488
489	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
490	line=""
491	grep "%host_identifier" $config_file > tmp_mrun
492	while read line
493	do
494	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
495	then
496	HOSTNAME=`echo $line \| cut -d" " -s -f2`
497	host_identifier=`echo $line \| cut -d" " -s -f3`
498	if [[ $localhost_realname = $HOSTNAME ]]
499	then
500	localhost=$host_identifier
501	break
502	fi
503	fi
504	done < tmp_mrun
505
506	if [[ "$localhost" = "" ]]
507	then
508	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
509	printf "\n for local host \"$localhost_realname\"."
510	printf "\n Please add line"
511	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
512	printf "\n to the configuration file."
513	locat=localhost; exit
514	fi
515
516
517
518	# HOSTSPEZIFISCHE VARIABLEN SETZEN
519	case $localhost_realname in
520	(breg-en0\|berni-en0) archive_system=tivoli;;
521	(cs*) archive_system=ut;;
522	(fimm.bccs.uib.no) fimm=true;;
523	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
524	(hreg-en0\|hanni-en0) archive_system=tivoli;;
525	(scirocco) scirocco=true;;
526	esac
527
528
529
530	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
531	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
532	[[ "$afname" = "" ]] && afname=$fname
533
534
535	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
536	if [[ "$run_mode" != "" ]]
537	then
538	input_list="$input_list $run_mode"
539	output_list="$output_list $run_mode"
540	fi
541
542
543	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
544	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
545	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
546	# STARTET)
547	if [[ "$fromhost" = "" ]]
548	then
549	fromhost=$localhost
550	fi
551
552
553	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
554	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
555	then
556	source_list=TEST
557	local_compile=true
558	host=$localhost
559	fi
560
561
562	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
563	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
564	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
565	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
566	if [[ -n $host && "$host" != $localhost ]]
567	then
568	do_batch=true
569	do_remote=true
570	case $host in
571	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
572	(*) printf "\n"
573	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
574	printf "\n is not available"
575	locat=nqs; (( iec = 0 )); exit;;
576	esac
577	else
578	host=$localhost
579	fi
580
581
582	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
583	if [[ -n $additional_conditions ]]
584	then
585	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
586	cond1=`echo $additional_conditions \| cut -d" " -f1`
587	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
588	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
589	if [[ -n $dummy ]]
590	then
591	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
592	locat=options; exit
593	fi
594	fi
595
596
597	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
598	# ARCHIVIERUNG FEHLGESCHLAGEN IST
599	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
600	then
601	if [[ $ignore_archive_error = false ]]
602	then
603	printf "\n +++ data archiving of previous run failed"
604	printf "\n see directory \~/job_queue on remote machine"
605	locat=archive; exit
606	else
607	printf "\n +++ warning: data archiving in a previous run failed"
608	printf "\n MRUN continues, trying to get backup copy"
609	fi
610	fi
611
612
613
614	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
615	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
616	if [[ "$read_from_config" = false ]]
617	then
618
619	[[ $silent = false ]] && printf "\n Reading the configuration file... "
620	while read zeile
621	do
622	[[ $silent = false ]] && printf "."
623
624
625	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
626	# ERSETZEN
627	eval zeile=\"$zeile\"
628
629
630	# INTERPRETATION DER ZEILE
631	if [[ "$(echo $zeile)" = "" ]]
632	then
633	# LEERZEILE, KEINE AKTION
634	continue
635
636	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
637	then
638
639	# ZEILE IST KOMMENTARZEILE
640	true
641
642	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
643	then
644
645	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
646	zeile=$(echo $zeile \| cut -c2-)
647	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
648	var=`echo $zeile \| cut -d" " -f1`
649	value=`echo $zeile \| cut -d" " -s -f2`
650	for_host=`echo $zeile \| cut -d" " -s -f3`
651	for_cond1=`echo $zeile \| cut -d" " -s -f4`
652	for_cond2=`echo $zeile \| cut -d" " -s -f5`
653
654	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
655	then
656
657	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
658	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
659	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
660
661
662	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
663	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
664	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
665	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
666	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
667	# KONFIGURATIONSDATEI
668	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
669	then
670	eval $var=\$value
671
672	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
673	if [[ $do_trace = true ]]
674	then
675	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
676	fi
677	fi
678
679	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
680	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
681	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
682	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
683	if [[ $var = host ]]
684	then
685	if [[ -n $host && "$host" != $localhost ]]
686	then
687	do_batch=true
688	do_remote=true
689	case $host in
690	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
691	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
692	printf "\n is not available"
693	locat=nqs; exit;;
694	esac
695	else
696	host=$localhost
697	fi
698	fi
699
700	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
701	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
702	# DEN PROGRAMMEN BENOETIGT WERDEN
703	export $var
704	fi
705
706
707
708
709	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
710	then
711
712	# ZEILE DEFINIERT ERROR-KOMMANDO
713	(( iec = iec + 1 ))
714	zeile=$(echo $zeile \| cut -c4-)
715	err_command[$iec]="$zeile"
716
717	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
718	then
719
720	# ZEILE DEFINIERT INPUT-KOMMANDO
721	(( iic = iic + 1 ))
722	zeile=$(echo $zeile \| cut -c4-)
723	in_command[$iic]="$zeile"
724
725	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
726	then
727
728	# ZEILE DEFINIERT OUTPUT-KOMMANDO
729	(( ioc = ioc + 1 ))
730	zeile=$(echo $zeile \| cut -c4-)
731	out_command[$ioc]="$zeile"
732
733	else
734
735	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
736	# s2a: in/out - Feld
737	# s2b: loc - Feld (optional)
738	# s2c: tr/ar - Feld (optional)
739	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
740	s1=`echo $zeile \| cut -d" " -f1`
741	s2=`echo $zeile \| cut -d" " -s -f2`
742	s2a=$(echo $s2 \| cut -d":" -f1)
743	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
744	then
745	s2b=""
746	s2c=""
747	else
748	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
749	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
750	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
751	fi
752	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
753	s3=`echo $zeile \| cut -d" " -f3`
754	s4=`echo $zeile \| cut -d" " -s -f4`
755	s5=`echo $zeile \| cut -d" " -s -f5`
756	s6=`echo $zeile \| cut -d" " -s -f6`
757
758
759	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
760	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
761	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
762	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
763	# HANDEN SEIN MUSS (D.H. s2b = loc)
764	IFSALT="$IFS"; IFS="$IFS:"
765	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
766	then
767	found=false
768	for actual in $input_list
769	do
770	for formal in $s3
771	do
772	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
773	done
774	done
775	if [[ $found = true ]]
776	then
777	(( iin = iin + 1 ))
778	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
779	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
780	extin[$iin]=$s6
781	fi
782	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
783	then
784	found=false
785	for actual in $output_list
786	do
787	for formal in $s3
788	do
789	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
790	done
791	done
792	if [[ $found = true ]]
793	then
794	(( iout = iout + 1 ))
795	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
796	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
797	fi
798	elif [[ "$s2a" != in && "$s2a" != out ]]
799	then
800	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
801	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
802	locat=connect; exit
803	fi
804	IFS="$IFSALT"
805	fi
806	done < $config_file
807
808	else
809
810
811	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
812	[[ $silent = false ]] && printf "..."
813	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
814	export interpreted_config_file=.icf.$RANDOM
815
816
817
818	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
819	# VERFUEGUNG STELLEN
820	cat > .mrun_environment << %%END%%
821	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
822	config_file = '$config_file', do_remote = '$do_remote',
823	do_trace = '$do_trace', host = '$host',
824	input_list = '$input_list', icf = '$interpreted_config_file',
825	localhost = '$localhost', output_list = '$output_list' /
826
827	%%END%%
828
829	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
830	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
831	mrun_memory=$memory
832	mrun_group_number=$group_number
833	mrun_cpumax=$cpumax
834	mrun_numprocs=$numprocs
835
836	if [[ $localhost_realname = "gate" ]]
837	then
838	interpret_config_gate.x
839	else
840	interpret_config.x
841	fi
842	rm .mrun_environment
843
844
845	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
846	chmod u+x $interpreted_config_file
847	export PATH=$PATH:.
848	. $interpreted_config_file
849	rm $interpreted_config_file
850
851
852	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
853	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
854	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
855	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
856	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
857
858	fi
859
860
861	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
862	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
863	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
864	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
865	if [[ "$SOURCES_COMPLETE" = "" ]]
866	then
867
868	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
869	# VEREINBART WURDE
870	source_path=""
871	line=""
872	grep "%source_path" $config_file > tmp_mrun
873	while read line
874	do
875	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
876	then
877	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
878	then
879	global_source_path=`echo $line \| cut -d" " -f2`
880	fi
881	fi
882	done < tmp_mrun
883
884	line=""
885	found=false
886	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
887	while read line
888	do
889	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
890	then
891	if [[ $found = true ]]
892	then
893	printf "\n\n +++ more than one source path found in configuration file"
894	printf "\n for local host \"$localhost\" "
895	locat=source_path; exit
896	fi
897	source_path=`echo $line \| cut -d" " -f2`
898	found=true
899	fi
900	done < tmp_mrun
901	rm tmp_mrun
902
903	if [[ "$source_path" = "" ]]
904	then
905	if [[ "$global_source_path" != "" ]]
906	then
907	source_path=$global_source_path
908	else
909	printf "\n\n +++ no source path found in configuration file"
910	printf "\n for local host \"$localhost\" "
911	locat=source_path; exit
912	fi
913	fi
914	eval source_path=$source_path
915
916	if [[ ! -d $source_path ]]
917	then
918	printf "\n\n +++ source path \"$source_path\" on local host"
919	printf "\n \"$localhost\" does not exist"
920	locat=source_path; exit
921	fi
922
923	fi
924
925
926	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
927	# DURCH OPTION -G MITGETEILT)
928	if [[ "$global_revision" = "" ]]
929	then
930	global_revision=`svnversion $source_path 2>/dev/null`
931	global_revision="Rev: $global_revision"
932	fi
933
934
935	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
936	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
937	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
938	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
939	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
940	if [[ -n $host && "$host" != $localhost ]]
941	then
942	do_batch=true
943	do_remote=true
944	case $host in
945	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
946	(*) printf "\n"
947	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
948	printf "\n is not available"
949	locat=nqs; (( iec = 0 )); exit;;
950	esac
951	else
952	host=$localhost
953	fi
954
955
956	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
957	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
958	then
959
960	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
961	if [[ ! -n $numprocs ]]
962	then
963	printf "\n"
964	printf "\n +++ option \"-K parallel\" requires additional specification"
965	printf "\n of the number of processors to be used by"
966	printf "\n mrun-option \"-X\" or by environment-variable"
967	printf "\n \"numprocs\" in the configuration file"
968	locat=numprocs; (( iec = 0 )); exit
969	fi
970
971	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
972	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
973	# GESAMTPROZESSORANZAHL IST
974	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
975	then
976	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
977	(( ival = $tasks_per_node ))
978	(( pes = numprocs ))
979	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
980	# then
981	# (( pes = pes - 1 ))
982	# fi
983	(( ii = pes / ival ))
984	if (( pes - ii * ival > 0 ))
985	then
986	printf "\n"
987	printf "\n +++ tasks per node (option \"-T\") must be an integral"
988	printf "\n divisor of the total number of processors (option \"-X\")"
989	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
990	locat=tasks_per_node; (( iec = 0 )); exit
991	fi
992	fi
993
994	# IBMY HAT NUR EINEN KNOTEN
995	if [[ $host = ibmy ]]
996	then
997	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
998	then
999	printf "\n"
1000	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1001	printf "\n total number of processors (option \"-X\")"
1002	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1003	locat=tasks_per_node; (( iec = 0 )); exit
1004	fi
1005	fi
1006
1007	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1008	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1009	if [[ $use_openmp = true ]]
1010	then
1011	threads_per_task=$tasks_per_node
1012	tasks_per_node=1
1013	fi
1014	OOPT="-O $threads_per_task"
1015	TOPT="-T $tasks_per_node"
1016
1017	# GESAMTZAHL DER KNOTEN BESTIMMEN
1018	if [[ "$tasks_per_node" != "" ]]
1019	then
1020	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1021	fi
1022
1023	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1024	# SETZEN
1025	if [[ $node_usage = default ]]
1026	then
1027	if [[ $host = ibms ]]
1028	then
1029	node_usage=shared
1030	elif [[ $host = lctit ]]
1031	then
1032	node_usage=sla3
1033	else
1034	node_usage=not_shared
1035	fi
1036	fi
1037	if [[ $node_usage != shared && $node_usage != not_shared && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
1038	then
1039	printf "\n"
1040	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1041	printf "\n \"shared\" or \"not_shared\""
1042	locat=tasks_per_node; (( iec = 0 )); exit
1043	fi
1044
1045	fi
1046
1047	# PRUEFEN, OB HOSTFILE EXISTIERT
1048	if [[ -n $hostfile ]]
1049	then
1050	if [[ ! -f $hostfile ]]
1051	then
1052	printf "\n"
1053	printf "\n +++ hostfile \"$hostfile\" does not exist"
1054	locat=hostfile; exit
1055	fi
1056	fi
1057
1058	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1059	if [[ $host = ibmy && $do_remote = false ]]
1060	then
1061	if [[ ! -f $HOME/.rhosts ]]
1062	then
1063	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1064	printf "\n\n *** file:"
1065	printf "\n $HOME/.rhosts"
1066	printf "\n was created\n"
1067	fi
1068	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1069	then
1070	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1071	printf "\n\n *** file:"
1072	printf "\n $HOME/.rhosts"
1073	printf "\n was extended by the name of the current host\n"
1074	fi
1075	fi
1076
1077
1078
1079	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1080	if [[ $queue = none ]]
1081	then
1082	case $host in
1083	(ibmb) if [[ $node_usage = shared ]]
1084	then
1085	queue=cshare
1086	else
1087	queue=csolo
1088	fi;;
1089	(ibmh) if [[ $node_usage = shared ]]
1090	then
1091	queue=cshare
1092	else
1093	queue=csolo
1094	fi;;
1095	(ibmy) queue=parallel;;
1096	(lctit) queue=sla3;;
1097	(nech) queue=none;;
1098	(neck) queue=P;;
1099	(unics) queue=unics;;
1100	esac
1101	fi
1102
1103
1104	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1105	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1106	# ERMITTELN
1107	(( i = 0 ))
1108	while (( i < iin ))
1109	do
1110	(( i = i + 1 ))
1111	(( maxcycle = 0 ))
1112
1113	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1114	if [[ "${actionin[$i]}" = di ]]
1115	then
1116	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1117	# REM-MASCHINE AUSWERTEN
1118	eval filename=${pathin[$i]}/${endin[$i]}
1119	else
1120	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1121	# REM-MASCHINE AUSWERTEN
1122	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1123	fi
1124
1125	# PRUEFEN AUF VORHANDENSEIN
1126	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1127	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1128	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1129	then
1130	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1131	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1132	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1133	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1134	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1135	if [[ "${transin[$i]}" != "locopt" ]]
1136	then
1137	printf "\n\n +++ INPUT-file: "
1138	if [[ "${extin[$i]}" = "" ]]
1139	then
1140	printf "\n $filename"
1141	else
1142	printf "\n $filename.${extin[$i]}"
1143	fi
1144	printf "\n does not exist\n"
1145	locat=input; exit
1146	else
1147	transin[$i]="unavailable"
1148	fi
1149	else
1150
1151	# ZYKLUSNUMMER FESTSTELLEN
1152	ls -1 -d $filename > filelist 2>/dev/null
1153	ls -1 -d $filename.* >> filelist 2>/dev/null
1154	while read zeile
1155	do
1156	cycle=$(print $zeile \| cut -f2 -d".")
1157	if [[ "$cycle" = "$zeile" ]]
1158	then
1159	(( icycle = 0 ))
1160	elif [[ "$cycle" = "${extin[$i]}" ]]
1161	then
1162	(( icycle = 0 ))
1163	else
1164	(( icycle = $cycle ))
1165	fi
1166	if (( icycle > maxcycle ))
1167	then
1168	(( maxcycle = icycle ))
1169	file_to_be_used=$zeile
1170	fi
1171	done <filelist
1172	rm filelist
1173
1174	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1175	if (( maxcycle > 0 ))
1176	then
1177	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1178	then
1179	filename=${filename}.$maxcycle.${extin[$i]}
1180	else
1181	filename=${filename}.$maxcycle
1182	fi
1183	else
1184	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1185	then
1186	filename=${filename}.${extin[$i]}
1187	fi
1188	fi
1189
1190	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1191	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1192	absnamein[$i]=$filename
1193	if (( maxcycle > 0 ))
1194	then
1195	if [[ "${actionin[$i]}" = di ]]
1196	then
1197	frelin[$i]=${endin[$i]}.$maxcycle
1198	else
1199	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1200	fi
1201	else
1202	if [[ "${actionin[$i]}" = di ]]
1203	then
1204	frelin[$i]=${endin[$i]}
1205	else
1206	frelin[$i]=${afname}${endin[$i]}
1207	fi
1208	fi
1209
1210	fi
1211	done
1212
1213
1214	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1215	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1216	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1217	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1218	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1219	(( i = 0 ))
1220	while (( i < iout ))
1221	do
1222	(( i = i + 1 ))
1223	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1224	then
1225	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1226	then
1227	actionout[$i]=""
1228	elif [[ "${actionout[$i]}" = tra ]]
1229	then
1230	actionout[$i]=a
1231	fi
1232	(( maxcycle = 0 ))
1233	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1234	eval catalogname=${pathout[$i]}
1235	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1236	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1237	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1238	then
1239
1240	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1241	if cat /dev/null > $filename
1242	then
1243	rm $filename
1244	else
1245
1246	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1247	if [[ ! -d $catalogname ]]
1248	then
1249	if mkdir -p $catalogname
1250	then
1251	printf "\n\n *** directory:"
1252	printf "\n $catalogname"
1253	printf "\n was created\n"
1254	else
1255	printf "\n\n +++ OUTPUT-file:"
1256	printf "\n $filename"
1257	printf "\n cannot be created, because directory does not exist"
1258	printf "\n and cannot be created either"
1259	printf "\n"
1260	locat=output ; exit
1261	fi 2>/dev/null
1262	else
1263	printf "\n\n +++ OUTPUT-file:"
1264	printf "\n $filename"
1265	printf "\n cannot be created, although directory exists"
1266	printf "\n"
1267	locat=output ; exit
1268	fi
1269	fi 2>/dev/null
1270	else
1271
1272	# ZYKLUSNUMMER FESTSTELLEN
1273	ls -1 -d $filename > filelist 2>/dev/null
1274	ls -1 -d $filename.* >> filelist 2>/dev/null
1275	while read zeile
1276	do
1277	cycle=$(print $zeile \| cut -f2 -d".")
1278	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1279	then
1280	(( icycle = 1 ))
1281	else
1282	(( icycle = $cycle + 1 ))
1283	fi
1284	if (( icycle > maxcycle ))
1285	then
1286	(( maxcycle = icycle ))
1287	fi
1288	done <filelist
1289	rm filelist
1290	fi
1291
1292	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1293	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1294	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1295	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1296	if [[ "${actionout[$i]}" != a ]]
1297	then
1298	if (( maxcycle > 0 ))
1299	then
1300	filename=${filename}.$maxcycle
1301	if cat /dev/null > $filename
1302	then
1303	rm $filename
1304	else
1305	printf "\n +++ OUTPUT-file:"
1306	printf "\n $filename"
1307	printf "\n cannot be created"
1308	locat=output ; exit
1309	fi
1310	fi
1311	else
1312	(( maxcycle = maxcycle - 1 ))
1313	if (( maxcycle > 0 ))
1314	then
1315	filename=${filename}.$maxcycle
1316	fi
1317	fi
1318
1319	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1320	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1321	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1322	pathout[$i]=$filename
1323	if (( maxcycle > 0 ))
1324	then
1325	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1326	else
1327	frelout[$i]=${fname}${endout[$i]}
1328	fi
1329
1330	fi
1331	done
1332
1333
1334	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1335	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1336	then
1337	if [[ "$dvrp_inc" = "" ]]
1338	then
1339	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1340	printf "\n This is required for the dvrp_graphics package.\n"
1341	locat=dvrp; exit
1342	fi
1343	if [[ "$dvrp_lib" = "" ]]
1344	then
1345	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1346	printf "\n This is required for the dvrp_graphics package.\n"
1347	locat=dvrp; exit
1348	fi
1349	fi
1350
1351
1352	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1353	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1354	# UEBERSETZT ZU WERDEN)
1355	if [[ "$mainprog" = "" && "$executable" = "" ]]
1356	then
1357	printf "\n +++ neither main program nor executable defined"
1358	locat=source; exit
1359	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1360	then
1361	printf "\n +++ main program as well as executable defined"
1362	locat=source; exit
1363	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1364	then
1365	do_compile=false
1366	fi
1367
1368
1369	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1370	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1371	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1372	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1373	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1374	then
1375
1376	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1377	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1378
1379	if [[ $restart_run != true ]]
1380	then
1381	rm -rf SOURCES_FOR_RUN_$fname
1382	mkdir SOURCES_FOR_RUN_$fname
1383	fi
1384
1385
1386	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1387	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1388	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1389	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1390	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1391	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1392	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1393	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1394	# GESAMMELT
1395	if [[ "$source_list" = WRITE_PERMIT ]]
1396	then
1397
1398	source_list=""
1399	cd $source_path
1400
1401
1402	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1403	Names=$(ls -1 *.f90 2>&1)
1404	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1405	Names=$(ls -1 *.F90 2>&1)
1406	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1407	Names=$(ls -1 *.F 2>&1)
1408	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1409	Names=$(ls -1 *.f 2>&1)
1410	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1411	Names=$(ls -1 *.c 2>&1)
1412	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1413
1414
1415	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1416	for dateiname in $Filenames
1417	do
1418	if [[ -w $dateiname ]]
1419	then
1420	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1421	then
1422	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1423	source_list=$source_list"$dateiname "
1424	fi
1425	fi
1426	done
1427
1428	cd - > /dev/null
1429
1430
1431	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1432	then
1433
1434	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1435	source_list=""
1436	cd $source_path
1437
1438
1439	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1440	if [[ ! -d .svn ]]
1441	then
1442	printf "\n\n +++ source directory"
1443	printf "\n \"$source_path\" "
1444	printf "\n is not under control of \"subversion\"."
1445	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1446	fi
1447
1448
1449	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1450	Filenames=""
1451	svn status > tmp_mrun
1452	while read line
1453	do
1454	firstc=`echo $line \| cut -c1`
1455	if [[ $firstc = M \|\| $firstc = "?" ]]
1456	then
1457	Name=`echo "$line" \| cut -c8-`
1458	extension=`echo $Name \| cut -d. -f2`
1459	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1460	then
1461	Filenames="$Filenames "$Name
1462	fi
1463	fi
1464	done < tmp_mrun
1465
1466
1467	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1468	for dateiname in $Filenames
1469	do
1470	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1471	source_list=$source_list"$dateiname "
1472	done
1473
1474	cd - > /dev/null
1475
1476
1477	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1478	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1479	# VORHANDEN
1480	elif [[ "$source_list" != "" && $restart_run != true ]]
1481	then
1482
1483	cd $source_path
1484
1485	for filename in $source_list
1486	do
1487
1488	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1489	if [[ $(print $filename \| grep -c "/") != 0 ]]
1490	then
1491	printf "\n +++ source code file: $filename"
1492	printf "\n must not contain (\"/\") "
1493	locat=source; exit
1494	fi
1495
1496	if [[ ! -f $filename ]]
1497	then
1498	printf "\n +++ source code file: $filename"
1499	printf "\n does not exist"
1500	locat=source; exit
1501	else
1502	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1503	fi
1504
1505	done
1506
1507	cd - > /dev/null
1508
1509	fi
1510
1511
1512	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1513	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1514	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1515	if [[ $restart_run != true ]]
1516	then
1517
1518	if [[ ! -f "$source_path/$mainprog" ]]
1519	then
1520	printf "\n\n +++ main program: $mainprog"
1521	printf "\n does not exist in source directory"
1522	printf "\n \"$source_path\"\n"
1523	locat=source; exit
1524	else
1525	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1526	then
1527	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1528	source_list=${mainprog}" $source_list"
1529	fi
1530	fi
1531	fi
1532
1533
1534	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1535	if [[ $restart_run != true && "$add_source_path" != "" ]]
1536	then
1537
1538	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1539	if [[ ! -d $add_source_path ]]
1540	then
1541	printf "\n\n +++ WARNING: additional source code directory"
1542	printf "\n \"$add_source_path\" "
1543	printf "\n does not exist or is not a directory."
1544	printf "\n No source code will be used from this directory!\n"
1545	add_source_path=""
1546	sleep 3
1547	else
1548
1549	cd $add_source_path
1550
1551	Names=$(ls -1 *.f90 2>&1)
1552	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1553	Names=$(ls -1 *.F90 2>&1)
1554	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1555	Names=$(ls -1 *.F 2>&1)
1556	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1557	Names=$(ls -1 *.f 2>&1)
1558	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1559	Names=$(ls -1 *.c 2>&1)
1560	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1561
1562	cd - > /dev/null
1563	cd SOURCES_FOR_RUN_$fname
1564
1565	for dateiname in $AddFilenames
1566	do
1567	if [[ -f $dateiname ]]
1568	then
1569	printf "\n +++ source code file \"$dateiname\" found in additional"
1570	printf "\n source code directory \"$add_source_path\" "
1571	printf "\n as well as in directory \"$source_path\"."
1572	locat=source; exit
1573	fi
1574
1575	cp $add_source_path/$dateiname .
1576	source_list="$source_list $dateiname"
1577
1578	# Default User-Interface von der Liste entfernen, falls Datei
1579	# ein User-Interface enthaelt
1580	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1581	then
1582	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1583	then
1584	rm -rf user_interface.f90
1585	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1586	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1587	printf "\n since a user-interface is found in file"
1588	printf "\n \"$add_source_path/$dateiname\" \n"
1589	sleep 3
1590	else
1591	printf "\n\n *** user-interface file \"$dateiname\" "
1592	printf "\n added to the files to be translated \n"
1593	sleep 3
1594	fi
1595	fi
1596	done
1597
1598	cd - > /dev/null
1599	fi
1600	fi
1601
1602
1603	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1604	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1605	if [[ $restart_run != true && -n $package_list ]]
1606	then
1607
1608	cd $source_path
1609
1610	for package in $package_list
1611	do
1612
1613	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1614
1615	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1616	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1617	# LIEFERT
1618	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1619
1620
1621	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1622	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1623	for source_list_name in $package_source_list
1624	do
1625	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1626	then
1627
1628	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1629	ending=`echo $source_list_name \| cut -f2 -d.`
1630	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1631	then
1632	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1633	source_list="$source_list $source_list_name"
1634	fi
1635	fi
1636	done
1637	done
1638
1639	cd - > /dev/null
1640	fi
1641
1642
1643	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1644	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1645	if [[ "$restart_run" != true ]]
1646	then
1647	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1648	if [[ ! -f $makefile ]]
1649	then
1650	printf "\n +++ file \"$makefile\" does not exist"
1651	locat=make; exit
1652	else
1653	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1654	fi
1655	fi
1656
1657	fi # do_compile=true
1658
1659
1660	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1661	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1662	if [[ $do_compile = true ]]
1663	then
1664
1665	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1666	# ZUSAMMENSETZEN
1667	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1668	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1669	then
1670	cpp_options="${cpp_options},-D__ibm=__ibm"
1671	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1672	then
1673	cpp_options="$cpp_options -D__nec"
1674	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1675	then
1676	cpp_options="$cpp_options -D__lc"
1677	else
1678	cpp_options="$cpp_options -D__$localhost"
1679	fi
1680
1681	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1682	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1683	then
1684	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1685	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1686	else
1687	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1688	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1689	fi
1690
1691	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1692	if [[ -n $package_list ]]
1693	then
1694	for package in $package_list
1695	do
1696	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1697	then
1698	if [[ $package != "dvrp_graphics+1PE" ]]
1699	then
1700	cpp_options="${cpp_options},-D__$package=__$package"
1701	else
1702	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1703	export use_seperate_pe_for_dvrp_output=true
1704	fi
1705	else
1706	if [[ $package != "dvrp_graphics+1PE" ]]
1707	then
1708	cpp_options="$cpp_options -D__$package"
1709	else
1710	cpp_options="$cpp_options -D__dvrp_graphics"
1711	export use_seperate_pe_for_dvrp_output=true
1712	fi
1713	fi
1714	done
1715	fi
1716
1717	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1718	if [[ -n $cpp_opts ]]
1719	then
1720	for popts in $cpp_opts
1721	do
1722	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1723	then
1724	cpp_options="${cpp_options},-D__$popts=__$popts"
1725	else
1726	cpp_options="$cpp_options -D__$popts"
1727	fi
1728	done
1729	fi
1730
1731	else
1732
1733
1734	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1735	if [[ $do_remote = false ]]
1736	then
1737	if [[ ! -f $executable ]]
1738	then
1739	printf "\n +++ executable file: $executable"
1740	printf "\n does not exist"
1741	locat=executable; exit
1742	fi
1743	fi
1744	fi
1745
1746
1747	# JOBMODUS FESTSTELLEN
1748	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1749	then
1750	jobmo=BATCH
1751	else
1752	jobmo=INTERACTIVE
1753	fi
1754
1755
1756	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1757	# DURCH BENUTZER ANDERWEITIG VEREINBART
1758	if [[ "$compiler_name" = "" ]]
1759	then
1760
1761	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1762	locat=compiler_name; exit
1763
1764	fi
1765
1766
1767	# COMPILER AUF NECK UEBERSCHREIBEN
1768	[[ $localhost = neck ]] && compiler_name=mpif90
1769
1770
1771
1772	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1773	kennung=$RANDOM
1774	if [[ "$tmp_user_catalog" = "" ]]
1775	then
1776	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1777	then
1778	tmp_user_catalog=$TMPDIR
1779	elif [[ $localhost = nech ]]
1780	then
1781	tmp_user_catalog=$WRKSHR
1782	else
1783	tmp_user_catalog=/tmp
1784	fi
1785	fi
1786	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1787
1788
1789	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1790	# BESTIMMEN
1791	if [[ "$tmp_data_catalog" = "" ]]
1792	then
1793	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1794	then
1795	tmp_data_catalog=$WORK/mrun_restart_data
1796	elif [[ $localhost = nech ]]
1797	then
1798	tmp_data_catalog=$WRKSHR/mrun_restart_data
1799	else
1800	tmp_data_catalog=/tmp/mrun_restart_data
1801	fi
1802	fi
1803
1804
1805	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1806	# ERSETZEN
1807	if [[ $do_remote = false && $do_compile = true ]]
1808	then
1809	eval fopts=\"$fopts\"
1810	eval lopts=\"$lopts\"
1811	fi
1812
1813
1814
1815	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1816	fopts="$fopts $netcdf_inc $dvrp_inc"
1817	lopts="$lopts $netcdf_lib $dvrp_lib"
1818	ROPTS="$ropts"
1819	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit \|\| $host = lcfimm ) && -n $numprocs ]]
1820	then
1821	XOPT="-X $numprocs"
1822	fi
1823
1824
1825
1826	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1827	# GRAMM BENOETIGT
1828	done=false
1829	while [[ $done = false ]]
1830	do
1831	cputime=$cpumax
1832	if (( $cputime == 0 ))
1833	then
1834	printf "\n +++ cpu-time is undefined"
1835	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1836	printf "\n >>> "
1837	read cputime 1>/dev/null 2>&1
1838	else
1839	done=true
1840	fi
1841	cpumax=$cputime
1842	done
1843
1844	(( minuten = cputime / 60 ))
1845	(( sekunden = cputime - minuten * 60 ))
1846
1847
1848	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1849	if [[ $do_batch = true ]]
1850	then
1851	done=false
1852	while [[ $done = false ]]
1853	do
1854	if (( memory == 0 ))
1855	then
1856	printf "\n +++ memory demand is undefined"
1857	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1858	printf "\n >>> "
1859	read memory 1>/dev/null 2>&1
1860	else
1861	done=true
1862	fi
1863	done
1864	fi
1865
1866
1867	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1868	if [[ $do_remote = true && -z $remote_username ]]
1869	then
1870	while [[ -z $remote_username ]]
1871	do
1872	printf "\n +++ username on remote host \"$host\" is undefined"
1873	printf "\n >>> Please type username:"
1874	printf "\n >>> "
1875	read remote_username
1876	done
1877	mc="$mc -u$remote_username"
1878	fi
1879
1880	###########################################################################
1881	# HEADER-AUSGABE
1882	###########################################################################
1883
1884
1885	calltime=$(date)
1886	printf "\n"
1887	# [[ $silent = false ]] && clear
1888	printf "#--------------------------------------------------------------# \n"
1889	printf "\| $version$calltime \| \n"
1890	printf "\| \| \n"
1891	spalte1="called on:"; spalte2=$localhost_realname
1892	printf "\| $spalte1$spalte2 \| \n"
1893	if [[ $local_compile = false ]]
1894	then
1895	if [[ $do_remote = true ]]
1896	then
1897	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1898	else
1899	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1900	fi
1901	else
1902	spalte1="compiling test only!"; spalte2=""
1903	fi
1904	printf "\| $spalte1$spalte2 \| \n"
1905	if [[ -n $numprocs ]]
1906	then
1907	spalte1="number of PEs:"; spalte2=$numprocs
1908	printf "\| $spalte1$spalte2 \| \n"
1909	fi
1910	if [[ -n $tasks_per_node ]]
1911	then
1912	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1913	printf "\| $spalte1$spalte2 \| \n"
1914	fi
1915	if [[ $threads_per_task != 1 ]]
1916	then
1917	spalte1="threads per task:"; spalte2="$threads_per_task"
1918	printf "\| $spalte1$spalte2 \| \n"
1919	fi
1920	printf "\| \| \n"
1921	if [[ $do_compile = true ]]
1922	then
1923	spalte1=cpp-directives:; spalte2=$cpp_options
1924	printf "\| $spalte1$spalte2 \| \n"
1925	zeile=$(echo "$cpp_options" \| cut -c41-)
1926	while [[ "$zeile" != "" ]]
1927	do
1928	spalte1=""
1929	spalte2=$zeile
1930	printf "\| $spalte1$spalte2 \| \n"
1931	zeile=$(echo "$zeile" \| cut -c41-)
1932	done
1933
1934	spalte1=compiler-options:; spalte2="$fopts"
1935	printf "\| $spalte1$spalte2 \| \n"
1936	zeile=$(echo "$fopts" \| cut -c41-)
1937	while [[ "$zeile" != "" ]]
1938	do
1939	spalte1=""
1940	spalte2=$zeile
1941	printf "\| $spalte1$spalte2 \| \n"
1942	zeile=$(echo "$zeile" \| cut -c41-)
1943	done
1944
1945	spalte1=linker-options:; spalte2=$lopts
1946	printf "\| $spalte1$spalte2 \| \n"
1947	zeile=$(echo "$lopts" \| cut -c41-)
1948	while [[ "$zeile" != "" ]]
1949	do
1950	spalte1=""
1951	spalte2=$zeile
1952	printf "\| $spalte1$spalte2 \| \n"
1953	zeile=$(echo "$zeile" \| cut -c41-)
1954	done
1955
1956	spalte1="main program":; spalte2=$mainprog
1957	printf "\| $spalte1$spalte2 \| \n"
1958	else
1959	spalte1=executable:; spalte2=$executable
1960	printf "\| $spalte1$spalte2 \| \n"
1961	fi
1962	printf "\| \| \n"
1963	spalte1="base name of files":; spalte2=$fname
1964	printf "\| $spalte1$spalte2 \| \n"
1965	if [[ $fname != $afname ]]
1966	then
1967	spalte1="base name of input files":; spalte2=$afname
1968	printf "\| $spalte1$spalte2 \| \n"
1969	fi
1970	spalte1="INPUT control list":; spalte2=$input_list
1971	printf "\| $spalte1$spalte2 \| \n"
1972	spalte1="OUTPUT control list":; spalte2=$output_list
1973	printf "\| $spalte1$spalte2 \| \n"
1974
1975	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
1976	then
1977	spalte1="memory demand / PE":; spalte2="$memory MB"
1978	printf "\| $spalte1$spalte2 \| \n"
1979	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
1980	printf "\| $spalte1$spalte2 \| \n"
1981	fi
1982
1983	if [[ $do_compile = true ]]
1984	then
1985	printf "\| \| \n"
1986	printf "\| Files to be compiled: \| \n"
1987	zeile=$source_list
1988	while [[ "$zeile" != "" ]]
1989	do
1990	spalte3=$zeile
1991	printf "\| $spalte3 \| \n"
1992	zeile=$(echo "$zeile" \| cut -c61-)
1993	done
1994	fi
1995	printf "#--------------------------------------------------------------#"
1996
1997
1998
1999	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2000	if [[ $do_trace = true ]]
2001	then
2002	(( i = 0 ))
2003	while (( i < iin ))
2004	do
2005	(( i = i + 1 ))
2006	if (( i == 1 ))
2007	then
2008	printf "\n\n >>> INPUT-file assignments:\n"
2009	fi
2010	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2011	done
2012	(( i = 0 ))
2013	while (( i < iout ))
2014	do
2015	(( i = i + 1 ))
2016	if (( i == 1 ))
2017	then
2018	printf "\n\n >>> OUTPUT-file assignments:\n"
2019	fi
2020	printf "\n ${localout[$i]} : ${pathout[$i]}"
2021	done
2022	(( i = 0 ))
2023	while (( i < iic ))
2024	do
2025	(( i = i + 1 ))
2026	if (( i == 1 ))
2027	then
2028	printf "\n\n >>> INPUT-commands:\n"
2029	fi
2030	printf "\n ${in_command[$i]}"
2031	done
2032	(( i = 0 ))
2033	while (( i < ioc ))
2034	do
2035	(( i = i + 1 ))
2036	if (( i == 1 ))
2037	then
2038	printf "\n\n >>> OUTPUT-commands:\n"
2039	fi
2040	printf "\n ${out_command[$i]}"
2041	done
2042	fi
2043
2044
2045	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2046	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2047	then
2048	antwort=dummy
2049	printf "\n\n"
2050	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2051	do
2052	printf " >>> everything o.k. (y/n) ? "
2053	read antwort
2054	done
2055	if [[ $antwort = n \|\| $antwort = N ]]
2056	then
2057	locat=user_abort; (( iec = 0 )); exit
2058	fi
2059	if [[ $do_batch = true ]]
2060	then
2061	printf " >>> batch-job will be created and submitted"
2062	else
2063	if [[ $local_compile = false ]]
2064	then
2065	printf " >>> MRUN will now continue to execute on this machine"
2066	else
2067	printf " >>> a test compilation will now be carried out on this machine"
2068	fi
2069	fi
2070	fi
2071
2072
2073
2074
2075	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2076	# CHENDE AKTIONEN DURCHGEFUEHRT
2077	if [[ $do_batch = false ]]
2078	then
2079
2080
2081	# TEMPORAEREN KATALOG ERZEUGEN
2082	mkdir -p $TEMPDIR
2083	chmod go+rx $TEMPDIR
2084	tmpcreate=true
2085
2086
2087	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2088	# TEMPORAERES VERZEICHNIS KOPIEREN
2089	if [[ $do_compile = true ]]
2090	then
2091
2092	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2093	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2094	if [[ $localhost = nech ]]
2095	then
2096	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2097	if mkdir -p $TEMPDIR_COMPILE
2098	then
2099	printf "\n *** \"$TEMPDIR_COMPILE\" "
2100	printf "\n is generated as temporary directory for cross compiling\n"
2101	else
2102	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2103	printf "\n needed for cross compilation failed"
2104	locat=compile
2105	exit
2106	fi
2107	else
2108	TEMPDIR_COMPILE=$TEMPDIR
2109	fi
2110
2111
2112	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2113	line=""
2114	grep "%depository_path" $config_file > tmp_mrun
2115	while read line
2116	do
2117	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2118	then
2119	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2120	then
2121	global_depository_path=`echo $line \| cut -d" " -s -f2`
2122	fi
2123	fi
2124	done < tmp_mrun
2125
2126	line=""
2127	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2128	while read line
2129	do
2130	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2131	then
2132	local_depository_path=`echo $line \| cut -d" " -s -f2`
2133	fi
2134	done < tmp_mrun
2135
2136	if [[ "$local_depository_path" = "" ]]
2137	then
2138	if [[ "$global_depository_path" != "" ]]
2139	then
2140	local_depository_path=$global_depository_path
2141	else
2142	printf "\n\n +++ no depository path found in configuration file"
2143	printf "\n for local host \"$localhost\" "
2144	printf "\n please set \"\%depository_path\" in configuration file\n"
2145	locat=config_file; exit
2146	fi
2147	fi
2148	eval local_depository_path=$local_depository_path
2149
2150	basename=`print $mainprog \| cut -f1 -d"."`
2151	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2152	if [[ ! -f $make_depository ]]
2153	then
2154	printf "\n"
2155	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2156	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2157	else
2158	cp $make_depository $TEMPDIR_COMPILE
2159	cd $TEMPDIR_COMPILE
2160	tar -xf $make_depository > /dev/null 2>&1
2161	cd - > /dev/null
2162	fi
2163
2164	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2165
2166	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2167	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2168	# MAKEFILE EINTRAGEN
2169	cd $TEMPDIR_COMPILE
2170	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2171	if [[ "$interface_file" != "" ]]
2172	then
2173	interface_file=`echo $interface_file \| cut -d"." -f1`
2174	mv Makefile Makefile_old
2175	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2176	fi
2177	cd - > /dev/null
2178	else
2179	cp $executable ${TEMPDIR}/a.out
2180	fi
2181
2182
2183	# WECHSEL IN TEMPORAEREN KATALOG
2184	cd $TEMPDIR
2185	printf "\n *** changed to temporary directory: $TEMPDIR"
2186
2187
2188	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2189	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2190	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2191	# ERMITTELN
2192	(( i = 0 ))
2193	while (( i < iout ))
2194	do
2195	(( i = i + 1 ))
2196	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2197	then
2198	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2199	else
2200	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2201	fi
2202	done
2203
2204
2205	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2206	if [[ $do_compile = true ]]
2207	then
2208
2209
2210	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2211	printf "\n\n\n *** compilation starts \n$striche\n"
2212	printf " *** compilation with make using following options:\n"
2213	printf " compilername: $compiler_name\n"
2214	printf " options: $fopts\n"
2215	printf " preprocessor-directives: $cpp_options \n"
2216	printf " linker-options: $lopts \n"
2217	printf " source code files: $source_list \n"
2218
2219	if [[ $localhost = nech ]]
2220	then
2221	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2222	cp $TEMPDIR_COMPILE/a.out .
2223	[[ $? != 0 ]] && compile_error=true
2224	rm -rf $TEMPDIR_COMPILE
2225	else
2226	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2227	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2228	fi
2229
2230	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2231	then
2232	printf "\n +++ error occured while compiling or linking"
2233	locat=compile
2234	exit
2235	else
2236	printf "$striche\n *** compilation finished \n"
2237	fi
2238	fi
2239
2240
2241	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2242	if [[ $local_compile = true ]]
2243	then
2244	cd $HOME
2245	rm -rf $TEMPDIR
2246	locat=local_compile; exit
2247	fi
2248
2249
2250	# BEREITSTELLEN DER INPUT-DATEIEN
2251	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2252	(( i = 0 ))
2253	while (( i < iin ))
2254	do
2255	(( i = i + 1 ))
2256	if (( i == 1 ))
2257	then
2258	printf "\n\n *** providing INPUT-files:\n$striche"
2259	fi
2260
2261
2262	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2263	if [[ "${transin[$i]}" = unavailable ]]
2264	then
2265	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2266	then
2267	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2268	printf "\n is not available!"
2269	else
2270	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2271	printf "\n is not available!"
2272	fi
2273	continue
2274	fi
2275
2276	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2277	files_for_pes=false; datentyp=file
2278	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2279	then
2280	files_for_pes=true; datentyp=directory
2281	actionin[$i]=""
2282	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2283	then
2284	actionin[$i]=""
2285	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2286	then
2287	files_for_pes=true; datentyp=directory
2288	actionin[$i]="ar"
2289	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2290	then
2291	actionin[$i]="ar"
2292	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2293	then
2294	files_for_pes=true; datentyp=directory
2295	actionin[$i]="fl"
2296	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2297	then
2298	actionin[$i]="fl"
2299	fi
2300
2301	if [[ $files_for_pes = true ]]
2302	then
2303	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2304	else
2305	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2306	fi
2307
2308	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2309	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2310	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2311	# SERVER ZU HOLEN
2312	if [[ "${actionin[$i]}" = fl ]]
2313	then
2314	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2315	if [[ $files_for_pes = false ]]
2316	then
2317	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2318	then
2319	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2320	got_tmp[$i]=true
2321	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2322	then
2323	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2324	printf "\n *** trying to use backup copy in \"$WORK\" "
2325	cp $WORK/${frelin[$i]} ${localin[$i]}
2326	else
2327	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2328	printf "\n or \"$tmp_data_catalog\" does not exist!"
2329	printf "\n *** trying to get copy from archive"
2330	actionin[$i]=ar
2331	fi
2332	else
2333	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2334	then
2335	mkdir ${localin[$i]}
2336	cd $tmp_data_catalog/${frelin[$i]}
2337	for file in $(ls *)
2338	do
2339	ln $file $TEMPDIR/${localin[$i]}
2340	done
2341	cd $TEMPDIR
2342	got_tmp[$i]=true
2343	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2344	then
2345	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2346	printf "\n *** trying to use backup copy in \"$WORK\" "
2347	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2348	else
2349	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2350	printf "\n or \"$tmp_data_catalog\" does not exist!"
2351	printf "\n *** trying to get copy from archive"
2352	actionin[$i]=ar
2353	fi
2354	fi
2355	fi
2356
2357
2358	# DATEI LIEGT AUF ARCHIV-SERVER
2359	if [[ "${actionin[$i]}" = ar ]]
2360	then
2361
2362	if [[ $files_for_pes = false ]]
2363	then
2364	printf "\n file will be restored from archive-system ($archive_system)!"
2365	else
2366	printf "\n directory will be restored from archive-system ($archive_system)!"
2367	fi
2368
2369	file_restored=false
2370
2371	if [[ $archive_system = asterix ]]
2372	then
2373	do_stagein=true
2374	(( stagein_anz = 0 ))
2375	while [[ $do_stagein = true ]]
2376	do
2377	if [[ $files_for_pes = false ]]
2378	then
2379	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2380	else
2381	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2382	fi
2383	cat STAGEIN_OUTPUT
2384	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2385	then
2386	file_restored=true
2387	do_stagein=false
2388	else
2389	(( stagein_anz = stagein_anz + 1 ))
2390	if (( stagein_anz == 10 ))
2391	then
2392	printf "\n +++ stagein stoped after 10 tries"
2393	locat=stage
2394	exit
2395	fi
2396	printf "\n +++ restoring from archive failed, trying again:"
2397	sleep 900
2398	fi
2399	done
2400	elif [[ $archive_system = DMF ]]
2401	then
2402	if [[ $files_for_pes = false ]]
2403	then
2404	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2405	locat=DMF
2406	exit
2407	else
2408	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2409	cp -r $ARCHIVE/${frelin[$i]} $PWD
2410	file_restored=true
2411	fi
2412	elif [[ $archive_system = tivoli ]]
2413	then
2414	if [[ $files_for_pes = false ]]
2415	then
2416	if [[ $localhost = ibmh ]]
2417	then
2418	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2419	else
2420	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2421	fi
2422	else
2423	(( inode = 0 ))
2424	while (( inode < nodes ))
2425	do
2426	if [[ $localhost = ibmh ]]
2427	then
2428	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2429	else
2430	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2431	fi
2432	(( inode = inode + 1 ))
2433	done
2434	fi
2435	file_restored=true
2436	elif [[ $archive_system = ut ]]
2437	then
2438	if [[ $files_for_pes = false ]]
2439	then
2440	cp $UT/${frelin[$i]} .
2441	else
2442	(( inode = 0 ))
2443	while (( inode < nodes ))
2444	do
2445	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2446	(( inode = inode + 1 ))
2447	done
2448	fi
2449	file_restored=true
2450	else
2451	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2452	locat=rearchive
2453	exit
2454	fi
2455
2456	if [[ $file_restored = true ]]
2457	then
2458
2459	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2460	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2461	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2462	if [[ $files_for_pes = false ]]
2463	then
2464	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2465	else
2466	mkdir $tmp_data_catalog/${frelin[$i]}
2467	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2468	fi
2469	got_tmp[$i]=true
2470
2471	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2472	mv ${frelin[$i]} ${localin[$i]}
2473
2474	fi
2475	fi
2476
2477
2478	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2479	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2480	then
2481
2482	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2483	then
2484
2485	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2486	printf "\n file will be provided for $numprocs processors"
2487	mkdir ${localin[$i]}
2488	ival=$numprocs
2489	(( ii = 0 ))
2490	while (( ii <= ival-1 ))
2491	do
2492	if (( ii < 10 ))
2493	then
2494	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2495	elif (( ii < 100 ))
2496	then
2497	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2498	elif (( ii < 1000 ))
2499	then
2500	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2501	else
2502	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2503	fi
2504	(( ii = ii + 1 ))
2505	done
2506
2507	else
2508
2509	if [[ $files_for_pes = true ]]
2510	then
2511
2512	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2513	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2514	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2515	# PER MOVE UMBENANNT WERDEN
2516	printf "\n providing $numprocs files for the respective processors"
2517	mkdir ${localin[$i]}
2518	cp -r ${absnamein[$i]}/* ${localin[$i]}
2519
2520	else
2521	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2522	cp ${absnamein[$i]} ${localin[$i]}
2523	fi
2524	fi
2525	fi
2526
2527	done
2528	if (( i != 0 ))
2529	then
2530	printf "\n$striche\n *** all INPUT-files provided \n"
2531	fi
2532
2533
2534	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2535	# LESEN VON PALM)
2536	cat > ENVPAR << %%END%%
2537	&envpar run_identifier = '$fname', host = '$localhost',
2538	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2539	maximum_cpu_time_allowed = ${cpumax}.,
2540	revision = '$global_revision' /
2541
2542	%%END%%
2543
2544
2545	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2546	(( i = 0 ))
2547	while (( i < iic ))
2548	do
2549	(( i = i + 1 ))
2550	if (( i == 1 ))
2551	then
2552	printf "\n\n *** execution of INPUT-commands:\n$striche"
2553	fi
2554	printf "\n >>> ${in_command[$i]}"
2555	eval ${in_command[$i]}
2556	if (( i == iic ))
2557	then
2558	printf "\n$striche\n"
2559	fi
2560	done
2561
2562
2563	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2564	cpurest=${cpumax}.
2565
2566
2567	# PROGRAMMSTART
2568	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2569	PATH=$PATH:$TEMPDIR
2570
2571	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2572	then
2573	if [[ "$ENVIRONMENT" = BATCH ]]
2574	then
2575	printf "\n +++ debug is allowed in interactive mode only"
2576	locat=debug
2577	exit
2578	fi
2579	if [[ $localhost = decalpha ]]
2580	then
2581	dxladebug a.out
2582	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2583	then
2584
2585	# SETUP THE IBM MPI ENVIRONMENT
2586	export MP_SHARED_MEMORY=yes
2587	export AIXTHREADS_SCOPE=S
2588	export OMP_NUM_THREADS=$threads_per_task
2589	export AUTHSTATE=files
2590	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2591
2592	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2593	export MP_ADAPTER_USE=shared
2594	export MP_CPU_USE=multiple
2595	export MP_TIMEOUT=1200
2596
2597	unset MP_TASK_AFFINITY
2598
2599	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2600	#(( ii = 1 ))
2601	#while (( ii <= $numprocs ))
2602	#do
2603	# echo $localhost_realname >> hostfile
2604	# (( ii = ii + 1 ))
2605	#done
2606	#export MP_HOSTFILE=hostfile
2607
2608	if [[ "$LOADLBATCH" = yes ]]
2609	then
2610	totalview poe a.out $ROPTS
2611	else
2612	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2613	export TVDSVRLAUNCHCMD=ssh
2614	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2615	fi
2616	else
2617	printf "\n +++ no debug available on \"$localhost\" "
2618	printf "\n or not implemented in mrun so far"
2619	locat=debug
2620	exit
2621	fi
2622	else
2623	if [[ -n $numprocs ]]
2624	then
2625
2626	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2627	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2628	then
2629	# SETUP THE IBM MPI ENVIRONMENT
2630	export MP_SHARED_MEMORY=yes
2631	export AIXTHREAD_SCOPE=S
2632	export OMP_NUM_THREADS=$threads_per_task
2633	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2634	export AUTHSTATE=files
2635	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2636	# export MP_PRINTENV=yes
2637
2638	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2639	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2640	export MP_WAIT_MODE=poll
2641	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2642	# export MP_EAGER_LIMIT=65535
2643
2644	# # TESTWEISE FUER TURBOMPI (JAN 05)
2645	# export MPJ_MTAB=128
2646	# export MPJ_ALLTOALL=1
2647	# export MPJ_ALLTOALLV=1
2648
2649	if [[ "$LOADLBATCH" = yes ]]
2650	then
2651	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2652	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2653	then
2654	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2655	else
2656	poe ./a.out $ROPTS
2657	fi
2658	else
2659	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2660	then
2661	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2662	elif [[ $localhost = ibmy ]]
2663	then
2664	if [[ -f $hostfile ]]
2665	then
2666	cp $hostfile hostfile
2667	else
2668	(( ii = 1 ))
2669	while (( ii <= $numprocs ))
2670	do
2671	echo $localhost_realname >> hostfile
2672	(( ii = ii + 1 ))
2673	done
2674	fi
2675	export MP_HOSTFILE=hostfile
2676	./a.out -procs $tasks_per_node $ROPTS
2677	else
2678	if [[ "$host_file" = "" ]]
2679	then
2680	printf "\n +++ no hostfile given in configuration file"
2681	locat=config_file
2682	exit
2683	else
2684	eval host_file=$host_file
2685	fi
2686	export MP_HOSTFILE=$host_file
2687	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2688	fi
2689	fi
2690	elif [[ $host = nech \|\| $host = neck ]]
2691	then
2692	(( ii = nodes ))
2693	if [[ $ii = 1 ]]
2694	then
2695	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2696	export MPIPROGINF=YES
2697	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2698	echo "*** execution on single node with mpirun"
2699	mpirun -np $numprocs ./a.out $ROPTS
2700	else
2701	(( i = 0 ))
2702	while (( i < ii ))
2703	do
2704	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2705	(( i = i + 1 ))
2706	done
2707
2708	echo "#!/bin/sh" > mpi_exec_shell
2709	echo " " >> mpi_exec_shell
2710	echo "set -u" >> mpi_exec_shell
2711	echo "F_ERRCNT=0" >> mpi_exec_shell
2712	echo "MPIPROGINV=YES" >> mpi_exec_shell
2713	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2714	echo "cpurest=$cpurest" >> mpi_exec_shell
2715	echo "fname=$fname" >> mpi_exec_shell
2716	echo "localhost=$localhost" >> mpi_exec_shell
2717	echo "return_addres=$return_addres" >> mpi_exec_shell
2718	echo "return_username=$return_username" >> mpi_exec_shell
2719	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2720	echo "write_binary=$write_binary" >> mpi_exec_shell
2721	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2722	echo " " >> mpi_exec_shell
2723	echo "export F_ERRCNT" >> mpi_exec_shell
2724	echo "export MPIPROGINV" >> mpi_exec_shell
2725	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2726	echo "export cpurest" >> mpi_exec_shell
2727	echo "export fname" >> mpi_exec_shell
2728	echo "export localhost" >> mpi_exec_shell
2729	echo "export return_addres" >> mpi_exec_shell
2730	echo "export return_username" >> mpi_exec_shell
2731	echo "export tasks_per_node" >> mpi_exec_shell
2732	echo "export write_binary" >> mpi_exec_shell
2733	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2734	echo " " >> mpi_exec_shell
2735	echo "exec ./a.out" >> mpi_exec_shell
2736
2737	chmod u+x mpi_exec_shell
2738	export MPIPROGINF=YES
2739	mpirun -f multinode_config &
2740	wait
2741
2742	fi
2743	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2744	then
2745
2746	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2747	# DOES NOT EXIST
2748	if [[ -f $hostfile ]]
2749	then
2750	cp $hostfile hostfile
2751	else
2752	(( ii = 1 ))
2753	while (( ii <= $numprocs / $threads_per_task ))
2754	do
2755	echo $localhost_realname >> hostfile
2756	(( ii = ii + 1 ))
2757	done
2758	fi
2759	(( ii = $numprocs / $threads_per_task ))
2760	eval zeile=\"`head -n $ii hostfile`\"
2761	printf "\n *** running on: $zeile"
2762	export OMP_NUM_THREADS=$threads_per_task
2763	if [[ $threads_per_task != 1 ]]
2764	then
2765	printf "\n threads per task: $threads_per_task"
2766	fi
2767	if [[ $run_coupled_model = false ]]
2768	then
2769	printf "\n\n"
2770	mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2771	else
2772	(( iii = ii / 2 ))
2773	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2774	printf "\n\n"
2775	mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2776	mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2777	wait
2778	fi
2779
2780	# if [[ $scirocco = true ]]
2781	# then
2782	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2783	# else
2784	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2785	# fi
2786
2787	elif [[ $host = decalpha ]]
2788	then
2789	dmpirun -np $numprocs a.out $ROPTS
2790	elif [[ $host = lctit ]]
2791	then
2792	export runfile=runfile.$kennung
2793
2794	echo "cd $PWD" > $runfile
2795	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2796	echo "export cpurest=$cpurest" >> $runfile
2797	echo "export fname=$fname" >> $runfile
2798	echo "export localhost=$localhost" >> $runfile
2799	echo "export return_addres=$return_addres" >> $runfile
2800	echo "export return_username=$return_username" >> $runfile
2801	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2802	echo "export write_binary=$write_binary" >> $runfile
2803	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2804	echo "./a.out" >> $runfile
2805	chmod u+x $runfile
2806
2807	if [[ "$QUEUE" = interactive ]]
2808	then
2809	mpirun -np $numprocs a.out $ROPTS
2810	else
2811	(( mem_tsubame = $memory / 1024.0 ))
2812	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
2813	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2814	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
2815	fi
2816
2817	rm $runfile
2818	else
2819	mpprun -n $numprocs a.out $ROPTS
2820	fi
2821	[[ $? != 0 ]] && execution_error=true
2822
2823
2824	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2825	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2826	then
2827	apprentice
2828	fi
2829	else
2830	a.out $ROPTS
2831	fi
2832	fi
2833	if [[ $? != 0 \|\| $execution_error = true ]]
2834	then
2835
2836	# ABBRUCH BEI LAUFZEITFEHLER
2837	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2838	printf "\n +++ runtime error occured"
2839	locat=execution
2840	exit
2841	else
2842	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2843	printf "\n$striche\n *** execution finished \n"
2844	fi
2845
2846
2847
2848	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2849	(( i = 0 ))
2850	while (( i < ioc ))
2851	do
2852	(( i = i + 1 ))
2853	if (( i == 1 ))
2854	then
2855	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2856	fi
2857	printf "\n >>> ${out_command[$i]}"
2858	eval ${out_command[$i]}
2859	if (( i == ioc ))
2860	then
2861	printf "\n$striche\n"
2862	fi
2863	done
2864
2865
2866	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2867	if [[ $do_trace = true ]]
2868	then
2869	printf "\n\n"
2870	ls -al
2871	fi
2872
2873
2874
2875	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2876	(( i = 0 ))
2877	while (( i < iout ))
2878	do
2879	(( i = i + 1 ))
2880	if (( i == 1 ))
2881	then
2882	printf "\n\n *** saving OUTPUT-files:\n$striche"
2883	fi
2884
2885	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2886	files_for_pes=false; filetyp=file
2887	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2888	then
2889	files_for_pes=true; filetyp=directory
2890	actionout[$i]=""
2891	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2892	then
2893	actionout[$i]=""
2894	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2895	then
2896	files_for_pes=true; filetyp=directory
2897	actionout[$i]="ar"
2898	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2899	then
2900	actionout[$i]="ar"
2901	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2902	then
2903	files_for_pes=true; filetyp=directory
2904	actionout[$i]="fl"
2905	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2906	then
2907	actionout[$i]="fl"
2908	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2909	then
2910	files_for_pes=true; filetyp=directory
2911	actionout[$i]="tr"
2912	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2913	then
2914	actionout[$i]="tr"
2915	fi
2916
2917	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2918	then
2919	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2920	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2921	then
2922	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
2923	else
2924
2925
2926	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2927	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2928	# REMOTE-RECHNUNGEN
2929	if [[ "${actionout[$i]}" = tr ]]
2930	then
2931	if [[ $localhost != $fromhost ]]
2932	then
2933	if [[ $files_for_pes = false ]]
2934	then
2935	cps=""
2936	cst=""
2937	else
2938	cps=-c
2939	cst="/"
2940	fi
2941	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2942	then
2943
2944	# TRANSFER IN EIGENSTAENDIGEM JOB
2945	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
2946	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
2947	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
2948	if [[ $files_for_pes = false ]]
2949	then
2950	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
2951	else
2952	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
2953	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
2954	fi
2955
2956	echo "set -x" > transfer_${localout[$i]}
2957	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
2958
2959	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
2960	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
2961	printf "\n or higher cycle\n"
2962	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
2963
2964	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
2965
2966	if [[ $localhost = nech ]]
2967	then
2968	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2969	else
2970	if [[ "$LOGNAME" = b323013 ]]
2971	then
2972	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2973	else
2974	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2975	fi
2976	fi
2977
2978	else
2979
2980	# TRANSFER INNERHALB DIESES JOBS
2981	transfer_failed=false
2982	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
2983	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
2984	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
2985	[[ $? != 0 ]] && transfer_failed=true
2986
2987	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
2988	# LOKALER MASCHINE ANLEGEN
2989	if [[ $transfer_failed = true ]]
2990	then
2991	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
2992	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
2993
2994	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
2995	# ANLEGEN.
2996	eval local_catalog=${pathout[$i]}
2997	if [[ ! -d $local_catalog ]]
2998	then
2999	printf " *** local directory does not exist. Trying to create:\n"
3000	printf " $local_catalog \n"
3001	mkdir -p $local_catalog
3002	fi
3003	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3004	transfer_problems=true
3005	fi
3006	fi
3007	else
3008
3009	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3010	actionout[$i]=""
3011	fi
3012	fi
3013
3014
3015	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3016	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3017	# REMOTE-RECHNUNGEN
3018	if [[ "${actionout[$i]}" = tra ]]
3019	then
3020	if [[ $localhost != $fromhost ]]
3021	then
3022	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3023	then
3024
3025	# TRANSFER IN EIGENSTAENDIGEM JOB
3026	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3027	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3028	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3029	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3030
3031	echo "set -x" > transfer_${localout[$i]}
3032	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3033
3034	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3035	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3036	printf "\n or higher cycle\n"
3037	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3038
3039	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3040
3041	if [[ $localhost = nech ]]
3042	then
3043	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3044	else
3045	if [[ $LOGNAME = b323013 ]]
3046	then
3047	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3048	else
3049	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3050	fi
3051	fi
3052
3053	else
3054
3055	# TRANSFER INNERHALB DIESES JOBS
3056	transfer_failed=false
3057	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3058	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3059	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3060	[[ $? != 0 ]] && transfer_failed=true
3061
3062	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3063	# LOKALER MASCHINE ANLEGEN
3064	if [[ $transfer_failed = true ]]
3065	then
3066	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3067	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3068
3069	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3070	# ANLEGEN
3071	eval local_catalog=${pathout[$i]}
3072	if [[ ! -d $local_catalog ]]
3073	then
3074	printf " *** local directory does not exist. Trying to create:\n"
3075	printf " $local_catalog \n"
3076	mkdir -p $local_catalog
3077	fi
3078
3079	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3080	transfer_problems=true
3081	fi
3082	fi
3083	else
3084
3085	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3086	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3087	actionout[$i]=a
3088	fi
3089	fi
3090
3091
3092	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3093	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3094	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3095	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3096	if [[ "${actionout[$i]}" = fl ]]
3097	then
3098	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3099	chmod g+rx $tmp_data_catalog
3100	if [[ $files_for_pes = false ]]
3101	then
3102	printf "\n >>> OUTPUT: ${localout[$i]} to"
3103	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3104	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3105	else
3106	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3107	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3108	mkdir $tmp_data_catalog/${frelout[$i]}
3109	cd ${localout[$i]}
3110	for file in $(ls *)
3111	do
3112	ln -f $file $tmp_data_catalog/${frelout[$i]}
3113	done
3114	cd $TEMPDIR
3115	fi
3116
3117
3118	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3119	if [[ $store_on_archive_system = true ]]
3120	then
3121
3122	if [[ $archive_system = asterix ]]
3123	then
3124	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3125	if [[ $files_for_pes = false ]]
3126	then
3127	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3128	else
3129	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3130	fi
3131	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3132	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3133	echo "then" >> archive_${frelout[$i]}
3134	echo " do_stageout=false" >> archive_${frelout[$i]}
3135	echo "else" >> archive_${frelout[$i]}
3136	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3137	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3138	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3139	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3140	if [[ $files_for_pes = false ]]
3141	then
3142	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3143	else
3144	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3145	fi
3146	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3147	echo "fi" >> archive_${frelout[$i]}
3148	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3149	elif [[ $archive_system = DMF ]]
3150	then
3151	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3152	if [[ $files_for_pes = false ]]
3153	then
3154	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3155	locat=DMF
3156	exit
3157	else
3158	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3159	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3160	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3161	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3162	fi
3163	elif [[ $archive_system = tivoli ]]
3164	then
3165	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3166	if [[ $files_for_pes = false ]]
3167	then
3168	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3169	echo "set -x" >> archive_${frelout[$i]}
3170	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3171	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3172	else
3173
3174	echo "set -x" >> archive_${frelout[$i]}
3175	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3176	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3177	cd $tmp_data_catalog
3178	all_files=`ls -1 ${frelout[$i]}/*`
3179	cd - > /dev/null
3180	(( inode = 0 ))
3181	(( tp1 = tasks_per_node + 1 ))
3182	while (( inode < nodes ))
3183	do
3184	# echo "*** all_files = \"$all_files\" "
3185	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3186	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3187	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3188	# echo "*** files = \"$files\" "
3189	# echo "*** all_files = \"$all_files\" "
3190	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3191	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3192	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3193	(( inode = inode + 1 ))
3194	done
3195	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3196	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3197	fi
3198	elif [[ $archive_system = ut ]]
3199	then
3200	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3201	if [[ $files_for_pes = false ]]
3202	then
3203	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3204	echo "set -x" >> archive_${frelout[$i]}
3205	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3206	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3207	else
3208
3209	echo "set -x" >> archive_${frelout[$i]}
3210	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3211	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3212	cd $tmp_data_catalog
3213	all_files=`ls -1 ${frelout[$i]}/*`
3214	cd - > /dev/null
3215	(( inode = 0 ))
3216	(( tp1 = tasks_per_node + 1 ))
3217	while (( inode < nodes ))
3218	do
3219	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3220	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3221	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3222	(( inode = inode + 1 ))
3223	done
3224	fi
3225	elif [[ $archive_system = none ]]
3226	then
3227	printf " +++ archiving on $localhost not available!\n"
3228	fi
3229
3230	if [[ $archive_system != none ]]
3231	then
3232	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3233	then
3234	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3235	subjob -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3236	elif [[ $localhost = nech ]]
3237	then
3238	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3239	fi
3240	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3241	fi
3242	else
3243	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3244	fi
3245
3246
3247	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3248	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3249	if [[ $files_for_pes = false ]]
3250	then
3251	cat /dev/null > ${pathout[$i]}
3252	else
3253	mkdir -p ${pathout[$i]}
3254	fi
3255
3256	fi
3257
3258
3259	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3260	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3261	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3262	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3263	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3264	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3265	if [[ "${actionout[$i]}" = ar ]]
3266	then
3267	if [[ $files_for_pes = false ]]
3268	then
3269	printf "\n >>> OUTPUT: ${localout[$i]} to"
3270	printf "\n ${pathout[$i]}"
3271	printf "\n File will be copied to archive-system ($archive_system) !\n"
3272	else
3273	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3274	printf "\n ${pathout[$i]}"
3275	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3276	fi
3277	mv ${localout[$i]} ${frelout[$i]}
3278
3279	file_saved=false
3280
3281	if [[ $archive_system = asterix ]]
3282	then
3283	do_stageout=true
3284	(( stageout_anz = 0 ))
3285	while [[ $do_stageout = true ]]
3286	do
3287	if [[ $files_for_pes = false ]]
3288	then
3289	stageout ${frelout[$i]} > STAGE_OUTPUT
3290	else
3291	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3292	fi
3293	cat STAGE_OUTPUT
3294	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3295	then
3296	file_saved=true
3297	do_stageout=false
3298	else
3299	if [[ $files_for_pes = false ]]
3300	then
3301	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3302	else
3303	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3304	fi
3305	(( stageout_anz = stageout_anz + 1 ))
3306	if (( stageout_anz == 10 ))
3307	then
3308	printf "\n +++ stoped after 10 unsuccessful tries!"
3309	archive_save=false
3310	do_stageout=false
3311	else
3312	printf "\n *** new try to store on archive after 15 min:"
3313	sleep 900
3314	fi
3315	fi
3316	done
3317	elif [[ $archive_system = DMF ]]
3318	then
3319	if [[ $files_for_pes = false ]]
3320	then
3321	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3322	locat=DMF
3323	exit
3324	else
3325	rm -rf $ARCHIVE/${frelout[$i]}
3326	cp -r ${frelout[$i]} $ARCHIVE
3327	fi
3328	file_saved=true
3329	elif [[ $archive_system = tivoli ]]
3330	then
3331	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3332	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3333	# GELEGT WERDEN
3334	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3335	chmod g+rx $tmp_data_catalog
3336	if [[ $files_for_pes = false ]]
3337	then
3338	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3339	else
3340	mkdir $tmp_data_catalog/${frelout[$i]}
3341	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3342	fi
3343
3344	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3345	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3346	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3347	if [[ $files_for_pes = false ]]
3348	then
3349	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3350	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3351	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3352	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3353	else
3354	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3355	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3356	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3357	fi
3358
3359	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3360	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3361	file_saved=true
3362
3363	elif [[ $archive_system = ut ]]
3364	then
3365	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3366	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3367	# GELEGT WERDEN
3368	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3369	chmod g+rx $tmp_data_catalog
3370	if [[ $files_for_pes = false ]]
3371	then
3372	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3373	else
3374	mkdir $tmp_data_catalog/${frelout[$i]}
3375	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3376	fi
3377
3378	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3379	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3380	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3381	if [[ $files_for_pes = false ]]
3382	then
3383	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3384	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3385	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3386	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3387	else
3388	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3389	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3390	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3391	fi
3392
3393	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3394	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3395	file_saved=true
3396
3397	else
3398	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3399	archive_save=false
3400	fi
3401	if [[ $file_saved = true ]]
3402	then
3403	if [[ $files_for_pes = false ]]
3404	then
3405	cat /dev/null > ${pathout[$i]}
3406	else
3407	mkdir -p ${pathout[$i]}
3408	fi
3409	fi
3410	fi
3411
3412	# APPEND AUF LOKALER MASCHINE
3413	if [[ "${actionout[$i]}" = "a" ]]
3414	then
3415	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3416	cat ${localout[$i]} >> ${pathout[$i]}
3417	fi
3418
3419	# KOPIEREN AUF LOKALER MASCHINE
3420	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3421	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3422	then
3423
3424	# KOPIEREN AUF EINPROZESSORMASCHINE
3425	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3426	then
3427	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3428	if [[ $link_local_output = true ]]
3429	then
3430	printf " using ln -f\n"
3431	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3432	fi
3433	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3434	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3435	then
3436	if [[ $link_local_output = true ]]
3437	then
3438	printf " ln failed, using cp...\n"
3439	fi
3440	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3441	fi
3442	else
3443	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3444	if [[ $link_local_output = true ]]
3445	then
3446	printf " using ln -f\n"
3447	ln -f ${localout[$i]} ${pathout[$i]}
3448	fi
3449	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3450	if [[ ! -f "${pathout[$i]}" ]]
3451	then
3452	if [[ $link_local_output = true ]]
3453	then
3454	printf " ln failed, using cp...\n"
3455	fi
3456	cp ${localout[$i]} ${pathout[$i]}
3457	fi
3458	fi
3459
3460	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3461	then
3462
3463	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3464	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3465	# WIRD DANN KOPIERT
3466	# PER MOVE UMBENANNT WERDEN
3467	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3468	if [[ $link_local_output = true ]]
3469	then
3470	printf " using ln -f\n"
3471	mkdir ${pathout[$i]}
3472	cd ${localout[$i]}
3473	for file in $(ls *)
3474	do
3475	ln -f $file ${pathout[$i]}
3476	done
3477	cd $TEMPDIR
3478	fi
3479	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
3480	if [[ ! -f "${pathout[$i]}/_0000" ]]
3481	then
3482	if [[ $link_local_output = true ]]
3483	then
3484	printf " ln failed for .../_0000, using cp...\n"
3485	fi
3486	cp -r ${localout[$i]} ${pathout[$i]}
3487	fi
3488
3489	fi
3490	fi
3491	done
3492	if (( i != 0 ))
3493	then
3494	if [[ $transfer_problems = true ]]
3495	then
3496	printf "\n$striche\n *** OUTPUT-files saved"
3497	printf "\n +++ WARNING: some data transfers failed! \n"
3498	else
3499	printf "\n$striche\n *** all OUTPUT-files saved \n"
3500	fi
3501	fi
3502
3503
3504	# EVENTUELL FOLGEJOB STARTEN
3505	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3506	if [[ -f CONTINUE_RUN ]]
3507	then
3508
3509	if [[ $archive_save = true ]]
3510	then
3511
3512	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3513	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3514	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3515	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3516	# HANDEN
3517	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3518	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3519	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3520	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3521	then
3522	mc=`echo $mc \| sed 's/#/f/g'`
3523	fi
3524
3525
3526	# JOB STARTEN
3527	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3528	echo " $mc"
3529	printf "\n$striche\n"
3530	if [[ $localhost != $fromhost ]]
3531	then
3532
3533	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3534	then
3535	echo "*** ssh will be used to initiate restart-runs!"
3536	echo " return_addres=\"$return_addres\" "
3537	echo " return_username=\"$return_username\" "
3538	if [[ $return_addres = 172.20.25.41 ]]
3539	then
3540	# WORKAROUND AUF SCIROCCO AM TIT
3541	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3542	else
3543	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3544	fi
3545	else
3546	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3547	locat=restart; exit
3548	fi
3549
3550	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3551	# DER AKTUELLE JOB ENDET
3552	sleep 30
3553
3554	else
3555
3556	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3557	# RUFEN WERDEN, AUSSER AUF lcfimm
3558	cd $LOCAL_PWD
3559	if [[ $localhost = lcfimm ]]
3560	then
3561	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3562	else
3563	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3564	fi
3565	cd - > /dev/null
3566	fi
3567	printf "\n$striche\n *** restart-run initiated \n"
3568
3569
3570	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3571	# GEHOLT WORDEN SIND, LOESCHEN
3572	(( i = 0 ))
3573	while (( i < iin ))
3574	do
3575	(( i = i + 1 ))
3576	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3577	then
3578	rm -r $tmp_data_catalog/${frelin[$i]}
3579	fi
3580	done
3581
3582	else
3583
3584	printf "\n +++ no restart-run possible, since errors occured"
3585	printf "\n during the archive process"
3586	fi
3587
3588	fi
3589
3590
3591
3592	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3593	if [[ "$email_notification" != "" ]]
3594	then
3595
3596	if [[ $localhost != $fromhost ]]
3597	then
3598	if [[ -f CONTINUE_RUN ]]
3599	then
3600	echo "PALM restart run necessary" > email_text
3601	echo "description header of actual run:" >> email_text
3602	cat CONTINUE_RUN >> email_text
3603	echo "mrun-command to restart:" >> email_text
3604	echo "$mc" >> email_text
3605	else
3606	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3607	fi
3608	mail $email_notification < email_text
3609	printf "\n *** email notification sent to \"$email_notification\" "
3610	fi
3611	fi
3612
3613
3614
3615	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3616	cd $HOME
3617	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3618
3619	else
3620
3621
3622	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3623	# CHENDE AKTIONEN DURCHGEFUEHRT
3624
3625	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3626	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3627	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3628	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3629	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
3630	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3631	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3632	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3633	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3634	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3635	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3636	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3637	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3638	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3639	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3640	if [[ $use_openmp = true ]]
3641	then
3642	mrun_com=${mrun_com}" -O"
3643	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3644	else
3645	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3646	fi
3647	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3648	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3649	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3650	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3651	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
3652	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3653	if [[ $do_remote = true ]]
3654	then
3655	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3656	fi
3657
3658
3659	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3660	jobfile=jobfile.$RANDOM
3661
3662
3663	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3664	echo "mkdir $TEMPDIR" >> $jobfile
3665	echo "cd $TEMPDIR" >> $jobfile
3666
3667
3668	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3669	if [[ $do_trace = true ]]
3670	then
3671	echo "set -x" >> $jobfile
3672	else
3673	echo "set +vx" >> $jobfile
3674	fi
3675
3676
3677	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3678	# SOWIE GEGEBENENFALLS DES MAKEFILES
3679	if [[ $do_compile = true ]]
3680	then
3681
3682	source_catalog=SOURCES_FOR_RUN_$fname
3683
3684	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3685	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3686	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3687	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3688	echo "export SOURCES_COMPLETE=true" >> $jobfile
3689	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3690
3691	for filename in $source_list
3692	do
3693	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3694	echo "cat > $filename << \"%END%\"" >> $jobfile
3695	cat $source_catalog/$filename >> $jobfile
3696	echo " " >> $jobfile
3697	echo "%END%" >> $jobfile
3698	echo " " >> $jobfile
3699	done
3700
3701	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3702	echo "cat > Makefile << \"%END%\"" >> $jobfile
3703	cat $source_catalog/Makefile >> $jobfile
3704	echo " " >> $jobfile
3705	echo "%END%" >> $jobfile
3706	echo " " >> $jobfile
3707
3708	echo "cd - > /dev/null" >> $jobfile
3709
3710	fi
3711
3712
3713	# ABSPEICHERN DER KONFIGURATIONSDATEI
3714	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3715	echo "cat > $config_file << \"%END%\"" >> $jobfile
3716	cat $config_file >> $jobfile
3717	echo "%END%" >> $jobfile
3718	echo " " >> $jobfile
3719
3720
3721	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3722	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3723	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3724	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3725	echo "%END%" >> $jobfile
3726	if [[ $host = lctit ]]
3727	then
3728	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3729	echo "mv mrun_new $mrun_script_name" >> $jobfile
3730	fi
3731	echo "chmod u+x $mrun_script_name" >> $jobfile
3732	echo "execute_mrun=true" >> $jobfile
3733	echo " " >> $jobfile
3734
3735	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3736	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3737	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3738	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3739	if [[ $do_remote = true ]]
3740	then
3741	(( i = 0 ))
3742	while (( i < iin ))
3743	do
3744	(( i = i + 1 ))
3745	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3746	if [[ "${transin[$i]}" = job ]]
3747	then
3748	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3749	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3750	echo " " >> $jobfile
3751	echo "%END%" >> $jobfile
3752	else
3753	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3754	fi
3755
3756	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3757	echo "if [[ \$? = 1 ]]" >> $jobfile
3758	echo "then" >> $jobfile
3759	echo " echo \" \" " >> $jobfile
3760	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3761	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3762	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3763	echo " execute_mrun=false" >> $jobfile
3764	echo "fi" >> $jobfile
3765	done
3766	fi
3767
3768	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3769	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3770	echo "LOCAL_PWD=$working_directory" >> $jobfile
3771	echo "export LOCAL_PWD" >> $jobfile
3772
3773	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3774	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3775	echo "export LOCAL_MRUN_PATH" >> $jobfile
3776
3777	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3778	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3779	then
3780	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3781	fi
3782
3783	# MRUN AUF ZIELRECHNER AUFRUFEN
3784	echo "set -x" >> $jobfile
3785	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3786
3787	echo 'ls -al; echo `pwd`' >> $jobfile
3788	echo "cd \$HOME" >> $jobfile
3789	echo "rm -rf $TEMPDIR" >> $jobfile
3790
3791
3792
3793
3794	# JOB PER SUBJOB STARTEN
3795	if [[ $silent = false ]]
3796	then
3797	printf "\n "
3798	else
3799	printf "\n\n"
3800	fi
3801
3802	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v $jobfile
3803	rm -rf $jobfile
3804
3805
3806	fi # ENDE REMOTE-TEIL
3807
3808
3809
3810	# ENDE DER PROZEDUR

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