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source: palm/trunk/SCRIPTS/mrun @ 148

Last change on this file since 148 was 146, checked in by raasch, 17 years ago
further updates for turbulent inflow: PE-grid change for restart is working
Property svn:keywords set to `Rev`
File size: 139.9 KB

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1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138
139
140	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
141
142	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
143	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
144	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
145
146	AddFilenames=""
147	additional_conditions=""
148	add_source_path=""
149	afname=""
150	archive_save=true
151	archive_system=none
152	compiler_name=""
153	cond1=""
154	cond2=""
155	config_file=.mrun.config
156	cpp_opts=""
157	cpp_options=""
158	cpumax=0
159	cpurest=0
160	delete_temporary_catalog=true
161	do_batch=false
162	do_compile=true
163	do_remote=false
164	do_stagein=true
165	do_stageout=true
166	do_trace=false
167	email_notification=""
168	exclude=""
169	executable=""
170	execution_error=false
171	fimm=false
172	fname=test
173	fromhost=""
174	global_revision=""
175	group_number=none
176	host=""
177	host_file=""
178	hp=""
179	ignore_archive_error=false
180	input_list=""
181	interpreted_config_file=""
182	job_on_file=""
183	keep_data_from_previous_run=false
184	localhost_realname=$(hostname)
185	local_compile=false
186	locat=normal
187	mainprog=""
188	makefile=""
189	mc=$0
190	while [[ $(echo $mc \| grep -c "/") != 0 ]]
191	do
192	mc=`echo $mc \| cut -f2- -d"/"`
193	done
194	module_files=""
195	mrun_script_name=$mc
196	netcdf_inc=""
197	netcdf_lib=""
198	netcdf_support=false
199	node_usage=default
200	numprocs=""
201	OOPT=""
202	openmp=false
203	output_list=""
204	package_list=""
205	punkte="..........................................................."
206	queue=none
207	read_from_config=""
208	restart_run=false
209	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
210	if [[ $return_addres = 130.75.105.158 ]]
211	then
212	return_addres=172.20.25.41
213	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
214	fi
215	# if [[ $return_addres = 210.117.65.1 ]]
216	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
217	# then
218	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
219	# fi
220	return_password=""
221	return_username=$LOGNAME
222	remotecall=false
223	remote_username=""
224	run_coupled_model=false
225	run_mode=""
226	scirocco=false
227	store_on_archive_system=true
228	striche=" ----------------------------------------------------------------------------"
229	silent=false
230	source_list=""
231	source_path=SOURCE
232	tasks_per_node=""
233	threads_per_task=1
234	tmpcreate=false
235	tmp_data_catalog=""
236	transfer_problems=false
237	usern=$LOGNAME
238	working_directory=`pwd`
239	TOPT=""
240	XOPT=""
241	zeit=$( date \| cut -c 12-19 )
242
243	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
244	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
245
246	typeset -R30 calltime
247	typeset -L20 spalte1
248	typeset -L40 spalte2
249	typeset -L60 spalte3
250	typeset -L35 string1=`date`
251	typeset -L12 string2=$usern
252	typeset -L12 string3=$localhost_realname
253	typeset -L12 string4
254	typeset -L12 string5
255	typeset -L30 version="MRUN 2.0 Rev$Rev: 146 $"
256
257
258
259	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
260	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
261
262	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
263	# EXPORTIERT WERDEN
264	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
265	export group_number input_list memory numprocs output_list queue run_mode
266
267
268
269	# FEHLERBEHANDLUNG
270	# BEI EXIT:
271	trap 'rm -rf $working_directory/tmp_mrun
272	if [[ $locat != localhost ]]
273	then
274	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
275	# then
276	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
277	#MRUN-calls on $localhost
278	#
279	#date and time user localhost remotehost termination mrun-command
280	#--------------------------------------------------------------------------------------------------------------------
281	#%STATEND%
282	# chmod 666 ${mrun_path}/statistik/mrun_statistik
283	# fi
284	#
285	# # EINTRAG IN DIE STATISTIK-DATEI
286	# string4=$host
287	# string5=$locat
288	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
289	# then
290	# if [[ $do_batch = true ]]
291	# then
292	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
293	# else
294	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
295	# fi
296	# fi
297	echo " " > /dev/null
298	fi
299
300	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
301	then
302
303	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
304	(( i = 0 ))
305	while (( i < iec ))
306	do
307	(( i = i + 1 ))
308	printf "\n *** Execution of ERROR-command:\n"
309	printf " >>> ${err_command[$i]}\n"
310	eval ${err_command[$i]}
311	done
312	if [[ -n $interpreted_config_file ]] then
313	rm -rf $interpreted_config_file
314	fi
315	if [[ -n .mrun_environment ]] then
316	rm -rf .mrun_environment
317	fi
318	if [[ $tmpcreate = true ]]
319	then
320	printf "\n *** Contents of \"$TEMPDIR\":\n"
321	ls -al; cd
322	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
323	fi
324	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
325	then
326	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
327	fi
328	printf "\n\n+++ MRUN killed \n\n"
329	elif [[ $locat != control_c ]]
330	then
331	printf "\n\n --> all actions finished\n\n"
332	printf " Bye, bye $usern !!\n\n"
333	fi' exit
334
335
336	# BEI TERMINAL-BREAK:
337	trap 'rm -rf $working_directory/tmp_mrun
338	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
339	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
340	then
341	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
342	fi
343	printf "\n+++ MRUN killed by \"^C\" \n\n"
344	locat=control_c
345	exit
346	' 2
347
348
349	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
350	# BEEN SET
351	if [[ "$PALM_BIN" = "" ]]
352	then
353	printf "\n +++ environment variable PALM_BIN has not been set"
354	printf "\n please set it to the directory where the PALM scripts are located"
355	locat=palm_bin; exit
356	fi
357
358
359
360	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
361	# FUER FOLGEJOBS BENOETIGT WIRD
362	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
363	do
364	case $option in
365	(a) afname=$OPTARG;;
366	(A) store_on_archive_system=false; mc="$mc -A";;
367	(b) do_batch=true; mc="$mc -b";;
368	(B) delete_temporary_catalog=false; mc="$mc -B";;
369	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
370	(C) restart_run=true; mc="$mc -C";;
371	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
372	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
373	(F) job_on_file="-D"; mc="$mc -F";;
374	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
375	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
376	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
377	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
378	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
379	(I) ignore_archive_error=true; mc="$mc -I";;
380	(k) keep_data_from_previous_run=true; mc="$mc -k";;
381	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
382	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
383	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
384	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
385	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
386	(O) use_openmp=true; mc="$mc -O";;
387	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
388	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
389	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
390	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
391	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
392	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
393	(S) read_from_config=false; mc="$mc -S";;
394	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
395	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
396	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
397	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
398	(v) silent=true; mc="$mc -v";;
399	(x) do_trace=true;set -x; mc="$mc -x";;
400	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
401	(Y) run_coupled_model=true; mc="$mc -Y";;
402	(\?) printf "\n +++ unknown option $OPTARG \n"
403	printf "\n --> type \"$0 ?\" for available options \n"
404	locat=parameter;exit;;
405	esac
406	done
407
408
409	# EVTL. POSITIONSPARAMETER EINLESEN
410	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
411	shift OPTIND-1
412
413
414	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
415	if [[ "$1" = "?" ]]
416	then
417	(printf "\n *** mrun can be called as follows:\n"
418	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
419	printf "\n Description of available options:\n"
420	printf "\n Option Description Default-Value"
421	printf "\n -a base name of input files equiv. -d"
422	printf "\n -A no archiving when using file-attribute fl"
423	printf "\n -b batch-job on local machine ---"
424	printf "\n -B do not delete temporary directory at end ---"
425	printf "\n -c configuration file .mrun.config"
426	printf "\n -d base name of files attached to program test"
427	printf "\n -D preprocessor(cpp)-directives \"\" "
428	printf "\n -F create remote job file only ---"
429	printf "\n -h execution host $localhost_realname"
430	printf "\n -i INPUT control list \"\" "
431	printf "\n -I archiving errors of previous batch-jobs"
432	printf "\n will be ignored"
433	printf "\n -k keep data from previous run"
434	printf "\n -K additional conditions for controling"
435	printf "\n usage of conditional code and"
436	printf "\n env-variables in configuration file \"\" "
437	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
438	printf "\n -M Makefile name Makefile"
439	printf "\n -n node usage (shared/not_shared) depending on -h"
440	printf "\n -o OUTPUT control list \"\" "
441	printf "\n -O use OpenMP ---"
442	printf "\n -p software package list \"\" "
443	printf "\n -q queue \"$queue\" "
444	printf "\n -r run control list (combines -i -o) \"\" "
445	printf "\n -s filenames of routines to be compiled \"\" "
446	printf "\n must end with .f, .f90, .F, or .c !"
447	printf "\n use \"..\" for more than one file and wildcards"
448	printf "\n -s TEST compiles all files with w-permit"
449	printf "\n -S config file interpreted by shellscript ---"
450	printf "\n -t allowed cpu-time in seconds (batch) 0"
451	printf "\n -T tasks per node depending on -h"
452	printf "\n -u username on remote machine \"\" "
453	printf "\n -v no prompt for confirmation ---"
454	printf "\n -x tracing of mrun for debug purposes ---"
455	printf "\n -X # of processors (on parallel machines) 1"
456	printf "\n -Y run coupled model ---"
457	printf "\n "
458	printf "\n Possible values of positional parameter <modus>:"
459	printf "\n \"?\" - this outline \n\n") \| more
460	exit
461	elif [[ "$1" != "" ]]
462	then
463	printf "\n +++ positional parameter $1 unknown \n"
464	locat=parameter; exit
465	fi
466
467
468
469	# KURZE STARTMELDUNG
470	printf "\n*** $version "
471	printf "\n will be executed. Please wait ..."
472
473
474
475	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
476	if [[ ! -f $config_file ]]
477	then
478	printf "\n\n +++ configuration file: "
479	printf "\n $config_file"
480	printf "\n does not exist"
481	locat=connect; exit
482	fi
483
484
485	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
486	line=""
487	grep "%host_identifier" $config_file > tmp_mrun
488	while read line
489	do
490	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
491	then
492	HOSTNAME=`echo $line \| cut -d" " -s -f2`
493	host_identifier=`echo $line \| cut -d" " -s -f3`
494	if [[ $localhost_realname = $HOSTNAME ]]
495	then
496	localhost=$host_identifier
497	break
498	fi
499	fi
500	done < tmp_mrun
501
502	if [[ "$localhost" = "" ]]
503	then
504	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
505	printf "\n for local host \"$localhost_realname\"."
506	printf "\n Please add line"
507	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
508	printf "\n to the configuration file."
509	locat=localhost; exit
510	fi
511
512
513
514	# HOSTSPEZIFISCHE VARIABLEN SETZEN
515	case $localhost_realname in
516	(breg-en0\|berni-en0) archive_system=tivoli;;
517	(cs*) archive_system=ut;;
518	(fimm.bccs.uib.no) fimm=true;;
519	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
520	(hreg-en0\|hanni-en0) archive_system=tivoli;;
521	(scirocco) scirocco=true;;
522	esac
523
524
525
526	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
527	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
528	[[ "$afname" = "" ]] && afname=$fname
529
530
531	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
532	if [[ "$run_mode" != "" ]]
533	then
534	input_list="$input_list $run_mode"
535	output_list="$output_list $run_mode"
536	fi
537
538
539	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
540	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
541	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
542	# STARTET)
543	if [[ "$fromhost" = "" ]]
544	then
545	fromhost=$localhost
546	fi
547
548
549	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
550	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
551	then
552	source_list=TEST
553	local_compile=true
554	host=$localhost
555	fi
556
557
558	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
559	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
560	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
561	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
562	if [[ -n $host && "$host" != $localhost ]]
563	then
564	do_batch=true
565	do_remote=true
566	case $host in
567	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
568	(*) printf "\n"
569	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
570	printf "\n is not available"
571	locat=nqs; (( iec = 0 )); exit;;
572	esac
573	else
574	host=$localhost
575	fi
576
577
578	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
579	if [[ -n $additional_conditions ]]
580	then
581	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
582	cond1=`echo $additional_conditions \| cut -d" " -f1`
583	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
584	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
585	if [[ -n $dummy ]]
586	then
587	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
588	locat=options; exit
589	fi
590	fi
591
592
593	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
594	# ARCHIVIERUNG FEHLGESCHLAGEN IST
595	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
596	then
597	if [[ $ignore_archive_error = false ]]
598	then
599	printf "\n +++ data archiving of previous run failed"
600	printf "\n see directory \~/job_queue on remote machine"
601	locat=archive; exit
602	else
603	printf "\n +++ warning: data archiving in a previous run failed"
604	printf "\n MRUN continues, trying to get backup copy"
605	fi
606	fi
607
608
609
610	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
611	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
612	if [[ "$read_from_config" = false ]]
613	then
614
615	[[ $silent = false ]] && printf "\n Reading the configuration file... "
616	while read zeile
617	do
618	[[ $silent = false ]] && printf "."
619
620
621	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
622	# ERSETZEN
623	eval zeile=\"$zeile\"
624
625
626	# INTERPRETATION DER ZEILE
627	if [[ "$(echo $zeile)" = "" ]]
628	then
629	# LEERZEILE, KEINE AKTION
630	continue
631
632	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
633	then
634
635	# ZEILE IST KOMMENTARZEILE
636	true
637
638	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
639	then
640
641	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
642	zeile=$(echo $zeile \| cut -c2-)
643	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
644	var=`echo $zeile \| cut -d" " -f1`
645	value=`echo $zeile \| cut -d" " -s -f2`
646	for_host=`echo $zeile \| cut -d" " -s -f3`
647	for_cond1=`echo $zeile \| cut -d" " -s -f4`
648	for_cond2=`echo $zeile \| cut -d" " -s -f5`
649
650	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
651	then
652
653	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
654	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
655	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
656
657
658	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
659	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
660	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
661	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
662	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
663	# KONFIGURATIONSDATEI
664	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
665	then
666	eval $var=\$value
667
668	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
669	if [[ $do_trace = true ]]
670	then
671	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
672	fi
673	fi
674
675	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
676	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
677	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
678	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
679	if [[ $var = host ]]
680	then
681	if [[ -n $host && "$host" != $localhost ]]
682	then
683	do_batch=true
684	do_remote=true
685	case $host in
686	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
687	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
688	printf "\n is not available"
689	locat=nqs; exit;;
690	esac
691	else
692	host=$localhost
693	fi
694	fi
695
696	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
697	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
698	# DEN PROGRAMMEN BENOETIGT WERDEN
699	export $var
700	fi
701
702
703
704
705	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
706	then
707
708	# ZEILE DEFINIERT ERROR-KOMMANDO
709	(( iec = iec + 1 ))
710	zeile=$(echo $zeile \| cut -c4-)
711	err_command[$iec]="$zeile"
712
713	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
714	then
715
716	# ZEILE DEFINIERT INPUT-KOMMANDO
717	(( iic = iic + 1 ))
718	zeile=$(echo $zeile \| cut -c4-)
719	in_command[$iic]="$zeile"
720
721	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
722	then
723
724	# ZEILE DEFINIERT OUTPUT-KOMMANDO
725	(( ioc = ioc + 1 ))
726	zeile=$(echo $zeile \| cut -c4-)
727	out_command[$ioc]="$zeile"
728
729	else
730
731	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
732	# s2a: in/out - Feld
733	# s2b: loc - Feld (optional)
734	# s2c: tr/ar - Feld (optional)
735	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
736	s1=`echo $zeile \| cut -d" " -f1`
737	s2=`echo $zeile \| cut -d" " -s -f2`
738	s2a=$(echo $s2 \| cut -d":" -f1)
739	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
740	then
741	s2b=""
742	s2c=""
743	else
744	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
745	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
746	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
747	fi
748	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
749	s3=`echo $zeile \| cut -d" " -f3`
750	s4=`echo $zeile \| cut -d" " -s -f4`
751	s5=`echo $zeile \| cut -d" " -s -f5`
752	s6=`echo $zeile \| cut -d" " -s -f6`
753
754
755	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
756	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
757	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
758	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
759	# HANDEN SEIN MUSS (D.H. s2b = loc)
760	IFSALT="$IFS"; IFS="$IFS:"
761	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
762	then
763	found=false
764	for actual in $input_list
765	do
766	for formal in $s3
767	do
768	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
769	done
770	done
771	if [[ $found = true ]]
772	then
773	(( iin = iin + 1 ))
774	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
775	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
776	extin[$iin]=$s6
777	fi
778	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
779	then
780	found=false
781	for actual in $output_list
782	do
783	for formal in $s3
784	do
785	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
786	done
787	done
788	if [[ $found = true ]]
789	then
790	(( iout = iout + 1 ))
791	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
792	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
793	fi
794	elif [[ "$s2a" != in && "$s2a" != out ]]
795	then
796	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
797	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
798	locat=connect; exit
799	fi
800	IFS="$IFSALT"
801	fi
802	done < $config_file
803
804	else
805
806
807	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
808	[[ $silent = false ]] && printf "..."
809	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
810	export interpreted_config_file=.icf.$RANDOM
811
812
813
814	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
815	# VERFUEGUNG STELLEN
816	cat > .mrun_environment << %%END%%
817	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
818	config_file = '$config_file', do_remote = '$do_remote',
819	do_trace = '$do_trace', host = '$host',
820	input_list = '$input_list', icf = '$interpreted_config_file',
821	localhost = '$localhost', output_list = '$output_list' /
822
823	%%END%%
824
825	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
826	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
827	mrun_memory=$memory
828	mrun_group_number=$group_number
829	mrun_cpumax=$cpumax
830	mrun_numprocs=$numprocs
831
832	if [[ $localhost_realname = "gate" ]]
833	then
834	interpret_config_gate.x
835	else
836	interpret_config.x
837	fi
838	rm .mrun_environment
839
840
841	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
842	chmod u+x $interpreted_config_file
843	export PATH=$PATH:.
844	. $interpreted_config_file
845	rm $interpreted_config_file
846
847
848	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
849	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
850	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
851	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
852	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
853
854	fi
855
856
857	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
858	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
859	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
860	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
861	if [[ "$SOURCES_COMPLETE" = "" ]]
862	then
863
864	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
865	# VEREINBART WURDE
866	source_path=""
867	line=""
868	grep "%source_path" $config_file > tmp_mrun
869	while read line
870	do
871	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
872	then
873	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
874	then
875	global_source_path=`echo $line \| cut -d" " -f2`
876	fi
877	fi
878	done < tmp_mrun
879
880	line=""
881	found=false
882	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
883	while read line
884	do
885	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
886	then
887	if [[ $found = true ]]
888	then
889	printf "\n\n +++ more than one source path found in configuration file"
890	printf "\n for local host \"$localhost\" "
891	locat=source_path; exit
892	fi
893	source_path=`echo $line \| cut -d" " -f2`
894	found=true
895	fi
896	done < tmp_mrun
897	rm tmp_mrun
898
899	if [[ "$source_path" = "" ]]
900	then
901	if [[ "$global_source_path" != "" ]]
902	then
903	source_path=$global_source_path
904	else
905	printf "\n\n +++ no source path found in configuration file"
906	printf "\n for local host \"$localhost\" "
907	locat=source_path; exit
908	fi
909	fi
910	eval source_path=$source_path
911
912	if [[ ! -d $source_path ]]
913	then
914	printf "\n\n +++ source path \"$source_path\" on local host"
915	printf "\n \"$localhost\" does not exist"
916	locat=source_path; exit
917	fi
918
919	fi
920
921
922	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
923	# DURCH OPTION -G MITGETEILT)
924	if [[ "$global_revision" = "" ]]
925	then
926	global_revision=`svnversion $source_path 2>/dev/null`
927	global_revision="Rev: $global_revision"
928	fi
929
930
931	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
932	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
933	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
934	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
935	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
936	if [[ -n $host && "$host" != $localhost ]]
937	then
938	do_batch=true
939	do_remote=true
940	case $host in
941	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
942	(*) printf "\n"
943	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
944	printf "\n is not available"
945	locat=nqs; (( iec = 0 )); exit;;
946	esac
947	else
948	host=$localhost
949	fi
950
951
952	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
953	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
954	then
955
956	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
957	if [[ ! -n $numprocs ]]
958	then
959	printf "\n"
960	printf "\n +++ option \"-K parallel\" requires additional specification"
961	printf "\n of the number of processors to be used by"
962	printf "\n mrun-option \"-X\" or by environment-variable"
963	printf "\n \"numprocs\" in the configuration file"
964	locat=numprocs; (( iec = 0 )); exit
965	fi
966
967	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
968	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
969	# GESAMTPROZESSORANZAHL IST
970	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
971	then
972	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
973	(( ival = $tasks_per_node ))
974	(( pes = numprocs ))
975	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
976	# then
977	# (( pes = pes - 1 ))
978	# fi
979	(( ii = pes / ival ))
980	if (( pes - ii * ival > 0 ))
981	then
982	printf "\n"
983	printf "\n +++ tasks per node (option \"-T\") must be an integral"
984	printf "\n divisor of the total number of processors (option \"-X\")"
985	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
986	locat=tasks_per_node; (( iec = 0 )); exit
987	fi
988	fi
989
990	# IBMY HAT NUR EINEN KNOTEN
991	if [[ $host = ibmy ]]
992	then
993	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
994	then
995	printf "\n"
996	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
997	printf "\n total number of processors (option \"-X\")"
998	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
999	locat=tasks_per_node; (( iec = 0 )); exit
1000	fi
1001	fi
1002
1003	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1004	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1005	if [[ $use_openmp = true ]]
1006	then
1007	threads_per_task=$tasks_per_node
1008	tasks_per_node=1
1009	fi
1010	OOPT="-O $threads_per_task"
1011	TOPT="-T $tasks_per_node"
1012
1013	# GESAMTZAHL DER KNOTEN BESTIMMEN
1014	if [[ "$tasks_per_node" != "" ]]
1015	then
1016	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1017	fi
1018
1019	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1020	# SETZEN
1021	if [[ $node_usage = default ]]
1022	then
1023	if [[ $host = ibms ]]
1024	then
1025	node_usage=shared
1026	elif [[ $host = lctit ]]
1027	then
1028	node_usage=sla3
1029	else
1030	node_usage=not_shared
1031	fi
1032	fi
1033	if [[ $node_usage != shared && $node_usage != not_shared && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
1034	then
1035	printf "\n"
1036	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1037	printf "\n \"shared\" or \"not_shared\""
1038	locat=tasks_per_node; (( iec = 0 )); exit
1039	fi
1040
1041	fi
1042
1043	# PRUEFEN, OB HOSTFILE EXISTIERT
1044	if [[ -n $hostfile ]]
1045	then
1046	if [[ ! -f $hostfile ]]
1047	then
1048	printf "\n"
1049	printf "\n +++ hostfile \"$hostfile\" does not exist"
1050	locat=hostfile; exit
1051	fi
1052	fi
1053
1054	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1055	if [[ $host = ibmy && $do_remote = false ]]
1056	then
1057	if [[ ! -f $HOME/.rhosts ]]
1058	then
1059	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1060	printf "\n\n *** file:"
1061	printf "\n $HOME/.rhosts"
1062	printf "\n was created\n"
1063	fi
1064	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1065	then
1066	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1067	printf "\n\n *** file:"
1068	printf "\n $HOME/.rhosts"
1069	printf "\n was extended by the name of the current host\n"
1070	fi
1071	fi
1072
1073
1074
1075	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1076	if [[ $queue = none ]]
1077	then
1078	case $host in
1079	(ibmb) if [[ $node_usage = shared ]]
1080	then
1081	queue=cshare
1082	else
1083	queue=csolo
1084	fi;;
1085	(ibmh) if [[ $node_usage = shared ]]
1086	then
1087	queue=cshare
1088	else
1089	queue=csolo
1090	fi;;
1091	(ibmy) queue=parallel;;
1092	(lctit) queue=sla3;;
1093	(nech) queue=none;;
1094	(neck) queue=P;;
1095	(unics) queue=unics;;
1096	esac
1097	fi
1098
1099
1100	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1101	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1102	# ERMITTELN
1103	(( i = 0 ))
1104	while (( i < iin ))
1105	do
1106	(( i = i + 1 ))
1107	(( maxcycle = 0 ))
1108
1109	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1110	if [[ "${actionin[$i]}" = di ]]
1111	then
1112	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1113	# REM-MASCHINE AUSWERTEN
1114	eval filename=${pathin[$i]}/${endin[$i]}
1115	else
1116	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1117	# REM-MASCHINE AUSWERTEN
1118	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1119	fi
1120
1121	# PRUEFEN AUF VORHANDENSEIN
1122	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1123	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1124	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1125	then
1126	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1127	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1128	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1129	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1130	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1131	if [[ "${transin[$i]}" != "locopt" ]]
1132	then
1133	printf "\n\n +++ INPUT-file: "
1134	if [[ "${extin[$i]}" = "" ]]
1135	then
1136	printf "\n $filename"
1137	else
1138	printf "\n $filename.${extin[$i]}"
1139	fi
1140	printf "\n does not exist\n"
1141	locat=input; exit
1142	else
1143	transin[$i]="unavailable"
1144	fi
1145	else
1146
1147	# ZYKLUSNUMMER FESTSTELLEN
1148	ls -1 -d $filename > filelist 2>/dev/null
1149	ls -1 -d $filename.* >> filelist 2>/dev/null
1150	while read zeile
1151	do
1152	cycle=$(print $zeile \| cut -f2 -d".")
1153	if [[ "$cycle" = "$zeile" ]]
1154	then
1155	(( icycle = 0 ))
1156	elif [[ "$cycle" = "${extin[$i]}" ]]
1157	then
1158	(( icycle = 0 ))
1159	else
1160	(( icycle = $cycle ))
1161	fi
1162	if (( icycle > maxcycle ))
1163	then
1164	(( maxcycle = icycle ))
1165	file_to_be_used=$zeile
1166	fi
1167	done <filelist
1168	rm filelist
1169
1170	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1171	if (( maxcycle > 0 ))
1172	then
1173	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1174	then
1175	filename=${filename}.$maxcycle.${extin[$i]}
1176	else
1177	filename=${filename}.$maxcycle
1178	fi
1179	else
1180	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1181	then
1182	filename=${filename}.${extin[$i]}
1183	fi
1184	fi
1185
1186	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1187	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1188	absnamein[$i]=$filename
1189	if (( maxcycle > 0 ))
1190	then
1191	if [[ "${actionin[$i]}" = di ]]
1192	then
1193	frelin[$i]=${endin[$i]}.$maxcycle
1194	else
1195	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1196	fi
1197	else
1198	if [[ "${actionin[$i]}" = di ]]
1199	then
1200	frelin[$i]=${endin[$i]}
1201	else
1202	frelin[$i]=${afname}${endin[$i]}
1203	fi
1204	fi
1205
1206	fi
1207	done
1208
1209
1210	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1211	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1212	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1213	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1214	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1215	(( i = 0 ))
1216	while (( i < iout ))
1217	do
1218	(( i = i + 1 ))
1219	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1220	then
1221	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1222	then
1223	actionout[$i]=""
1224	elif [[ "${actionout[$i]}" = tra ]]
1225	then
1226	actionout[$i]=a
1227	fi
1228	(( maxcycle = 0 ))
1229	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1230	eval catalogname=${pathout[$i]}
1231	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1232	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1233	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1234	then
1235
1236	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1237	if cat /dev/null > $filename
1238	then
1239	rm $filename
1240	else
1241
1242	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1243	if [[ ! -d $catalogname ]]
1244	then
1245	if mkdir -p $catalogname
1246	then
1247	printf "\n\n *** directory:"
1248	printf "\n $catalogname"
1249	printf "\n was created\n"
1250	else
1251	printf "\n\n +++ OUTPUT-file:"
1252	printf "\n $filename"
1253	printf "\n cannot be created, because directory does not exist"
1254	printf "\n and cannot be created either"
1255	printf "\n"
1256	locat=output ; exit
1257	fi 2>/dev/null
1258	else
1259	printf "\n\n +++ OUTPUT-file:"
1260	printf "\n $filename"
1261	printf "\n cannot be created, although directory exists"
1262	printf "\n"
1263	locat=output ; exit
1264	fi
1265	fi 2>/dev/null
1266	else
1267
1268	# ZYKLUSNUMMER FESTSTELLEN
1269	ls -1 -d $filename > filelist 2>/dev/null
1270	ls -1 -d $filename.* >> filelist 2>/dev/null
1271	while read zeile
1272	do
1273	cycle=$(print $zeile \| cut -f2 -d".")
1274	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1275	then
1276	(( icycle = 1 ))
1277	else
1278	(( icycle = $cycle + 1 ))
1279	fi
1280	if (( icycle > maxcycle ))
1281	then
1282	(( maxcycle = icycle ))
1283	fi
1284	done <filelist
1285	rm filelist
1286	fi
1287
1288	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1289	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1290	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1291	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1292	if [[ "${actionout[$i]}" != a ]]
1293	then
1294	if (( maxcycle > 0 ))
1295	then
1296	filename=${filename}.$maxcycle
1297	if cat /dev/null > $filename
1298	then
1299	rm $filename
1300	else
1301	printf "\n +++ OUTPUT-file:"
1302	printf "\n $filename"
1303	printf "\n cannot be created"
1304	locat=output ; exit
1305	fi
1306	fi
1307	else
1308	(( maxcycle = maxcycle - 1 ))
1309	if (( maxcycle > 0 ))
1310	then
1311	filename=${filename}.$maxcycle
1312	fi
1313	fi
1314
1315	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1316	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1317	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1318	pathout[$i]=$filename
1319	if (( maxcycle > 0 ))
1320	then
1321	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1322	else
1323	frelout[$i]=${fname}${endout[$i]}
1324	fi
1325
1326	fi
1327	done
1328
1329
1330	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1331	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1332	then
1333	if [[ "$dvrp_inc" = "" ]]
1334	then
1335	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1336	printf "\n This is required for the dvrp_graphics package.\n"
1337	locat=dvrp; exit
1338	fi
1339	if [[ "$dvrp_lib" = "" ]]
1340	then
1341	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1342	printf "\n This is required for the dvrp_graphics package.\n"
1343	locat=dvrp; exit
1344	fi
1345	fi
1346
1347
1348	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1349	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1350	# UEBERSETZT ZU WERDEN)
1351	if [[ "$mainprog" = "" && "$executable" = "" ]]
1352	then
1353	printf "\n +++ neither main program nor executable defined"
1354	locat=source; exit
1355	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1356	then
1357	printf "\n +++ main program as well as executable defined"
1358	locat=source; exit
1359	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1360	then
1361	do_compile=false
1362	fi
1363
1364
1365	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1366	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1367	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1368	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1369	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1370	then
1371
1372	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1373	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1374
1375	if [[ $restart_run != true ]]
1376	then
1377	rm -rf SOURCES_FOR_RUN_$fname
1378	mkdir SOURCES_FOR_RUN_$fname
1379	fi
1380
1381
1382	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1383	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1384	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1385	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1386	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1387	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1388	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1389	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1390	# GESAMMELT
1391	if [[ "$source_list" = WRITE_PERMIT ]]
1392	then
1393
1394	source_list=""
1395	cd $source_path
1396
1397
1398	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1399	Names=$(ls -1 *.f90 2>&1)
1400	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1401	Names=$(ls -1 *.F90 2>&1)
1402	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1403	Names=$(ls -1 *.F 2>&1)
1404	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1405	Names=$(ls -1 *.f 2>&1)
1406	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1407	Names=$(ls -1 *.c 2>&1)
1408	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1409
1410
1411	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1412	for dateiname in $Filenames
1413	do
1414	if [[ -w $dateiname ]]
1415	then
1416	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1417	then
1418	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1419	source_list=$source_list"$dateiname "
1420	fi
1421	fi
1422	done
1423
1424	cd - > /dev/null
1425
1426
1427	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1428	then
1429
1430	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1431	source_list=""
1432	cd $source_path
1433
1434
1435	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1436	if [[ ! -d .svn ]]
1437	then
1438	printf "\n\n +++ source directory"
1439	printf "\n \"$source_path\" "
1440	printf "\n is not under control of \"subversion\"."
1441	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1442	fi
1443
1444
1445	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1446	Filenames=""
1447	svn status > tmp_mrun
1448	while read line
1449	do
1450	firstc=`echo $line \| cut -c1`
1451	if [[ $firstc = M \|\| $firstc = "?" ]]
1452	then
1453	Name=`echo "$line" \| cut -c8-`
1454	extension=`echo $Name \| cut -d. -f2`
1455	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1456	then
1457	Filenames="$Filenames "$Name
1458	fi
1459	fi
1460	done < tmp_mrun
1461
1462
1463	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1464	for dateiname in $Filenames
1465	do
1466	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1467	source_list=$source_list"$dateiname "
1468	done
1469
1470	cd - > /dev/null
1471
1472
1473	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1474	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1475	# VORHANDEN
1476	elif [[ "$source_list" != "" && $restart_run != true ]]
1477	then
1478
1479	cd $source_path
1480
1481	for filename in $source_list
1482	do
1483
1484	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1485	if [[ $(print $filename \| grep -c "/") != 0 ]]
1486	then
1487	printf "\n +++ source code file: $filename"
1488	printf "\n must not contain (\"/\") "
1489	locat=source; exit
1490	fi
1491
1492	if [[ ! -f $filename ]]
1493	then
1494	printf "\n +++ source code file: $filename"
1495	printf "\n does not exist"
1496	locat=source; exit
1497	else
1498	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1499	fi
1500
1501	done
1502
1503	cd - > /dev/null
1504
1505	fi
1506
1507
1508	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1509	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1510	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1511	if [[ $restart_run != true ]]
1512	then
1513
1514	if [[ ! -f "$source_path/$mainprog" ]]
1515	then
1516	printf "\n\n +++ main program: $mainprog"
1517	printf "\n does not exist in source directory"
1518	printf "\n \"$source_path\"\n"
1519	locat=source; exit
1520	else
1521	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1522	then
1523	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1524	source_list=${mainprog}" $source_list"
1525	fi
1526	fi
1527	fi
1528
1529
1530	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1531	if [[ $restart_run != true && "$add_source_path" != "" ]]
1532	then
1533
1534	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1535	if [[ ! -d $add_source_path ]]
1536	then
1537	printf "\n\n +++ WARNING: additional source code directory"
1538	printf "\n \"$add_source_path\" "
1539	printf "\n does not exist or is not a directory."
1540	printf "\n No source code will be used from this directory!\n"
1541	add_source_path=""
1542	sleep 3
1543	else
1544
1545	cd $add_source_path
1546
1547	Names=$(ls -1 *.f90 2>&1)
1548	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1549	Names=$(ls -1 *.F90 2>&1)
1550	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1551	Names=$(ls -1 *.F 2>&1)
1552	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1553	Names=$(ls -1 *.f 2>&1)
1554	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1555	Names=$(ls -1 *.c 2>&1)
1556	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1557
1558	cd - > /dev/null
1559	cd SOURCES_FOR_RUN_$fname
1560
1561	for dateiname in $AddFilenames
1562	do
1563	if [[ -f $dateiname ]]
1564	then
1565	printf "\n +++ source code file \"$dateiname\" found in additional"
1566	printf "\n source code directory \"$add_source_path\" "
1567	printf "\n as well as in directory \"$source_path\"."
1568	locat=source; exit
1569	fi
1570
1571	cp $add_source_path/$dateiname .
1572	source_list="$source_list $dateiname"
1573
1574	# Default User-Interface von der Liste entfernen, falls Datei
1575	# ein User-Interface enthaelt
1576	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1577	then
1578	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1579	then
1580	rm -rf user_interface.f90
1581	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1582	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1583	printf "\n since a user-interface is found in file"
1584	printf "\n \"$add_source_path/$dateiname\" \n"
1585	sleep 3
1586	else
1587	printf "\n\n *** user-interface file \"$dateiname\" "
1588	printf "\n added to the files to be translated \n"
1589	sleep 3
1590	fi
1591	fi
1592	done
1593
1594	cd - > /dev/null
1595	fi
1596	fi
1597
1598
1599	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1600	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1601	if [[ $restart_run != true && -n $package_list ]]
1602	then
1603
1604	cd $source_path
1605
1606	for package in $package_list
1607	do
1608
1609	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1610
1611	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1612	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1613	# LIEFERT
1614	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1615
1616
1617	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1618	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1619	for source_list_name in $package_source_list
1620	do
1621	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1622	then
1623
1624	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1625	ending=`echo $source_list_name \| cut -f2 -d.`
1626	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1627	then
1628	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1629	source_list="$source_list $source_list_name"
1630	fi
1631	fi
1632	done
1633	done
1634
1635	cd - > /dev/null
1636	fi
1637
1638
1639	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1640	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1641	if [[ "$restart_run" != true ]]
1642	then
1643	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1644	if [[ ! -f $makefile ]]
1645	then
1646	printf "\n +++ file \"$makefile\" does not exist"
1647	locat=make; exit
1648	else
1649	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1650	fi
1651	fi
1652
1653	fi # do_compile=true
1654
1655
1656	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1657	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1658	if [[ $do_compile = true ]]
1659	then
1660
1661	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1662	# ZUSAMMENSETZEN
1663	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1664	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1665	then
1666	cpp_options="${cpp_options},-D__ibm=__ibm"
1667	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1668	then
1669	cpp_options="$cpp_options -D__nec"
1670	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1671	then
1672	cpp_options="$cpp_options -D__lc"
1673	else
1674	cpp_options="$cpp_options -D__$localhost"
1675	fi
1676
1677	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1678	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1679	then
1680	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1681	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1682	else
1683	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1684	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1685	fi
1686
1687	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1688	if [[ -n $package_list ]]
1689	then
1690	for package in $package_list
1691	do
1692	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1693	then
1694	if [[ $package != "dvrp_graphics+1PE" ]]
1695	then
1696	cpp_options="${cpp_options},-D__$package=__$package"
1697	else
1698	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1699	export use_seperate_pe_for_dvrp_output=true
1700	fi
1701	else
1702	if [[ $package != "dvrp_graphics+1PE" ]]
1703	then
1704	cpp_options="$cpp_options -D__$package"
1705	else
1706	cpp_options="$cpp_options -D__dvrp_graphics"
1707	export use_seperate_pe_for_dvrp_output=true
1708	fi
1709	fi
1710	done
1711	fi
1712
1713	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1714	if [[ -n $cpp_opts ]]
1715	then
1716	for popts in $cpp_opts
1717	do
1718	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1719	then
1720	cpp_options="${cpp_options},-D__$popts=__$popts"
1721	else
1722	cpp_options="$cpp_options -D__$popts"
1723	fi
1724	done
1725	fi
1726
1727	else
1728
1729
1730	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1731	if [[ $do_remote = false ]]
1732	then
1733	if [[ ! -f $executable ]]
1734	then
1735	printf "\n +++ executable file: $executable"
1736	printf "\n does not exist"
1737	locat=executable; exit
1738	fi
1739	fi
1740	fi
1741
1742
1743	# JOBMODUS FESTSTELLEN
1744	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1745	then
1746	jobmo=BATCH
1747	else
1748	jobmo=INTERACTIVE
1749	fi
1750
1751
1752	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1753	# DURCH BENUTZER ANDERWEITIG VEREINBART
1754	if [[ "$compiler_name" = "" ]]
1755	then
1756
1757	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1758	locat=compiler_name; exit
1759
1760	fi
1761
1762
1763	# COMPILER AUF NECK UEBERSCHREIBEN
1764	[[ $localhost = neck ]] && compiler_name=mpif90
1765
1766
1767
1768	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1769	kennung=$RANDOM
1770	if [[ "$tmp_user_catalog" = "" ]]
1771	then
1772	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1773	then
1774	tmp_user_catalog=$TMPDIR
1775	elif [[ $localhost = nech ]]
1776	then
1777	tmp_user_catalog=$WRKSHR
1778	else
1779	tmp_user_catalog=/tmp
1780	fi
1781	fi
1782	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1783
1784
1785	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1786	# BESTIMMEN
1787	if [[ "$tmp_data_catalog" = "" ]]
1788	then
1789	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1790	then
1791	tmp_data_catalog=$WORK/mrun_restart_data
1792	elif [[ $localhost = nech ]]
1793	then
1794	tmp_data_catalog=$WRKSHR/mrun_restart_data
1795	else
1796	tmp_data_catalog=/tmp/mrun_restart_data
1797	fi
1798	fi
1799
1800
1801	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1802	# ERSETZEN
1803	if [[ $do_remote = false && $do_compile = true ]]
1804	then
1805	eval fopts=\"$fopts\"
1806	eval lopts=\"$lopts\"
1807	fi
1808
1809
1810
1811	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1812	fopts="$fopts $netcdf_inc $dvrp_inc"
1813	lopts="$lopts $netcdf_lib $dvrp_lib"
1814	ROPTS="$ropts"
1815	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit \|\| $host = lcfimm ) && -n $numprocs ]]
1816	then
1817	XOPT="-X $numprocs"
1818	fi
1819
1820
1821
1822	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1823	# GRAMM BENOETIGT
1824	done=false
1825	while [[ $done = false ]]
1826	do
1827	cputime=$cpumax
1828	if (( $cputime == 0 ))
1829	then
1830	printf "\n +++ cpu-time is undefined"
1831	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1832	printf "\n >>> "
1833	read cputime 1>/dev/null 2>&1
1834	else
1835	done=true
1836	fi
1837	cpumax=$cputime
1838	done
1839
1840	(( minuten = cputime / 60 ))
1841	(( sekunden = cputime - minuten * 60 ))
1842
1843
1844	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1845	if [[ $do_batch = true ]]
1846	then
1847	done=false
1848	while [[ $done = false ]]
1849	do
1850	if (( memory == 0 ))
1851	then
1852	printf "\n +++ memory demand is undefined"
1853	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1854	printf "\n >>> "
1855	read memory 1>/dev/null 2>&1
1856	else
1857	done=true
1858	fi
1859	done
1860	fi
1861
1862
1863	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1864	if [[ $do_remote = true && -z $remote_username ]]
1865	then
1866	while [[ -z $remote_username ]]
1867	do
1868	printf "\n +++ username on remote host \"$host\" is undefined"
1869	printf "\n >>> Please type username:"
1870	printf "\n >>> "
1871	read remote_username
1872	done
1873	mc="$mc -u$remote_username"
1874	fi
1875
1876	###########################################################################
1877	# HEADER-AUSGABE
1878	###########################################################################
1879
1880
1881	calltime=$(date)
1882	printf "\n"
1883	# [[ $silent = false ]] && clear
1884	printf "#--------------------------------------------------------------# \n"
1885	printf "\| $version$calltime \| \n"
1886	printf "\| \| \n"
1887	spalte1="called on:"; spalte2=$localhost_realname
1888	printf "\| $spalte1$spalte2 \| \n"
1889	if [[ $local_compile = false ]]
1890	then
1891	if [[ $do_remote = true ]]
1892	then
1893	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1894	else
1895	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1896	fi
1897	else
1898	spalte1="compiling test only!"; spalte2=""
1899	fi
1900	printf "\| $spalte1$spalte2 \| \n"
1901	if [[ -n $numprocs ]]
1902	then
1903	spalte1="number of PEs:"; spalte2=$numprocs
1904	printf "\| $spalte1$spalte2 \| \n"
1905	fi
1906	if [[ -n $tasks_per_node ]]
1907	then
1908	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1909	printf "\| $spalte1$spalte2 \| \n"
1910	fi
1911	if [[ $threads_per_task != 1 ]]
1912	then
1913	spalte1="threads per task:"; spalte2="$threads_per_task"
1914	printf "\| $spalte1$spalte2 \| \n"
1915	fi
1916	printf "\| \| \n"
1917	if [[ $do_compile = true ]]
1918	then
1919	spalte1=cpp-directives:; spalte2=$cpp_options
1920	printf "\| $spalte1$spalte2 \| \n"
1921	zeile=$(echo "$cpp_options" \| cut -c41-)
1922	while [[ "$zeile" != "" ]]
1923	do
1924	spalte1=""
1925	spalte2=$zeile
1926	printf "\| $spalte1$spalte2 \| \n"
1927	zeile=$(echo "$zeile" \| cut -c41-)
1928	done
1929
1930	spalte1=compiler-options:; spalte2="$fopts"
1931	printf "\| $spalte1$spalte2 \| \n"
1932	zeile=$(echo "$fopts" \| cut -c41-)
1933	while [[ "$zeile" != "" ]]
1934	do
1935	spalte1=""
1936	spalte2=$zeile
1937	printf "\| $spalte1$spalte2 \| \n"
1938	zeile=$(echo "$zeile" \| cut -c41-)
1939	done
1940
1941	spalte1=linker-options:; spalte2=$lopts
1942	printf "\| $spalte1$spalte2 \| \n"
1943	zeile=$(echo "$lopts" \| cut -c41-)
1944	while [[ "$zeile" != "" ]]
1945	do
1946	spalte1=""
1947	spalte2=$zeile
1948	printf "\| $spalte1$spalte2 \| \n"
1949	zeile=$(echo "$zeile" \| cut -c41-)
1950	done
1951
1952	spalte1="main program":; spalte2=$mainprog
1953	printf "\| $spalte1$spalte2 \| \n"
1954	else
1955	spalte1=executable:; spalte2=$executable
1956	printf "\| $spalte1$spalte2 \| \n"
1957	fi
1958	printf "\| \| \n"
1959	spalte1="base name of files":; spalte2=$fname
1960	printf "\| $spalte1$spalte2 \| \n"
1961	if [[ $fname != $afname ]]
1962	then
1963	spalte1="base name of input files":; spalte2=$afname
1964	printf "\| $spalte1$spalte2 \| \n"
1965	fi
1966	spalte1="INPUT control list":; spalte2=$input_list
1967	printf "\| $spalte1$spalte2 \| \n"
1968	spalte1="OUTPUT control list":; spalte2=$output_list
1969	printf "\| $spalte1$spalte2 \| \n"
1970
1971	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
1972	then
1973	spalte1="memory demand / PE":; spalte2="$memory MB"
1974	printf "\| $spalte1$spalte2 \| \n"
1975	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
1976	printf "\| $spalte1$spalte2 \| \n"
1977	fi
1978
1979	if [[ $do_compile = true ]]
1980	then
1981	printf "\| \| \n"
1982	printf "\| Files to be compiled: \| \n"
1983	zeile=$source_list
1984	while [[ "$zeile" != "" ]]
1985	do
1986	spalte3=$zeile
1987	printf "\| $spalte3 \| \n"
1988	zeile=$(echo "$zeile" \| cut -c61-)
1989	done
1990	fi
1991	printf "#--------------------------------------------------------------#"
1992
1993
1994
1995	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
1996	if [[ $do_trace = true ]]
1997	then
1998	(( i = 0 ))
1999	while (( i < iin ))
2000	do
2001	(( i = i + 1 ))
2002	if (( i == 1 ))
2003	then
2004	printf "\n\n >>> INPUT-file assignments:\n"
2005	fi
2006	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2007	done
2008	(( i = 0 ))
2009	while (( i < iout ))
2010	do
2011	(( i = i + 1 ))
2012	if (( i == 1 ))
2013	then
2014	printf "\n\n >>> OUTPUT-file assignments:\n"
2015	fi
2016	printf "\n ${localout[$i]} : ${pathout[$i]}"
2017	done
2018	(( i = 0 ))
2019	while (( i < iic ))
2020	do
2021	(( i = i + 1 ))
2022	if (( i == 1 ))
2023	then
2024	printf "\n\n >>> INPUT-commands:\n"
2025	fi
2026	printf "\n ${in_command[$i]}"
2027	done
2028	(( i = 0 ))
2029	while (( i < ioc ))
2030	do
2031	(( i = i + 1 ))
2032	if (( i == 1 ))
2033	then
2034	printf "\n\n >>> OUTPUT-commands:\n"
2035	fi
2036	printf "\n ${out_command[$i]}"
2037	done
2038	fi
2039
2040
2041	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2042	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2043	then
2044	antwort=dummy
2045	printf "\n\n"
2046	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2047	do
2048	printf " >>> everything o.k. (y/n) ? "
2049	read antwort
2050	done
2051	if [[ $antwort = n \|\| $antwort = N ]]
2052	then
2053	locat=user_abort; (( iec = 0 )); exit
2054	fi
2055	if [[ $do_batch = true ]]
2056	then
2057	printf " >>> batch-job will be created and submitted"
2058	else
2059	if [[ $local_compile = false ]]
2060	then
2061	printf " >>> MRUN will now continue to execute on this machine"
2062	else
2063	printf " >>> a test compilation will now be carried out on this machine"
2064	fi
2065	fi
2066	fi
2067
2068
2069
2070
2071	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2072	# CHENDE AKTIONEN DURCHGEFUEHRT
2073	if [[ $do_batch = false ]]
2074	then
2075
2076
2077	# TEMPORAEREN KATALOG ERZEUGEN
2078	mkdir -p $TEMPDIR
2079	chmod go+rx $TEMPDIR
2080	tmpcreate=true
2081
2082
2083	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2084	# TEMPORAERES VERZEICHNIS KOPIEREN
2085	if [[ $do_compile = true ]]
2086	then
2087
2088	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2089	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2090	if [[ $localhost = nech ]]
2091	then
2092	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2093	if mkdir -p $TEMPDIR_COMPILE
2094	then
2095	printf "\n *** \"$TEMPDIR_COMPILE\" "
2096	printf "\n is generated as temporary directory for cross compiling\n"
2097	else
2098	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2099	printf "\n needed for cross compilation failed"
2100	locat=compile
2101	exit
2102	fi
2103	else
2104	TEMPDIR_COMPILE=$TEMPDIR
2105	fi
2106
2107
2108	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2109	line=""
2110	grep "%depository_path" $config_file > tmp_mrun
2111	while read line
2112	do
2113	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2114	then
2115	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2116	then
2117	global_depository_path=`echo $line \| cut -d" " -s -f2`
2118	fi
2119	fi
2120	done < tmp_mrun
2121
2122	line=""
2123	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2124	while read line
2125	do
2126	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2127	then
2128	local_depository_path=`echo $line \| cut -d" " -s -f2`
2129	fi
2130	done < tmp_mrun
2131
2132	if [[ "$local_depository_path" = "" ]]
2133	then
2134	if [[ "$global_depository_path" != "" ]]
2135	then
2136	local_depository_path=$global_depository_path
2137	else
2138	printf "\n\n +++ no depository path found in configuration file"
2139	printf "\n for local host \"$localhost\" "
2140	printf "\n please set \"\%depository_path\" in configuration file\n"
2141	locat=config_file; exit
2142	fi
2143	fi
2144	eval local_depository_path=$local_depository_path
2145
2146	basename=`print $mainprog \| cut -f1 -d"."`
2147	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2148	if [[ ! -f $make_depository ]]
2149	then
2150	printf "\n"
2151	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2152	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2153	else
2154	cp $make_depository $TEMPDIR_COMPILE
2155	cd $TEMPDIR_COMPILE
2156	tar -xf $make_depository > /dev/null 2>&1
2157	cd - > /dev/null
2158	fi
2159
2160	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2161
2162	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2163	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2164	# MAKEFILE EINTRAGEN
2165	cd $TEMPDIR_COMPILE
2166	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2167	if [[ "$interface_file" != "" ]]
2168	then
2169	interface_file=`echo $interface_file \| cut -d"." -f1`
2170	mv Makefile Makefile_old
2171	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2172	fi
2173	cd - > /dev/null
2174	else
2175	cp $executable ${TEMPDIR}/a.out
2176	fi
2177
2178
2179	# WECHSEL IN TEMPORAEREN KATALOG
2180	cd $TEMPDIR
2181	printf "\n *** changed to temporary directory: $TEMPDIR"
2182
2183
2184	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2185	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2186	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2187	# ERMITTELN
2188	(( i = 0 ))
2189	while (( i < iout ))
2190	do
2191	(( i = i + 1 ))
2192	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2193	then
2194	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2195	else
2196	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2197	fi
2198	done
2199
2200
2201	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2202	if [[ $do_compile = true ]]
2203	then
2204
2205
2206	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2207	printf "\n\n\n *** compilation starts \n$striche\n"
2208	printf " *** compilation with make using following options:\n"
2209	printf " compilername: $compiler_name\n"
2210	printf " options: $fopts\n"
2211	printf " preprocessor-directives: $cpp_options \n"
2212	printf " linker-options: $lopts \n"
2213	printf " source code files: $source_list \n"
2214
2215	if [[ $localhost = nech ]]
2216	then
2217	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2218	cp $TEMPDIR_COMPILE/a.out .
2219	[[ $? != 0 ]] && compile_error=true
2220	rm -rf $TEMPDIR_COMPILE
2221	else
2222	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2223	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2224	fi
2225
2226	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2227	then
2228	printf "\n +++ error occured while compiling or linking"
2229	locat=compile
2230	exit
2231	else
2232	printf "$striche\n *** compilation finished \n"
2233	fi
2234	fi
2235
2236
2237	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2238	if [[ $local_compile = true ]]
2239	then
2240	cd $HOME
2241	rm -rf $TEMPDIR
2242	locat=local_compile; exit
2243	fi
2244
2245
2246	# BEREITSTELLEN DER INPUT-DATEIEN
2247	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2248	(( i = 0 ))
2249	while (( i < iin ))
2250	do
2251	(( i = i + 1 ))
2252	if (( i == 1 ))
2253	then
2254	printf "\n\n *** providing INPUT-files:\n$striche"
2255	fi
2256
2257
2258	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2259	if [[ "${transin[$i]}" = unavailable ]]
2260	then
2261	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2262	then
2263	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2264	printf "\n is not available!"
2265	else
2266	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2267	printf "\n is not available!"
2268	fi
2269	continue
2270	fi
2271
2272	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2273	files_for_pes=false; datentyp=file
2274	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2275	then
2276	files_for_pes=true; datentyp=directory
2277	actionin[$i]=""
2278	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2279	then
2280	actionin[$i]=""
2281	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2282	then
2283	files_for_pes=true; datentyp=directory
2284	actionin[$i]="ar"
2285	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2286	then
2287	actionin[$i]="ar"
2288	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2289	then
2290	files_for_pes=true; datentyp=directory
2291	actionin[$i]="fl"
2292	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2293	then
2294	actionin[$i]="fl"
2295	fi
2296
2297	if [[ $files_for_pes = true ]]
2298	then
2299	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2300	else
2301	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2302	fi
2303
2304	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2305	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2306	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2307	# SERVER ZU HOLEN
2308	if [[ "${actionin[$i]}" = fl ]]
2309	then
2310	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2311	if [[ $files_for_pes = false ]]
2312	then
2313	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2314	then
2315	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2316	got_tmp[$i]=true
2317	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2318	then
2319	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2320	printf "\n *** trying to use backup copy in \"$WORK\" "
2321	cp $WORK/${frelin[$i]} ${localin[$i]}
2322	else
2323	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2324	printf "\n or \"$tmp_data_catalog\" does not exist!"
2325	printf "\n *** trying to get copy from archive"
2326	actionin[$i]=ar
2327	fi
2328	else
2329	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2330	then
2331	mkdir ${localin[$i]}
2332	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2333	got_tmp[$i]=true
2334	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2335	then
2336	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2337	printf "\n *** trying to use backup copy in \"$WORK\" "
2338	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2339	else
2340	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2341	printf "\n or \"$tmp_data_catalog\" does not exist!"
2342	printf "\n *** trying to get copy from archive"
2343	actionin[$i]=ar
2344	fi
2345	fi
2346	fi
2347
2348
2349	# DATEI LIEGT AUF ARCHIV-SERVER
2350	if [[ "${actionin[$i]}" = ar ]]
2351	then
2352
2353	if [[ $files_for_pes = false ]]
2354	then
2355	printf "\n file will be restored from archive-system ($archive_system)!"
2356	else
2357	printf "\n directory will be restored from archive-system ($archive_system)!"
2358	fi
2359
2360	file_restored=false
2361
2362	if [[ $archive_system = asterix ]]
2363	then
2364	do_stagein=true
2365	(( stagein_anz = 0 ))
2366	while [[ $do_stagein = true ]]
2367	do
2368	if [[ $files_for_pes = false ]]
2369	then
2370	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2371	else
2372	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2373	fi
2374	cat STAGEIN_OUTPUT
2375	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2376	then
2377	file_restored=true
2378	do_stagein=false
2379	else
2380	(( stagein_anz = stagein_anz + 1 ))
2381	if (( stagein_anz == 10 ))
2382	then
2383	printf "\n +++ stagein stoped after 10 tries"
2384	locat=stage
2385	exit
2386	fi
2387	printf "\n +++ restoring from archive failed, trying again:"
2388	sleep 900
2389	fi
2390	done
2391	elif [[ $archive_system = DMF ]]
2392	then
2393	if [[ $files_for_pes = false ]]
2394	then
2395	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2396	locat=DMF
2397	exit
2398	else
2399	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2400	cp -r $ARCHIVE/${frelin[$i]} $PWD
2401	file_restored=true
2402	fi
2403	elif [[ $archive_system = tivoli ]]
2404	then
2405	if [[ $files_for_pes = false ]]
2406	then
2407	if [[ $localhost = ibmh ]]
2408	then
2409	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2410	else
2411	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2412	fi
2413	else
2414	(( inode = 0 ))
2415	while (( inode < nodes ))
2416	do
2417	if [[ $localhost = ibmh ]]
2418	then
2419	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2420	else
2421	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2422	fi
2423	(( inode = inode + 1 ))
2424	done
2425	fi
2426	file_restored=true
2427	elif [[ $archive_system = ut ]]
2428	then
2429	if [[ $files_for_pes = false ]]
2430	then
2431	cp $UT/${frelin[$i]} .
2432	else
2433	(( inode = 0 ))
2434	while (( inode < nodes ))
2435	do
2436	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2437	(( inode = inode + 1 ))
2438	done
2439	fi
2440	file_restored=true
2441	else
2442	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2443	locat=rearchive
2444	exit
2445	fi
2446
2447	if [[ $file_restored = true ]]
2448	then
2449
2450	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2451	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2452	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2453	if [[ $files_for_pes = false ]]
2454	then
2455	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2456	else
2457	mkdir $tmp_data_catalog/${frelin[$i]}
2458	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2459	fi
2460	got_tmp[$i]=true
2461
2462	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2463	mv ${frelin[$i]} ${localin[$i]}
2464
2465	fi
2466	fi
2467
2468
2469	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2470	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2471	then
2472
2473	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2474	then
2475
2476	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2477	printf "\n file will be provided for $numprocs processors"
2478	mkdir ${localin[$i]}
2479	ival=$numprocs
2480	(( ii = 0 ))
2481	while (( ii <= ival-1 ))
2482	do
2483	if (( ii < 10 ))
2484	then
2485	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2486	elif (( ii < 100 ))
2487	then
2488	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2489	elif (( ii < 1000 ))
2490	then
2491	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2492	else
2493	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2494	fi
2495	(( ii = ii + 1 ))
2496	done
2497
2498	else
2499
2500	if [[ $files_for_pes = true ]]
2501	then
2502
2503	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2504	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2505	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2506	# PER MOVE UMBENANNT WERDEN
2507	printf "\n providing $numprocs files for the respective processors"
2508	mkdir ${localin[$i]}
2509	cp -r ${absnamein[$i]}/* ${localin[$i]}
2510
2511	else
2512	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2513	cp ${absnamein[$i]} ${localin[$i]}
2514	fi
2515	fi
2516	fi
2517
2518	done
2519	if (( i != 0 ))
2520	then
2521	printf "\n$striche\n *** all INPUT-files provided \n"
2522	fi
2523
2524
2525	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2526	# LESEN VON PALM)
2527	cat > ENVPAR << %%END%%
2528	&envpar run_identifier = '$fname', host = '$localhost',
2529	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2530	maximum_cpu_time_allowed = ${cpumax}.,
2531	revision = '$global_revision' /
2532
2533	%%END%%
2534
2535
2536	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2537	(( i = 0 ))
2538	while (( i < iic ))
2539	do
2540	(( i = i + 1 ))
2541	if (( i == 1 ))
2542	then
2543	printf "\n\n *** execution of INPUT-commands:\n$striche"
2544	fi
2545	printf "\n >>> ${in_command[$i]}"
2546	eval ${in_command[$i]}
2547	if (( i == iic ))
2548	then
2549	printf "\n$striche\n"
2550	fi
2551	done
2552
2553
2554	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2555	cpurest=${cpumax}.
2556
2557
2558	# PROGRAMMSTART
2559	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2560	PATH=$PATH:$TEMPDIR
2561
2562	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2563	then
2564	if [[ "$ENVIRONMENT" = BATCH ]]
2565	then
2566	printf "\n +++ debug is allowed in interactive mode only"
2567	locat=debug
2568	exit
2569	fi
2570	if [[ $localhost = decalpha ]]
2571	then
2572	dxladebug a.out
2573	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2574	then
2575
2576	# SETUP THE IBM MPI ENVIRONMENT
2577	export MP_SHARED_MEMORY=yes
2578	export AIXTHREADS_SCOPE=S
2579	export OMP_NUM_THREADS=$threads_per_task
2580	export AUTHSTATE=files
2581	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2582
2583	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2584	export MP_ADAPTER_USE=shared
2585	export MP_CPU_USE=multiple
2586	export MP_TIMEOUT=1200
2587
2588	unset MP_TASK_AFFINITY
2589
2590	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2591	#(( ii = 1 ))
2592	#while (( ii <= $numprocs ))
2593	#do
2594	# echo $localhost_realname >> hostfile
2595	# (( ii = ii + 1 ))
2596	#done
2597	#export MP_HOSTFILE=hostfile
2598
2599	if [[ "$LOADLBATCH" = yes ]]
2600	then
2601	totalview poe a.out $ROPTS
2602	else
2603	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2604	export TVDSVRLAUNCHCMD=ssh
2605	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2606	fi
2607	else
2608	printf "\n +++ no debug available on \"$localhost\" "
2609	printf "\n or not implemented in mrun so far"
2610	locat=debug
2611	exit
2612	fi
2613	else
2614	if [[ -n $numprocs ]]
2615	then
2616
2617	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2618	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2619	then
2620	# SETUP THE IBM MPI ENVIRONMENT
2621	export MP_SHARED_MEMORY=yes
2622	export AIXTHREAD_SCOPE=S
2623	export OMP_NUM_THREADS=$threads_per_task
2624	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2625	export AUTHSTATE=files
2626	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2627	# export MP_PRINTENV=yes
2628
2629	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2630	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2631	export MP_WAIT_MODE=poll
2632	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2633	# export MP_EAGER_LIMIT=65535
2634
2635	# # TESTWEISE FUER TURBOMPI (JAN 05)
2636	# export MPJ_MTAB=128
2637	# export MPJ_ALLTOALL=1
2638	# export MPJ_ALLTOALLV=1
2639
2640	if [[ "$LOADLBATCH" = yes ]]
2641	then
2642	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2643	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2644	then
2645	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2646	else
2647	poe ./a.out $ROPTS
2648	fi
2649	else
2650	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2651	then
2652	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2653	elif [[ $localhost = ibmy ]]
2654	then
2655	if [[ -f $hostfile ]]
2656	then
2657	cp $hostfile hostfile
2658	else
2659	(( ii = 1 ))
2660	while (( ii <= $numprocs ))
2661	do
2662	echo $localhost_realname >> hostfile
2663	(( ii = ii + 1 ))
2664	done
2665	fi
2666	export MP_HOSTFILE=hostfile
2667	./a.out -procs $tasks_per_node $ROPTS
2668	else
2669	if [[ "$host_file" = "" ]]
2670	then
2671	printf "\n +++ no hostfile given in configuration file"
2672	locat=config_file
2673	exit
2674	else
2675	eval host_file=$host_file
2676	fi
2677	export MP_HOSTFILE=$host_file
2678	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2679	fi
2680	fi
2681	elif [[ $host = nech \|\| $host = neck ]]
2682	then
2683	(( ii = nodes ))
2684	if [[ $ii = 1 ]]
2685	then
2686	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2687	export MPIPROGINF=YES
2688	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2689	echo "*** execution on single node with mpirun"
2690	mpirun -np $numprocs ./a.out $ROPTS
2691	else
2692	(( i = 0 ))
2693	while (( i < ii ))
2694	do
2695	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2696	(( i = i + 1 ))
2697	done
2698
2699	echo "#!/bin/sh" > mpi_exec_shell
2700	echo " " >> mpi_exec_shell
2701	echo "set -u" >> mpi_exec_shell
2702	echo "F_ERRCNT=0" >> mpi_exec_shell
2703	echo "MPIPROGINV=YES" >> mpi_exec_shell
2704	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2705	echo "cpurest=$cpurest" >> mpi_exec_shell
2706	echo "fname=$fname" >> mpi_exec_shell
2707	echo "localhost=$localhost" >> mpi_exec_shell
2708	echo "return_addres=$return_addres" >> mpi_exec_shell
2709	echo "return_username=$return_username" >> mpi_exec_shell
2710	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2711	echo "write_binary=$write_binary" >> mpi_exec_shell
2712	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2713	echo " " >> mpi_exec_shell
2714	echo "export F_ERRCNT" >> mpi_exec_shell
2715	echo "export MPIPROGINV" >> mpi_exec_shell
2716	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2717	echo "export cpurest" >> mpi_exec_shell
2718	echo "export fname" >> mpi_exec_shell
2719	echo "export localhost" >> mpi_exec_shell
2720	echo "export return_addres" >> mpi_exec_shell
2721	echo "export return_username" >> mpi_exec_shell
2722	echo "export tasks_per_node" >> mpi_exec_shell
2723	echo "export write_binary" >> mpi_exec_shell
2724	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2725	echo " " >> mpi_exec_shell
2726	echo "exec ./a.out" >> mpi_exec_shell
2727
2728	chmod u+x mpi_exec_shell
2729	export MPIPROGINF=YES
2730	mpirun -f multinode_config &
2731	wait
2732
2733	fi
2734	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2735	then
2736
2737	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2738	# DOES NOT EXIST
2739	if [[ -f $hostfile ]]
2740	then
2741	cp $hostfile hostfile
2742	else
2743	(( ii = 1 ))
2744	while (( ii <= $numprocs / $threads_per_task ))
2745	do
2746	echo $localhost_realname >> hostfile
2747	(( ii = ii + 1 ))
2748	done
2749	fi
2750	(( ii = $numprocs / $threads_per_task ))
2751	eval zeile=\"`head -n $ii hostfile`\"
2752	printf "\n *** running on: $zeile"
2753	export OMP_NUM_THREADS=$threads_per_task
2754	if [[ $threads_per_task != 1 ]]
2755	then
2756	printf "\n threads per task: $threads_per_task"
2757	fi
2758	if [[ $run_coupled_model = false ]]
2759	then
2760	printf "\n\n"
2761	mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2762	else
2763	(( iii = ii / 2 ))
2764	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2765	printf "\n\n"
2766	mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2767	mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2768	wait
2769	fi
2770
2771	# if [[ $scirocco = true ]]
2772	# then
2773	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2774	# else
2775	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2776	# fi
2777
2778	elif [[ $host = decalpha ]]
2779	then
2780	dmpirun -np $numprocs a.out $ROPTS
2781	elif [[ $host = lctit ]]
2782	then
2783	export runfile=runfile.$kennung
2784
2785	echo "cd $PWD" > $runfile
2786	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2787	echo "export cpurest=$cpurest" >> $runfile
2788	echo "export fname=$fname" >> $runfile
2789	echo "export localhost=$localhost" >> $runfile
2790	echo "export return_addres=$return_addres" >> $runfile
2791	echo "export return_username=$return_username" >> $runfile
2792	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2793	echo "export write_binary=$write_binary" >> $runfile
2794	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2795	echo "./a.out" >> $runfile
2796	chmod u+x $runfile
2797
2798	if [[ "$QUEUE" = interactive ]]
2799	then
2800	mpirun -np $numprocs a.out $ROPTS
2801	else
2802	(( mem_tsubame = $memory / 1024.0 ))
2803	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
2804	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2805	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
2806	fi
2807
2808	rm $runfile
2809	else
2810	mpprun -n $numprocs a.out $ROPTS
2811	fi
2812	[[ $? != 0 ]] && execution_error=true
2813
2814
2815	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2816	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2817	then
2818	apprentice
2819	fi
2820	else
2821	a.out $ROPTS
2822	fi
2823	fi
2824	if [[ $? != 0 \|\| $execution_error = true ]]
2825	then
2826
2827	# ABBRUCH BEI LAUFZEITFEHLER
2828	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2829	printf "\n +++ runtime error occured"
2830	locat=execution
2831	exit
2832	else
2833	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2834	printf "\n$striche\n *** execution finished \n"
2835	fi
2836
2837
2838
2839	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2840	(( i = 0 ))
2841	while (( i < ioc ))
2842	do
2843	(( i = i + 1 ))
2844	if (( i == 1 ))
2845	then
2846	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2847	fi
2848	printf "\n >>> ${out_command[$i]}"
2849	eval ${out_command[$i]}
2850	if (( i == ioc ))
2851	then
2852	printf "\n$striche\n"
2853	fi
2854	done
2855
2856
2857	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2858	if [[ $do_trace = true ]]
2859	then
2860	printf "\n\n"
2861	ls -al
2862	fi
2863
2864
2865
2866	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2867	(( i = 0 ))
2868	while (( i < iout ))
2869	do
2870	(( i = i + 1 ))
2871	if (( i == 1 ))
2872	then
2873	printf "\n\n *** saving OUTPUT-files:\n$striche"
2874	fi
2875
2876	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2877	files_for_pes=false; filetyp=file
2878	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2879	then
2880	files_for_pes=true; filetyp=directory
2881	actionout[$i]=""
2882	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2883	then
2884	actionout[$i]=""
2885	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2886	then
2887	files_for_pes=true; filetyp=directory
2888	actionout[$i]="ar"
2889	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2890	then
2891	actionout[$i]="ar"
2892	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2893	then
2894	files_for_pes=true; filetyp=directory
2895	actionout[$i]="fl"
2896	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2897	then
2898	actionout[$i]="fl"
2899	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2900	then
2901	files_for_pes=true; filetyp=directory
2902	actionout[$i]="tr"
2903	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2904	then
2905	actionout[$i]="tr"
2906	fi
2907
2908	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2909	then
2910	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2911	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2912	then
2913	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
2914	else
2915
2916
2917	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2918	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2919	# REMOTE-RECHNUNGEN
2920	if [[ "${actionout[$i]}" = tr ]]
2921	then
2922	if [[ $localhost != $fromhost ]]
2923	then
2924	if [[ $files_for_pes = false ]]
2925	then
2926	cps=""
2927	cst=""
2928	else
2929	cps=-c
2930	cst="/"
2931	fi
2932	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2933	then
2934
2935	# TRANSFER IN EIGENSTAENDIGEM JOB
2936	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
2937	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
2938	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
2939	if [[ $files_for_pes = false ]]
2940	then
2941	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
2942	else
2943	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
2944	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
2945	fi
2946
2947	echo "set -x" > transfer_${localout[$i]}
2948	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
2949
2950	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
2951	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
2952	printf "\n or higher cycle\n"
2953	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
2954
2955	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
2956
2957	if [[ $localhost = nech ]]
2958	then
2959	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2960	else
2961	if [[ "$LOGNAME" = b323013 ]]
2962	then
2963	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2964	else
2965	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2966	fi
2967	fi
2968
2969	else
2970
2971	# TRANSFER INNERHALB DIESES JOBS
2972	transfer_failed=false
2973	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
2974	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
2975	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
2976	[[ $? != 0 ]] && transfer_failed=true
2977
2978	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
2979	# LOKALER MASCHINE ANLEGEN
2980	if [[ $transfer_failed = true ]]
2981	then
2982	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
2983	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
2984
2985	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
2986	# ANLEGEN.
2987	eval local_catalog=${pathout[$i]}
2988	if [[ ! -d $local_catalog ]]
2989	then
2990	printf " *** local directory does not exist. Trying to create:\n"
2991	printf " $local_catalog \n"
2992	mkdir -p $local_catalog
2993	fi
2994	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
2995	transfer_problems=true
2996	fi
2997	fi
2998	else
2999
3000	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3001	actionout[$i]=""
3002	fi
3003	fi
3004
3005
3006	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3007	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3008	# REMOTE-RECHNUNGEN
3009	if [[ "${actionout[$i]}" = tra ]]
3010	then
3011	if [[ $localhost != $fromhost ]]
3012	then
3013	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3014	then
3015
3016	# TRANSFER IN EIGENSTAENDIGEM JOB
3017	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3018	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3019	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3020	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3021
3022	echo "set -x" > transfer_${localout[$i]}
3023	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3024
3025	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3026	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3027	printf "\n or higher cycle\n"
3028	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3029
3030	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3031
3032	if [[ $localhost = nech ]]
3033	then
3034	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3035	else
3036	if [[ $LOGNAME = b323013 ]]
3037	then
3038	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3039	else
3040	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3041	fi
3042	fi
3043
3044	else
3045
3046	# TRANSFER INNERHALB DIESES JOBS
3047	transfer_failed=false
3048	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3049	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3050	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3051	[[ $? != 0 ]] && transfer_failed=true
3052
3053	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3054	# LOKALER MASCHINE ANLEGEN
3055	if [[ $transfer_failed = true ]]
3056	then
3057	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3058	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3059
3060	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3061	# ANLEGEN
3062	eval local_catalog=${pathout[$i]}
3063	if [[ ! -d $local_catalog ]]
3064	then
3065	printf " *** local directory does not exist. Trying to create:\n"
3066	printf " $local_catalog \n"
3067	mkdir -p $local_catalog
3068	fi
3069
3070	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3071	transfer_problems=true
3072	fi
3073	fi
3074	else
3075
3076	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3077	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3078	actionout[$i]=a
3079	fi
3080	fi
3081
3082
3083	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3084	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3085	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3086	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3087	if [[ "${actionout[$i]}" = fl ]]
3088	then
3089	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3090	chmod g+rx $tmp_data_catalog
3091	if [[ $files_for_pes = false ]]
3092	then
3093	printf "\n >>> OUTPUT: ${localout[$i]} to"
3094	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3095	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3096	else
3097	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3098	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3099	mkdir $tmp_data_catalog/${frelout[$i]}
3100	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3101	fi
3102
3103
3104	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3105	if [[ $store_on_archive_system = true ]]
3106	then
3107
3108	if [[ $archive_system = asterix ]]
3109	then
3110	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3111	if [[ $files_for_pes = false ]]
3112	then
3113	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3114	else
3115	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3116	fi
3117	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3118	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3119	echo "then" >> archive_${frelout[$i]}
3120	echo " do_stageout=false" >> archive_${frelout[$i]}
3121	echo "else" >> archive_${frelout[$i]}
3122	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3123	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3124	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3125	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3126	if [[ $files_for_pes = false ]]
3127	then
3128	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3129	else
3130	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3131	fi
3132	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3133	echo "fi" >> archive_${frelout[$i]}
3134	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3135	elif [[ $archive_system = DMF ]]
3136	then
3137	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3138	if [[ $files_for_pes = false ]]
3139	then
3140	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3141	locat=DMF
3142	exit
3143	else
3144	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3145	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3146	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3147	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3148	fi
3149	elif [[ $archive_system = tivoli ]]
3150	then
3151	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3152	if [[ $files_for_pes = false ]]
3153	then
3154	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3155	echo "set -x" >> archive_${frelout[$i]}
3156	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3157	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3158	else
3159
3160	echo "set -x" >> archive_${frelout[$i]}
3161	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3162	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3163	cd $tmp_data_catalog
3164	all_files=`ls -1 ${frelout[$i]}/*`
3165	cd - > /dev/null
3166	(( inode = 0 ))
3167	(( tp1 = tasks_per_node + 1 ))
3168	while (( inode < nodes ))
3169	do
3170	# echo "*** all_files = \"$all_files\" "
3171	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3172	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3173	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3174	# echo "*** files = \"$files\" "
3175	# echo "*** all_files = \"$all_files\" "
3176	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3177	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3178	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3179	(( inode = inode + 1 ))
3180	done
3181	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3182	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3183	fi
3184	elif [[ $archive_system = ut ]]
3185	then
3186	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3187	if [[ $files_for_pes = false ]]
3188	then
3189	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3190	echo "set -x" >> archive_${frelout[$i]}
3191	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3192	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3193	else
3194
3195	echo "set -x" >> archive_${frelout[$i]}
3196	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3197	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3198	cd $tmp_data_catalog
3199	all_files=`ls -1 ${frelout[$i]}/*`
3200	cd - > /dev/null
3201	(( inode = 0 ))
3202	(( tp1 = tasks_per_node + 1 ))
3203	while (( inode < nodes ))
3204	do
3205	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3206	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3207	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3208	(( inode = inode + 1 ))
3209	done
3210	fi
3211	elif [[ $archive_system = none ]]
3212	then
3213	printf " +++ archiving on $localhost not available!\n"
3214	fi
3215
3216	if [[ $archive_system != none ]]
3217	then
3218	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3219	then
3220	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3221	subjob -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3222	elif [[ $localhost = nech ]]
3223	then
3224	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3225	fi
3226	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3227	fi
3228	else
3229	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3230	fi
3231
3232
3233	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3234	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3235	if [[ $files_for_pes = false ]]
3236	then
3237	cat /dev/null > ${pathout[$i]}
3238	else
3239	mkdir -p ${pathout[$i]}
3240	fi
3241
3242	fi
3243
3244
3245	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3246	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3247	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3248	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3249	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3250	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3251	if [[ "${actionout[$i]}" = ar ]]
3252	then
3253	if [[ $files_for_pes = false ]]
3254	then
3255	printf "\n >>> OUTPUT: ${localout[$i]} to"
3256	printf "\n ${pathout[$i]}"
3257	printf "\n File will be copied to archive-system ($archive_system) !\n"
3258	else
3259	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3260	printf "\n ${pathout[$i]}"
3261	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3262	fi
3263	mv ${localout[$i]} ${frelout[$i]}
3264
3265	file_saved=false
3266
3267	if [[ $archive_system = asterix ]]
3268	then
3269	do_stageout=true
3270	(( stageout_anz = 0 ))
3271	while [[ $do_stageout = true ]]
3272	do
3273	if [[ $files_for_pes = false ]]
3274	then
3275	stageout ${frelout[$i]} > STAGE_OUTPUT
3276	else
3277	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3278	fi
3279	cat STAGE_OUTPUT
3280	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3281	then
3282	file_saved=true
3283	do_stageout=false
3284	else
3285	if [[ $files_for_pes = false ]]
3286	then
3287	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3288	else
3289	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3290	fi
3291	(( stageout_anz = stageout_anz + 1 ))
3292	if (( stageout_anz == 10 ))
3293	then
3294	printf "\n +++ stoped after 10 unsuccessful tries!"
3295	archive_save=false
3296	do_stageout=false
3297	else
3298	printf "\n *** new try to store on archive after 15 min:"
3299	sleep 900
3300	fi
3301	fi
3302	done
3303	elif [[ $archive_system = DMF ]]
3304	then
3305	if [[ $files_for_pes = false ]]
3306	then
3307	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3308	locat=DMF
3309	exit
3310	else
3311	rm -rf $ARCHIVE/${frelout[$i]}
3312	cp -r ${frelout[$i]} $ARCHIVE
3313	fi
3314	file_saved=true
3315	elif [[ $archive_system = tivoli ]]
3316	then
3317	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3318	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3319	# GELEGT WERDEN
3320	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3321	chmod g+rx $tmp_data_catalog
3322	if [[ $files_for_pes = false ]]
3323	then
3324	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3325	else
3326	mkdir $tmp_data_catalog/${frelout[$i]}
3327	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3328	fi
3329
3330	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3331	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3332	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3333	if [[ $files_for_pes = false ]]
3334	then
3335	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3336	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3337	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3338	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3339	else
3340	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3341	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3342	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3343	fi
3344
3345	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3346	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3347	file_saved=true
3348
3349	elif [[ $archive_system = ut ]]
3350	then
3351	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3352	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3353	# GELEGT WERDEN
3354	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3355	chmod g+rx $tmp_data_catalog
3356	if [[ $files_for_pes = false ]]
3357	then
3358	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3359	else
3360	mkdir $tmp_data_catalog/${frelout[$i]}
3361	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3362	fi
3363
3364	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3365	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3366	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3367	if [[ $files_for_pes = false ]]
3368	then
3369	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3370	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3371	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3372	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3373	else
3374	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3375	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3376	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3377	fi
3378
3379	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3380	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3381	file_saved=true
3382
3383	else
3384	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3385	archive_save=false
3386	fi
3387	if [[ $file_saved = true ]]
3388	then
3389	if [[ $files_for_pes = false ]]
3390	then
3391	cat /dev/null > ${pathout[$i]}
3392	else
3393	mkdir -p ${pathout[$i]}
3394	fi
3395	fi
3396	fi
3397
3398	# APPEND AUF LOKALER MASCHINE
3399	if [[ "${actionout[$i]}" = "a" ]]
3400	then
3401	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3402	cat ${localout[$i]} >> ${pathout[$i]}
3403	fi
3404
3405	# KOPIEREN AUF LOKALER MASCHINE
3406	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3407	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3408	then
3409
3410	# KOPIEREN AUF EINPROZESSORMASCHINE
3411	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3412	then
3413	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3414	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3415	else
3416	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3417	cp ${localout[$i]} ${pathout[$i]}
3418	fi
3419
3420	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3421	then
3422
3423	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3424	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3425	# WIRD DANN KOPIERT
3426	# PER MOVE UMBENANNT WERDEN
3427	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3428	cp -r ${localout[$i]} ${pathout[$i]}
3429
3430	fi
3431	fi
3432	done
3433	if (( i != 0 ))
3434	then
3435	if [[ $transfer_problems = true ]]
3436	then
3437	printf "\n$striche\n *** OUTPUT-files saved"
3438	printf "\n +++ WARNING: some data transfers failed! \n"
3439	else
3440	printf "\n$striche\n *** all OUTPUT-files saved \n"
3441	fi
3442	fi
3443
3444
3445	# EVENTUELL FOLGEJOB STARTEN
3446	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3447	if [[ -f CONTINUE_RUN ]]
3448	then
3449
3450	if [[ $archive_save = true ]]
3451	then
3452
3453	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3454	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3455	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3456	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3457	# HANDEN
3458	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3459	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3460	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3461	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3462	then
3463	mc=`echo $mc \| sed 's/#/f/g'`
3464	fi
3465
3466
3467	# JOB STARTEN
3468	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3469	echo " $mc"
3470	printf "\n$striche\n"
3471	if [[ $localhost != $fromhost ]]
3472	then
3473
3474	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3475	then
3476	echo "*** ssh will be used to initiate restart-runs!"
3477	echo " return_addres=\"$return_addres\" "
3478	echo " return_username=\"$return_username\" "
3479	if [[ $return_addres = 172.20.25.41 ]]
3480	then
3481	# WORKAROUND AUF SCIROCCO AM TIT
3482	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3483	else
3484	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3485	fi
3486	else
3487	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3488	locat=restart; exit
3489	fi
3490
3491	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3492	# DER AKTUELLE JOB ENDET
3493	sleep 30
3494
3495	else
3496
3497	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3498	# RUFEN WERDEN, AUSSER AUF lcfimm
3499	cd $LOCAL_PWD
3500	if [[ $localhost = lcfimm ]]
3501	then
3502	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3503	else
3504	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3505	fi
3506	cd - > /dev/null
3507	fi
3508	printf "\n$striche\n *** restart-run initiated \n"
3509
3510
3511	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3512	# GEHOLT WORDEN SIND, LOESCHEN
3513	(( i = 0 ))
3514	while (( i < iin ))
3515	do
3516	(( i = i + 1 ))
3517	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3518	then
3519	rm -r $tmp_data_catalog/${frelin[$i]}
3520	fi
3521	done
3522
3523	else
3524
3525	printf "\n +++ no restart-run possible, since errors occured"
3526	printf "\n during the archive process"
3527	fi
3528
3529	fi
3530
3531
3532
3533	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3534	if [[ "$email_notification" != "" ]]
3535	then
3536
3537	if [[ $localhost != $fromhost ]]
3538	then
3539	if [[ -f CONTINUE_RUN ]]
3540	then
3541	echo "PALM restart run necessary" > email_text
3542	echo "description header of actual run:" >> email_text
3543	cat CONTINUE_RUN >> email_text
3544	echo "mrun-command to restart:" >> email_text
3545	echo "$mc" >> email_text
3546	else
3547	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3548	fi
3549	mail $email_notification < email_text
3550	printf "\n *** email notification sent to \"$email_notification\" "
3551	fi
3552	fi
3553
3554
3555
3556	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3557	cd $HOME
3558	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3559
3560	else
3561
3562
3563	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3564	# CHENDE AKTIONEN DURCHGEFUEHRT
3565
3566	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3567	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3568	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3569	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3570	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
3571	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3572	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3573	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3574	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3575	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3576	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3577	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3578	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3579	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3580	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3581	if [[ $use_openmp = true ]]
3582	then
3583	mrun_com=${mrun_com}" -O"
3584	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3585	else
3586	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3587	fi
3588	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3589	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3590	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3591	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3592	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
3593	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3594	if [[ $do_remote = true ]]
3595	then
3596	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3597	fi
3598
3599
3600	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3601	jobfile=jobfile.$RANDOM
3602
3603
3604	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3605	echo "mkdir $TEMPDIR" >> $jobfile
3606	echo "cd $TEMPDIR" >> $jobfile
3607
3608
3609	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3610	if [[ $do_trace = true ]]
3611	then
3612	echo "set -x" >> $jobfile
3613	else
3614	echo "set +vx" >> $jobfile
3615	fi
3616
3617
3618	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3619	# SOWIE GEGEBENENFALLS DES MAKEFILES
3620	if [[ $do_compile = true ]]
3621	then
3622
3623	source_catalog=SOURCES_FOR_RUN_$fname
3624
3625	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3626	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3627	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3628	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3629	echo "export SOURCES_COMPLETE=true" >> $jobfile
3630	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3631
3632	for filename in $source_list
3633	do
3634	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3635	echo "cat > $filename << \"%END%\"" >> $jobfile
3636	cat $source_catalog/$filename >> $jobfile
3637	echo " " >> $jobfile
3638	echo "%END%" >> $jobfile
3639	echo " " >> $jobfile
3640	done
3641
3642	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3643	echo "cat > Makefile << \"%END%\"" >> $jobfile
3644	cat $source_catalog/Makefile >> $jobfile
3645	echo " " >> $jobfile
3646	echo "%END%" >> $jobfile
3647	echo " " >> $jobfile
3648
3649	echo "cd - > /dev/null" >> $jobfile
3650
3651	fi
3652
3653
3654	# ABSPEICHERN DER KONFIGURATIONSDATEI
3655	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3656	echo "cat > $config_file << \"%END%\"" >> $jobfile
3657	cat $config_file >> $jobfile
3658	echo "%END%" >> $jobfile
3659	echo " " >> $jobfile
3660
3661
3662	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3663	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3664	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3665	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3666	echo "%END%" >> $jobfile
3667	if [[ $host = lctit ]]
3668	then
3669	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3670	echo "mv mrun_new $mrun_script_name" >> $jobfile
3671	fi
3672	echo "chmod u+x $mrun_script_name" >> $jobfile
3673	echo "execute_mrun=true" >> $jobfile
3674	echo " " >> $jobfile
3675
3676	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3677	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3678	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3679	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3680	if [[ $do_remote = true ]]
3681	then
3682	(( i = 0 ))
3683	while (( i < iin ))
3684	do
3685	(( i = i + 1 ))
3686	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3687	if [[ "${transin[$i]}" = job ]]
3688	then
3689	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3690	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3691	echo " " >> $jobfile
3692	echo "%END%" >> $jobfile
3693	else
3694	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3695	fi
3696
3697	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3698	echo "if [[ \$? = 1 ]]" >> $jobfile
3699	echo "then" >> $jobfile
3700	echo " echo \" \" " >> $jobfile
3701	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3702	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3703	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3704	echo " execute_mrun=false" >> $jobfile
3705	echo "fi" >> $jobfile
3706	done
3707	fi
3708
3709	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3710	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3711	echo "LOCAL_PWD=$working_directory" >> $jobfile
3712	echo "export LOCAL_PWD" >> $jobfile
3713
3714	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3715	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3716	echo "export LOCAL_MRUN_PATH" >> $jobfile
3717
3718	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3719	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3720	then
3721	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3722	fi
3723
3724	# MRUN AUF ZIELRECHNER AUFRUFEN
3725	echo "set -x" >> $jobfile
3726	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3727
3728	echo 'ls -al; echo `pwd`' >> $jobfile
3729	echo "cd \$HOME" >> $jobfile
3730	echo "rm -rf $TEMPDIR" >> $jobfile
3731
3732
3733
3734
3735	# JOB PER SUBJOB STARTEN
3736	if [[ $silent = false ]]
3737	then
3738	printf "\n "
3739	else
3740	printf "\n\n"
3741	fi
3742
3743	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v $jobfile
3744	rm -rf $jobfile
3745
3746
3747	fi # ENDE REMOTE-TEIL
3748
3749
3750
3751	# ENDE DER PROZEDUR

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