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source: palm/trunk/SCRIPTS/mrun @ 120

Last change on this file since 120 was 118, checked in by raasch, 17 years ago
preliminary adjustments for mrun and mbuild to tsubame
Property svn:keywords set to `Rev`
File size: 139.1 KB

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1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134
135
136	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
137
138	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
139	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
140	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
141
142	AddFilenames=""
143	additional_conditions=""
144	add_source_path=""
145	afname=""
146	archive_save=true
147	archive_system=none
148	compiler_name=""
149	cond1=""
150	cond2=""
151	config_file=.mrun.config
152	cpp_opts=""
153	cpp_options=""
154	cpumax=0
155	cpurest=0
156	delete_temporary_catalog=true
157	do_batch=false
158	do_compile=true
159	do_remote=false
160	do_stagein=true
161	do_stageout=true
162	do_trace=false
163	email_notification=""
164	exclude=""
165	executable=""
166	execution_error=false
167	fimm=false
168	fname=test
169	fromhost=""
170	global_revision=""
171	host=""
172	host_file=""
173	hp=""
174	ignore_archive_error=false
175	input_list=""
176	interpreted_config_file=""
177	job_on_file=""
178	keep_data_from_previous_run=false
179	localhost_realname=$(hostname)
180	local_compile=false
181	locat=normal
182	mainprog=""
183	makefile=""
184	mc=$0
185	while [[ $(echo $mc \| grep -c "/") != 0 ]]
186	do
187	mc=`echo $mc \| cut -f2- -d"/"`
188	done
189	module_files=""
190	mrun_script_name=$mc
191	netcdf_inc=""
192	netcdf_lib=""
193	netcdf_support=false
194	node_usage=default
195	numprocs=""
196	OOPT=""
197	openmp=false
198	output_list=""
199	package_list=""
200	punkte="..........................................................."
201	queue=none
202	read_from_config=""
203	restart_run=false
204	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
205	if [[ $return_addres = 130.75.105.158 ]]
206	then
207	return_addres=172.20.25.41
208	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
209	fi
210	# if [[ $return_addres = 210.117.65.1 ]]
211	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
212	# then
213	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
214	# fi
215	return_password=""
216	return_username=$LOGNAME
217	remotecall=false
218	remote_username=""
219	run_coupled_model=false
220	run_mode=""
221	scirocco=false
222	store_on_archive_system=true
223	striche=" ----------------------------------------------------------------------------"
224	silent=false
225	source_list=""
226	source_path=SOURCE
227	tasks_per_node=""
228	threads_per_task=1
229	tmpcreate=false
230	tmp_data_catalog=""
231	transfer_problems=false
232	usern=$LOGNAME
233	working_directory=`pwd`
234	TOPT=""
235	XOPT=""
236	zeit=$( date \| cut -c 12-19 )
237
238	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
239	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
240
241	typeset -R30 calltime
242	typeset -L20 spalte1
243	typeset -L40 spalte2
244	typeset -L60 spalte3
245	typeset -L35 string1=`date`
246	typeset -L12 string2=$usern
247	typeset -L12 string3=$localhost_realname
248	typeset -L12 string4
249	typeset -L12 string5
250	typeset -L30 version="MRUN 2.0 Rev$Rev: 118 $"
251
252
253
254	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
255	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
256
257	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
258	# EXPORTIERT WERDEN
259	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
260	export input_list memory numprocs output_list queue run_mode
261
262
263
264	# FEHLERBEHANDLUNG
265	# BEI EXIT:
266	trap 'rm -rf $working_directory/tmp_mrun
267	if [[ $locat != localhost ]]
268	then
269	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
270	# then
271	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
272	#MRUN-calls on $localhost
273	#
274	#date and time user localhost remotehost termination mrun-command
275	#--------------------------------------------------------------------------------------------------------------------
276	#%STATEND%
277	# chmod 666 ${mrun_path}/statistik/mrun_statistik
278	# fi
279	#
280	# # EINTRAG IN DIE STATISTIK-DATEI
281	# string4=$host
282	# string5=$locat
283	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
284	# then
285	# if [[ $do_batch = true ]]
286	# then
287	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
288	# else
289	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
290	# fi
291	# fi
292	echo " " > /dev/null
293	fi
294
295	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
296	then
297
298	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
299	(( i = 0 ))
300	while (( i < iec ))
301	do
302	(( i = i + 1 ))
303	printf "\n *** Execution of ERROR-command:\n"
304	printf " >>> ${err_command[$i]}\n"
305	eval ${err_command[$i]}
306	done
307	if [[ -n $interpreted_config_file ]] then
308	rm -rf $interpreted_config_file
309	fi
310	if [[ -n .mrun_environment ]] then
311	rm -rf .mrun_environment
312	fi
313	if [[ $tmpcreate = true ]]
314	then
315	printf "\n *** Contents of \"$TEMPDIR\":\n"
316	ls -al; cd
317	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
318	fi
319	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
320	then
321	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
322	fi
323	printf "\n\n+++ MRUN killed \n\n"
324	elif [[ $locat != control_c ]]
325	then
326	printf "\n\n --> all actions finished\n\n"
327	printf " Bye, bye $usern !!\n\n"
328	fi' exit
329
330
331	# BEI TERMINAL-BREAK:
332	trap 'rm -rf $working_directory/tmp_mrun
333	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
334	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
335	then
336	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
337	fi
338	printf "\n+++ MRUN killed by \"^C\" \n\n"
339	locat=control_c
340	exit
341	' 2
342
343
344	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
345	# BEEN SET
346	if [[ "$PALM_BIN" = "" ]]
347	then
348	printf "\n +++ environment variable PALM_BIN has not been set"
349	printf "\n please set it to the directory where the PALM scripts are located"
350	locat=palm_bin; exit
351	fi
352
353
354
355	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
356	# FUER FOLGEJOBS BENOETIGT WIRD
357	while getopts :a:AbBc:Cd:D:FG:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
358	do
359	case $option in
360	(a) afname=$OPTARG;;
361	(A) store_on_archive_system=false; mc="$mc -A";;
362	(b) do_batch=true; mc="$mc -b";;
363	(B) delete_temporary_catalog=false; mc="$mc -B";;
364	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
365	(C) restart_run=true; mc="$mc -C";;
366	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
367	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
368	(F) job_on_file="-D"; mc="$mc -F";;
369	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
370	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
371	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
372	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
373	(I) ignore_archive_error=true; mc="$mc -I";;
374	(k) keep_data_from_previous_run=true; mc="$mc -k";;
375	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
376	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
377	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
378	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
379	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
380	(O) use_openmp=true; mc="$mc -O";;
381	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
382	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
383	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
384	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
385	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
386	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
387	(S) read_from_config=false; mc="$mc -S";;
388	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
389	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
390	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
391	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
392	(v) silent=true; mc="$mc -v";;
393	(x) do_trace=true;set -x; mc="$mc -x";;
394	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
395	(Y) run_coupled_model=true; mc="$mc -Y";;
396	(\?) printf "\n +++ unknown option $OPTARG \n"
397	printf "\n --> type \"$0 ?\" for available options \n"
398	locat=parameter;exit;;
399	esac
400	done
401
402
403	# EVTL. POSITIONSPARAMETER EINLESEN
404	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
405	shift OPTIND-1
406
407
408	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
409	if [[ "$1" = "?" ]]
410	then
411	(printf "\n *** mrun can be called as follows:\n"
412	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
413	printf "\n Description of available options:\n"
414	printf "\n Option Description Default-Value"
415	printf "\n -a base name of input files equiv. -d"
416	printf "\n -A no archiving when using file-attribute fl"
417	printf "\n -b batch-job on local machine ---"
418	printf "\n -B do not delete temporary directory at end ---"
419	printf "\n -c configuration file .mrun.config"
420	printf "\n -d base name of files attached to program test"
421	printf "\n -D preprocessor(cpp)-directives \"\" "
422	printf "\n -F create remote job file only ---"
423	printf "\n -h execution host $localhost_realname"
424	printf "\n -i INPUT control list \"\" "
425	printf "\n -I archiving errors of previous batch-jobs"
426	printf "\n will be ignored"
427	printf "\n -k keep data from previous run"
428	printf "\n -K additional conditions for controling"
429	printf "\n usage of conditional code and"
430	printf "\n env-variables in configuration file \"\" "
431	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
432	printf "\n -M Makefile name Makefile"
433	printf "\n -n node usage (shared/not_shared) depending on -h"
434	printf "\n -o OUTPUT control list \"\" "
435	printf "\n -O use OpenMP ---"
436	printf "\n -p software package list \"\" "
437	printf "\n -q queue \"$queue\" "
438	printf "\n -r run control list (combines -i -o) \"\" "
439	printf "\n -s filenames of routines to be compiled \"\" "
440	printf "\n must end with .f, .f90, .F, or .c !"
441	printf "\n use \"..\" for more than one file and wildcards"
442	printf "\n -s TEST compiles all files with w-permit"
443	printf "\n -S config file interpreted by shellscript ---"
444	printf "\n -t allowed cpu-time in seconds (batch) 0"
445	printf "\n -T tasks per node depending on -h"
446	printf "\n -u username on remote machine \"\" "
447	printf "\n -v no prompt for confirmation ---"
448	printf "\n -x tracing of mrun for debug purposes ---"
449	printf "\n -X # of processors (on parallel machines) 1"
450	printf "\n -Y run coupled model ---"
451	printf "\n "
452	printf "\n Possible values of positional parameter <modus>:"
453	printf "\n \"?\" - this outline \n\n") \| more
454	exit
455	elif [[ "$1" != "" ]]
456	then
457	printf "\n +++ positional parameter $1 unknown \n"
458	locat=parameter; exit
459	fi
460
461
462
463	# KURZE STARTMELDUNG
464	printf "\n*** $version "
465	printf "\n will be executed. Please wait ..."
466
467
468
469	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
470	if [[ ! -f $config_file ]]
471	then
472	printf "\n\n +++ configuration file: "
473	printf "\n $config_file"
474	printf "\n does not exist"
475	locat=connect; exit
476	fi
477
478
479	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
480	line=""
481	grep "%host_identifier" $config_file > tmp_mrun
482	while read line
483	do
484	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
485	then
486	HOSTNAME=`echo $line \| cut -d" " -s -f2`
487	host_identifier=`echo $line \| cut -d" " -s -f3`
488	if [[ $localhost_realname = $HOSTNAME ]]
489	then
490	localhost=$host_identifier
491	break
492	fi
493	fi
494	done < tmp_mrun
495
496	if [[ "$localhost" = "" ]]
497	then
498	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
499	printf "\n for local host \"$localhost_realname\"."
500	printf "\n Please add line"
501	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
502	printf "\n to the configuration file."
503	locat=localhost; exit
504	fi
505
506
507
508	# HOSTSPEZIFISCHE VARIABLEN SETZEN
509	case $localhost_realname in
510	(breg-en0\|berni-en0) archive_system=tivoli;;
511	(cs*) archive_system=ut;;
512	(fimm.bccs.uib.no) fimm=true;;
513	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
514	(hreg-en0\|hanni-en0) archive_system=tivoli;;
515	(scirocco) scirocco=true;;
516	esac
517
518
519
520	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
521	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
522	[[ "$afname" = "" ]] && afname=$fname
523
524
525	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
526	if [[ "$run_mode" != "" ]]
527	then
528	input_list="$input_list $run_mode"
529	output_list="$output_list $run_mode"
530	fi
531
532
533	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
534	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
535	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
536	# STARTET)
537	if [[ "$fromhost" = "" ]]
538	then
539	fromhost=$localhost
540	fi
541
542
543	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
544	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
545	then
546	source_list=TEST
547	local_compile=true
548	host=$localhost
549	fi
550
551
552	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
553	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
554	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
555	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
556	if [[ -n $host && "$host" != $localhost ]]
557	then
558	do_batch=true
559	do_remote=true
560	case $host in
561	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
562	(*) printf "\n"
563	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
564	printf "\n is not available"
565	locat=nqs; (( iec = 0 )); exit;;
566	esac
567	else
568	host=$localhost
569	fi
570
571
572	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
573	if [[ -n $additional_conditions ]]
574	then
575	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
576	cond1=`echo $additional_conditions \| cut -d" " -f1`
577	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
578	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
579	if [[ -n $dummy ]]
580	then
581	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
582	locat=options; exit
583	fi
584	fi
585
586
587	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
588	# ARCHIVIERUNG FEHLGESCHLAGEN IST
589	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
590	then
591	if [[ $ignore_archive_error = false ]]
592	then
593	printf "\n +++ data archiving of previous run failed"
594	printf "\n see directory \~/job_queue on remote machine"
595	locat=archive; exit
596	else
597	printf "\n +++ warning: data archiving in a previous run failed"
598	printf "\n MRUN continues, trying to get backup copy"
599	fi
600	fi
601
602
603
604	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
605	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
606	if [[ "$read_from_config" = false ]]
607	then
608
609	[[ $silent = false ]] && printf "\n Reading the configuration file... "
610	while read zeile
611	do
612	[[ $silent = false ]] && printf "."
613
614
615	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
616	# ERSETZEN
617	eval zeile=\"$zeile\"
618
619
620	# INTERPRETATION DER ZEILE
621	if [[ "$(echo $zeile)" = "" ]]
622	then
623	# LEERZEILE, KEINE AKTION
624	continue
625
626	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
627	then
628
629	# ZEILE IST KOMMENTARZEILE
630	true
631
632	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
633	then
634
635	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
636	zeile=$(echo $zeile \| cut -c2-)
637	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
638	var=`echo $zeile \| cut -d" " -f1`
639	value=`echo $zeile \| cut -d" " -s -f2`
640	for_host=`echo $zeile \| cut -d" " -s -f3`
641	for_cond1=`echo $zeile \| cut -d" " -s -f4`
642	for_cond2=`echo $zeile \| cut -d" " -s -f5`
643
644	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
645	then
646
647	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
648	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
649	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
650
651
652	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
653	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
654	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
655	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
656	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
657	# KONFIGURATIONSDATEI
658	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
659	then
660	eval $var=\$value
661
662	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
663	if [[ $do_trace = true ]]
664	then
665	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
666	fi
667	fi
668
669	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
670	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
671	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
672	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
673	if [[ $var = host ]]
674	then
675	if [[ -n $host && "$host" != $localhost ]]
676	then
677	do_batch=true
678	do_remote=true
679	case $host in
680	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
681	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
682	printf "\n is not available"
683	locat=nqs; exit;;
684	esac
685	else
686	host=$localhost
687	fi
688	fi
689
690	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
691	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
692	# DEN PROGRAMMEN BENOETIGT WERDEN
693	export $var
694	fi
695
696
697
698
699	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
700	then
701
702	# ZEILE DEFINIERT ERROR-KOMMANDO
703	(( iec = iec + 1 ))
704	zeile=$(echo $zeile \| cut -c4-)
705	err_command[$iec]="$zeile"
706
707	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
708	then
709
710	# ZEILE DEFINIERT INPUT-KOMMANDO
711	(( iic = iic + 1 ))
712	zeile=$(echo $zeile \| cut -c4-)
713	in_command[$iic]="$zeile"
714
715	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
716	then
717
718	# ZEILE DEFINIERT OUTPUT-KOMMANDO
719	(( ioc = ioc + 1 ))
720	zeile=$(echo $zeile \| cut -c4-)
721	out_command[$ioc]="$zeile"
722
723	else
724
725	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
726	# s2a: in/out - Feld
727	# s2b: loc - Feld (optional)
728	# s2c: tr/ar - Feld (optional)
729	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
730	s1=`echo $zeile \| cut -d" " -f1`
731	s2=`echo $zeile \| cut -d" " -s -f2`
732	s2a=$(echo $s2 \| cut -d":" -f1)
733	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
734	then
735	s2b=""
736	s2c=""
737	else
738	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
739	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
740	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
741	fi
742	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
743	s3=`echo $zeile \| cut -d" " -f3`
744	s4=`echo $zeile \| cut -d" " -s -f4`
745	s5=`echo $zeile \| cut -d" " -s -f5`
746	s6=`echo $zeile \| cut -d" " -s -f6`
747
748
749	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
750	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
751	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
752	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
753	# HANDEN SEIN MUSS (D.H. s2b = loc)
754	IFSALT="$IFS"; IFS="$IFS:"
755	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
756	then
757	found=false
758	for actual in $input_list
759	do
760	for formal in $s3
761	do
762	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
763	done
764	done
765	if [[ $found = true ]]
766	then
767	(( iin = iin + 1 ))
768	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
769	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
770	extin[$iin]=$s6
771	fi
772	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
773	then
774	found=false
775	for actual in $output_list
776	do
777	for formal in $s3
778	do
779	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
780	done
781	done
782	if [[ $found = true ]]
783	then
784	(( iout = iout + 1 ))
785	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
786	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
787	fi
788	elif [[ "$s2a" != in && "$s2a" != out ]]
789	then
790	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
791	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
792	locat=connect; exit
793	fi
794	IFS="$IFSALT"
795	fi
796	done < $config_file
797
798	else
799
800
801	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
802	[[ $silent = false ]] && printf "..."
803	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
804	export interpreted_config_file=.icf.$RANDOM
805
806
807
808	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
809	# VERFUEGUNG STELLEN
810	cat > .mrun_environment << %%END%%
811	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
812	config_file = '$config_file', do_remote = '$do_remote',
813	do_trace = '$do_trace', host = '$host',
814	input_list = '$input_list', icf = '$interpreted_config_file',
815	localhost = '$localhost', output_list = '$output_list' /
816
817	%%END%%
818
819	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
820	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
821	mrun_memory=$memory
822	mrun_cpumax=$cpumax
823	mrun_numprocs=$numprocs
824
825	if [[ $localhost_realname = "gate" ]]
826	then
827	interpret_config_gate.x
828	else
829	interpret_config.x
830	fi
831	rm .mrun_environment
832
833
834	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
835	chmod u+x $interpreted_config_file
836	export PATH=$PATH:.
837	. $interpreted_config_file
838	rm $interpreted_config_file
839
840
841	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
842	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
843	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
844	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
845
846	fi
847
848
849	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
850	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
851	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
852	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
853	if [[ "$SOURCES_COMPLETE" = "" ]]
854	then
855
856	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
857	# VEREINBART WURDE
858	source_path=""
859	line=""
860	grep "%source_path" $config_file > tmp_mrun
861	while read line
862	do
863	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
864	then
865	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
866	then
867	global_source_path=`echo $line \| cut -d" " -f2`
868	fi
869	fi
870	done < tmp_mrun
871
872	line=""
873	found=false
874	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
875	while read line
876	do
877	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
878	then
879	if [[ $found = true ]]
880	then
881	printf "\n\n +++ more than one source path found in configuration file"
882	printf "\n for local host \"$localhost\" "
883	locat=source_path; exit
884	fi
885	source_path=`echo $line \| cut -d" " -f2`
886	found=true
887	fi
888	done < tmp_mrun
889	rm tmp_mrun
890
891	if [[ "$source_path" = "" ]]
892	then
893	if [[ "$global_source_path" != "" ]]
894	then
895	source_path=$global_source_path
896	else
897	printf "\n\n +++ no source path found in configuration file"
898	printf "\n for local host \"$localhost\" "
899	locat=source_path; exit
900	fi
901	fi
902	eval source_path=$source_path
903
904	if [[ ! -d $source_path ]]
905	then
906	printf "\n\n +++ source path \"$source_path\" on local host"
907	printf "\n \"$localhost\" does not exist"
908	locat=source_path; exit
909	fi
910
911	fi
912
913
914	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
915	# DURCH OPTION -G MITGETEILT)
916	if [[ "$global_revision" = "" ]]
917	then
918	global_revision=`svnversion $source_path 2>/dev/null`
919	global_revision="Rev: $global_revision"
920	fi
921
922
923	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
924	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
925	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
926	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
927	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
928	if [[ -n $host && "$host" != $localhost ]]
929	then
930	do_batch=true
931	do_remote=true
932	case $host in
933	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
934	(*) printf "\n"
935	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
936	printf "\n is not available"
937	locat=nqs; (( iec = 0 )); exit;;
938	esac
939	else
940	host=$localhost
941	fi
942
943
944	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
945	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
946	then
947
948	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
949	if [[ ! -n $numprocs ]]
950	then
951	printf "\n"
952	printf "\n +++ option \"-K parallel\" requires additional specification"
953	printf "\n of the number of processors to be used by"
954	printf "\n mrun-option \"-X\" or by environment-variable"
955	printf "\n \"numprocs\" in the configuration file"
956	locat=numprocs; (( iec = 0 )); exit
957	fi
958
959	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
960	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
961	# GESAMTPROZESSORANZAHL IST
962	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
963	then
964	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
965	(( ival = $tasks_per_node ))
966	(( pes = numprocs ))
967	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
968	# then
969	# (( pes = pes - 1 ))
970	# fi
971	(( ii = pes / ival ))
972	if (( pes - ii * ival > 0 ))
973	then
974	printf "\n"
975	printf "\n +++ tasks per node (option \"-T\") must be an integral"
976	printf "\n divisor of the total number of processors (option \"-X\")"
977	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
978	locat=tasks_per_node; (( iec = 0 )); exit
979	fi
980	fi
981
982	# IBMY HAT NUR EINEN KNOTEN
983	if [[ $host = ibmy ]]
984	then
985	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
986	then
987	printf "\n"
988	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
989	printf "\n total number of processors (option \"-X\")"
990	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
991	locat=tasks_per_node; (( iec = 0 )); exit
992	fi
993	fi
994
995	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
996	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
997	if [[ $use_openmp = true ]]
998	then
999	threads_per_task=$tasks_per_node
1000	tasks_per_node=1
1001	fi
1002	OOPT="-O $threads_per_task"
1003	TOPT="-T $tasks_per_node"
1004
1005	# GESAMTZAHL DER KNOTEN BESTIMMEN
1006	if [[ "$tasks_per_node" != "" ]]
1007	then
1008	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1009	fi
1010
1011	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1012	# SETZEN
1013	if [[ $node_usage = default ]]
1014	then
1015	if [[ $host = ibms ]]
1016	then
1017	node_usage=shared
1018	elif [[ $host = lctit ]]
1019	then
1020	node_usage=sla3
1021	else
1022	node_usage=not_shared
1023	fi
1024	fi
1025	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != sla3 ]]
1026	then
1027	printf "\n"
1028	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1029	printf "\n \"shared\" or \"not_shared\""
1030	locat=tasks_per_node; (( iec = 0 )); exit
1031	fi
1032
1033	fi
1034
1035	# PRUEFEN, OB HOSTFILE EXISTIERT
1036	if [[ -n $hostfile ]]
1037	then
1038	if [[ ! -f $hostfile ]]
1039	then
1040	printf "\n"
1041	printf "\n +++ hostfile \"$hostfile\" does not exist"
1042	locat=hostfile; exit
1043	fi
1044	fi
1045
1046	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1047	if [[ $host = ibmy && $do_remote = false ]]
1048	then
1049	if [[ ! -f $HOME/.rhosts ]]
1050	then
1051	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1052	printf "\n\n *** file:"
1053	printf "\n $HOME/.rhosts"
1054	printf "\n was created\n"
1055	fi
1056	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1057	then
1058	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1059	printf "\n\n *** file:"
1060	printf "\n $HOME/.rhosts"
1061	printf "\n was extended by the name of the current host\n"
1062	fi
1063	fi
1064
1065
1066
1067	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1068	if [[ $queue = none ]]
1069	then
1070	case $host in
1071	(ibmb) if [[ $node_usage = shared ]]
1072	then
1073	queue=cshare
1074	else
1075	queue=csolo
1076	fi;;
1077	(ibmh) if [[ $node_usage = shared ]]
1078	then
1079	queue=cshare
1080	else
1081	queue=csolo
1082	fi;;
1083	(ibmy) queue=parallel;;
1084	(lctit) queue=;;
1085	(nech) queue=none;;
1086	(neck) queue=P;;
1087	(unics) queue=unics;;
1088	esac
1089	fi
1090
1091
1092	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1093	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1094	# ERMITTELN
1095	(( i = 0 ))
1096	while (( i < iin ))
1097	do
1098	(( i = i + 1 ))
1099	(( maxcycle = 0 ))
1100
1101	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1102	if [[ "${actionin[$i]}" = di ]]
1103	then
1104	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1105	# REM-MASCHINE AUSWERTEN
1106	eval filename=${pathin[$i]}/${endin[$i]}
1107	else
1108	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1109	# REM-MASCHINE AUSWERTEN
1110	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1111	fi
1112
1113	# PRUEFEN AUF VORHANDENSEIN
1114	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1115	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1116	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1117	then
1118	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1119	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1120	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1121	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1122	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1123	if [[ "${transin[$i]}" != "locopt" ]]
1124	then
1125	printf "\n\n +++ INPUT-file: "
1126	if [[ "${extin[$i]}" = "" ]]
1127	then
1128	printf "\n $filename"
1129	else
1130	printf "\n $filename.${extin[$i]}"
1131	fi
1132	printf "\n does not exist\n"
1133	locat=input; exit
1134	else
1135	transin[$i]="unavailable"
1136	fi
1137	else
1138
1139	# ZYKLUSNUMMER FESTSTELLEN
1140	ls -1 -d $filename > filelist 2>/dev/null
1141	ls -1 -d $filename.* >> filelist 2>/dev/null
1142	while read zeile
1143	do
1144	cycle=$(print $zeile \| cut -f2 -d".")
1145	if [[ "$cycle" = "$zeile" ]]
1146	then
1147	(( icycle = 0 ))
1148	elif [[ "$cycle" = "${extin[$i]}" ]]
1149	then
1150	(( icycle = 0 ))
1151	else
1152	(( icycle = $cycle ))
1153	fi
1154	if (( icycle > maxcycle ))
1155	then
1156	(( maxcycle = icycle ))
1157	file_to_be_used=$zeile
1158	fi
1159	done <filelist
1160	rm filelist
1161
1162	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1163	if (( maxcycle > 0 ))
1164	then
1165	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1166	then
1167	filename=${filename}.$maxcycle.${extin[$i]}
1168	else
1169	filename=${filename}.$maxcycle
1170	fi
1171	else
1172	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1173	then
1174	filename=${filename}.${extin[$i]}
1175	fi
1176	fi
1177
1178	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1179	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1180	absnamein[$i]=$filename
1181	if (( maxcycle > 0 ))
1182	then
1183	if [[ "${actionin[$i]}" = di ]]
1184	then
1185	frelin[$i]=${endin[$i]}.$maxcycle
1186	else
1187	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1188	fi
1189	else
1190	if [[ "${actionin[$i]}" = di ]]
1191	then
1192	frelin[$i]=${endin[$i]}
1193	else
1194	frelin[$i]=${afname}${endin[$i]}
1195	fi
1196	fi
1197
1198	fi
1199	done
1200
1201
1202	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1203	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1204	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1205	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1206	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1207	(( i = 0 ))
1208	while (( i < iout ))
1209	do
1210	(( i = i + 1 ))
1211	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1212	then
1213	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1214	then
1215	actionout[$i]=""
1216	elif [[ "${actionout[$i]}" = tra ]]
1217	then
1218	actionout[$i]=a
1219	fi
1220	(( maxcycle = 0 ))
1221	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1222	eval catalogname=${pathout[$i]}
1223	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1224	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1225	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1226	then
1227
1228	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1229	if cat /dev/null > $filename
1230	then
1231	rm $filename
1232	else
1233
1234	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1235	if [[ ! -d $catalogname ]]
1236	then
1237	if mkdir -p $catalogname
1238	then
1239	printf "\n\n *** directory:"
1240	printf "\n $catalogname"
1241	printf "\n was created\n"
1242	else
1243	printf "\n\n +++ OUTPUT-file:"
1244	printf "\n $filename"
1245	printf "\n cannot be created, because directory does not exist"
1246	printf "\n and cannot be created either"
1247	printf "\n"
1248	locat=output ; exit
1249	fi 2>/dev/null
1250	else
1251	printf "\n\n +++ OUTPUT-file:"
1252	printf "\n $filename"
1253	printf "\n cannot be created, although directory exists"
1254	printf "\n"
1255	locat=output ; exit
1256	fi
1257	fi 2>/dev/null
1258	else
1259
1260	# ZYKLUSNUMMER FESTSTELLEN
1261	ls -1 -d $filename > filelist 2>/dev/null
1262	ls -1 -d $filename.* >> filelist 2>/dev/null
1263	while read zeile
1264	do
1265	cycle=$(print $zeile \| cut -f2 -d".")
1266	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1267	then
1268	(( icycle = 1 ))
1269	else
1270	(( icycle = $cycle + 1 ))
1271	fi
1272	if (( icycle > maxcycle ))
1273	then
1274	(( maxcycle = icycle ))
1275	fi
1276	done <filelist
1277	rm filelist
1278	fi
1279
1280	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1281	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1282	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1283	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1284	if [[ "${actionout[$i]}" != a ]]
1285	then
1286	if (( maxcycle > 0 ))
1287	then
1288	filename=${filename}.$maxcycle
1289	if cat /dev/null > $filename
1290	then
1291	rm $filename
1292	else
1293	printf "\n +++ OUTPUT-file:"
1294	printf "\n $filename"
1295	printf "\n cannot be created"
1296	locat=output ; exit
1297	fi
1298	fi
1299	else
1300	(( maxcycle = maxcycle - 1 ))
1301	if (( maxcycle > 0 ))
1302	then
1303	filename=${filename}.$maxcycle
1304	fi
1305	fi
1306
1307	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1308	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1309	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1310	pathout[$i]=$filename
1311	if (( maxcycle > 0 ))
1312	then
1313	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1314	else
1315	frelout[$i]=${fname}${endout[$i]}
1316	fi
1317
1318	fi
1319	done
1320
1321
1322	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1323	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1324	then
1325	if [[ "$dvrp_inc" = "" ]]
1326	then
1327	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1328	printf "\n This is required for the dvrp_graphics package.\n"
1329	locat=dvrp; exit
1330	fi
1331	if [[ "$dvrp_lib" = "" ]]
1332	then
1333	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1334	printf "\n This is required for the dvrp_graphics package.\n"
1335	locat=dvrp; exit
1336	fi
1337	fi
1338
1339
1340	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1341	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1342	# UEBERSETZT ZU WERDEN)
1343	if [[ "$mainprog" = "" && "$executable" = "" ]]
1344	then
1345	printf "\n +++ neither main program nor executable defined"
1346	locat=source; exit
1347	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1348	then
1349	printf "\n +++ main program as well as executable defined"
1350	locat=source; exit
1351	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1352	then
1353	do_compile=false
1354	fi
1355
1356
1357	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1358	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1359	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1360	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1361	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1362	then
1363
1364	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1365	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1366
1367	if [[ $restart_run != true ]]
1368	then
1369	rm -rf SOURCES_FOR_RUN_$fname
1370	mkdir SOURCES_FOR_RUN_$fname
1371	fi
1372
1373
1374	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1375	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1376	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1377	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1378	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1379	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1380	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1381	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1382	# GESAMMELT
1383	if [[ "$source_list" = WRITE_PERMIT ]]
1384	then
1385
1386	source_list=""
1387	cd $source_path
1388
1389
1390	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1391	Names=$(ls -1 *.f90 2>&1)
1392	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1393	Names=$(ls -1 *.F90 2>&1)
1394	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1395	Names=$(ls -1 *.F 2>&1)
1396	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1397	Names=$(ls -1 *.f 2>&1)
1398	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1399	Names=$(ls -1 *.c 2>&1)
1400	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1401
1402
1403	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1404	for dateiname in $Filenames
1405	do
1406	if [[ -w $dateiname ]]
1407	then
1408	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1409	then
1410	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1411	source_list=$source_list"$dateiname "
1412	fi
1413	fi
1414	done
1415
1416	cd - > /dev/null
1417
1418
1419	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1420	then
1421
1422	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1423	source_list=""
1424	cd $source_path
1425
1426
1427	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1428	if [[ ! -d .svn ]]
1429	then
1430	printf "\n\n +++ source directory"
1431	printf "\n \"$source_path\" "
1432	printf "\n is not under control of \"subversion\"."
1433	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1434	fi
1435
1436
1437	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1438	Filenames=""
1439	svn status > tmp_mrun
1440	while read line
1441	do
1442	firstc=`echo $line \| cut -c1`
1443	if [[ $firstc = M \|\| $firstc = "?" ]]
1444	then
1445	Name=`echo "$line" \| cut -c8-`
1446	extension=`echo $Name \| cut -d. -f2`
1447	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1448	then
1449	Filenames="$Filenames "$Name
1450	fi
1451	fi
1452	done < tmp_mrun
1453
1454
1455	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1456	for dateiname in $Filenames
1457	do
1458	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1459	source_list=$source_list"$dateiname "
1460	done
1461
1462	cd - > /dev/null
1463
1464
1465	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1466	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1467	# VORHANDEN
1468	elif [[ "$source_list" != "" && $restart_run != true ]]
1469	then
1470
1471	cd $source_path
1472
1473	for filename in $source_list
1474	do
1475
1476	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1477	if [[ $(print $filename \| grep -c "/") != 0 ]]
1478	then
1479	printf "\n +++ source code file: $filename"
1480	printf "\n must not contain (\"/\") "
1481	locat=source; exit
1482	fi
1483
1484	if [[ ! -f $filename ]]
1485	then
1486	printf "\n +++ source code file: $filename"
1487	printf "\n does not exist"
1488	locat=source; exit
1489	else
1490	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1491	fi
1492
1493	done
1494
1495	cd - > /dev/null
1496
1497	fi
1498
1499
1500	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1501	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1502	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1503	if [[ $restart_run != true ]]
1504	then
1505
1506	if [[ ! -f "$source_path/$mainprog" ]]
1507	then
1508	printf "\n\n +++ main program: $mainprog"
1509	printf "\n does not exist in source directory"
1510	printf "\n \"$source_path\"\n"
1511	locat=source; exit
1512	else
1513	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1514	then
1515	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1516	source_list=${mainprog}" $source_list"
1517	fi
1518	fi
1519	fi
1520
1521
1522	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1523	if [[ $restart_run != true && "$add_source_path" != "" ]]
1524	then
1525
1526	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1527	if [[ ! -d $add_source_path ]]
1528	then
1529	printf "\n\n +++ WARNING: additional source code directory"
1530	printf "\n \"$add_source_path\" "
1531	printf "\n does not exist or is not a directory."
1532	printf "\n No source code will be used from this directory!\n"
1533	add_source_path=""
1534	sleep 3
1535	else
1536
1537	cd $add_source_path
1538
1539	Names=$(ls -1 *.f90 2>&1)
1540	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1541	Names=$(ls -1 *.F90 2>&1)
1542	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1543	Names=$(ls -1 *.F 2>&1)
1544	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1545	Names=$(ls -1 *.f 2>&1)
1546	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1547	Names=$(ls -1 *.c 2>&1)
1548	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1549
1550	cd - > /dev/null
1551	cd SOURCES_FOR_RUN_$fname
1552
1553	for dateiname in $AddFilenames
1554	do
1555	if [[ -f $dateiname ]]
1556	then
1557	printf "\n +++ source code file \"$dateiname\" found in additional"
1558	printf "\n source code directory \"$add_source_path\" "
1559	printf "\n as well as in directory \"$source_path\"."
1560	locat=source; exit
1561	fi
1562
1563	cp $add_source_path/$dateiname .
1564	source_list="$source_list $dateiname"
1565
1566	# Default User-Interface von der Liste entfernen, falls Datei
1567	# ein User-Interface enthaelt
1568	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1569	then
1570	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1571	then
1572	rm -rf user_interface.f90
1573	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1574	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1575	printf "\n since a user-interface is found in file"
1576	printf "\n \"$add_source_path/$dateiname\" \n"
1577	sleep 3
1578	else
1579	printf "\n\n *** user-interface file \"$dateiname\" "
1580	printf "\n added to the files to be translated \n"
1581	sleep 3
1582	fi
1583	fi
1584	done
1585
1586	cd - > /dev/null
1587	fi
1588	fi
1589
1590
1591	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1592	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1593	if [[ $restart_run != true && -n $package_list ]]
1594	then
1595
1596	cd $source_path
1597
1598	for package in $package_list
1599	do
1600
1601	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1602
1603	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1604	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1605	# LIEFERT
1606	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1607
1608
1609	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1610	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1611	for source_list_name in $package_source_list
1612	do
1613	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1614	then
1615
1616	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1617	ending=`echo $source_list_name \| cut -f2 -d.`
1618	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1619	then
1620	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1621	source_list="$source_list $source_list_name"
1622	fi
1623	fi
1624	done
1625	done
1626
1627	cd - > /dev/null
1628	fi
1629
1630
1631	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1632	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1633	if [[ "$restart_run" != true ]]
1634	then
1635	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1636	if [[ ! -f $makefile ]]
1637	then
1638	printf "\n +++ file \"$makefile\" does not exist"
1639	locat=make; exit
1640	else
1641	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1642	fi
1643	fi
1644
1645	fi # do_compile=true
1646
1647
1648	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1649	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1650	if [[ $do_compile = true ]]
1651	then
1652
1653	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1654	# ZUSAMMENSETZEN
1655	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1656	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1657	then
1658	cpp_options="${cpp_options},-D__ibm=__ibm"
1659	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1660	then
1661	cpp_options="$cpp_options -D__nec"
1662	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1663	then
1664	cpp_options="$cpp_options -D__lc"
1665	else
1666	cpp_options="$cpp_options -D__$localhost"
1667	fi
1668
1669	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1670	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1671	then
1672	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1673	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1674	else
1675	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1676	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1677	fi
1678
1679	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1680	if [[ -n $package_list ]]
1681	then
1682	for package in $package_list
1683	do
1684	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1685	then
1686	if [[ $package != "dvrp_graphics+1PE" ]]
1687	then
1688	cpp_options="${cpp_options},-D__$package=__$package"
1689	else
1690	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1691	export use_seperate_pe_for_dvrp_output=true
1692	fi
1693	else
1694	if [[ $package != "dvrp_graphics+1PE" ]]
1695	then
1696	cpp_options="$cpp_options -D__$package"
1697	else
1698	cpp_options="$cpp_options -D__dvrp_graphics"
1699	export use_seperate_pe_for_dvrp_output=true
1700	fi
1701	fi
1702	done
1703	fi
1704
1705	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1706	if [[ -n $cpp_opts ]]
1707	then
1708	for popts in $cpp_opts
1709	do
1710	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1711	then
1712	cpp_options="${cpp_options},-D__$popts=__$popts"
1713	else
1714	cpp_options="$cpp_options -D__$popts"
1715	fi
1716	done
1717	fi
1718
1719	else
1720
1721
1722	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1723	if [[ $do_remote = false ]]
1724	then
1725	if [[ ! -f $executable ]]
1726	then
1727	printf "\n +++ executable file: $executable"
1728	printf "\n does not exist"
1729	locat=executable; exit
1730	fi
1731	fi
1732	fi
1733
1734
1735	# JOBMODUS FESTSTELLEN
1736	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1737	then
1738	jobmo=BATCH
1739	else
1740	jobmo=INTERACTIVE
1741	fi
1742
1743
1744	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1745	# DURCH BENUTZER ANDERWEITIG VEREINBART
1746	if [[ "$compiler_name" = "" ]]
1747	then
1748
1749	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1750	locat=compiler_name; exit
1751
1752	fi
1753
1754
1755	# COMPILER AUF NECK UEBERSCHREIBEN
1756	[[ $localhost = neck ]] && compiler_name=mpif90
1757
1758
1759
1760	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1761	kennung=$RANDOM
1762	if [[ "$tmp_user_catalog" = "" ]]
1763	then
1764	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1765	then
1766	tmp_user_catalog=$TMPDIR
1767	elif [[ $localhost = nech ]]
1768	then
1769	tmp_user_catalog=$WRKSHR
1770	else
1771	tmp_user_catalog=/tmp
1772	fi
1773	fi
1774	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1775
1776
1777	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1778	# BESTIMMEN
1779	if [[ "$tmp_data_catalog" = "" ]]
1780	then
1781	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1782	then
1783	tmp_data_catalog=$WORK/mrun_restart_data
1784	elif [[ $localhost = nech ]]
1785	then
1786	tmp_data_catalog=$WRKSHR/mrun_restart_data
1787	else
1788	tmp_data_catalog=/tmp/mrun_restart_data
1789	fi
1790	fi
1791
1792
1793	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1794	# ERSETZEN
1795	if [[ $do_remote = false && $do_compile = true ]]
1796	then
1797	eval fopts=\"$fopts\"
1798	eval lopts=\"$lopts\"
1799	fi
1800
1801
1802
1803	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1804	fopts="$fopts $netcdf_inc $dvrp_inc"
1805	lopts="$lopts $netcdf_lib $dvrp_lib"
1806	ROPTS="$ropts"
1807	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit \|\| $host = lcfimm ) && -n $numprocs ]]
1808	then
1809	XOPT="-X $numprocs"
1810	fi
1811
1812
1813
1814	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1815	# GRAMM BENOETIGT
1816	done=false
1817	while [[ $done = false ]]
1818	do
1819	cputime=$cpumax
1820	if (( $cputime == 0 ))
1821	then
1822	printf "\n +++ cpu-time is undefined"
1823	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1824	printf "\n >>> "
1825	read cputime 1>/dev/null 2>&1
1826	else
1827	done=true
1828	fi
1829	cpumax=$cputime
1830	done
1831
1832	(( minuten = cputime / 60 ))
1833	(( sekunden = cputime - minuten * 60 ))
1834
1835
1836	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1837	if [[ $do_batch = true ]]
1838	then
1839	done=false
1840	while [[ $done = false ]]
1841	do
1842	if (( memory == 0 ))
1843	then
1844	printf "\n +++ memory demand is undefined"
1845	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1846	printf "\n >>> "
1847	read memory 1>/dev/null 2>&1
1848	else
1849	done=true
1850	fi
1851	done
1852	fi
1853
1854
1855	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1856	if [[ $do_remote = true && -z $remote_username ]]
1857	then
1858	while [[ -z $remote_username ]]
1859	do
1860	printf "\n +++ username on remote host \"$host\" is undefined"
1861	printf "\n >>> Please type username:"
1862	printf "\n >>> "
1863	read remote_username
1864	done
1865	mc="$mc -u$remote_username"
1866	fi
1867
1868	###########################################################################
1869	# HEADER-AUSGABE
1870	###########################################################################
1871
1872
1873	calltime=$(date)
1874	printf "\n"
1875	# [[ $silent = false ]] && clear
1876	printf "#--------------------------------------------------------------# \n"
1877	printf "\| $version$calltime \| \n"
1878	printf "\| \| \n"
1879	spalte1="called on:"; spalte2=$localhost_realname
1880	printf "\| $spalte1$spalte2 \| \n"
1881	if [[ $local_compile = false ]]
1882	then
1883	if [[ $do_remote = true ]]
1884	then
1885	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1886	else
1887	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1888	fi
1889	else
1890	spalte1="compiling test only!"; spalte2=""
1891	fi
1892	printf "\| $spalte1$spalte2 \| \n"
1893	if [[ -n $numprocs ]]
1894	then
1895	spalte1="number of PEs:"; spalte2=$numprocs
1896	printf "\| $spalte1$spalte2 \| \n"
1897	fi
1898	if [[ -n $tasks_per_node ]]
1899	then
1900	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1901	printf "\| $spalte1$spalte2 \| \n"
1902	fi
1903	if [[ $threads_per_task != 1 ]]
1904	then
1905	spalte1="threads per task:"; spalte2="$threads_per_task"
1906	printf "\| $spalte1$spalte2 \| \n"
1907	fi
1908	printf "\| \| \n"
1909	if [[ $do_compile = true ]]
1910	then
1911	spalte1=cpp-directives:; spalte2=$cpp_options
1912	printf "\| $spalte1$spalte2 \| \n"
1913	zeile=$(echo "$cpp_options" \| cut -c41-)
1914	while [[ "$zeile" != "" ]]
1915	do
1916	spalte1=""
1917	spalte2=$zeile
1918	printf "\| $spalte1$spalte2 \| \n"
1919	zeile=$(echo "$zeile" \| cut -c41-)
1920	done
1921
1922	spalte1=compiler-options:; spalte2="$fopts"
1923	printf "\| $spalte1$spalte2 \| \n"
1924	zeile=$(echo "$fopts" \| cut -c41-)
1925	while [[ "$zeile" != "" ]]
1926	do
1927	spalte1=""
1928	spalte2=$zeile
1929	printf "\| $spalte1$spalte2 \| \n"
1930	zeile=$(echo "$zeile" \| cut -c41-)
1931	done
1932
1933	spalte1=linker-options:; spalte2=$lopts
1934	printf "\| $spalte1$spalte2 \| \n"
1935	zeile=$(echo "$lopts" \| cut -c41-)
1936	while [[ "$zeile" != "" ]]
1937	do
1938	spalte1=""
1939	spalte2=$zeile
1940	printf "\| $spalte1$spalte2 \| \n"
1941	zeile=$(echo "$zeile" \| cut -c41-)
1942	done
1943
1944	spalte1="main program":; spalte2=$mainprog
1945	printf "\| $spalte1$spalte2 \| \n"
1946	else
1947	spalte1=executable:; spalte2=$executable
1948	printf "\| $spalte1$spalte2 \| \n"
1949	fi
1950	printf "\| \| \n"
1951	spalte1="base name of files":; spalte2=$fname
1952	printf "\| $spalte1$spalte2 \| \n"
1953	if [[ $fname != $afname ]]
1954	then
1955	spalte1="base name of input files":; spalte2=$afname
1956	printf "\| $spalte1$spalte2 \| \n"
1957	fi
1958	spalte1="INPUT control list":; spalte2=$input_list
1959	printf "\| $spalte1$spalte2 \| \n"
1960	spalte1="OUTPUT control list":; spalte2=$output_list
1961	printf "\| $spalte1$spalte2 \| \n"
1962
1963	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
1964	then
1965	spalte1="memory demand / PE":; spalte2="$memory MB"
1966	printf "\| $spalte1$spalte2 \| \n"
1967	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
1968	printf "\| $spalte1$spalte2 \| \n"
1969	fi
1970
1971	if [[ $do_compile = true ]]
1972	then
1973	printf "\| \| \n"
1974	printf "\| Files to be compiled: \| \n"
1975	zeile=$source_list
1976	while [[ "$zeile" != "" ]]
1977	do
1978	spalte3=$zeile
1979	printf "\| $spalte3 \| \n"
1980	zeile=$(echo "$zeile" \| cut -c61-)
1981	done
1982	fi
1983	printf "#--------------------------------------------------------------#"
1984
1985
1986
1987	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
1988	if [[ $do_trace = true ]]
1989	then
1990	(( i = 0 ))
1991	while (( i < iin ))
1992	do
1993	(( i = i + 1 ))
1994	if (( i == 1 ))
1995	then
1996	printf "\n\n >>> INPUT-file assignments:\n"
1997	fi
1998	printf "\n ${localin[$i]} : ${absnamein[$i]}"
1999	done
2000	(( i = 0 ))
2001	while (( i < iout ))
2002	do
2003	(( i = i + 1 ))
2004	if (( i == 1 ))
2005	then
2006	printf "\n\n >>> OUTPUT-file assignments:\n"
2007	fi
2008	printf "\n ${localout[$i]} : ${pathout[$i]}"
2009	done
2010	(( i = 0 ))
2011	while (( i < iic ))
2012	do
2013	(( i = i + 1 ))
2014	if (( i == 1 ))
2015	then
2016	printf "\n\n >>> INPUT-commands:\n"
2017	fi
2018	printf "\n ${in_command[$i]}"
2019	done
2020	(( i = 0 ))
2021	while (( i < ioc ))
2022	do
2023	(( i = i + 1 ))
2024	if (( i == 1 ))
2025	then
2026	printf "\n\n >>> OUTPUT-commands:\n"
2027	fi
2028	printf "\n ${out_command[$i]}"
2029	done
2030	fi
2031
2032
2033	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2034	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2035	then
2036	antwort=dummy
2037	printf "\n\n"
2038	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2039	do
2040	printf " >>> everything o.k. (y/n) ? "
2041	read antwort
2042	done
2043	if [[ $antwort = n \|\| $antwort = N ]]
2044	then
2045	locat=user_abort; (( iec = 0 )); exit
2046	fi
2047	if [[ $do_batch = true ]]
2048	then
2049	printf " >>> batch-job will be created and submitted"
2050	else
2051	if [[ $local_compile = false ]]
2052	then
2053	printf " >>> MRUN will now continue to execute on this machine"
2054	else
2055	printf " >>> a test compilation will now be carried out on this machine"
2056	fi
2057	fi
2058	fi
2059
2060
2061
2062
2063	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2064	# CHENDE AKTIONEN DURCHGEFUEHRT
2065	if [[ $do_batch = false ]]
2066	then
2067
2068
2069	# TEMPORAEREN KATALOG ERZEUGEN
2070	mkdir -p $TEMPDIR
2071	chmod go+rx $TEMPDIR
2072	tmpcreate=true
2073
2074
2075	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2076	# TEMPORAERES VERZEICHNIS KOPIEREN
2077	if [[ $do_compile = true ]]
2078	then
2079
2080	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2081	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2082	if [[ $localhost = nech ]]
2083	then
2084	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2085	if mkdir -p $TEMPDIR_COMPILE
2086	then
2087	printf "\n *** \"$TEMPDIR_COMPILE\" "
2088	printf "\n is generated as temporary directory for cross compiling\n"
2089	else
2090	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2091	printf "\n needed for cross compilation failed"
2092	locat=compile
2093	exit
2094	fi
2095	else
2096	TEMPDIR_COMPILE=$TEMPDIR
2097	fi
2098
2099
2100	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2101	line=""
2102	grep "%depository_path" $config_file > tmp_mrun
2103	while read line
2104	do
2105	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2106	then
2107	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2108	then
2109	global_depository_path=`echo $line \| cut -d" " -s -f2`
2110	fi
2111	fi
2112	done < tmp_mrun
2113
2114	line=""
2115	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2116	while read line
2117	do
2118	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2119	then
2120	local_depository_path=`echo $line \| cut -d" " -s -f2`
2121	fi
2122	done < tmp_mrun
2123
2124	if [[ "$local_depository_path" = "" ]]
2125	then
2126	if [[ "$global_depository_path" != "" ]]
2127	then
2128	local_depository_path=$global_depository_path
2129	else
2130	printf "\n\n +++ no depository path found in configuration file"
2131	printf "\n for local host \"$localhost\" "
2132	printf "\n please set \"\%depository_path\" in configuration file\n"
2133	locat=config_file; exit
2134	fi
2135	fi
2136	eval local_depository_path=$local_depository_path
2137
2138	basename=`print $mainprog \| cut -f1 -d"."`
2139	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2140	if [[ ! -f $make_depository ]]
2141	then
2142	printf "\n"
2143	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2144	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2145	else
2146	cp $make_depository $TEMPDIR_COMPILE
2147	cd $TEMPDIR_COMPILE
2148	tar -xf $make_depository > /dev/null 2>&1
2149	cd - > /dev/null
2150	fi
2151
2152	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2153
2154	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2155	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2156	# MAKEFILE EINTRAGEN
2157	cd $TEMPDIR_COMPILE
2158	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2159	if [[ "$interface_file" != "" ]]
2160	then
2161	interface_file=`echo $interface_file \| cut -d"." -f1`
2162	mv Makefile Makefile_old
2163	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2164	fi
2165	cd - > /dev/null
2166	else
2167	cp $executable ${TEMPDIR}/a.out
2168	fi
2169
2170
2171	# WECHSEL IN TEMPORAEREN KATALOG
2172	cd $TEMPDIR
2173	printf "\n *** changed to temporary directory: $TEMPDIR"
2174
2175
2176	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2177	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2178	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2179	# ERMITTELN
2180	(( i = 0 ))
2181	while (( i < iout ))
2182	do
2183	(( i = i + 1 ))
2184	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2185	then
2186	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2187	else
2188	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2189	fi
2190	done
2191
2192
2193	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2194	if [[ $do_compile = true ]]
2195	then
2196
2197
2198	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2199	printf "\n\n\n *** compilation starts \n$striche\n"
2200	printf " *** compilation with make using following options:\n"
2201	printf " compilername: $compiler_name\n"
2202	printf " options: $fopts\n"
2203	printf " preprocessor-directives: $cpp_options \n"
2204	printf " linker-options: $lopts \n"
2205	printf " source code files: $source_list \n"
2206
2207	if [[ $localhost = nech ]]
2208	then
2209	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2210	cp $TEMPDIR_COMPILE/a.out .
2211	[[ $? != 0 ]] && compile_error=true
2212	rm -rf $TEMPDIR_COMPILE
2213	else
2214	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2215	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2216	fi
2217
2218	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2219	then
2220	printf "\n +++ error occured while compiling or linking"
2221	locat=compile
2222	exit
2223	else
2224	printf "$striche\n *** compilation finished \n"
2225	fi
2226	fi
2227
2228
2229	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2230	if [[ $local_compile = true ]]
2231	then
2232	cd $HOME
2233	rm -rf $TEMPDIR
2234	locat=local_compile; exit
2235	fi
2236
2237
2238	# BEREITSTELLEN DER INPUT-DATEIEN
2239	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2240	(( i = 0 ))
2241	while (( i < iin ))
2242	do
2243	(( i = i + 1 ))
2244	if (( i == 1 ))
2245	then
2246	printf "\n\n *** providing INPUT-files:\n$striche"
2247	fi
2248
2249
2250	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2251	if [[ "${transin[$i]}" = unavailable ]]
2252	then
2253	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2254	then
2255	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2256	printf "\n is not available!"
2257	else
2258	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2259	printf "\n is not available!"
2260	fi
2261	continue
2262	fi
2263
2264	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2265	files_for_pes=false; datentyp=file
2266	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2267	then
2268	files_for_pes=true; datentyp=directory
2269	actionin[$i]=""
2270	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2271	then
2272	actionin[$i]=""
2273	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2274	then
2275	files_for_pes=true; datentyp=directory
2276	actionin[$i]="ar"
2277	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2278	then
2279	actionin[$i]="ar"
2280	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2281	then
2282	files_for_pes=true; datentyp=directory
2283	actionin[$i]="fl"
2284	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2285	then
2286	actionin[$i]="fl"
2287	fi
2288
2289	if [[ $files_for_pes = true ]]
2290	then
2291	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2292	else
2293	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2294	fi
2295
2296	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2297	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2298	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2299	# SERVER ZU HOLEN
2300	if [[ "${actionin[$i]}" = fl ]]
2301	then
2302	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2303	if [[ $files_for_pes = false ]]
2304	then
2305	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2306	then
2307	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2308	got_tmp[$i]=true
2309	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2310	then
2311	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2312	printf "\n *** trying to use backup copy in \"$WORK\" "
2313	cp $WORK/${frelin[$i]} ${localin[$i]}
2314	else
2315	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2316	printf "\n or \"$tmp_data_catalog\" does not exist!"
2317	printf "\n *** trying to get copy from archive"
2318	actionin[$i]=ar
2319	fi
2320	else
2321	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2322	then
2323	mkdir ${localin[$i]}
2324	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2325	got_tmp[$i]=true
2326	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2327	then
2328	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2329	printf "\n *** trying to use backup copy in \"$WORK\" "
2330	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2331	else
2332	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2333	printf "\n or \"$tmp_data_catalog\" does not exist!"
2334	printf "\n *** trying to get copy from archive"
2335	actionin[$i]=ar
2336	fi
2337	fi
2338	fi
2339
2340
2341	# DATEI LIEGT AUF ARCHIV-SERVER
2342	if [[ "${actionin[$i]}" = ar ]]
2343	then
2344
2345	if [[ $files_for_pes = false ]]
2346	then
2347	printf "\n file will be restored from archive-system ($archive_system)!"
2348	else
2349	printf "\n directory will be restored from archive-system ($archive_system)!"
2350	fi
2351
2352	file_restored=false
2353
2354	if [[ $archive_system = asterix ]]
2355	then
2356	do_stagein=true
2357	(( stagein_anz = 0 ))
2358	while [[ $do_stagein = true ]]
2359	do
2360	if [[ $files_for_pes = false ]]
2361	then
2362	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2363	else
2364	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2365	fi
2366	cat STAGEIN_OUTPUT
2367	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2368	then
2369	file_restored=true
2370	do_stagein=false
2371	else
2372	(( stagein_anz = stagein_anz + 1 ))
2373	if (( stagein_anz == 10 ))
2374	then
2375	printf "\n +++ stagein stoped after 10 tries"
2376	locat=stage
2377	exit
2378	fi
2379	printf "\n +++ restoring from archive failed, trying again:"
2380	sleep 900
2381	fi
2382	done
2383	elif [[ $archive_system = DMF ]]
2384	then
2385	if [[ $files_for_pes = false ]]
2386	then
2387	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2388	locat=DMF
2389	exit
2390	else
2391	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2392	cp -r $ARCHIVE/${frelin[$i]} $PWD
2393	file_restored=true
2394	fi
2395	elif [[ $archive_system = tivoli ]]
2396	then
2397	if [[ $files_for_pes = false ]]
2398	then
2399	if [[ $localhost = ibmh ]]
2400	then
2401	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2402	else
2403	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2404	fi
2405	else
2406	(( inode = 0 ))
2407	while (( inode < nodes ))
2408	do
2409	if [[ $localhost = ibmh ]]
2410	then
2411	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2412	else
2413	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2414	fi
2415	(( inode = inode + 1 ))
2416	done
2417	fi
2418	file_restored=true
2419	elif [[ $archive_system = ut ]]
2420	then
2421	if [[ $files_for_pes = false ]]
2422	then
2423	cp $UT/${frelin[$i]} .
2424	else
2425	(( inode = 0 ))
2426	while (( inode < nodes ))
2427	do
2428	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2429	(( inode = inode + 1 ))
2430	done
2431	fi
2432	file_restored=true
2433	else
2434	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2435	locat=rearchive
2436	exit
2437	fi
2438
2439	if [[ $file_restored = true ]]
2440	then
2441
2442	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2443	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2444	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2445	if [[ $files_for_pes = false ]]
2446	then
2447	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2448	else
2449	mkdir $tmp_data_catalog/${frelin[$i]}
2450	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2451	fi
2452	got_tmp[$i]=true
2453
2454	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2455	mv ${frelin[$i]} ${localin[$i]}
2456
2457	fi
2458	fi
2459
2460
2461	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2462	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2463	then
2464
2465	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2466	then
2467
2468	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2469	printf "\n file will be provided for $numprocs processors"
2470	mkdir ${localin[$i]}
2471	ival=$numprocs
2472	(( ii = 0 ))
2473	while (( ii <= ival-1 ))
2474	do
2475	if (( ii < 10 ))
2476	then
2477	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2478	elif (( ii < 100 ))
2479	then
2480	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2481	elif (( ii < 1000 ))
2482	then
2483	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2484	else
2485	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2486	fi
2487	(( ii = ii + 1 ))
2488	done
2489
2490	else
2491
2492	if [[ $files_for_pes = true ]]
2493	then
2494
2495	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2496	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2497	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2498	# PER MOVE UMBENANNT WERDEN
2499	printf "\n providing $numprocs files for the respective processors"
2500	mkdir ${localin[$i]}
2501	cp -r ${absnamein[$i]}/* ${localin[$i]}
2502
2503	else
2504	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2505	cp ${absnamein[$i]} ${localin[$i]}
2506	fi
2507	fi
2508	fi
2509
2510	done
2511	if (( i != 0 ))
2512	then
2513	printf "\n$striche\n *** all INPUT-files provided \n"
2514	fi
2515
2516
2517	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2518	# LESEN VON PALM)
2519	cat > ENVPAR << %%END%%
2520	&envpar run_identifier = '$fname', host = '$localhost',
2521	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2522	maximum_cpu_time_allowed = ${cpumax}.,
2523	revision = '$global_revision' /
2524
2525	%%END%%
2526
2527
2528	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2529	(( i = 0 ))
2530	while (( i < iic ))
2531	do
2532	(( i = i + 1 ))
2533	if (( i == 1 ))
2534	then
2535	printf "\n\n *** execution of INPUT-commands:\n$striche"
2536	fi
2537	printf "\n >>> ${in_command[$i]}"
2538	eval ${in_command[$i]}
2539	if (( i == iic ))
2540	then
2541	printf "\n$striche\n"
2542	fi
2543	done
2544
2545
2546	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2547	cpurest=${cpumax}.
2548
2549
2550	# PROGRAMMSTART
2551	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2552	PATH=$PATH:$TEMPDIR
2553
2554	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2555	then
2556	if [[ "$ENVIRONMENT" = BATCH ]]
2557	then
2558	printf "\n +++ debug is allowed in interactive mode only"
2559	locat=debug
2560	exit
2561	fi
2562	if [[ $localhost = decalpha ]]
2563	then
2564	dxladebug a.out
2565	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2566	then
2567
2568	# SETUP THE IBM MPI ENVIRONMENT
2569	export MP_SHARED_MEMORY=yes
2570	export AIXTHREADS_SCOPE=S
2571	export OMP_NUM_THREADS=$threads_per_task
2572	export AUTHSTATE=files
2573	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2574
2575	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2576	export MP_ADAPTER_USE=shared
2577	export MP_CPU_USE=multiple
2578	export MP_TIMEOUT=1200
2579
2580	unset MP_TASK_AFFINITY
2581
2582	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2583	#(( ii = 1 ))
2584	#while (( ii <= $numprocs ))
2585	#do
2586	# echo $localhost_realname >> hostfile
2587	# (( ii = ii + 1 ))
2588	#done
2589	#export MP_HOSTFILE=hostfile
2590
2591	if [[ "$LOADLBATCH" = yes ]]
2592	then
2593	totalview poe a.out $ROPTS
2594	else
2595	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2596	export TVDSVRLAUNCHCMD=ssh
2597	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2598	fi
2599	else
2600	printf "\n +++ no debug available on \"$localhost\" "
2601	printf "\n or not implemented in mrun so far"
2602	locat=debug
2603	exit
2604	fi
2605	else
2606	if [[ -n $numprocs ]]
2607	then
2608
2609	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2610	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2611	then
2612	# SETUP THE IBM MPI ENVIRONMENT
2613	export MP_SHARED_MEMORY=yes
2614	export AIXTHREAD_SCOPE=S
2615	export OMP_NUM_THREADS=$threads_per_task
2616	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2617	export AUTHSTATE=files
2618	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2619	# export MP_PRINTENV=yes
2620
2621	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2622	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2623	export MP_WAIT_MODE=poll
2624	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2625	# export MP_EAGER_LIMIT=65535
2626
2627	# # TESTWEISE FUER TURBOMPI (JAN 05)
2628	# export MPJ_MTAB=128
2629	# export MPJ_ALLTOALL=1
2630	# export MPJ_ALLTOALLV=1
2631
2632	if [[ "$LOADLBATCH" = yes ]]
2633	then
2634	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2635	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2636	then
2637	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2638	else
2639	poe ./a.out $ROPTS
2640	fi
2641	else
2642	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2643	then
2644	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2645	elif [[ $localhost = ibmy ]]
2646	then
2647	if [[ -f $hostfile ]]
2648	then
2649	cp $hostfile hostfile
2650	else
2651	(( ii = 1 ))
2652	while (( ii <= $numprocs ))
2653	do
2654	echo $localhost_realname >> hostfile
2655	(( ii = ii + 1 ))
2656	done
2657	fi
2658	export MP_HOSTFILE=hostfile
2659	./a.out -procs $tasks_per_node $ROPTS
2660	else
2661	if [[ "$host_file" = "" ]]
2662	then
2663	printf "\n +++ no hostfile given in configuration file"
2664	locat=config_file
2665	exit
2666	else
2667	eval host_file=$host_file
2668	fi
2669	export MP_HOSTFILE=$host_file
2670	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2671	fi
2672	fi
2673	elif [[ $host = nech \|\| $host = neck ]]
2674	then
2675	(( ii = nodes ))
2676	if [[ $ii = 1 ]]
2677	then
2678	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2679	export MPIPROGINF=YES
2680	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2681	echo "*** execution on single node with mpirun"
2682	mpirun -np $numprocs ./a.out $ROPTS
2683	else
2684	(( i = 0 ))
2685	while (( i < ii ))
2686	do
2687	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2688	(( i = i + 1 ))
2689	done
2690
2691	echo "#!/bin/sh" > mpi_exec_shell
2692	echo " " >> mpi_exec_shell
2693	echo "set -u" >> mpi_exec_shell
2694	echo "F_ERRCNT=0" >> mpi_exec_shell
2695	echo "MPIPROGINV=YES" >> mpi_exec_shell
2696	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2697	echo "cpurest=$cpurest" >> mpi_exec_shell
2698	echo "fname=$fname" >> mpi_exec_shell
2699	echo "localhost=$localhost" >> mpi_exec_shell
2700	echo "return_addres=$return_addres" >> mpi_exec_shell
2701	echo "return_username=$return_username" >> mpi_exec_shell
2702	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2703	echo "write_binary=$write_binary" >> mpi_exec_shell
2704	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2705	echo " " >> mpi_exec_shell
2706	echo "export F_ERRCNT" >> mpi_exec_shell
2707	echo "export MPIPROGINV" >> mpi_exec_shell
2708	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2709	echo "export cpurest" >> mpi_exec_shell
2710	echo "export fname" >> mpi_exec_shell
2711	echo "export localhost" >> mpi_exec_shell
2712	echo "export return_addres" >> mpi_exec_shell
2713	echo "export return_username" >> mpi_exec_shell
2714	echo "export tasks_per_node" >> mpi_exec_shell
2715	echo "export write_binary" >> mpi_exec_shell
2716	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2717	echo " " >> mpi_exec_shell
2718	echo "exec ./a.out" >> mpi_exec_shell
2719
2720	chmod u+x mpi_exec_shell
2721	export MPIPROGINF=YES
2722	mpirun -f multinode_config &
2723	wait
2724
2725	fi
2726	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2727	then
2728
2729	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2730	# DOES NOT EXIST
2731	if [[ -f $hostfile ]]
2732	then
2733	cp $hostfile hostfile
2734	else
2735	(( ii = 1 ))
2736	while (( ii <= $numprocs / $threads_per_task ))
2737	do
2738	echo $localhost_realname >> hostfile
2739	(( ii = ii + 1 ))
2740	done
2741	fi
2742	(( ii = $numprocs / $threads_per_task ))
2743	eval zeile=\"`head -n $ii hostfile`\"
2744	printf "\n *** running on: $zeile"
2745	export OMP_NUM_THREADS=$threads_per_task
2746	if [[ $threads_per_task != 1 ]]
2747	then
2748	printf "\n threads per task: $threads_per_task"
2749	fi
2750	if [[ $run_coupled_model = false ]]
2751	then
2752	printf "\n\n"
2753	mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2754	else
2755	(( iii = ii / 2 ))
2756	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2757	printf "\n\n"
2758	mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2759	mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2760	wait
2761	fi
2762
2763	# if [[ $scirocco = true ]]
2764	# then
2765	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2766	# else
2767	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2768	# fi
2769
2770	elif [[ $host = decalpha ]]
2771	then
2772	dmpirun -np $numprocs a.out $ROPTS
2773	elif [[ $host = lctit ]]
2774	then
2775	export runfile=runfile.$kennung
2776
2777	echo "cd $PWD" > $runfile
2778	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2779	echo "export cpurest=$cpurest" >> $runfile
2780	echo "export fname=$fname" >> $runfile
2781	echo "export localhost=$localhost" >> $runfile
2782	echo "export return_addres=$return_addres" >> $runfile
2783	echo "export return_username=$return_username" >> $runfile
2784	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2785	echo "export write_binary=$write_binary" >> $runfile
2786	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2787	echo "./a.out" >> $runfile
2788	chmod u+x $runfile
2789
2790	if [[ "$QUEUE" = interactive ]]
2791	then
2792	mpirun -np $numprocs a.out $ROPTS
2793	else
2794	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2795	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g 4S070143 -mpi $numprocs -smp 16 -mem 1.75 -N palm -rt 21600 -q $queue a.out $ROPTS
2796	fi
2797
2798	rm $runfile
2799	else
2800	mpprun -n $numprocs a.out $ROPTS
2801	fi
2802	[[ $? != 0 ]] && execution_error=true
2803
2804
2805	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2806	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2807	then
2808	apprentice
2809	fi
2810	else
2811	a.out $ROPTS
2812	fi
2813	fi
2814	if [[ $? != 0 \|\| $execution_error = true ]]
2815	then
2816
2817	# ABBRUCH BEI LAUFZEITFEHLER
2818	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2819	printf "\n +++ runtime error occured"
2820	locat=execution
2821	exit
2822	else
2823	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2824	printf "\n$striche\n *** execution finished \n"
2825	fi
2826
2827
2828
2829	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2830	(( i = 0 ))
2831	while (( i < ioc ))
2832	do
2833	(( i = i + 1 ))
2834	if (( i == 1 ))
2835	then
2836	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2837	fi
2838	printf "\n >>> ${out_command[$i]}"
2839	eval ${out_command[$i]}
2840	if (( i == ioc ))
2841	then
2842	printf "\n$striche\n"
2843	fi
2844	done
2845
2846
2847	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2848	if [[ $do_trace = true ]]
2849	then
2850	printf "\n\n"
2851	ls -al
2852	fi
2853
2854
2855
2856	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2857	(( i = 0 ))
2858	while (( i < iout ))
2859	do
2860	(( i = i + 1 ))
2861	if (( i == 1 ))
2862	then
2863	printf "\n\n *** saving OUTPUT-files:\n$striche"
2864	fi
2865
2866	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2867	files_for_pes=false; filetyp=file
2868	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2869	then
2870	files_for_pes=true; filetyp=directory
2871	actionout[$i]=""
2872	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2873	then
2874	actionout[$i]=""
2875	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2876	then
2877	files_for_pes=true; filetyp=directory
2878	actionout[$i]="ar"
2879	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2880	then
2881	actionout[$i]="ar"
2882	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2883	then
2884	files_for_pes=true; filetyp=directory
2885	actionout[$i]="fl"
2886	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2887	then
2888	actionout[$i]="fl"
2889	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2890	then
2891	files_for_pes=true; filetyp=directory
2892	actionout[$i]="tr"
2893	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2894	then
2895	actionout[$i]="tr"
2896	fi
2897
2898	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2899	then
2900	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2901	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2902	then
2903	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
2904	else
2905
2906
2907	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2908	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2909	# REMOTE-RECHNUNGEN
2910	if [[ "${actionout[$i]}" = tr ]]
2911	then
2912	if [[ $localhost != $fromhost ]]
2913	then
2914	if [[ $files_for_pes = false ]]
2915	then
2916	cps=""
2917	cst=""
2918	else
2919	cps=-c
2920	cst="/"
2921	fi
2922	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2923	then
2924
2925	# TRANSFER IN EIGENSTAENDIGEM JOB
2926	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
2927	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
2928	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
2929	if [[ $files_for_pes = false ]]
2930	then
2931	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
2932	else
2933	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
2934	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
2935	fi
2936
2937	echo "set -x" > transfer_${localout[$i]}
2938	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
2939
2940	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
2941	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
2942	printf "\n or higher cycle\n"
2943	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
2944
2945	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
2946
2947	if [[ $localhost = nech ]]
2948	then
2949	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2950	else
2951	if [[ "$LOGNAME" = b323013 ]]
2952	then
2953	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2954	else
2955	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2956	fi
2957	fi
2958
2959	else
2960
2961	# TRANSFER INNERHALB DIESES JOBS
2962	transfer_failed=false
2963	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
2964	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
2965	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
2966	[[ $? != 0 ]] && transfer_failed=true
2967
2968	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
2969	# LOKALER MASCHINE ANLEGEN
2970	if [[ $transfer_failed = true ]]
2971	then
2972	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
2973	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
2974
2975	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
2976	# ANLEGEN.
2977	eval local_catalog=${pathout[$i]}
2978	if [[ ! -d $local_catalog ]]
2979	then
2980	printf " *** local directory does not exist. Trying to create:\n"
2981	printf " $local_catalog \n"
2982	mkdir -p $local_catalog
2983	fi
2984	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
2985	transfer_problems=true
2986	fi
2987	fi
2988	else
2989
2990	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
2991	actionout[$i]=""
2992	fi
2993	fi
2994
2995
2996	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2997	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2998	# REMOTE-RECHNUNGEN
2999	if [[ "${actionout[$i]}" = tra ]]
3000	then
3001	if [[ $localhost != $fromhost ]]
3002	then
3003	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3004	then
3005
3006	# TRANSFER IN EIGENSTAENDIGEM JOB
3007	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3008	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3009	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3010	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3011
3012	echo "set -x" > transfer_${localout[$i]}
3013	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3014
3015	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3016	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3017	printf "\n or higher cycle\n"
3018	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3019
3020	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3021
3022	if [[ $localhost = nech ]]
3023	then
3024	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3025	else
3026	if [[ $LOGNAME = b323013 ]]
3027	then
3028	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3029	else
3030	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3031	fi
3032	fi
3033
3034	else
3035
3036	# TRANSFER INNERHALB DIESES JOBS
3037	transfer_failed=false
3038	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3039	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3040	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3041	[[ $? != 0 ]] && transfer_failed=true
3042
3043	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3044	# LOKALER MASCHINE ANLEGEN
3045	if [[ $transfer_failed = true ]]
3046	then
3047	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3048	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3049
3050	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3051	# ANLEGEN
3052	eval local_catalog=${pathout[$i]}
3053	if [[ ! -d $local_catalog ]]
3054	then
3055	printf " *** local directory does not exist. Trying to create:\n"
3056	printf " $local_catalog \n"
3057	mkdir -p $local_catalog
3058	fi
3059
3060	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3061	transfer_problems=true
3062	fi
3063	fi
3064	else
3065
3066	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3067	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3068	actionout[$i]=a
3069	fi
3070	fi
3071
3072
3073	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3074	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3075	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3076	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3077	if [[ "${actionout[$i]}" = fl ]]
3078	then
3079	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3080	chmod g+rx $tmp_data_catalog
3081	if [[ $files_for_pes = false ]]
3082	then
3083	printf "\n >>> OUTPUT: ${localout[$i]} to"
3084	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3085	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3086	else
3087	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3088	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3089	mkdir $tmp_data_catalog/${frelout[$i]}
3090	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3091	fi
3092
3093
3094	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3095	if [[ $store_on_archive_system = true ]]
3096	then
3097
3098	if [[ $archive_system = asterix ]]
3099	then
3100	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3101	if [[ $files_for_pes = false ]]
3102	then
3103	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3104	else
3105	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3106	fi
3107	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3108	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3109	echo "then" >> archive_${frelout[$i]}
3110	echo " do_stageout=false" >> archive_${frelout[$i]}
3111	echo "else" >> archive_${frelout[$i]}
3112	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3113	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3114	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3115	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3116	if [[ $files_for_pes = false ]]
3117	then
3118	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3119	else
3120	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3121	fi
3122	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3123	echo "fi" >> archive_${frelout[$i]}
3124	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3125	elif [[ $archive_system = DMF ]]
3126	then
3127	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3128	if [[ $files_for_pes = false ]]
3129	then
3130	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3131	locat=DMF
3132	exit
3133	else
3134	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3135	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3136	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3137	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3138	fi
3139	elif [[ $archive_system = tivoli ]]
3140	then
3141	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3142	if [[ $files_for_pes = false ]]
3143	then
3144	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3145	echo "set -x" >> archive_${frelout[$i]}
3146	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3147	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3148	else
3149
3150	echo "set -x" >> archive_${frelout[$i]}
3151	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3152	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3153	cd $tmp_data_catalog
3154	all_files=`ls -1 ${frelout[$i]}/*`
3155	cd - > /dev/null
3156	(( inode = 0 ))
3157	(( tp1 = tasks_per_node + 1 ))
3158	while (( inode < nodes ))
3159	do
3160	# echo "*** all_files = \"$all_files\" "
3161	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3162	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3163	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3164	# echo "*** files = \"$files\" "
3165	# echo "*** all_files = \"$all_files\" "
3166	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3167	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3168	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3169	(( inode = inode + 1 ))
3170	done
3171	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3172	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3173	fi
3174	elif [[ $archive_system = ut ]]
3175	then
3176	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3177	if [[ $files_for_pes = false ]]
3178	then
3179	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3180	echo "set -x" >> archive_${frelout[$i]}
3181	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3182	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3183	else
3184
3185	echo "set -x" >> archive_${frelout[$i]}
3186	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3187	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3188	cd $tmp_data_catalog
3189	all_files=`ls -1 ${frelout[$i]}/*`
3190	cd - > /dev/null
3191	(( inode = 0 ))
3192	(( tp1 = tasks_per_node + 1 ))
3193	while (( inode < nodes ))
3194	do
3195	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3196	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3197	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3198	(( inode = inode + 1 ))
3199	done
3200	fi
3201	elif [[ $archive_system = none ]]
3202	then
3203	printf " +++ archiving on $localhost not available!\n"
3204	fi
3205
3206	if [[ $archive_system != none ]]
3207	then
3208	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3209	then
3210	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3211	subjob -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3212	elif [[ $localhost = nech ]]
3213	then
3214	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3215	fi
3216	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3217	fi
3218	else
3219	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3220	fi
3221
3222
3223	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3224	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3225	if [[ $files_for_pes = false ]]
3226	then
3227	cat /dev/null > ${pathout[$i]}
3228	else
3229	mkdir -p ${pathout[$i]}
3230	fi
3231
3232	fi
3233
3234
3235	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3236	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3237	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3238	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3239	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3240	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3241	if [[ "${actionout[$i]}" = ar ]]
3242	then
3243	if [[ $files_for_pes = false ]]
3244	then
3245	printf "\n >>> OUTPUT: ${localout[$i]} to"
3246	printf "\n ${pathout[$i]}"
3247	printf "\n File will be copied to archive-system ($archive_system) !\n"
3248	else
3249	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3250	printf "\n ${pathout[$i]}"
3251	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3252	fi
3253	mv ${localout[$i]} ${frelout[$i]}
3254
3255	file_saved=false
3256
3257	if [[ $archive_system = asterix ]]
3258	then
3259	do_stageout=true
3260	(( stageout_anz = 0 ))
3261	while [[ $do_stageout = true ]]
3262	do
3263	if [[ $files_for_pes = false ]]
3264	then
3265	stageout ${frelout[$i]} > STAGE_OUTPUT
3266	else
3267	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3268	fi
3269	cat STAGE_OUTPUT
3270	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3271	then
3272	file_saved=true
3273	do_stageout=false
3274	else
3275	if [[ $files_for_pes = false ]]
3276	then
3277	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3278	else
3279	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3280	fi
3281	(( stageout_anz = stageout_anz + 1 ))
3282	if (( stageout_anz == 10 ))
3283	then
3284	printf "\n +++ stoped after 10 unsuccessful tries!"
3285	archive_save=false
3286	do_stageout=false
3287	else
3288	printf "\n *** new try to store on archive after 15 min:"
3289	sleep 900
3290	fi
3291	fi
3292	done
3293	elif [[ $archive_system = DMF ]]
3294	then
3295	if [[ $files_for_pes = false ]]
3296	then
3297	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3298	locat=DMF
3299	exit
3300	else
3301	rm -rf $ARCHIVE/${frelout[$i]}
3302	cp -r ${frelout[$i]} $ARCHIVE
3303	fi
3304	file_saved=true
3305	elif [[ $archive_system = tivoli ]]
3306	then
3307	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3308	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3309	# GELEGT WERDEN
3310	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3311	chmod g+rx $tmp_data_catalog
3312	if [[ $files_for_pes = false ]]
3313	then
3314	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3315	else
3316	mkdir $tmp_data_catalog/${frelout[$i]}
3317	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3318	fi
3319
3320	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3321	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3322	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3323	if [[ $files_for_pes = false ]]
3324	then
3325	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3326	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3327	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3328	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3329	else
3330	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3331	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3332	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3333	fi
3334
3335	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3336	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3337	file_saved=true
3338
3339	elif [[ $archive_system = ut ]]
3340	then
3341	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3342	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3343	# GELEGT WERDEN
3344	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3345	chmod g+rx $tmp_data_catalog
3346	if [[ $files_for_pes = false ]]
3347	then
3348	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3349	else
3350	mkdir $tmp_data_catalog/${frelout[$i]}
3351	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3352	fi
3353
3354	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3355	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3356	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3357	if [[ $files_for_pes = false ]]
3358	then
3359	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3360	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3361	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3362	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3363	else
3364	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3365	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3366	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3367	fi
3368
3369	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3370	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3371	file_saved=true
3372
3373	else
3374	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3375	archive_save=false
3376	fi
3377	if [[ $file_saved = true ]]
3378	then
3379	if [[ $files_for_pes = false ]]
3380	then
3381	cat /dev/null > ${pathout[$i]}
3382	else
3383	mkdir -p ${pathout[$i]}
3384	fi
3385	fi
3386	fi
3387
3388	# APPEND AUF LOKALER MASCHINE
3389	if [[ "${actionout[$i]}" = "a" ]]
3390	then
3391	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3392	cat ${localout[$i]} >> ${pathout[$i]}
3393	fi
3394
3395	# KOPIEREN AUF LOKALER MASCHINE
3396	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3397	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3398	then
3399
3400	# KOPIEREN AUF EINPROZESSORMASCHINE
3401	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3402	then
3403	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3404	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3405	else
3406	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3407	cp ${localout[$i]} ${pathout[$i]}
3408	fi
3409
3410	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3411	then
3412
3413	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3414	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3415	# WIRD DANN KOPIERT
3416	# PER MOVE UMBENANNT WERDEN
3417	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3418	cp -r ${localout[$i]} ${pathout[$i]}
3419
3420	fi
3421	fi
3422	done
3423	if (( i != 0 ))
3424	then
3425	if [[ $transfer_problems = true ]]
3426	then
3427	printf "\n$striche\n *** OUTPUT-files saved"
3428	printf "\n +++ WARNING: some data transfers failed! \n"
3429	else
3430	printf "\n$striche\n *** all OUTPUT-files saved \n"
3431	fi
3432	fi
3433
3434
3435	# EVENTUELL FOLGEJOB STARTEN
3436	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3437	if [[ -f CONTINUE_RUN ]]
3438	then
3439
3440	if [[ $archive_save = true ]]
3441	then
3442
3443	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3444	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3445	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3446	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3447	# HANDEN
3448	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3449	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3450	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3451	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3452	then
3453	mc=`echo $mc \| sed 's/#/f/g'`
3454	fi
3455
3456
3457	# JOB STARTEN
3458	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3459	echo " $mc"
3460	printf "\n$striche\n"
3461	if [[ $localhost != $fromhost ]]
3462	then
3463
3464	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3465	then
3466	echo "*** ssh will be used to initiate restart-runs!"
3467	echo " return_addres=\"$return_addres\" "
3468	echo " return_username=\"$return_username\" "
3469	if [[ $return_addres = 172.20.25.41 ]]
3470	then
3471	# WORKAROUND AUF SCIROCCO AM TIT
3472	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3473	else
3474	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3475	fi
3476	else
3477	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3478	locat=restart; exit
3479	fi
3480
3481	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3482	# DER AKTUELLE JOB ENDET
3483	sleep 30
3484
3485	else
3486
3487	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3488	# RUFEN WERDEN, AUSSER AUF lcfimm
3489	cd $LOCAL_PWD
3490	if [[ $localhost = lcfimm ]]
3491	then
3492	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3493	else
3494	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3495	fi
3496	cd - > /dev/null
3497	fi
3498	printf "\n$striche\n *** restart-run initiated \n"
3499
3500
3501	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3502	# GEHOLT WORDEN SIND, LOESCHEN
3503	(( i = 0 ))
3504	while (( i < iin ))
3505	do
3506	(( i = i + 1 ))
3507	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3508	then
3509	rm -r $tmp_data_catalog/${frelin[$i]}
3510	fi
3511	done
3512
3513	else
3514
3515	printf "\n +++ no restart-run possible, since errors occured"
3516	printf "\n during the archive process"
3517	fi
3518
3519	fi
3520
3521
3522
3523	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3524	if [[ "$email_notification" != "" ]]
3525	then
3526
3527	if [[ $localhost != $fromhost ]]
3528	then
3529	if [[ -f CONTINUE_RUN ]]
3530	then
3531	echo "PALM restart run necessary" > email_text
3532	echo "description header of actual run:" >> email_text
3533	cat CONTINUE_RUN >> email_text
3534	echo "mrun-command to restart:" >> email_text
3535	echo "$mc" >> email_text
3536	else
3537	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3538	fi
3539	mail $email_notification < email_text
3540	printf "\n *** email notification sent to \"$email_notification\" "
3541	fi
3542	fi
3543
3544
3545
3546	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3547	cd $HOME
3548	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3549
3550	else
3551
3552
3553	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3554	# CHENDE AKTIONEN DURCHGEFUEHRT
3555
3556	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3557	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3558	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3559	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3560	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3561	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3562	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3563	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3564	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3565	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3566	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3567	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3568	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3569	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3570	if [[ $use_openmp = true ]]
3571	then
3572	mrun_com=${mrun_com}" -O"
3573	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3574	else
3575	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3576	fi
3577	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3578	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3579	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3580	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3581	[[ $node_usage != default && $node_usage != sla3 ]] && mrun_com=${mrun_com}" -n $node_usage"
3582	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3583	if [[ $do_remote = true ]]
3584	then
3585	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3586	fi
3587
3588
3589	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3590	jobfile=jobfile.$RANDOM
3591
3592
3593	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3594	echo "mkdir $TEMPDIR" >> $jobfile
3595	echo "cd $TEMPDIR" >> $jobfile
3596
3597
3598	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3599	if [[ $do_trace = true ]]
3600	then
3601	echo "set -x" >> $jobfile
3602	else
3603	echo "set +vx" >> $jobfile
3604	fi
3605
3606
3607	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3608	# SOWIE GEGEBENENFALLS DES MAKEFILES
3609	if [[ $do_compile = true ]]
3610	then
3611
3612	source_catalog=SOURCES_FOR_RUN_$fname
3613
3614	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3615	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3616	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3617	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3618	echo "export SOURCES_COMPLETE=true" >> $jobfile
3619	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3620
3621	for filename in $source_list
3622	do
3623	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3624	echo "cat > $filename << \"%END%\"" >> $jobfile
3625	cat $source_catalog/$filename >> $jobfile
3626	echo " " >> $jobfile
3627	echo "%END%" >> $jobfile
3628	echo " " >> $jobfile
3629	done
3630
3631	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3632	echo "cat > Makefile << \"%END%\"" >> $jobfile
3633	cat $source_catalog/Makefile >> $jobfile
3634	echo " " >> $jobfile
3635	echo "%END%" >> $jobfile
3636	echo " " >> $jobfile
3637
3638	echo "cd - > /dev/null" >> $jobfile
3639
3640	fi
3641
3642
3643	# ABSPEICHERN DER KONFIGURATIONSDATEI
3644	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3645	echo "cat > $config_file << \"%END%\"" >> $jobfile
3646	cat $config_file >> $jobfile
3647	echo "%END%" >> $jobfile
3648	echo " " >> $jobfile
3649
3650
3651	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3652	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3653	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3654	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3655	echo "%END%" >> $jobfile
3656	if [[ $host = lctit ]]
3657	then
3658	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3659	echo "mv mrun_new $mrun_script_name" >> $jobfile
3660	fi
3661	echo "chmod u+x $mrun_script_name" >> $jobfile
3662	echo "execute_mrun=true" >> $jobfile
3663	echo " " >> $jobfile
3664
3665	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3666	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3667	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3668	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3669	if [[ $do_remote = true ]]
3670	then
3671	(( i = 0 ))
3672	while (( i < iin ))
3673	do
3674	(( i = i + 1 ))
3675	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3676	if [[ "${transin[$i]}" = job ]]
3677	then
3678	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3679	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3680	echo " " >> $jobfile
3681	echo "%END%" >> $jobfile
3682	else
3683	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3684	fi
3685
3686	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3687	echo "if [[ \$? = 1 ]]" >> $jobfile
3688	echo "then" >> $jobfile
3689	echo " echo \" \" " >> $jobfile
3690	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3691	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3692	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3693	echo " execute_mrun=false" >> $jobfile
3694	echo "fi" >> $jobfile
3695	done
3696	fi
3697
3698	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3699	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3700	echo "LOCAL_PWD=$working_directory" >> $jobfile
3701	echo "export LOCAL_PWD" >> $jobfile
3702
3703	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3704	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3705	echo "export LOCAL_MRUN_PATH" >> $jobfile
3706
3707	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3708	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3709	then
3710	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3711	fi
3712
3713	# MRUN AUF ZIELRECHNER AUFRUFEN
3714	echo "set -x" >> $jobfile
3715	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3716
3717	echo 'ls -al; echo `pwd`' >> $jobfile
3718	echo "cd \$HOME" >> $jobfile
3719	echo "rm -rf $TEMPDIR" >> $jobfile
3720
3721
3722
3723
3724	# JOB PER SUBJOB STARTEN
3725	if [[ $silent = false ]]
3726	then
3727	printf "\n "
3728	else
3729	printf "\n\n"
3730	fi
3731
3732	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v $jobfile
3733	rm -rf $jobfile
3734
3735
3736	fi # ENDE REMOTE-TEIL
3737
3738
3739
3740	# ENDE DER PROZEDUR

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