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source: palm/trunk/SCRIPTS/mrun @ 109

Last change on this file since 109 was 109, checked in by letzel, 17 years ago

Bugfix in surface_coupler
mrun: completely remove workaround on lcfimm to propagate environment

variables out to the nodes in coupled mode

Property svn:keywords set to Rev

File size: 138.7 KB

Line
1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132
133
134	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
135
136	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
137	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
138	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
139
140	AddFilenames=""
141	additional_conditions=""
142	add_source_path=""
143	afname=""
144	archive_save=true
145	archive_system=none
146	compiler_name=""
147	cond1=""
148	cond2=""
149	config_file=.mrun.config
150	cpp_opts=""
151	cpp_options=""
152	cpumax=0
153	cpurest=0
154	delete_temporary_catalog=true
155	do_batch=false
156	do_compile=true
157	do_remote=false
158	do_stagein=true
159	do_stageout=true
160	do_trace=false
161	email_notification=""
162	exclude=""
163	executable=""
164	execution_error=false
165	fimm=false
166	fname=test
167	fromhost=""
168	global_revision=""
169	host=""
170	host_file=""
171	hp=""
172	ignore_archive_error=false
173	input_list=""
174	interpreted_config_file=""
175	job_on_file=""
176	keep_data_from_previous_run=false
177	localhost_realname=$(hostname)
178	local_compile=false
179	locat=normal
180	mainprog=""
181	makefile=""
182	mc=$0
183	while [[ $(echo $mc \| grep -c "/") != 0 ]]
184	do
185	mc=`echo $mc \| cut -f2- -d"/"`
186	done
187	module_files=""
188	mrun_script_name=$mc
189	netcdf_inc=""
190	netcdf_lib=""
191	netcdf_support=false
192	node_usage=default
193	numprocs=""
194	OOPT=""
195	openmp=false
196	output_list=""
197	package_list=""
198	punkte="..........................................................."
199	queue=none
200	read_from_config=""
201	restart_run=false
202	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
203	if [[ $return_addres = 130.75.105.158 ]]
204	then
205	return_addres=172.20.25.41
206	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
207	fi
208	# if [[ $return_addres = 210.117.65.1 ]]
209	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
210	# then
211	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
212	# fi
213	return_password=""
214	return_username=$LOGNAME
215	remotecall=false
216	remote_username=""
217	run_coupled_model=false
218	run_mode=""
219	scirocco=false
220	store_on_archive_system=true
221	striche=" ----------------------------------------------------------------------------"
222	silent=false
223	source_list=""
224	source_path=SOURCE
225	tasks_per_node=""
226	threads_per_task=1
227	tmpcreate=false
228	tmp_data_catalog=""
229	transfer_problems=false
230	usern=$LOGNAME
231	working_directory=`pwd`
232	TOPT=""
233	XOPT=""
234	zeit=$( date \| cut -c 12-19 )
235
236	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
237	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
238
239	typeset -R30 calltime
240	typeset -L20 spalte1
241	typeset -L40 spalte2
242	typeset -L60 spalte3
243	typeset -L35 string1=`date`
244	typeset -L12 string2=$usern
245	typeset -L12 string3=$localhost_realname
246	typeset -L12 string4
247	typeset -L12 string5
248	typeset -L30 version="MRUN 2.0 Rev$Rev: 109 $"
249
250
251
252	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
253	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
254
255	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
256	# EXPORTIERT WERDEN
257	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
258	export input_list memory numprocs output_list queue run_mode
259
260
261
262	# FEHLERBEHANDLUNG
263	# BEI EXIT:
264	trap 'rm -rf $working_directory/tmp_mrun
265	if [[ $locat != localhost ]]
266	then
267	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
268	# then
269	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
270	#MRUN-calls on $localhost
271	#
272	#date and time user localhost remotehost termination mrun-command
273	#--------------------------------------------------------------------------------------------------------------------
274	#%STATEND%
275	# chmod 666 ${mrun_path}/statistik/mrun_statistik
276	# fi
277	#
278	# # EINTRAG IN DIE STATISTIK-DATEI
279	# string4=$host
280	# string5=$locat
281	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
282	# then
283	# if [[ $do_batch = true ]]
284	# then
285	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
286	# else
287	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
288	# fi
289	# fi
290	echo " " > /dev/null
291	fi
292
293	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
294	then
295
296	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
297	(( i = 0 ))
298	while (( i < iec ))
299	do
300	(( i = i + 1 ))
301	printf "\n *** Execution of ERROR-command:\n"
302	printf " >>> ${err_command[$i]}\n"
303	eval ${err_command[$i]}
304	done
305	if [[ -n $interpreted_config_file ]] then
306	rm -rf $interpreted_config_file
307	fi
308	if [[ -n .mrun_environment ]] then
309	rm -rf .mrun_environment
310	fi
311	if [[ $tmpcreate = true ]]
312	then
313	printf "\n *** Contents of \"$TEMPDIR\":\n"
314	ls -al; cd
315	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
316	fi
317	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
318	then
319	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
320	fi
321	printf "\n\n+++ MRUN killed \n\n"
322	elif [[ $locat != control_c ]]
323	then
324	printf "\n\n --> all actions finished\n\n"
325	printf " Bye, bye $usern !!\n\n"
326	fi' exit
327
328
329	# BEI TERMINAL-BREAK:
330	trap 'rm -rf $working_directory/tmp_mrun
331	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
332	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
333	then
334	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
335	fi
336	printf "\n+++ MRUN killed by \"^C\" \n\n"
337	locat=control_c
338	exit
339	' 2
340
341
342	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
343	# BEEN SET
344	if [[ "$PALM_BIN" = "" ]]
345	then
346	printf "\n +++ environment variable PALM_BIN has not been set"
347	printf "\n please set it to the directory where the PALM scripts are located"
348	locat=palm_bin; exit
349	fi
350
351
352
353	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
354	# FUER FOLGEJOBS BENOETIGT WIRD
355	while getopts :a:AbBc:Cd:D:FG:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
356	do
357	case $option in
358	(a) afname=$OPTARG;;
359	(A) store_on_archive_system=false; mc="$mc -A";;
360	(b) do_batch=true; mc="$mc -b";;
361	(B) delete_temporary_catalog=false; mc="$mc -B";;
362	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
363	(C) restart_run=true; mc="$mc -C";;
364	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
365	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
366	(F) job_on_file="-D"; mc="$mc -F";;
367	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
368	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
369	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
370	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
371	(I) ignore_archive_error=true; mc="$mc -I";;
372	(k) keep_data_from_previous_run=true; mc="$mc -k";;
373	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
374	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
375	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
376	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
377	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
378	(O) use_openmp=true; mc="$mc -O";;
379	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
380	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
381	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
382	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
383	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
384	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
385	(S) read_from_config=false; mc="$mc -S";;
386	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
387	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
388	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
389	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
390	(v) silent=true; mc="$mc -v";;
391	(x) do_trace=true;set -x; mc="$mc -x";;
392	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
393	(Y) run_coupled_model=true; mc="$mc -Y";;
394	(\?) printf "\n +++ unknown option $OPTARG \n"
395	printf "\n --> type \"$0 ?\" for available options \n"
396	locat=parameter;exit;;
397	esac
398	done
399
400
401	# EVTL. POSITIONSPARAMETER EINLESEN
402	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
403	shift OPTIND-1
404
405
406	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
407	if [[ "$1" = "?" ]]
408	then
409	(printf "\n *** mrun can be called as follows:\n"
410	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
411	printf "\n Description of available options:\n"
412	printf "\n Option Description Default-Value"
413	printf "\n -a base name of input files equiv. -d"
414	printf "\n -A no archiving when using file-attribute fl"
415	printf "\n -b batch-job on local machine ---"
416	printf "\n -B do not delete temporary directory at end ---"
417	printf "\n -c configuration file .mrun.config"
418	printf "\n -d base name of files attached to program test"
419	printf "\n -D preprocessor(cpp)-directives \"\" "
420	printf "\n -F create remote job file only ---"
421	printf "\n -h execution host $localhost_realname"
422	printf "\n -i INPUT control list \"\" "
423	printf "\n -I archiving errors of previous batch-jobs"
424	printf "\n will be ignored"
425	printf "\n -k keep data from previous run"
426	printf "\n -K additional conditions for controling"
427	printf "\n usage of conditional code and"
428	printf "\n env-variables in configuration file \"\" "
429	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
430	printf "\n -M Makefile name Makefile"
431	printf "\n -n node usage (shared/not_shared) depending on -h"
432	printf "\n -o OUTPUT control list \"\" "
433	printf "\n -O use OpenMP ---"
434	printf "\n -p software package list \"\" "
435	printf "\n -q queue \"$queue\" "
436	printf "\n -r run control list (combines -i -o) \"\" "
437	printf "\n -s filenames of routines to be compiled \"\" "
438	printf "\n must end with .f, .f90, .F, or .c !"
439	printf "\n use \"..\" for more than one file and wildcards"
440	printf "\n -s TEST compiles all files with w-permit"
441	printf "\n -S config file interpreted by shellscript ---"
442	printf "\n -t allowed cpu-time in seconds (batch) 0"
443	printf "\n -T tasks per node depending on -h"
444	printf "\n -u username on remote machine \"\" "
445	printf "\n -v no prompt for confirmation ---"
446	printf "\n -x tracing of mrun for debug purposes ---"
447	printf "\n -X # of processors (on parallel machines) 1"
448	printf "\n -Y run coupled model ---"
449	printf "\n "
450	printf "\n Possible values of positional parameter <modus>:"
451	printf "\n \"?\" - this outline \n\n") \| more
452	exit
453	elif [[ "$1" != "" ]]
454	then
455	printf "\n +++ positional parameter $1 unknown \n"
456	locat=parameter; exit
457	fi
458
459
460
461	# KURZE STARTMELDUNG
462	printf "\n*** $version "
463	printf "\n will be executed. Please wait ..."
464
465
466
467	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
468	if [[ ! -f $config_file ]]
469	then
470	printf "\n\n +++ configuration file: "
471	printf "\n $config_file"
472	printf "\n does not exist"
473	locat=connect; exit
474	fi
475
476
477	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
478	line=""
479	grep "%host_identifier" $config_file > tmp_mrun
480	while read line
481	do
482	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
483	then
484	HOSTNAME=`echo $line \| cut -d" " -s -f2`
485	host_identifier=`echo $line \| cut -d" " -s -f3`
486	if [[ $localhost_realname = $HOSTNAME ]]
487	then
488	localhost=$host_identifier
489	break
490	fi
491	fi
492	done < tmp_mrun
493
494	if [[ "$localhost" = "" ]]
495	then
496	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
497	printf "\n for local host \"$localhost_realname\"."
498	printf "\n Please add line"
499	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
500	printf "\n to the configuration file."
501	locat=localhost; exit
502	fi
503
504
505
506	# HOSTSPEZIFISCHE VARIABLEN SETZEN
507	case $localhost_realname in
508	(breg-en0\|berni-en0) archive_system=tivoli;;
509	(cs*) archive_system=ut;;
510	(fimm.bccs.uib.no) fimm=true;;
511	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
512	(hreg-en0\|hanni-en0) archive_system=tivoli;;
513	(scirocco) scirocco=true;;
514	esac
515
516
517
518	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
519	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
520	[[ "$afname" = "" ]] && afname=$fname
521
522
523	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
524	if [[ "$run_mode" != "" ]]
525	then
526	input_list="$input_list $run_mode"
527	output_list="$output_list $run_mode"
528	fi
529
530
531	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
532	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
533	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
534	# STARTET)
535	if [[ "$fromhost" = "" ]]
536	then
537	fromhost=$localhost
538	fi
539
540
541	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
542	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
543	then
544	source_list=TEST
545	local_compile=true
546	host=$localhost
547	fi
548
549
550	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
551	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
552	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
553	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
554	if [[ -n $host && "$host" != $localhost ]]
555	then
556	do_batch=true
557	do_remote=true
558	case $host in
559	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
560	(*) printf "\n"
561	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
562	printf "\n is not available"
563	locat=nqs; (( iec = 0 )); exit;;
564	esac
565	else
566	host=$localhost
567	fi
568
569
570	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
571	if [[ -n $additional_conditions ]]
572	then
573	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
574	cond1=`echo $additional_conditions \| cut -d" " -f1`
575	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
576	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
577	if [[ -n $dummy ]]
578	then
579	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
580	locat=options; exit
581	fi
582	fi
583
584
585	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
586	# ARCHIVIERUNG FEHLGESCHLAGEN IST
587	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
588	then
589	if [[ $ignore_archive_error = false ]]
590	then
591	printf "\n +++ data archiving of previous run failed"
592	printf "\n see directory \~/job_queue on remote machine"
593	locat=archive; exit
594	else
595	printf "\n +++ warning: data archiving in a previous run failed"
596	printf "\n MRUN continues, trying to get backup copy"
597	fi
598	fi
599
600
601
602	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
603	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
604	if [[ "$read_from_config" = false ]]
605	then
606
607	[[ $silent = false ]] && printf "\n Reading the configuration file... "
608	while read zeile
609	do
610	[[ $silent = false ]] && printf "."
611
612
613	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
614	# ERSETZEN
615	eval zeile=\"$zeile\"
616
617
618	# INTERPRETATION DER ZEILE
619	if [[ "$(echo $zeile)" = "" ]]
620	then
621	# LEERZEILE, KEINE AKTION
622	continue
623
624	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
625	then
626
627	# ZEILE IST KOMMENTARZEILE
628	true
629
630	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
631	then
632
633	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
634	zeile=$(echo $zeile \| cut -c2-)
635	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
636	var=`echo $zeile \| cut -d" " -f1`
637	value=`echo $zeile \| cut -d" " -s -f2`
638	for_host=`echo $zeile \| cut -d" " -s -f3`
639	for_cond1=`echo $zeile \| cut -d" " -s -f4`
640	for_cond2=`echo $zeile \| cut -d" " -s -f5`
641
642	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
643	then
644
645	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
646	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
647	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
648
649
650	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
651	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
652	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
653	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
654	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
655	# KONFIGURATIONSDATEI
656	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
657	then
658	eval $var=\$value
659
660	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
661	if [[ $do_trace = true ]]
662	then
663	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
664	fi
665	fi
666
667	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
668	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
669	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
670	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
671	if [[ $var = host ]]
672	then
673	if [[ -n $host && "$host" != $localhost ]]
674	then
675	do_batch=true
676	do_remote=true
677	case $host in
678	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
679	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
680	printf "\n is not available"
681	locat=nqs; exit;;
682	esac
683	else
684	host=$localhost
685	fi
686	fi
687
688	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
689	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
690	# DEN PROGRAMMEN BENOETIGT WERDEN
691	export $var
692	fi
693
694
695
696
697	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
698	then
699
700	# ZEILE DEFINIERT ERROR-KOMMANDO
701	(( iec = iec + 1 ))
702	zeile=$(echo $zeile \| cut -c4-)
703	err_command[$iec]="$zeile"
704
705	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
706	then
707
708	# ZEILE DEFINIERT INPUT-KOMMANDO
709	(( iic = iic + 1 ))
710	zeile=$(echo $zeile \| cut -c4-)
711	in_command[$iic]="$zeile"
712
713	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
714	then
715
716	# ZEILE DEFINIERT OUTPUT-KOMMANDO
717	(( ioc = ioc + 1 ))
718	zeile=$(echo $zeile \| cut -c4-)
719	out_command[$ioc]="$zeile"
720
721	else
722
723	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
724	# s2a: in/out - Feld
725	# s2b: loc - Feld (optional)
726	# s2c: tr/ar - Feld (optional)
727	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
728	s1=`echo $zeile \| cut -d" " -f1`
729	s2=`echo $zeile \| cut -d" " -s -f2`
730	s2a=$(echo $s2 \| cut -d":" -f1)
731	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
732	then
733	s2b=""
734	s2c=""
735	else
736	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
737	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
738	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
739	fi
740	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
741	s3=`echo $zeile \| cut -d" " -f3`
742	s4=`echo $zeile \| cut -d" " -s -f4`
743	s5=`echo $zeile \| cut -d" " -s -f5`
744	s6=`echo $zeile \| cut -d" " -s -f6`
745
746
747	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
748	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
749	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
750	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
751	# HANDEN SEIN MUSS (D.H. s2b = loc)
752	IFSALT="$IFS"; IFS="$IFS:"
753	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
754	then
755	found=false
756	for actual in $input_list
757	do
758	for formal in $s3
759	do
760	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
761	done
762	done
763	if [[ $found = true ]]
764	then
765	(( iin = iin + 1 ))
766	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
767	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
768	extin[$iin]=$s6
769	fi
770	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
771	then
772	found=false
773	for actual in $output_list
774	do
775	for formal in $s3
776	do
777	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
778	done
779	done
780	if [[ $found = true ]]
781	then
782	(( iout = iout + 1 ))
783	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
784	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
785	fi
786	elif [[ "$s2a" != in && "$s2a" != out ]]
787	then
788	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
789	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
790	locat=connect; exit
791	fi
792	IFS="$IFSALT"
793	fi
794	done < $config_file
795
796	else
797
798
799	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
800	[[ $silent = false ]] && printf "..."
801	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
802	export interpreted_config_file=.icf.$RANDOM
803
804
805
806	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
807	# VERFUEGUNG STELLEN
808	cat > .mrun_environment << %%END%%
809	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
810	config_file = '$config_file', do_remote = '$do_remote',
811	do_trace = '$do_trace', host = '$host',
812	input_list = '$input_list', icf = '$interpreted_config_file',
813	localhost = '$localhost', output_list = '$output_list' /
814
815	%%END%%
816
817	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
818	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
819	mrun_memory=$memory
820	mrun_cpumax=$cpumax
821	mrun_numprocs=$numprocs
822
823	if [[ $localhost_realname = "gate" ]]
824	then
825	interpret_config_gate.x
826	else
827	interpret_config.x
828	fi
829	rm .mrun_environment
830
831
832	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
833	chmod u+x $interpreted_config_file
834	export PATH=$PATH:.
835	. $interpreted_config_file
836	rm $interpreted_config_file
837
838
839	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
840	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
841	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
842	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
843
844	fi
845
846
847	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
848	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
849	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
850	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
851	if [[ "$SOURCES_COMPLETE" = "" ]]
852	then
853
854	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
855	# VEREINBART WURDE
856	source_path=""
857	line=""
858	grep "%source_path" $config_file > tmp_mrun
859	while read line
860	do
861	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
862	then
863	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
864	then
865	global_source_path=`echo $line \| cut -d" " -f2`
866	fi
867	fi
868	done < tmp_mrun
869
870	line=""
871	found=false
872	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
873	while read line
874	do
875	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
876	then
877	if [[ $found = true ]]
878	then
879	printf "\n\n +++ more than one source path found in configuration file"
880	printf "\n for local host \"$localhost\" "
881	locat=source_path; exit
882	fi
883	source_path=`echo $line \| cut -d" " -f2`
884	found=true
885	fi
886	done < tmp_mrun
887	rm tmp_mrun
888
889	if [[ "$source_path" = "" ]]
890	then
891	if [[ "$global_source_path" != "" ]]
892	then
893	source_path=$global_source_path
894	else
895	printf "\n\n +++ no source path found in configuration file"
896	printf "\n for local host \"$localhost\" "
897	locat=source_path; exit
898	fi
899	fi
900	eval source_path=$source_path
901
902	if [[ ! -d $source_path ]]
903	then
904	printf "\n\n +++ source path \"$source_path\" on local host"
905	printf "\n \"$localhost\" does not exist"
906	locat=source_path; exit
907	fi
908
909	fi
910
911
912	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
913	# DURCH OPTION -G MITGETEILT)
914	if [[ "$global_revision" = "" ]]
915	then
916	global_revision=`svnversion $source_path 2>/dev/null`
917	global_revision="Rev: $global_revision"
918	fi
919
920
921	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
922	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
923	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
924	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
925	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
926	if [[ -n $host && "$host" != $localhost ]]
927	then
928	do_batch=true
929	do_remote=true
930	case $host in
931	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
932	(*) printf "\n"
933	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
934	printf "\n is not available"
935	locat=nqs; (( iec = 0 )); exit;;
936	esac
937	else
938	host=$localhost
939	fi
940
941
942	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
943	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
944	then
945
946	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
947	if [[ ! -n $numprocs ]]
948	then
949	printf "\n"
950	printf "\n +++ option \"-K parallel\" requires additional specification"
951	printf "\n of the number of processors to be used by"
952	printf "\n mrun-option \"-X\" or by environment-variable"
953	printf "\n \"numprocs\" in the configuration file"
954	locat=numprocs; (( iec = 0 )); exit
955	fi
956
957	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
958	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
959	# GESAMTPROZESSORANZAHL IST
960	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
961	then
962	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
963	(( ival = $tasks_per_node ))
964	(( pes = numprocs ))
965	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
966	# then
967	# (( pes = pes - 1 ))
968	# fi
969	(( ii = pes / ival ))
970	if (( pes - ii * ival > 0 ))
971	then
972	printf "\n"
973	printf "\n +++ tasks per node (option \"-T\") must be an integral"
974	printf "\n divisor of the total number of processors (option \"-X\")"
975	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
976	locat=tasks_per_node; (( iec = 0 )); exit
977	fi
978	fi
979
980	# IBMY HAT NUR EINEN KNOTEN
981	if [[ $host = ibmy ]]
982	then
983	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
984	then
985	printf "\n"
986	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
987	printf "\n total number of processors (option \"-X\")"
988	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
989	locat=tasks_per_node; (( iec = 0 )); exit
990	fi
991	fi
992
993	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
994	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
995	if [[ $use_openmp = true ]]
996	then
997	threads_per_task=$tasks_per_node
998	tasks_per_node=1
999	fi
1000	OOPT="-O $threads_per_task"
1001	TOPT="-T $tasks_per_node"
1002
1003	# GESAMTZAHL DER KNOTEN BESTIMMEN
1004	if [[ "$tasks_per_node" != "" ]]
1005	then
1006	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1007	fi
1008
1009	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1010	# SETZEN
1011	if [[ $node_usage = default ]]
1012	then
1013	if [[ $host = ibms ]]
1014	then
1015	node_usage=shared
1016	else
1017	node_usage=not_shared
1018	fi
1019	fi
1020	if [[ $node_usage != shared && $node_usage != not_shared ]]
1021	then
1022	printf "\n"
1023	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1024	printf "\n \"shared\" or \"not_shared\""
1025	locat=tasks_per_node; (( iec = 0 )); exit
1026	fi
1027
1028	fi
1029
1030	# PRUEFEN, OB HOSTFILE EXISTIERT
1031	if [[ -n $hostfile ]]
1032	then
1033	if [[ ! -f $hostfile ]]
1034	then
1035	printf "\n"
1036	printf "\n +++ hostfile \"$hostfile\" does not exist"
1037	locat=hostfile; exit
1038	fi
1039	fi
1040
1041	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1042	if [[ $host = ibmy && $do_remote = false ]]
1043	then
1044	if [[ ! -f $HOME/.rhosts ]]
1045	then
1046	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1047	printf "\n\n *** file:"
1048	printf "\n $HOME/.rhosts"
1049	printf "\n was created\n"
1050	fi
1051	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1052	then
1053	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1054	printf "\n\n *** file:"
1055	printf "\n $HOME/.rhosts"
1056	printf "\n was extended by the name of the current host\n"
1057	fi
1058	fi
1059
1060
1061
1062	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1063	if [[ $queue = none ]]
1064	then
1065	case $host in
1066	(ibmb) if [[ $node_usage = shared ]]
1067	then
1068	queue=cshare
1069	else
1070	queue=csolo
1071	fi;;
1072	(ibmh) if [[ $node_usage = shared ]]
1073	then
1074	queue=cshare
1075	else
1076	queue=csolo
1077	fi;;
1078	(ibmy) queue=parallel;;
1079	(lctit) queue=default;;
1080	(nech) queue=none;;
1081	(neck) queue=P;;
1082	(unics) queue=unics;;
1083	esac
1084	fi
1085
1086
1087	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1088	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1089	# ERMITTELN
1090	(( i = 0 ))
1091	while (( i < iin ))
1092	do
1093	(( i = i + 1 ))
1094	(( maxcycle = 0 ))
1095
1096	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1097	if [[ "${actionin[$i]}" = di ]]
1098	then
1099	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1100	# REM-MASCHINE AUSWERTEN
1101	eval filename=${pathin[$i]}/${endin[$i]}
1102	else
1103	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1104	# REM-MASCHINE AUSWERTEN
1105	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1106	fi
1107
1108	# PRUEFEN AUF VORHANDENSEIN
1109	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1110	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1111	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1112	then
1113	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1114	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1115	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1116	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1117	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1118	if [[ "${transin[$i]}" != "locopt" ]]
1119	then
1120	printf "\n\n +++ INPUT-file: "
1121	if [[ "${extin[$i]}" = "" ]]
1122	then
1123	printf "\n $filename"
1124	else
1125	printf "\n $filename.${extin[$i]}"
1126	fi
1127	printf "\n does not exist\n"
1128	locat=input; exit
1129	else
1130	transin[$i]="unavailable"
1131	fi
1132	else
1133
1134	# ZYKLUSNUMMER FESTSTELLEN
1135	ls -1 -d $filename > filelist 2>/dev/null
1136	ls -1 -d $filename.* >> filelist 2>/dev/null
1137	while read zeile
1138	do
1139	cycle=$(print $zeile \| cut -f2 -d".")
1140	if [[ "$cycle" = "$zeile" ]]
1141	then
1142	(( icycle = 0 ))
1143	elif [[ "$cycle" = "${extin[$i]}" ]]
1144	then
1145	(( icycle = 0 ))
1146	else
1147	(( icycle = $cycle ))
1148	fi
1149	if (( icycle > maxcycle ))
1150	then
1151	(( maxcycle = icycle ))
1152	file_to_be_used=$zeile
1153	fi
1154	done <filelist
1155	rm filelist
1156
1157	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1158	if (( maxcycle > 0 ))
1159	then
1160	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1161	then
1162	filename=${filename}.$maxcycle.${extin[$i]}
1163	else
1164	filename=${filename}.$maxcycle
1165	fi
1166	else
1167	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1168	then
1169	filename=${filename}.${extin[$i]}
1170	fi
1171	fi
1172
1173	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1174	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1175	absnamein[$i]=$filename
1176	if (( maxcycle > 0 ))
1177	then
1178	if [[ "${actionin[$i]}" = di ]]
1179	then
1180	frelin[$i]=${endin[$i]}.$maxcycle
1181	else
1182	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1183	fi
1184	else
1185	if [[ "${actionin[$i]}" = di ]]
1186	then
1187	frelin[$i]=${endin[$i]}
1188	else
1189	frelin[$i]=${afname}${endin[$i]}
1190	fi
1191	fi
1192
1193	fi
1194	done
1195
1196
1197	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1198	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1199	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1200	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1201	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1202	(( i = 0 ))
1203	while (( i < iout ))
1204	do
1205	(( i = i + 1 ))
1206	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1207	then
1208	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1209	then
1210	actionout[$i]=""
1211	elif [[ "${actionout[$i]}" = tra ]]
1212	then
1213	actionout[$i]=a
1214	fi
1215	(( maxcycle = 0 ))
1216	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1217	eval catalogname=${pathout[$i]}
1218	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1219	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1220	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1221	then
1222
1223	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1224	if cat /dev/null > $filename
1225	then
1226	rm $filename
1227	else
1228
1229	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1230	if [[ ! -d $catalogname ]]
1231	then
1232	if mkdir -p $catalogname
1233	then
1234	printf "\n\n *** directory:"
1235	printf "\n $catalogname"
1236	printf "\n was created\n"
1237	else
1238	printf "\n\n +++ OUTPUT-file:"
1239	printf "\n $filename"
1240	printf "\n cannot be created, because directory does not exist"
1241	printf "\n and cannot be created either"
1242	printf "\n"
1243	locat=output ; exit
1244	fi 2>/dev/null
1245	else
1246	printf "\n\n +++ OUTPUT-file:"
1247	printf "\n $filename"
1248	printf "\n cannot be created, although directory exists"
1249	printf "\n"
1250	locat=output ; exit
1251	fi
1252	fi 2>/dev/null
1253	else
1254
1255	# ZYKLUSNUMMER FESTSTELLEN
1256	ls -1 -d $filename > filelist 2>/dev/null
1257	ls -1 -d $filename.* >> filelist 2>/dev/null
1258	while read zeile
1259	do
1260	cycle=$(print $zeile \| cut -f2 -d".")
1261	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1262	then
1263	(( icycle = 1 ))
1264	else
1265	(( icycle = $cycle + 1 ))
1266	fi
1267	if (( icycle > maxcycle ))
1268	then
1269	(( maxcycle = icycle ))
1270	fi
1271	done <filelist
1272	rm filelist
1273	fi
1274
1275	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1276	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1277	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1278	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1279	if [[ "${actionout[$i]}" != a ]]
1280	then
1281	if (( maxcycle > 0 ))
1282	then
1283	filename=${filename}.$maxcycle
1284	if cat /dev/null > $filename
1285	then
1286	rm $filename
1287	else
1288	printf "\n +++ OUTPUT-file:"
1289	printf "\n $filename"
1290	printf "\n cannot be created"
1291	locat=output ; exit
1292	fi
1293	fi
1294	else
1295	(( maxcycle = maxcycle - 1 ))
1296	if (( maxcycle > 0 ))
1297	then
1298	filename=${filename}.$maxcycle
1299	fi
1300	fi
1301
1302	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1303	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1304	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1305	pathout[$i]=$filename
1306	if (( maxcycle > 0 ))
1307	then
1308	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1309	else
1310	frelout[$i]=${fname}${endout[$i]}
1311	fi
1312
1313	fi
1314	done
1315
1316
1317	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1318	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1319	then
1320	if [[ "$dvrp_inc" = "" ]]
1321	then
1322	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1323	printf "\n This is required for the dvrp_graphics package.\n"
1324	locat=dvrp; exit
1325	fi
1326	if [[ "$dvrp_lib" = "" ]]
1327	then
1328	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1329	printf "\n This is required for the dvrp_graphics package.\n"
1330	locat=dvrp; exit
1331	fi
1332	fi
1333
1334
1335	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1336	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1337	# UEBERSETZT ZU WERDEN)
1338	if [[ "$mainprog" = "" && "$executable" = "" ]]
1339	then
1340	printf "\n +++ neither main program nor executable defined"
1341	locat=source; exit
1342	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1343	then
1344	printf "\n +++ main program as well as executable defined"
1345	locat=source; exit
1346	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1347	then
1348	do_compile=false
1349	fi
1350
1351
1352	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1353	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1354	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1355	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1356	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1357	then
1358
1359	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1360	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1361
1362	if [[ $restart_run != true ]]
1363	then
1364	rm -rf SOURCES_FOR_RUN_$fname
1365	mkdir SOURCES_FOR_RUN_$fname
1366	fi
1367
1368
1369	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1370	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1371	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1372	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1373	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1374	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1375	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1376	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1377	# GESAMMELT
1378	if [[ "$source_list" = WRITE_PERMIT ]]
1379	then
1380
1381	source_list=""
1382	cd $source_path
1383
1384
1385	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1386	Names=$(ls -1 *.f90 2>&1)
1387	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1388	Names=$(ls -1 *.F90 2>&1)
1389	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1390	Names=$(ls -1 *.F 2>&1)
1391	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1392	Names=$(ls -1 *.f 2>&1)
1393	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1394	Names=$(ls -1 *.c 2>&1)
1395	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1396
1397
1398	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1399	for dateiname in $Filenames
1400	do
1401	if [[ -w $dateiname ]]
1402	then
1403	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1404	then
1405	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1406	source_list=$source_list"$dateiname "
1407	fi
1408	fi
1409	done
1410
1411	cd - > /dev/null
1412
1413
1414	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1415	then
1416
1417	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1418	source_list=""
1419	cd $source_path
1420
1421
1422	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1423	if [[ ! -d .svn ]]
1424	then
1425	printf "\n\n +++ source directory"
1426	printf "\n \"$source_path\" "
1427	printf "\n is not under control of \"subversion\"."
1428	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1429	fi
1430
1431
1432	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1433	Filenames=""
1434	svn status > tmp_mrun
1435	while read line
1436	do
1437	firstc=`echo $line \| cut -c1`
1438	if [[ $firstc = M \|\| $firstc = "?" ]]
1439	then
1440	Name=`echo "$line" \| cut -c8-`
1441	extension=`echo $Name \| cut -d. -f2`
1442	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1443	then
1444	Filenames="$Filenames "$Name
1445	fi
1446	fi
1447	done < tmp_mrun
1448
1449
1450	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1451	for dateiname in $Filenames
1452	do
1453	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1454	source_list=$source_list"$dateiname "
1455	done
1456
1457	cd - > /dev/null
1458
1459
1460	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1461	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1462	# VORHANDEN
1463	elif [[ "$source_list" != "" && $restart_run != true ]]
1464	then
1465
1466	cd $source_path
1467
1468	for filename in $source_list
1469	do
1470
1471	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1472	if [[ $(print $filename \| grep -c "/") != 0 ]]
1473	then
1474	printf "\n +++ source code file: $filename"
1475	printf "\n must not contain (\"/\") "
1476	locat=source; exit
1477	fi
1478
1479	if [[ ! -f $filename ]]
1480	then
1481	printf "\n +++ source code file: $filename"
1482	printf "\n does not exist"
1483	locat=source; exit
1484	else
1485	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1486	fi
1487
1488	done
1489
1490	cd - > /dev/null
1491
1492	fi
1493
1494
1495	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1496	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1497	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1498	if [[ $restart_run != true ]]
1499	then
1500
1501	if [[ ! -f "$source_path/$mainprog" ]]
1502	then
1503	printf "\n\n +++ main program: $mainprog"
1504	printf "\n does not exist in source directory"
1505	printf "\n \"$source_path\"\n"
1506	locat=source; exit
1507	else
1508	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1509	then
1510	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1511	source_list=${mainprog}" $source_list"
1512	fi
1513	fi
1514	fi
1515
1516
1517	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1518	if [[ $restart_run != true && "$add_source_path" != "" ]]
1519	then
1520
1521	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1522	if [[ ! -d $add_source_path ]]
1523	then
1524	printf "\n\n +++ WARNING: additional source code directory"
1525	printf "\n \"$add_source_path\" "
1526	printf "\n does not exist or is not a directory."
1527	printf "\n No source code will be used from this directory!\n"
1528	add_source_path=""
1529	sleep 3
1530	else
1531
1532	cd $add_source_path
1533
1534	Names=$(ls -1 *.f90 2>&1)
1535	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1536	Names=$(ls -1 *.F90 2>&1)
1537	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1538	Names=$(ls -1 *.F 2>&1)
1539	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1540	Names=$(ls -1 *.f 2>&1)
1541	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1542	Names=$(ls -1 *.c 2>&1)
1543	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1544
1545	cd - > /dev/null
1546	cd SOURCES_FOR_RUN_$fname
1547
1548	for dateiname in $AddFilenames
1549	do
1550	if [[ -f $dateiname ]]
1551	then
1552	printf "\n +++ source code file \"$dateiname\" found in additional"
1553	printf "\n source code directory \"$add_source_path\" "
1554	printf "\n as well as in directory \"$source_path\"."
1555	locat=source; exit
1556	fi
1557
1558	cp $add_source_path/$dateiname .
1559	source_list="$source_list $dateiname"
1560
1561	# Default User-Interface von der Liste entfernen, falls Datei
1562	# ein User-Interface enthaelt
1563	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1564	then
1565	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1566	then
1567	rm -rf user_interface.f90
1568	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1569	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1570	printf "\n since a user-interface is found in file"
1571	printf "\n \"$add_source_path/$dateiname\" \n"
1572	sleep 3
1573	else
1574	printf "\n\n *** user-interface file \"$dateiname\" "
1575	printf "\n added to the files to be translated \n"
1576	sleep 3
1577	fi
1578	fi
1579	done
1580
1581	cd - > /dev/null
1582	fi
1583	fi
1584
1585
1586	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1587	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1588	if [[ $restart_run != true && -n $package_list ]]
1589	then
1590
1591	cd $source_path
1592
1593	for package in $package_list
1594	do
1595
1596	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1597
1598	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1599	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1600	# LIEFERT
1601	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1602
1603
1604	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1605	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1606	for source_list_name in $package_source_list
1607	do
1608	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1609	then
1610
1611	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1612	ending=`echo $source_list_name \| cut -f2 -d.`
1613	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1614	then
1615	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1616	source_list="$source_list $source_list_name"
1617	fi
1618	fi
1619	done
1620	done
1621
1622	cd - > /dev/null
1623	fi
1624
1625
1626	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1627	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1628	if [[ "$restart_run" != true ]]
1629	then
1630	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1631	if [[ ! -f $makefile ]]
1632	then
1633	printf "\n +++ file \"$makefile\" does not exist"
1634	locat=make; exit
1635	else
1636	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1637	fi
1638	fi
1639
1640	fi # do_compile=true
1641
1642
1643	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1644	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1645	if [[ $do_compile = true ]]
1646	then
1647
1648	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1649	# ZUSAMMENSETZEN
1650	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1651	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1652	then
1653	cpp_options="${cpp_options},-D__ibm=__ibm"
1654	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1655	then
1656	cpp_options="$cpp_options -D__nec"
1657	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1658	then
1659	cpp_options="$cpp_options -D__lc"
1660	else
1661	cpp_options="$cpp_options -D__$localhost"
1662	fi
1663
1664	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1665	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1666	then
1667	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1668	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1669	else
1670	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1671	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1672	fi
1673
1674	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1675	if [[ -n $package_list ]]
1676	then
1677	for package in $package_list
1678	do
1679	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1680	then
1681	if [[ $package != "dvrp_graphics+1PE" ]]
1682	then
1683	cpp_options="${cpp_options},-D__$package=__$package"
1684	else
1685	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1686	export use_seperate_pe_for_dvrp_output=true
1687	fi
1688	else
1689	if [[ $package != "dvrp_graphics+1PE" ]]
1690	then
1691	cpp_options="$cpp_options -D__$package"
1692	else
1693	cpp_options="$cpp_options -D__dvrp_graphics"
1694	export use_seperate_pe_for_dvrp_output=true
1695	fi
1696	fi
1697	done
1698	fi
1699
1700	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1701	if [[ -n $cpp_opts ]]
1702	then
1703	for popts in $cpp_opts
1704	do
1705	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1706	then
1707	cpp_options="${cpp_options},-D__$popts=__$popts"
1708	else
1709	cpp_options="$cpp_options -D__$popts"
1710	fi
1711	done
1712	fi
1713
1714	else
1715
1716
1717	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1718	if [[ $do_remote = false ]]
1719	then
1720	if [[ ! -f $executable ]]
1721	then
1722	printf "\n +++ executable file: $executable"
1723	printf "\n does not exist"
1724	locat=executable; exit
1725	fi
1726	fi
1727	fi
1728
1729
1730	# JOBMODUS FESTSTELLEN
1731	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1732	then
1733	jobmo=BATCH
1734	else
1735	jobmo=INTERACTIVE
1736	fi
1737
1738
1739	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1740	# DURCH BENUTZER ANDERWEITIG VEREINBART
1741	if [[ "$compiler_name" = "" ]]
1742	then
1743
1744	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1745	locat=compiler_name; exit
1746
1747	fi
1748
1749
1750	# COMPILER AUF NECK UEBERSCHREIBEN
1751	[[ $localhost = neck ]] && compiler_name=mpif90
1752
1753
1754
1755	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1756	kennung=$RANDOM
1757	if [[ "$tmp_user_catalog" = "" ]]
1758	then
1759	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1760	then
1761	tmp_user_catalog=$TMPDIR
1762	elif [[ $localhost = nech ]]
1763	then
1764	tmp_user_catalog=$WRKSHR
1765	else
1766	tmp_user_catalog=/tmp
1767	fi
1768	fi
1769	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1770
1771
1772	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1773	# BESTIMMEN
1774	if [[ "$tmp_data_catalog" = "" ]]
1775	then
1776	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1777	then
1778	tmp_data_catalog=$WORK/mrun_restart_data
1779	elif [[ $localhost = nech ]]
1780	then
1781	tmp_data_catalog=$WRKSHR/mrun_restart_data
1782	else
1783	tmp_data_catalog=/tmp/mrun_restart_data
1784	fi
1785	fi
1786
1787
1788	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1789	# ERSETZEN
1790	if [[ $do_remote = false && $do_compile = true ]]
1791	then
1792	eval fopts=\"$fopts\"
1793	eval lopts=\"$lopts\"
1794	fi
1795
1796
1797
1798	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1799	fopts="$fopts $netcdf_inc $dvrp_inc"
1800	lopts="$lopts $netcdf_lib $dvrp_lib"
1801	ROPTS="$ropts"
1802	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit \|\| $host = lcfimm ) && -n $numprocs ]]
1803	then
1804	XOPT="-X $numprocs"
1805	fi
1806
1807
1808
1809	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1810	# GRAMM BENOETIGT
1811	done=false
1812	while [[ $done = false ]]
1813	do
1814	cputime=$cpumax
1815	if (( $cputime == 0 ))
1816	then
1817	printf "\n +++ cpu-time is undefined"
1818	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1819	printf "\n >>> "
1820	read cputime 1>/dev/null 2>&1
1821	else
1822	done=true
1823	fi
1824	cpumax=$cputime
1825	done
1826
1827	(( minuten = cputime / 60 ))
1828	(( sekunden = cputime - minuten * 60 ))
1829
1830
1831	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1832	if [[ $do_batch = true ]]
1833	then
1834	done=false
1835	while [[ $done = false ]]
1836	do
1837	if (( memory == 0 ))
1838	then
1839	printf "\n +++ memory demand is undefined"
1840	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1841	printf "\n >>> "
1842	read memory 1>/dev/null 2>&1
1843	else
1844	done=true
1845	fi
1846	done
1847	fi
1848
1849
1850	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1851	if [[ $do_remote = true && -z $remote_username ]]
1852	then
1853	while [[ -z $remote_username ]]
1854	do
1855	printf "\n +++ username on remote host \"$host\" is undefined"
1856	printf "\n >>> Please type username:"
1857	printf "\n >>> "
1858	read remote_username
1859	done
1860	mc="$mc -u$remote_username"
1861	fi
1862
1863	###########################################################################
1864	# HEADER-AUSGABE
1865	###########################################################################
1866
1867
1868	calltime=$(date)
1869	printf "\n"
1870	# [[ $silent = false ]] && clear
1871	printf "#--------------------------------------------------------------# \n"
1872	printf "\| $version$calltime \| \n"
1873	printf "\| \| \n"
1874	spalte1="called on:"; spalte2=$localhost_realname
1875	printf "\| $spalte1$spalte2 \| \n"
1876	if [[ $local_compile = false ]]
1877	then
1878	if [[ $do_remote = true ]]
1879	then
1880	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1881	else
1882	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1883	fi
1884	else
1885	spalte1="compiling test only!"; spalte2=""
1886	fi
1887	printf "\| $spalte1$spalte2 \| \n"
1888	if [[ -n $numprocs ]]
1889	then
1890	spalte1="number of PEs:"; spalte2=$numprocs
1891	printf "\| $spalte1$spalte2 \| \n"
1892	fi
1893	if [[ -n $tasks_per_node ]]
1894	then
1895	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1896	printf "\| $spalte1$spalte2 \| \n"
1897	fi
1898	if [[ $threads_per_task != 1 ]]
1899	then
1900	spalte1="threads per task:"; spalte2="$threads_per_task"
1901	printf "\| $spalte1$spalte2 \| \n"
1902	fi
1903	printf "\| \| \n"
1904	if [[ $do_compile = true ]]
1905	then
1906	spalte1=cpp-directives:; spalte2=$cpp_options
1907	printf "\| $spalte1$spalte2 \| \n"
1908	zeile=$(echo "$cpp_options" \| cut -c41-)
1909	while [[ "$zeile" != "" ]]
1910	do
1911	spalte1=""
1912	spalte2=$zeile
1913	printf "\| $spalte1$spalte2 \| \n"
1914	zeile=$(echo "$zeile" \| cut -c41-)
1915	done
1916
1917	spalte1=compiler-options:; spalte2="$fopts"
1918	printf "\| $spalte1$spalte2 \| \n"
1919	zeile=$(echo "$fopts" \| cut -c41-)
1920	while [[ "$zeile" != "" ]]
1921	do
1922	spalte1=""
1923	spalte2=$zeile
1924	printf "\| $spalte1$spalte2 \| \n"
1925	zeile=$(echo "$zeile" \| cut -c41-)
1926	done
1927
1928	spalte1=linker-options:; spalte2=$lopts
1929	printf "\| $spalte1$spalte2 \| \n"
1930	zeile=$(echo "$lopts" \| cut -c41-)
1931	while [[ "$zeile" != "" ]]
1932	do
1933	spalte1=""
1934	spalte2=$zeile
1935	printf "\| $spalte1$spalte2 \| \n"
1936	zeile=$(echo "$zeile" \| cut -c41-)
1937	done
1938
1939	spalte1="main program":; spalte2=$mainprog
1940	printf "\| $spalte1$spalte2 \| \n"
1941	else
1942	spalte1=executable:; spalte2=$executable
1943	printf "\| $spalte1$spalte2 \| \n"
1944	fi
1945	printf "\| \| \n"
1946	spalte1="base name of files":; spalte2=$fname
1947	printf "\| $spalte1$spalte2 \| \n"
1948	if [[ $fname != $afname ]]
1949	then
1950	spalte1="base name of input files":; spalte2=$afname
1951	printf "\| $spalte1$spalte2 \| \n"
1952	fi
1953	spalte1="INPUT control list":; spalte2=$input_list
1954	printf "\| $spalte1$spalte2 \| \n"
1955	spalte1="OUTPUT control list":; spalte2=$output_list
1956	printf "\| $spalte1$spalte2 \| \n"
1957
1958	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
1959	then
1960	spalte1="memory demand / PE":; spalte2="$memory MB"
1961	printf "\| $spalte1$spalte2 \| \n"
1962	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
1963	printf "\| $spalte1$spalte2 \| \n"
1964	fi
1965
1966	if [[ $do_compile = true ]]
1967	then
1968	printf "\| \| \n"
1969	printf "\| Files to be compiled: \| \n"
1970	zeile=$source_list
1971	while [[ "$zeile" != "" ]]
1972	do
1973	spalte3=$zeile
1974	printf "\| $spalte3 \| \n"
1975	zeile=$(echo "$zeile" \| cut -c61-)
1976	done
1977	fi
1978	printf "#--------------------------------------------------------------#"
1979
1980
1981
1982	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
1983	if [[ $do_trace = true ]]
1984	then
1985	(( i = 0 ))
1986	while (( i < iin ))
1987	do
1988	(( i = i + 1 ))
1989	if (( i == 1 ))
1990	then
1991	printf "\n\n >>> INPUT-file assignments:\n"
1992	fi
1993	printf "\n ${localin[$i]} : ${absnamein[$i]}"
1994	done
1995	(( i = 0 ))
1996	while (( i < iout ))
1997	do
1998	(( i = i + 1 ))
1999	if (( i == 1 ))
2000	then
2001	printf "\n\n >>> OUTPUT-file assignments:\n"
2002	fi
2003	printf "\n ${localout[$i]} : ${pathout[$i]}"
2004	done
2005	(( i = 0 ))
2006	while (( i < iic ))
2007	do
2008	(( i = i + 1 ))
2009	if (( i == 1 ))
2010	then
2011	printf "\n\n >>> INPUT-commands:\n"
2012	fi
2013	printf "\n ${in_command[$i]}"
2014	done
2015	(( i = 0 ))
2016	while (( i < ioc ))
2017	do
2018	(( i = i + 1 ))
2019	if (( i == 1 ))
2020	then
2021	printf "\n\n >>> OUTPUT-commands:\n"
2022	fi
2023	printf "\n ${out_command[$i]}"
2024	done
2025	fi
2026
2027
2028	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2029	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2030	then
2031	antwort=dummy
2032	printf "\n\n"
2033	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2034	do
2035	printf " >>> everything o.k. (y/n) ? "
2036	read antwort
2037	done
2038	if [[ $antwort = n \|\| $antwort = N ]]
2039	then
2040	locat=user_abort; (( iec = 0 )); exit
2041	fi
2042	if [[ $do_batch = true ]]
2043	then
2044	printf " >>> batch-job will be created and submitted"
2045	else
2046	if [[ $local_compile = false ]]
2047	then
2048	printf " >>> MRUN will now continue to execute on this machine"
2049	else
2050	printf " >>> a test compilation will now be carried out on this machine"
2051	fi
2052	fi
2053	fi
2054
2055
2056
2057
2058	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2059	# CHENDE AKTIONEN DURCHGEFUEHRT
2060	if [[ $do_batch = false ]]
2061	then
2062
2063
2064	# TEMPORAEREN KATALOG ERZEUGEN
2065	mkdir -p $TEMPDIR
2066	chmod go+rx $TEMPDIR
2067	tmpcreate=true
2068
2069
2070	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2071	# TEMPORAERES VERZEICHNIS KOPIEREN
2072	if [[ $do_compile = true ]]
2073	then
2074
2075	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2076	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2077	if [[ $localhost = nech ]]
2078	then
2079	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2080	if mkdir -p $TEMPDIR_COMPILE
2081	then
2082	printf "\n *** \"$TEMPDIR_COMPILE\" "
2083	printf "\n is generated as temporary directory for cross compiling\n"
2084	else
2085	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2086	printf "\n needed for cross compilation failed"
2087	locat=compile
2088	exit
2089	fi
2090	else
2091	TEMPDIR_COMPILE=$TEMPDIR
2092	fi
2093
2094
2095	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2096	line=""
2097	grep "%depository_path" $config_file > tmp_mrun
2098	while read line
2099	do
2100	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2101	then
2102	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2103	then
2104	global_depository_path=`echo $line \| cut -d" " -s -f2`
2105	fi
2106	fi
2107	done < tmp_mrun
2108
2109	line=""
2110	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2111	while read line
2112	do
2113	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2114	then
2115	local_depository_path=`echo $line \| cut -d" " -s -f2`
2116	fi
2117	done < tmp_mrun
2118
2119	if [[ "$local_depository_path" = "" ]]
2120	then
2121	if [[ "$global_depository_path" != "" ]]
2122	then
2123	local_depository_path=$global_depository_path
2124	else
2125	printf "\n\n +++ no depository path found in configuration file"
2126	printf "\n for local host \"$localhost\" "
2127	printf "\n please set \"\%depository_path\" in configuration file\n"
2128	locat=config_file; exit
2129	fi
2130	fi
2131	eval local_depository_path=$local_depository_path
2132
2133	basename=`print $mainprog \| cut -f1 -d"."`
2134	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2135	if [[ ! -f $make_depository ]]
2136	then
2137	printf "\n"
2138	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2139	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2140	else
2141	cp $make_depository $TEMPDIR_COMPILE
2142	cd $TEMPDIR_COMPILE
2143	tar -xf $make_depository > /dev/null 2>&1
2144	cd - > /dev/null
2145	fi
2146
2147	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2148
2149	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2150	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2151	# MAKEFILE EINTRAGEN
2152	cd $TEMPDIR_COMPILE
2153	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2154	if [[ "$interface_file" != "" ]]
2155	then
2156	interface_file=`echo $interface_file \| cut -d"." -f1`
2157	mv Makefile Makefile_old
2158	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2159	fi
2160	cd - > /dev/null
2161	else
2162	cp $executable ${TEMPDIR}/a.out
2163	fi
2164
2165
2166	# WECHSEL IN TEMPORAEREN KATALOG
2167	cd $TEMPDIR
2168	printf "\n *** changed to temporary directory: $TEMPDIR"
2169
2170
2171	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2172	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2173	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2174	# ERMITTELN
2175	(( i = 0 ))
2176	while (( i < iout ))
2177	do
2178	(( i = i + 1 ))
2179	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2180	then
2181	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2182	else
2183	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2184	fi
2185	done
2186
2187
2188	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2189	if [[ $do_compile = true ]]
2190	then
2191
2192
2193	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2194	printf "\n\n\n *** compilation starts \n$striche\n"
2195	printf " *** compilation with make using following options:\n"
2196	printf " compilername: $compiler_name\n"
2197	printf " options: $fopts\n"
2198	printf " preprocessor-directives: $cpp_options \n"
2199	printf " linker-options: $lopts \n"
2200	printf " source code files: $source_list \n"
2201
2202	if [[ $localhost = nech ]]
2203	then
2204	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2205	cp $TEMPDIR_COMPILE/a.out .
2206	[[ $? != 0 ]] && compile_error=true
2207	rm -rf $TEMPDIR_COMPILE
2208	else
2209	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2210	fi
2211
2212	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2213	then
2214	printf "\n +++ error occured while compiling or linking"
2215	locat=compile
2216	exit
2217	else
2218	printf "$striche\n *** compilation finished \n"
2219	fi
2220	fi
2221
2222
2223	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2224	if [[ $local_compile = true ]]
2225	then
2226	cd $HOME
2227	rm -rf $TEMPDIR
2228	locat=local_compile; exit
2229	fi
2230
2231
2232	# BEREITSTELLEN DER INPUT-DATEIEN
2233	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2234	(( i = 0 ))
2235	while (( i < iin ))
2236	do
2237	(( i = i + 1 ))
2238	if (( i == 1 ))
2239	then
2240	printf "\n\n *** providing INPUT-files:\n$striche"
2241	fi
2242
2243
2244	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2245	if [[ "${transin[$i]}" = unavailable ]]
2246	then
2247	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2248	then
2249	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2250	printf "\n is not available!"
2251	else
2252	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2253	printf "\n is not available!"
2254	fi
2255	continue
2256	fi
2257
2258	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2259	files_for_pes=false; datentyp=file
2260	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2261	then
2262	files_for_pes=true; datentyp=directory
2263	actionin[$i]=""
2264	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2265	then
2266	actionin[$i]=""
2267	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2268	then
2269	files_for_pes=true; datentyp=directory
2270	actionin[$i]="ar"
2271	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2272	then
2273	actionin[$i]="ar"
2274	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2275	then
2276	files_for_pes=true; datentyp=directory
2277	actionin[$i]="fl"
2278	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2279	then
2280	actionin[$i]="fl"
2281	fi
2282
2283	if [[ $files_for_pes = true ]]
2284	then
2285	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2286	else
2287	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2288	fi
2289
2290	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2291	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2292	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2293	# SERVER ZU HOLEN
2294	if [[ "${actionin[$i]}" = fl ]]
2295	then
2296	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2297	if [[ $files_for_pes = false ]]
2298	then
2299	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2300	then
2301	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2302	got_tmp[$i]=true
2303	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2304	then
2305	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2306	printf "\n *** trying to use backup copy in \"$WORK\" "
2307	cp $WORK/${frelin[$i]} ${localin[$i]}
2308	else
2309	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2310	printf "\n or \"$tmp_data_catalog\" does not exist!"
2311	printf "\n *** trying to get copy from archive"
2312	actionin[$i]=ar
2313	fi
2314	else
2315	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2316	then
2317	mkdir ${localin[$i]}
2318	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2319	got_tmp[$i]=true
2320	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2321	then
2322	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2323	printf "\n *** trying to use backup copy in \"$WORK\" "
2324	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2325	else
2326	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2327	printf "\n or \"$tmp_data_catalog\" does not exist!"
2328	printf "\n *** trying to get copy from archive"
2329	actionin[$i]=ar
2330	fi
2331	fi
2332	fi
2333
2334
2335	# DATEI LIEGT AUF ARCHIV-SERVER
2336	if [[ "${actionin[$i]}" = ar ]]
2337	then
2338
2339	if [[ $files_for_pes = false ]]
2340	then
2341	printf "\n file will be restored from archive-system ($archive_system)!"
2342	else
2343	printf "\n directory will be restored from archive-system ($archive_system)!"
2344	fi
2345
2346	file_restored=false
2347
2348	if [[ $archive_system = asterix ]]
2349	then
2350	do_stagein=true
2351	(( stagein_anz = 0 ))
2352	while [[ $do_stagein = true ]]
2353	do
2354	if [[ $files_for_pes = false ]]
2355	then
2356	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2357	else
2358	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2359	fi
2360	cat STAGEIN_OUTPUT
2361	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2362	then
2363	file_restored=true
2364	do_stagein=false
2365	else
2366	(( stagein_anz = stagein_anz + 1 ))
2367	if (( stagein_anz == 10 ))
2368	then
2369	printf "\n +++ stagein stoped after 10 tries"
2370	locat=stage
2371	exit
2372	fi
2373	printf "\n +++ restoring from archive failed, trying again:"
2374	sleep 900
2375	fi
2376	done
2377	elif [[ $archive_system = DMF ]]
2378	then
2379	if [[ $files_for_pes = false ]]
2380	then
2381	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2382	locat=DMF
2383	exit
2384	else
2385	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2386	cp -r $ARCHIVE/${frelin[$i]} $PWD
2387	file_restored=true
2388	fi
2389	elif [[ $archive_system = tivoli ]]
2390	then
2391	if [[ $files_for_pes = false ]]
2392	then
2393	if [[ $localhost = ibmh ]]
2394	then
2395	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2396	else
2397	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2398	fi
2399	else
2400	(( inode = 0 ))
2401	while (( inode < nodes ))
2402	do
2403	if [[ $localhost = ibmh ]]
2404	then
2405	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2406	else
2407	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2408	fi
2409	(( inode = inode + 1 ))
2410	done
2411	fi
2412	file_restored=true
2413	elif [[ $archive_system = ut ]]
2414	then
2415	if [[ $files_for_pes = false ]]
2416	then
2417	cp $UT/${frelin[$i]} .
2418	else
2419	(( inode = 0 ))
2420	while (( inode < nodes ))
2421	do
2422	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2423	(( inode = inode + 1 ))
2424	done
2425	fi
2426	file_restored=true
2427	else
2428	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2429	locat=rearchive
2430	exit
2431	fi
2432
2433	if [[ $file_restored = true ]]
2434	then
2435
2436	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2437	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2438	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2439	if [[ $files_for_pes = false ]]
2440	then
2441	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2442	else
2443	mkdir $tmp_data_catalog/${frelin[$i]}
2444	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2445	fi
2446	got_tmp[$i]=true
2447
2448	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2449	mv ${frelin[$i]} ${localin[$i]}
2450
2451	fi
2452	fi
2453
2454
2455	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2456	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2457	then
2458
2459	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2460	then
2461
2462	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2463	printf "\n file will be provided for $numprocs processors"
2464	mkdir ${localin[$i]}
2465	ival=$numprocs
2466	(( ii = 0 ))
2467	while (( ii <= ival-1 ))
2468	do
2469	if (( ii < 10 ))
2470	then
2471	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2472	elif (( ii < 100 ))
2473	then
2474	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2475	elif (( ii < 1000 ))
2476	then
2477	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2478	else
2479	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2480	fi
2481	(( ii = ii + 1 ))
2482	done
2483
2484	else
2485
2486	if [[ $files_for_pes = true ]]
2487	then
2488
2489	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2490	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2491	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2492	# PER MOVE UMBENANNT WERDEN
2493	printf "\n providing $numprocs files for the respective processors"
2494	mkdir ${localin[$i]}
2495	cp -r ${absnamein[$i]}/* ${localin[$i]}
2496
2497	else
2498	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2499	cp ${absnamein[$i]} ${localin[$i]}
2500	fi
2501	fi
2502	fi
2503
2504	done
2505	if (( i != 0 ))
2506	then
2507	printf "\n$striche\n *** all INPUT-files provided \n"
2508	fi
2509
2510
2511	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2512	# LESEN VON PALM)
2513	cat > ENVPAR << %%END%%
2514	&envpar run_identifier = '$fname', host = '$localhost',
2515	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2516	maximum_cpu_time_allowed = ${cpumax}.,
2517	revision = '$global_revision' /
2518
2519	%%END%%
2520
2521
2522	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2523	(( i = 0 ))
2524	while (( i < iic ))
2525	do
2526	(( i = i + 1 ))
2527	if (( i == 1 ))
2528	then
2529	printf "\n\n *** execution of INPUT-commands:\n$striche"
2530	fi
2531	printf "\n >>> ${in_command[$i]}"
2532	eval ${in_command[$i]}
2533	if (( i == iic ))
2534	then
2535	printf "\n$striche\n"
2536	fi
2537	done
2538
2539
2540	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2541	cpurest=${cpumax}.
2542
2543
2544	# PROGRAMMSTART
2545	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2546	PATH=$PATH:$TEMPDIR
2547
2548	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2549	then
2550	if [[ "$ENVIRONMENT" = BATCH ]]
2551	then
2552	printf "\n +++ debug is allowed in interactive mode only"
2553	locat=debug
2554	exit
2555	fi
2556	if [[ $localhost = decalpha ]]
2557	then
2558	dxladebug a.out
2559	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2560	then
2561
2562	# SETUP THE IBM MPI ENVIRONMENT
2563	export MP_SHARED_MEMORY=yes
2564	export AIXTHREADS_SCOPE=S
2565	export OMP_NUM_THREADS=$threads_per_task
2566	export AUTHSTATE=files
2567	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2568
2569	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2570	export MP_ADAPTER_USE=shared
2571	export MP_CPU_USE=multiple
2572	export MP_TIMEOUT=1200
2573
2574	unset MP_TASK_AFFINITY
2575
2576	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2577	#(( ii = 1 ))
2578	#while (( ii <= $numprocs ))
2579	#do
2580	# echo $localhost_realname >> hostfile
2581	# (( ii = ii + 1 ))
2582	#done
2583	#export MP_HOSTFILE=hostfile
2584
2585	if [[ "$LOADLBATCH" = yes ]]
2586	then
2587	totalview poe a.out $ROPTS
2588	else
2589	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2590	export TVDSVRLAUNCHCMD=ssh
2591	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2592	fi
2593	else
2594	printf "\n +++ no debug available on \"$localhost\" "
2595	printf "\n or not implemented in mrun so far"
2596	locat=debug
2597	exit
2598	fi
2599	else
2600	if [[ -n $numprocs ]]
2601	then
2602
2603	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2604	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2605	then
2606	# SETUP THE IBM MPI ENVIRONMENT
2607	export MP_SHARED_MEMORY=yes
2608	export AIXTHREAD_SCOPE=S
2609	export OMP_NUM_THREADS=$threads_per_task
2610	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2611	export AUTHSTATE=files
2612	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2613	# export MP_PRINTENV=yes
2614
2615	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2616	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2617	export MP_WAIT_MODE=poll
2618	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2619	# export MP_EAGER_LIMIT=65535
2620
2621	# # TESTWEISE FUER TURBOMPI (JAN 05)
2622	# export MPJ_MTAB=128
2623	# export MPJ_ALLTOALL=1
2624	# export MPJ_ALLTOALLV=1
2625
2626	if [[ "$LOADLBATCH" = yes ]]
2627	then
2628	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2629	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2630	then
2631	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2632	else
2633	poe ./a.out $ROPTS
2634	fi
2635	else
2636	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2637	then
2638	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2639	elif [[ $localhost = ibmy ]]
2640	then
2641	if [[ -f $hostfile ]]
2642	then
2643	cp $hostfile hostfile
2644	else
2645	(( ii = 1 ))
2646	while (( ii <= $numprocs ))
2647	do
2648	echo $localhost_realname >> hostfile
2649	(( ii = ii + 1 ))
2650	done
2651	fi
2652	export MP_HOSTFILE=hostfile
2653	./a.out -procs $tasks_per_node $ROPTS
2654	else
2655	if [[ "$host_file" = "" ]]
2656	then
2657	printf "\n +++ no hostfile given in configuration file"
2658	locat=config_file
2659	exit
2660	else
2661	eval host_file=$host_file
2662	fi
2663	export MP_HOSTFILE=$host_file
2664	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2665	fi
2666	fi
2667	elif [[ $host = nech \|\| $host = neck ]]
2668	then
2669	(( ii = nodes ))
2670	if [[ $ii = 1 ]]
2671	then
2672	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2673	export MPIPROGINF=YES
2674	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2675	echo "*** execution on single node with mpirun"
2676	mpirun -np $numprocs ./a.out $ROPTS
2677	else
2678	(( i = 0 ))
2679	while (( i < ii ))
2680	do
2681	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2682	(( i = i + 1 ))
2683	done
2684
2685	echo "#!/bin/sh" > mpi_exec_shell
2686	echo " " >> mpi_exec_shell
2687	echo "set -u" >> mpi_exec_shell
2688	echo "F_ERRCNT=0" >> mpi_exec_shell
2689	echo "MPIPROGINV=YES" >> mpi_exec_shell
2690	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2691	echo "cpurest=$cpurest" >> mpi_exec_shell
2692	echo "fname=$fname" >> mpi_exec_shell
2693	echo "localhost=$localhost" >> mpi_exec_shell
2694	echo "return_addres=$return_addres" >> mpi_exec_shell
2695	echo "return_username=$return_username" >> mpi_exec_shell
2696	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2697	echo "write_binary=$write_binary" >> mpi_exec_shell
2698	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2699	echo " " >> mpi_exec_shell
2700	echo "export F_ERRCNT" >> mpi_exec_shell
2701	echo "export MPIPROGINV" >> mpi_exec_shell
2702	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2703	echo "export cpurest" >> mpi_exec_shell
2704	echo "export fname" >> mpi_exec_shell
2705	echo "export localhost" >> mpi_exec_shell
2706	echo "export return_addres" >> mpi_exec_shell
2707	echo "export return_username" >> mpi_exec_shell
2708	echo "export tasks_per_node" >> mpi_exec_shell
2709	echo "export write_binary" >> mpi_exec_shell
2710	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2711	echo " " >> mpi_exec_shell
2712	echo "exec ./a.out" >> mpi_exec_shell
2713
2714	chmod u+x mpi_exec_shell
2715	export MPIPROGINF=YES
2716	mpirun -f multinode_config &
2717	wait
2718
2719	fi
2720	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2721	then
2722
2723	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2724	# DOES NOT EXIST
2725	if [[ -f $hostfile ]]
2726	then
2727	cp $hostfile hostfile
2728	else
2729	(( ii = 1 ))
2730	while (( ii <= $numprocs / $threads_per_task ))
2731	do
2732	echo $localhost_realname >> hostfile
2733	(( ii = ii + 1 ))
2734	done
2735	fi
2736	(( ii = $numprocs / $threads_per_task ))
2737	eval zeile=\"`head -n $ii hostfile`\"
2738	printf "\n *** running on: $zeile"
2739	export OMP_NUM_THREADS=$threads_per_task
2740	if [[ $threads_per_task != 1 ]]
2741	then
2742	printf "\n threads per task: $threads_per_task"
2743	fi
2744	if [[ $run_coupled_model = false ]]
2745	then
2746	printf "\n\n"
2747	mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2748	else
2749	(( iii = ii / 2 ))
2750	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2751	printf "\n\n"
2752	mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2753	mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2754	wait
2755	fi
2756
2757	# if [[ $scirocco = true ]]
2758	# then
2759	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2760	# else
2761	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2762	# fi
2763
2764	elif [[ $host = decalpha ]]
2765	then
2766	dmpirun -np $numprocs a.out $ROPTS
2767	elif [[ $host = lctit ]]
2768	then
2769	export runfile=runfile.$kennung
2770
2771	echo "cd $PWD" > $runfile
2772	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2773	echo "export cpurest=$cpurest" >> $runfile
2774	echo "export fname=$fname" >> $runfile
2775	echo "export localhost=$localhost" >> $runfile
2776	echo "export return_addres=$return_addres" >> $runfile
2777	echo "export return_username=$return_username" >> $runfile
2778	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2779	echo "export write_binary=$write_binary" >> $runfile
2780	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2781	echo "./a.out" >> $runfile
2782	chmod u+x $runfile
2783
2784	if [[ "$QUEUE" = interactive ]]
2785	then
2786	mpirun -np $numprocs a.out $ROPTS
2787	else
2788	n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2789	fi
2790
2791	rm $runfile
2792	else
2793	mpprun -n $numprocs a.out $ROPTS
2794	fi
2795	[[ $? != 0 ]] && execution_error=true
2796
2797
2798	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2799	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2800	then
2801	apprentice
2802	fi
2803	else
2804	a.out $ROPTS
2805	fi
2806	fi
2807	if [[ $? != 0 \|\| $execution_error = true ]]
2808	then
2809
2810	# ABBRUCH BEI LAUFZEITFEHLER
2811	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2812	printf "\n +++ runtime error occured"
2813	locat=execution
2814	exit
2815	else
2816	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2817	printf "\n$striche\n *** execution finished \n"
2818	fi
2819
2820
2821
2822	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2823	(( i = 0 ))
2824	while (( i < ioc ))
2825	do
2826	(( i = i + 1 ))
2827	if (( i == 1 ))
2828	then
2829	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2830	fi
2831	printf "\n >>> ${out_command[$i]}"
2832	eval ${out_command[$i]}
2833	if (( i == ioc ))
2834	then
2835	printf "\n$striche\n"
2836	fi
2837	done
2838
2839
2840	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2841	if [[ $do_trace = true ]]
2842	then
2843	printf "\n\n"
2844	ls -al
2845	fi
2846
2847
2848
2849	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2850	(( i = 0 ))
2851	while (( i < iout ))
2852	do
2853	(( i = i + 1 ))
2854	if (( i == 1 ))
2855	then
2856	printf "\n\n *** saving OUTPUT-files:\n$striche"
2857	fi
2858
2859	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2860	files_for_pes=false; filetyp=file
2861	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2862	then
2863	files_for_pes=true; filetyp=directory
2864	actionout[$i]=""
2865	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2866	then
2867	actionout[$i]=""
2868	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2869	then
2870	files_for_pes=true; filetyp=directory
2871	actionout[$i]="ar"
2872	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2873	then
2874	actionout[$i]="ar"
2875	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2876	then
2877	files_for_pes=true; filetyp=directory
2878	actionout[$i]="fl"
2879	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2880	then
2881	actionout[$i]="fl"
2882	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2883	then
2884	files_for_pes=true; filetyp=directory
2885	actionout[$i]="tr"
2886	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2887	then
2888	actionout[$i]="tr"
2889	fi
2890
2891	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2892	then
2893	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2894	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2895	then
2896	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
2897	else
2898
2899
2900	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2901	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2902	# REMOTE-RECHNUNGEN
2903	if [[ "${actionout[$i]}" = tr ]]
2904	then
2905	if [[ $localhost != $fromhost ]]
2906	then
2907	if [[ $files_for_pes = false ]]
2908	then
2909	cps=""
2910	cst=""
2911	else
2912	cps=-c
2913	cst="/"
2914	fi
2915	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2916	then
2917
2918	# TRANSFER IN EIGENSTAENDIGEM JOB
2919	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
2920	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
2921	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
2922	if [[ $files_for_pes = false ]]
2923	then
2924	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
2925	else
2926	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
2927	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
2928	fi
2929
2930	echo "set -x" > transfer_${localout[$i]}
2931	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
2932
2933	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
2934	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
2935	printf "\n or higher cycle\n"
2936	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
2937
2938	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
2939
2940	if [[ $localhost = nech ]]
2941	then
2942	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2943	else
2944	if [[ "$LOGNAME" = b323013 ]]
2945	then
2946	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2947	else
2948	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2949	fi
2950	fi
2951
2952	else
2953
2954	# TRANSFER INNERHALB DIESES JOBS
2955	transfer_failed=false
2956	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
2957	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
2958	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
2959	[[ $? != 0 ]] && transfer_failed=true
2960
2961	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
2962	# LOKALER MASCHINE ANLEGEN
2963	if [[ $transfer_failed = true ]]
2964	then
2965	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
2966	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
2967
2968	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
2969	# ANLEGEN.
2970	eval local_catalog=${pathout[$i]}
2971	if [[ ! -d $local_catalog ]]
2972	then
2973	printf " *** local directory does not exist. Trying to create:\n"
2974	printf " $local_catalog \n"
2975	mkdir -p $local_catalog
2976	fi
2977	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
2978	transfer_problems=true
2979	fi
2980	fi
2981	else
2982
2983	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
2984	actionout[$i]=""
2985	fi
2986	fi
2987
2988
2989	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2990	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2991	# REMOTE-RECHNUNGEN
2992	if [[ "${actionout[$i]}" = tra ]]
2993	then
2994	if [[ $localhost != $fromhost ]]
2995	then
2996	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2997	then
2998
2999	# TRANSFER IN EIGENSTAENDIGEM JOB
3000	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3001	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3002	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3003	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3004
3005	echo "set -x" > transfer_${localout[$i]}
3006	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3007
3008	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3009	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3010	printf "\n or higher cycle\n"
3011	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3012
3013	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3014
3015	if [[ $localhost = nech ]]
3016	then
3017	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3018	else
3019	if [[ $LOGNAME = b323013 ]]
3020	then
3021	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3022	else
3023	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3024	fi
3025	fi
3026
3027	else
3028
3029	# TRANSFER INNERHALB DIESES JOBS
3030	transfer_failed=false
3031	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3032	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3033	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3034	[[ $? != 0 ]] && transfer_failed=true
3035
3036	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3037	# LOKALER MASCHINE ANLEGEN
3038	if [[ $transfer_failed = true ]]
3039	then
3040	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3041	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3042
3043	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3044	# ANLEGEN
3045	eval local_catalog=${pathout[$i]}
3046	if [[ ! -d $local_catalog ]]
3047	then
3048	printf " *** local directory does not exist. Trying to create:\n"
3049	printf " $local_catalog \n"
3050	mkdir -p $local_catalog
3051	fi
3052
3053	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3054	transfer_problems=true
3055	fi
3056	fi
3057	else
3058
3059	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3060	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3061	actionout[$i]=a
3062	fi
3063	fi
3064
3065
3066	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3067	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3068	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3069	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3070	if [[ "${actionout[$i]}" = fl ]]
3071	then
3072	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3073	chmod g+rx $tmp_data_catalog
3074	if [[ $files_for_pes = false ]]
3075	then
3076	printf "\n >>> OUTPUT: ${localout[$i]} to"
3077	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3078	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3079	else
3080	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3081	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3082	mkdir $tmp_data_catalog/${frelout[$i]}
3083	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3084	fi
3085
3086
3087	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3088	if [[ $store_on_archive_system = true ]]
3089	then
3090
3091	if [[ $archive_system = asterix ]]
3092	then
3093	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3094	if [[ $files_for_pes = false ]]
3095	then
3096	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3097	else
3098	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3099	fi
3100	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3101	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3102	echo "then" >> archive_${frelout[$i]}
3103	echo " do_stageout=false" >> archive_${frelout[$i]}
3104	echo "else" >> archive_${frelout[$i]}
3105	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3106	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3107	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3108	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3109	if [[ $files_for_pes = false ]]
3110	then
3111	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3112	else
3113	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3114	fi
3115	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3116	echo "fi" >> archive_${frelout[$i]}
3117	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3118	elif [[ $archive_system = DMF ]]
3119	then
3120	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3121	if [[ $files_for_pes = false ]]
3122	then
3123	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3124	locat=DMF
3125	exit
3126	else
3127	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3128	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3129	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3130	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3131	fi
3132	elif [[ $archive_system = tivoli ]]
3133	then
3134	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3135	if [[ $files_for_pes = false ]]
3136	then
3137	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3138	echo "set -x" >> archive_${frelout[$i]}
3139	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3140	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3141	else
3142
3143	echo "set -x" >> archive_${frelout[$i]}
3144	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3145	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3146	cd $tmp_data_catalog
3147	all_files=`ls -1 ${frelout[$i]}/*`
3148	cd - > /dev/null
3149	(( inode = 0 ))
3150	(( tp1 = tasks_per_node + 1 ))
3151	while (( inode < nodes ))
3152	do
3153	# echo "*** all_files = \"$all_files\" "
3154	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3155	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3156	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3157	# echo "*** files = \"$files\" "
3158	# echo "*** all_files = \"$all_files\" "
3159	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3160	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3161	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3162	(( inode = inode + 1 ))
3163	done
3164	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3165	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3166	fi
3167	elif [[ $archive_system = ut ]]
3168	then
3169	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3170	if [[ $files_for_pes = false ]]
3171	then
3172	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3173	echo "set -x" >> archive_${frelout[$i]}
3174	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3175	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3176	else
3177
3178	echo "set -x" >> archive_${frelout[$i]}
3179	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3180	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3181	cd $tmp_data_catalog
3182	all_files=`ls -1 ${frelout[$i]}/*`
3183	cd - > /dev/null
3184	(( inode = 0 ))
3185	(( tp1 = tasks_per_node + 1 ))
3186	while (( inode < nodes ))
3187	do
3188	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3189	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3190	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3191	(( inode = inode + 1 ))
3192	done
3193	fi
3194	elif [[ $archive_system = none ]]
3195	then
3196	printf " +++ archiving on $localhost not available!\n"
3197	fi
3198
3199	if [[ $archive_system != none ]]
3200	then
3201	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3202	then
3203	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3204	subjob -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3205	elif [[ $localhost = nech ]]
3206	then
3207	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3208	fi
3209	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3210	fi
3211	else
3212	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3213	fi
3214
3215
3216	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3217	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3218	if [[ $files_for_pes = false ]]
3219	then
3220	cat /dev/null > ${pathout[$i]}
3221	else
3222	mkdir -p ${pathout[$i]}
3223	fi
3224
3225	fi
3226
3227
3228	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3229	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3230	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3231	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3232	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3233	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3234	if [[ "${actionout[$i]}" = ar ]]
3235	then
3236	if [[ $files_for_pes = false ]]
3237	then
3238	printf "\n >>> OUTPUT: ${localout[$i]} to"
3239	printf "\n ${pathout[$i]}"
3240	printf "\n File will be copied to archive-system ($archive_system) !\n"
3241	else
3242	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3243	printf "\n ${pathout[$i]}"
3244	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3245	fi
3246	mv ${localout[$i]} ${frelout[$i]}
3247
3248	file_saved=false
3249
3250	if [[ $archive_system = asterix ]]
3251	then
3252	do_stageout=true
3253	(( stageout_anz = 0 ))
3254	while [[ $do_stageout = true ]]
3255	do
3256	if [[ $files_for_pes = false ]]
3257	then
3258	stageout ${frelout[$i]} > STAGE_OUTPUT
3259	else
3260	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3261	fi
3262	cat STAGE_OUTPUT
3263	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3264	then
3265	file_saved=true
3266	do_stageout=false
3267	else
3268	if [[ $files_for_pes = false ]]
3269	then
3270	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3271	else
3272	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3273	fi
3274	(( stageout_anz = stageout_anz + 1 ))
3275	if (( stageout_anz == 10 ))
3276	then
3277	printf "\n +++ stoped after 10 unsuccessful tries!"
3278	archive_save=false
3279	do_stageout=false
3280	else
3281	printf "\n *** new try to store on archive after 15 min:"
3282	sleep 900
3283	fi
3284	fi
3285	done
3286	elif [[ $archive_system = DMF ]]
3287	then
3288	if [[ $files_for_pes = false ]]
3289	then
3290	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3291	locat=DMF
3292	exit
3293	else
3294	rm -rf $ARCHIVE/${frelout[$i]}
3295	cp -r ${frelout[$i]} $ARCHIVE
3296	fi
3297	file_saved=true
3298	elif [[ $archive_system = tivoli ]]
3299	then
3300	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3301	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3302	# GELEGT WERDEN
3303	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3304	chmod g+rx $tmp_data_catalog
3305	if [[ $files_for_pes = false ]]
3306	then
3307	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3308	else
3309	mkdir $tmp_data_catalog/${frelout[$i]}
3310	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3311	fi
3312
3313	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3314	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3315	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3316	if [[ $files_for_pes = false ]]
3317	then
3318	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3319	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3320	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3321	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3322	else
3323	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3324	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3325	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3326	fi
3327
3328	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3329	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3330	file_saved=true
3331
3332	elif [[ $archive_system = ut ]]
3333	then
3334	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3335	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3336	# GELEGT WERDEN
3337	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3338	chmod g+rx $tmp_data_catalog
3339	if [[ $files_for_pes = false ]]
3340	then
3341	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3342	else
3343	mkdir $tmp_data_catalog/${frelout[$i]}
3344	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3345	fi
3346
3347	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3348	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3349	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3350	if [[ $files_for_pes = false ]]
3351	then
3352	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3353	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3354	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3355	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3356	else
3357	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3358	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3359	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3360	fi
3361
3362	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3363	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3364	file_saved=true
3365
3366	else
3367	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3368	archive_save=false
3369	fi
3370	if [[ $file_saved = true ]]
3371	then
3372	if [[ $files_for_pes = false ]]
3373	then
3374	cat /dev/null > ${pathout[$i]}
3375	else
3376	mkdir -p ${pathout[$i]}
3377	fi
3378	fi
3379	fi
3380
3381	# APPEND AUF LOKALER MASCHINE
3382	if [[ "${actionout[$i]}" = "a" ]]
3383	then
3384	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3385	cat ${localout[$i]} >> ${pathout[$i]}
3386	fi
3387
3388	# KOPIEREN AUF LOKALER MASCHINE
3389	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3390	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3391	then
3392
3393	# KOPIEREN AUF EINPROZESSORMASCHINE
3394	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3395	then
3396	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3397	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3398	else
3399	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3400	cp ${localout[$i]} ${pathout[$i]}
3401	fi
3402
3403	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3404	then
3405
3406	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3407	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3408	# WIRD DANN KOPIERT
3409	# PER MOVE UMBENANNT WERDEN
3410	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3411	cp -r ${localout[$i]} ${pathout[$i]}
3412
3413	fi
3414	fi
3415	done
3416	if (( i != 0 ))
3417	then
3418	if [[ $transfer_problems = true ]]
3419	then
3420	printf "\n$striche\n *** OUTPUT-files saved"
3421	printf "\n +++ WARNING: some data transfers failed! \n"
3422	else
3423	printf "\n$striche\n *** all OUTPUT-files saved \n"
3424	fi
3425	fi
3426
3427
3428	# EVENTUELL FOLGEJOB STARTEN
3429	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3430	if [[ -f CONTINUE_RUN ]]
3431	then
3432
3433	if [[ $archive_save = true ]]
3434	then
3435
3436	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3437	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3438	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3439	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3440	# HANDEN
3441	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3442	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3443	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3444	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3445	then
3446	mc=`echo $mc \| sed 's/#/f/g'`
3447	fi
3448
3449
3450	# JOB STARTEN
3451	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3452	echo " $mc"
3453	printf "\n$striche\n"
3454	if [[ $localhost != $fromhost ]]
3455	then
3456
3457	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3458	then
3459	echo "*** ssh will be used to initiate restart-runs!"
3460	echo " return_addres=\"$return_addres\" "
3461	echo " return_username=\"$return_username\" "
3462	if [[ $return_addres = 172.20.25.41 ]]
3463	then
3464	# WORKAROUND AUF SCIROCCO AM TIT
3465	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3466	else
3467	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3468	fi
3469	else
3470	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3471	locat=restart; exit
3472	fi
3473
3474	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3475	# DER AKTUELLE JOB ENDET
3476	sleep 30
3477
3478	else
3479
3480	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3481	# RUFEN WERDEN, AUSSER AUF lcfimm
3482	cd $LOCAL_PWD
3483	if [[ $localhost = lcfimm ]]
3484	then
3485	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3486	else
3487	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3488	fi
3489	cd - > /dev/null
3490	fi
3491	printf "\n$striche\n *** restart-run initiated \n"
3492
3493
3494	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3495	# GEHOLT WORDEN SIND, LOESCHEN
3496	(( i = 0 ))
3497	while (( i < iin ))
3498	do
3499	(( i = i + 1 ))
3500	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3501	then
3502	rm -r $tmp_data_catalog/${frelin[$i]}
3503	fi
3504	done
3505
3506	else
3507
3508	printf "\n +++ no restart-run possible, since errors occured"
3509	printf "\n during the archive process"
3510	fi
3511
3512	fi
3513
3514
3515
3516	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3517	if [[ "$email_notification" != "" ]]
3518	then
3519
3520	if [[ $localhost != $fromhost ]]
3521	then
3522	if [[ -f CONTINUE_RUN ]]
3523	then
3524	echo "PALM restart run necessary" > email_text
3525	echo "description header of actual run:" >> email_text
3526	cat CONTINUE_RUN >> email_text
3527	echo "mrun-command to restart:" >> email_text
3528	echo "$mc" >> email_text
3529	else
3530	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3531	fi
3532	mail $email_notification < email_text
3533	printf "\n *** email notification sent to \"$email_notification\" "
3534	fi
3535	fi
3536
3537
3538
3539	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3540	cd $HOME
3541	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3542
3543	else
3544
3545
3546	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3547	# CHENDE AKTIONEN DURCHGEFUEHRT
3548
3549	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3550	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3551	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3552	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3553	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3554	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3555	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3556	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3557	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3558	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3559	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3560	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3561	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3562	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3563	if [[ $use_openmp = true ]]
3564	then
3565	mrun_com=${mrun_com}" -O"
3566	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3567	else
3568	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3569	fi
3570	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3571	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3572	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3573	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3574	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3575	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3576	if [[ $do_remote = true ]]
3577	then
3578	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3579	fi
3580
3581
3582	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3583	jobfile=jobfile.$RANDOM
3584
3585
3586	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3587	echo "mkdir $TEMPDIR" >> $jobfile
3588	echo "cd $TEMPDIR" >> $jobfile
3589
3590
3591	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3592	if [[ $do_trace = true ]]
3593	then
3594	echo "set -x" >> $jobfile
3595	else
3596	echo "set +vx" >> $jobfile
3597	fi
3598
3599
3600	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3601	# SOWIE GEGEBENENFALLS DES MAKEFILES
3602	if [[ $do_compile = true ]]
3603	then
3604
3605	source_catalog=SOURCES_FOR_RUN_$fname
3606
3607	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3608	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3609	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3610	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3611	echo "export SOURCES_COMPLETE=true" >> $jobfile
3612	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3613
3614	for filename in $source_list
3615	do
3616	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3617	echo "cat > $filename << \"%END%\"" >> $jobfile
3618	cat $source_catalog/$filename >> $jobfile
3619	echo " " >> $jobfile
3620	echo "%END%" >> $jobfile
3621	echo " " >> $jobfile
3622	done
3623
3624	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3625	echo "cat > Makefile << \"%END%\"" >> $jobfile
3626	cat $source_catalog/Makefile >> $jobfile
3627	echo " " >> $jobfile
3628	echo "%END%" >> $jobfile
3629	echo " " >> $jobfile
3630
3631	echo "cd - > /dev/null" >> $jobfile
3632
3633	fi
3634
3635
3636	# ABSPEICHERN DER KONFIGURATIONSDATEI
3637	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3638	echo "cat > $config_file << \"%END%\"" >> $jobfile
3639	cat $config_file >> $jobfile
3640	echo "%END%" >> $jobfile
3641	echo " " >> $jobfile
3642
3643
3644	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3645	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3646	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3647	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3648	echo "%END%" >> $jobfile
3649	if [[ $host = lctit ]]
3650	then
3651	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3652	echo "mv mrun_new $mrun_script_name" >> $jobfile
3653	fi
3654	echo "chmod u+x $mrun_script_name" >> $jobfile
3655	echo "execute_mrun=true" >> $jobfile
3656	echo " " >> $jobfile
3657
3658	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3659	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3660	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3661	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3662	if [[ $do_remote = true ]]
3663	then
3664	(( i = 0 ))
3665	while (( i < iin ))
3666	do
3667	(( i = i + 1 ))
3668	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3669	if [[ "${transin[$i]}" = job ]]
3670	then
3671	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3672	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3673	echo " " >> $jobfile
3674	echo "%END%" >> $jobfile
3675	else
3676	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3677	fi
3678
3679	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3680	echo "if [[ \$? = 1 ]]" >> $jobfile
3681	echo "then" >> $jobfile
3682	echo " echo \" \" " >> $jobfile
3683	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3684	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3685	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3686	echo " execute_mrun=false" >> $jobfile
3687	echo "fi" >> $jobfile
3688	done
3689	fi
3690
3691	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3692	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3693	echo "LOCAL_PWD=$working_directory" >> $jobfile
3694	echo "export LOCAL_PWD" >> $jobfile
3695
3696	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3697	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3698	echo "export LOCAL_MRUN_PATH" >> $jobfile
3699
3700	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3701	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3702	then
3703	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3704	fi
3705
3706	# MRUN AUF ZIELRECHNER AUFRUFEN
3707	echo "set -x" >> $jobfile
3708	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3709
3710	echo 'ls -al; echo `pwd`' >> $jobfile
3711	echo "cd \$HOME" >> $jobfile
3712	echo "rm -rf $TEMPDIR" >> $jobfile
3713
3714
3715
3716
3717	# JOB PER SUBJOB STARTEN
3718	if [[ $silent = false ]]
3719	then
3720	printf "\n "
3721	else
3722	printf "\n\n"
3723	fi
3724
3725	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v $jobfile
3726	rm -rf $jobfile
3727
3728
3729	fi # ENDE REMOTE-TEIL
3730
3731
3732
3733	# ENDE DER PROZEDUR

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