Home

Context Navigation

source: palm/trunk/SCRIPTS/mrun @ 104

Last change on this file since 104 was 102, checked in by raasch, 17 years ago
preliminary version for coupled runs
Property svn:keywords set to `Rev`
File size: 138.0 KB

Line
1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126
127
128
129
130	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
131
132	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
133	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
134	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
135
136	AddFilenames=""
137	additional_conditions=""
138	add_source_path=""
139	afname=""
140	archive_save=true
141	archive_system=none
142	compiler_name=""
143	cond1=""
144	cond2=""
145	config_file=.mrun.config
146	cpp_opts=""
147	cpp_options=""
148	cpumax=0
149	cpurest=0
150	delete_temporary_catalog=true
151	do_batch=false
152	do_compile=true
153	do_remote=false
154	do_stagein=true
155	do_stageout=true
156	do_trace=false
157	email_notification=""
158	exclude=""
159	executable=""
160	execution_error=false
161	fimm=false
162	fname=test
163	fromhost=""
164	global_revision=""
165	host=""
166	host_file=""
167	hp=""
168	ignore_archive_error=false
169	input_list=""
170	interpreted_config_file=""
171	job_on_file=""
172	keep_data_from_previous_run=false
173	localhost_realname=$(hostname)
174	local_compile=false
175	locat=normal
176	mainprog=""
177	makefile=""
178	mc=$0
179	while [[ $(echo $mc \| grep -c "/") != 0 ]]
180	do
181	mc=`echo $mc \| cut -f2- -d"/"`
182	done
183	module_files=""
184	mrun_script_name=$mc
185	netcdf_inc=""
186	netcdf_lib=""
187	netcdf_support=false
188	node_usage=default
189	numprocs=""
190	OOPT=""
191	openmp=false
192	output_list=""
193	package_list=""
194	punkte="..........................................................."
195	queue=none
196	read_from_config=""
197	restart_run=false
198	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
199	if [[ $return_addres = 130.75.105.158 ]]
200	then
201	return_addres=172.20.25.41
202	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
203	fi
204	# if [[ $return_addres = 210.117.65.1 ]]
205	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
206	# then
207	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
208	# fi
209	return_password=""
210	return_username=$LOGNAME
211	remotecall=false
212	remote_username=""
213	run_coupled_model=false
214	run_mode=""
215	scirocco=false
216	store_on_archive_system=true
217	striche=" ----------------------------------------------------------------------------"
218	silent=false
219	source_list=""
220	source_path=SOURCE
221	tasks_per_node=""
222	threads_per_task=1
223	tmpcreate=false
224	tmp_data_catalog=""
225	transfer_problems=false
226	usern=$LOGNAME
227	working_directory=`pwd`
228	TOPT=""
229	XOPT=""
230	zeit=$( date \| cut -c 12-19 )
231
232	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
233	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
234
235	typeset -R30 calltime
236	typeset -L20 spalte1
237	typeset -L40 spalte2
238	typeset -L60 spalte3
239	typeset -L35 string1=`date`
240	typeset -L12 string2=$usern
241	typeset -L12 string3=$localhost_realname
242	typeset -L12 string4
243	typeset -L12 string5
244	typeset -L30 version="MRUN 2.0 Rev$Rev: 102 $"
245
246
247
248	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
249	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
250
251	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
252	# EXPORTIERT WERDEN
253	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
254	export input_list memory numprocs output_list queue run_mode
255
256
257
258	# FEHLERBEHANDLUNG
259	# BEI EXIT:
260	trap 'rm -rf $working_directory/tmp_mrun
261	if [[ $locat != localhost ]]
262	then
263	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
264	# then
265	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
266	#MRUN-calls on $localhost
267	#
268	#date and time user localhost remotehost termination mrun-command
269	#--------------------------------------------------------------------------------------------------------------------
270	#%STATEND%
271	# chmod 666 ${mrun_path}/statistik/mrun_statistik
272	# fi
273	#
274	# # EINTRAG IN DIE STATISTIK-DATEI
275	# string4=$host
276	# string5=$locat
277	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
278	# then
279	# if [[ $do_batch = true ]]
280	# then
281	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
282	# else
283	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
284	# fi
285	# fi
286	echo " " > /dev/null
287	fi
288
289	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
290	then
291
292	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
293	(( i = 0 ))
294	while (( i < iec ))
295	do
296	(( i = i + 1 ))
297	printf "\n *** Execution of ERROR-command:\n"
298	printf " >>> ${err_command[$i]}\n"
299	eval ${err_command[$i]}
300	done
301	if [[ -n $interpreted_config_file ]] then
302	rm -rf $interpreted_config_file
303	fi
304	if [[ -n .mrun_environment ]] then
305	rm -rf .mrun_environment
306	fi
307	if [[ $tmpcreate = true ]]
308	then
309	printf "\n *** Contents of \"$TEMPDIR\":\n"
310	ls -al; cd
311	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
312	fi
313	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
314	then
315	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
316	fi
317	printf "\n\n+++ MRUN killed \n\n"
318	elif [[ $locat != control_c ]]
319	then
320	printf "\n\n --> all actions finished\n\n"
321	printf " Bye, bye $usern !!\n\n"
322	fi' exit
323
324
325	# BEI TERMINAL-BREAK:
326	trap 'rm -rf $working_directory/tmp_mrun
327	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
328	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
329	then
330	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
331	fi
332	printf "\n+++ MRUN killed by \"^C\" \n\n"
333	locat=control_c
334	exit
335	' 2
336
337
338	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
339	# BEEN SET
340	if [[ "$PALM_BIN" = "" ]]
341	then
342	printf "\n +++ environment variable PALM_BIN has not been set"
343	printf "\n please set it to the directory where the PALM scripts are located"
344	locat=palm_bin; exit
345	fi
346
347
348
349	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
350	# FUER FOLGEJOBS BENOETIGT WIRD
351	while getopts :a:AbBc:Cd:D:FG:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
352	do
353	case $option in
354	(a) afname=$OPTARG;;
355	(A) store_on_archive_system=false; mc="$mc -A";;
356	(b) do_batch=true; mc="$mc -b";;
357	(B) delete_temporary_catalog=false; mc="$mc -B";;
358	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
359	(C) restart_run=true; mc="$mc -C";;
360	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
361	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
362	(F) job_on_file="-D"; mc="$mc -F";;
363	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
364	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
365	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
366	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
367	(I) ignore_archive_error=true; mc="$mc -I";;
368	(k) keep_data_from_previous_run=true; mc="$mc -k";;
369	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
370	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
371	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
372	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
373	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
374	(O) use_openmp=true; mc="$mc -O";;
375	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
376	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
377	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
378	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
379	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
380	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
381	(S) read_from_config=false; mc="$mc -S";;
382	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
383	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
384	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
385	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
386	(v) silent=true; mc="$mc -v";;
387	(x) do_trace=true;set -x; mc="$mc -x";;
388	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
389	(Y) run_coupled_model=true; mc="$mc -Y";;
390	(\?) printf "\n +++ unknown option $OPTARG \n"
391	printf "\n --> type \"$0 ?\" for available options \n"
392	locat=parameter;exit;;
393	esac
394	done
395
396
397	# EVTL. POSITIONSPARAMETER EINLESEN
398	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
399	shift OPTIND-1
400
401
402	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
403	if [[ "$1" = "?" ]]
404	then
405	(printf "\n *** mrun can be called as follows:\n"
406	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
407	printf "\n Description of available options:\n"
408	printf "\n Option Description Default-Value"
409	printf "\n -a base name of input files equiv. -d"
410	printf "\n -A no archiving when using file-attribute fl"
411	printf "\n -b batch-job on local machine ---"
412	printf "\n -B do not delete temporary directory at end ---"
413	printf "\n -c configuration file .mrun.config"
414	printf "\n -d base name of files attached to program test"
415	printf "\n -D preprocessor(cpp)-directives \"\" "
416	printf "\n -F create remote job file only ---"
417	printf "\n -h execution host $localhost_realname"
418	printf "\n -i INPUT control list \"\" "
419	printf "\n -I archiving errors of previous batch-jobs"
420	printf "\n will be ignored"
421	printf "\n -k keep data from previous run"
422	printf "\n -K additional conditions for controling"
423	printf "\n usage of conditional code and"
424	printf "\n env-variables in configuration file \"\" "
425	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
426	printf "\n -M Makefile name Makefile"
427	printf "\n -n node usage (shared/not_shared) depending on -h"
428	printf "\n -o OUTPUT control list \"\" "
429	printf "\n -O use OpenMP ---"
430	printf "\n -p software package list \"\" "
431	printf "\n -q queue \"$queue\" "
432	printf "\n -r run control list (combines -i -o) \"\" "
433	printf "\n -s filenames of routines to be compiled \"\" "
434	printf "\n must end with .f, .f90, .F, or .c !"
435	printf "\n use \"..\" for more than one file and wildcards"
436	printf "\n -s TEST compiles all files with w-permit"
437	printf "\n -S config file interpreted by shellscript ---"
438	printf "\n -t allowed cpu-time in seconds (batch) 0"
439	printf "\n -T tasks per node depending on -h"
440	printf "\n -u username on remote machine \"\" "
441	printf "\n -v no prompt for confirmation ---"
442	printf "\n -x tracing of mrun for debug purposes ---"
443	printf "\n -X # of processors (on parallel machines) 1"
444	printf "\n -Y run coupled model ---"
445	printf "\n "
446	printf "\n Possible values of positional parameter <modus>:"
447	printf "\n \"?\" - this outline \n\n") \| more
448	exit
449	elif [[ "$1" != "" ]]
450	then
451	printf "\n +++ positional parameter $1 unknown \n"
452	locat=parameter; exit
453	fi
454
455
456
457	# KURZE STARTMELDUNG
458	printf "\n*** $version "
459	printf "\n will be executed. Please wait ..."
460
461
462
463	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
464	if [[ ! -f $config_file ]]
465	then
466	printf "\n\n +++ configuration file: "
467	printf "\n $config_file"
468	printf "\n does not exist"
469	locat=connect; exit
470	fi
471
472
473	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
474	line=""
475	grep "%host_identifier" $config_file > tmp_mrun
476	while read line
477	do
478	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
479	then
480	HOSTNAME=`echo $line \| cut -d" " -s -f2`
481	host_identifier=`echo $line \| cut -d" " -s -f3`
482	if [[ $localhost_realname = $HOSTNAME ]]
483	then
484	localhost=$host_identifier
485	break
486	fi
487	fi
488	done < tmp_mrun
489
490	if [[ "$localhost" = "" ]]
491	then
492	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
493	printf "\n for local host \"$localhost_realname\"."
494	printf "\n Please add line"
495	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
496	printf "\n to the configuration file."
497	locat=localhost; exit
498	fi
499
500
501
502	# HOSTSPEZIFISCHE VARIABLEN SETZEN
503	case $localhost_realname in
504	(breg-en0\|berni-en0) archive_system=tivoli;;
505	(cs*) archive_system=ut;;
506	(fimm.bccs.uib.no) fimm=true;;
507	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
508	(hreg-en0\|hanni-en0) archive_system=tivoli;;
509	(scirocco) scirocco=true;;
510	esac
511
512
513
514	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
515	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
516	[[ "$afname" = "" ]] && afname=$fname
517
518
519	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
520	if [[ "$run_mode" != "" ]]
521	then
522	input_list="$input_list $run_mode"
523	output_list="$output_list $run_mode"
524	fi
525
526
527	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
528	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
529	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
530	# STARTET)
531	if [[ "$fromhost" = "" ]]
532	then
533	fromhost=$localhost
534	fi
535
536
537	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
538	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
539	then
540	source_list=TEST
541	local_compile=true
542	host=$localhost
543	fi
544
545
546	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
547	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
548	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
549	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
550	if [[ -n $host && "$host" != $localhost ]]
551	then
552	do_batch=true
553	do_remote=true
554	case $host in
555	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
556	(*) printf "\n"
557	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
558	printf "\n is not available"
559	locat=nqs; (( iec = 0 )); exit;;
560	esac
561	else
562	host=$localhost
563	fi
564
565
566	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
567	if [[ -n $additional_conditions ]]
568	then
569	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
570	cond1=`echo $additional_conditions \| cut -d" " -f1`
571	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
572	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
573	if [[ -n $dummy ]]
574	then
575	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
576	locat=options; exit
577	fi
578	fi
579
580
581	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
582	# ARCHIVIERUNG FEHLGESCHLAGEN IST
583	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
584	then
585	if [[ $ignore_archive_error = false ]]
586	then
587	printf "\n +++ data archiving of previous run failed"
588	printf "\n see directory \~/job_queue on remote machine"
589	locat=archive; exit
590	else
591	printf "\n +++ warning: data archiving in a previous run failed"
592	printf "\n MRUN continues, trying to get backup copy"
593	fi
594	fi
595
596
597
598	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
599	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
600	if [[ "$read_from_config" = false ]]
601	then
602
603	[[ $silent = false ]] && printf "\n Reading the configuration file... "
604	while read zeile
605	do
606	[[ $silent = false ]] && printf "."
607
608
609	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
610	# ERSETZEN
611	eval zeile=\"$zeile\"
612
613
614	# INTERPRETATION DER ZEILE
615	if [[ "$(echo $zeile)" = "" ]]
616	then
617	# LEERZEILE, KEINE AKTION
618	continue
619
620	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
621	then
622
623	# ZEILE IST KOMMENTARZEILE
624	true
625
626	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
627	then
628
629	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
630	zeile=$(echo $zeile \| cut -c2-)
631	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
632	var=`echo $zeile \| cut -d" " -f1`
633	value=`echo $zeile \| cut -d" " -s -f2`
634	for_host=`echo $zeile \| cut -d" " -s -f3`
635	for_cond1=`echo $zeile \| cut -d" " -s -f4`
636	for_cond2=`echo $zeile \| cut -d" " -s -f5`
637
638	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
639	then
640
641	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
642	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
643	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
644
645
646	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
647	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
648	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
649	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
650	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
651	# KONFIGURATIONSDATEI
652	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
653	then
654	eval $var=\$value
655
656	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
657	if [[ $do_trace = true ]]
658	then
659	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
660	fi
661	fi
662
663	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
664	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
665	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
666	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
667	if [[ $var = host ]]
668	then
669	if [[ -n $host && "$host" != $localhost ]]
670	then
671	do_batch=true
672	do_remote=true
673	case $host in
674	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
675	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
676	printf "\n is not available"
677	locat=nqs; exit;;
678	esac
679	else
680	host=$localhost
681	fi
682	fi
683
684	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
685	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
686	# DEN PROGRAMMEN BENOETIGT WERDEN
687	export $var
688	fi
689
690
691
692
693	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
694	then
695
696	# ZEILE DEFINIERT ERROR-KOMMANDO
697	(( iec = iec + 1 ))
698	zeile=$(echo $zeile \| cut -c4-)
699	err_command[$iec]="$zeile"
700
701	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
702	then
703
704	# ZEILE DEFINIERT INPUT-KOMMANDO
705	(( iic = iic + 1 ))
706	zeile=$(echo $zeile \| cut -c4-)
707	in_command[$iic]="$zeile"
708
709	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
710	then
711
712	# ZEILE DEFINIERT OUTPUT-KOMMANDO
713	(( ioc = ioc + 1 ))
714	zeile=$(echo $zeile \| cut -c4-)
715	out_command[$ioc]="$zeile"
716
717	else
718
719	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
720	# s2a: in/out - Feld
721	# s2b: loc - Feld (optional)
722	# s2c: tr/ar - Feld (optional)
723	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
724	s1=`echo $zeile \| cut -d" " -f1`
725	s2=`echo $zeile \| cut -d" " -s -f2`
726	s2a=$(echo $s2 \| cut -d":" -f1)
727	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
728	then
729	s2b=""
730	s2c=""
731	else
732	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
733	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
734	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
735	fi
736	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
737	s3=`echo $zeile \| cut -d" " -f3`
738	s4=`echo $zeile \| cut -d" " -s -f4`
739	s5=`echo $zeile \| cut -d" " -s -f5`
740	s6=`echo $zeile \| cut -d" " -s -f6`
741
742
743	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
744	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
745	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
746	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
747	# HANDEN SEIN MUSS (D.H. s2b = loc)
748	IFSALT="$IFS"; IFS="$IFS:"
749	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
750	then
751	found=false
752	for actual in $input_list
753	do
754	for formal in $s3
755	do
756	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
757	done
758	done
759	if [[ $found = true ]]
760	then
761	(( iin = iin + 1 ))
762	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
763	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
764	extin[$iin]=$s6
765	fi
766	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
767	then
768	found=false
769	for actual in $output_list
770	do
771	for formal in $s3
772	do
773	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
774	done
775	done
776	if [[ $found = true ]]
777	then
778	(( iout = iout + 1 ))
779	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
780	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
781	fi
782	elif [[ "$s2a" != in && "$s2a" != out ]]
783	then
784	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
785	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
786	locat=connect; exit
787	fi
788	IFS="$IFSALT"
789	fi
790	done < $config_file
791
792	else
793
794
795	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
796	[[ $silent = false ]] && printf "..."
797	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
798	export interpreted_config_file=.icf.$RANDOM
799
800
801
802	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
803	# VERFUEGUNG STELLEN
804	cat > .mrun_environment << %%END%%
805	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
806	config_file = '$config_file', do_remote = '$do_remote',
807	do_trace = '$do_trace', host = '$host',
808	input_list = '$input_list', icf = '$interpreted_config_file',
809	localhost = '$localhost', output_list = '$output_list' /
810
811	%%END%%
812
813	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
814	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
815	mrun_memory=$memory
816	mrun_cpumax=$cpumax
817	mrun_numprocs=$numprocs
818
819	if [[ $localhost_realname = "gate" ]]
820	then
821	interpret_config_gate.x
822	else
823	interpret_config.x
824	fi
825	rm .mrun_environment
826
827
828	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
829	chmod u+x $interpreted_config_file
830	export PATH=$PATH:.
831	. $interpreted_config_file
832	rm $interpreted_config_file
833
834
835	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
836	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
837	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
838	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
839
840	fi
841
842
843	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
844	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
845	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
846	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
847	if [[ "$SOURCES_COMPLETE" = "" ]]
848	then
849
850	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
851	# VEREINBART WURDE
852	source_path=""
853	line=""
854	grep "%source_path" $config_file > tmp_mrun
855	while read line
856	do
857	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
858	then
859	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
860	then
861	global_source_path=`echo $line \| cut -d" " -f2`
862	fi
863	fi
864	done < tmp_mrun
865
866	line=""
867	found=false
868	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
869	while read line
870	do
871	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
872	then
873	if [[ $found = true ]]
874	then
875	printf "\n\n +++ more than one source path found in configuration file"
876	printf "\n for local host \"$localhost\" "
877	locat=source_path; exit
878	fi
879	source_path=`echo $line \| cut -d" " -f2`
880	found=true
881	fi
882	done < tmp_mrun
883	rm tmp_mrun
884
885	if [[ "$source_path" = "" ]]
886	then
887	if [[ "$global_source_path" != "" ]]
888	then
889	source_path=$global_source_path
890	else
891	printf "\n\n +++ no source path found in configuration file"
892	printf "\n for local host \"$localhost\" "
893	locat=source_path; exit
894	fi
895	fi
896	eval source_path=$source_path
897
898	if [[ ! -d $source_path ]]
899	then
900	printf "\n\n +++ source path \"$source_path\" on local host"
901	printf "\n \"$localhost\" does not exist"
902	locat=source_path; exit
903	fi
904
905	fi
906
907
908	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
909	# DURCH OPTION -G MITGETEILT)
910	if [[ "$global_revision" = "" ]]
911	then
912	global_revision=`svnversion $source_path 2>/dev/null`
913	global_revision="Rev: $global_revision"
914	fi
915
916
917	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
918	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
919	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
920	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
921	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
922	if [[ -n $host && "$host" != $localhost ]]
923	then
924	do_batch=true
925	do_remote=true
926	case $host in
927	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
928	(*) printf "\n"
929	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
930	printf "\n is not available"
931	locat=nqs; (( iec = 0 )); exit;;
932	esac
933	else
934	host=$localhost
935	fi
936
937
938	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
939	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
940	then
941
942	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
943	if [[ ! -n $numprocs ]]
944	then
945	printf "\n"
946	printf "\n +++ option \"-K parallel\" requires additional specification"
947	printf "\n of the number of processors to be used by"
948	printf "\n mrun-option \"-X\" or by environment-variable"
949	printf "\n \"numprocs\" in the configuration file"
950	locat=numprocs; (( iec = 0 )); exit
951	fi
952
953	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
954	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
955	# GESAMTPROZESSORANZAHL IST
956	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
957	then
958	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
959	(( ival = $tasks_per_node ))
960	(( pes = numprocs ))
961	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
962	# then
963	# (( pes = pes - 1 ))
964	# fi
965	(( ii = pes / ival ))
966	if (( pes - ii * ival > 0 ))
967	then
968	printf "\n"
969	printf "\n +++ tasks per node (option \"-T\") must be an integral"
970	printf "\n divisor of the total number of processors (option \"-X\")"
971	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
972	locat=tasks_per_node; (( iec = 0 )); exit
973	fi
974	fi
975
976	# IBMY HAT NUR EINEN KNOTEN
977	if [[ $host = ibmy ]]
978	then
979	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
980	then
981	printf "\n"
982	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
983	printf "\n total number of processors (option \"-X\")"
984	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
985	locat=tasks_per_node; (( iec = 0 )); exit
986	fi
987	fi
988
989	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
990	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
991	if [[ $use_openmp = true ]]
992	then
993	threads_per_task=$tasks_per_node
994	tasks_per_node=1
995	fi
996	OOPT="-O $threads_per_task"
997	TOPT="-T $tasks_per_node"
998
999	# GESAMTZAHL DER KNOTEN BESTIMMEN
1000	if [[ "$tasks_per_node" != "" ]]
1001	then
1002	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1003	fi
1004
1005	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1006	# SETZEN
1007	if [[ $node_usage = default ]]
1008	then
1009	if [[ $host = ibms ]]
1010	then
1011	node_usage=shared
1012	else
1013	node_usage=not_shared
1014	fi
1015	fi
1016	if [[ $node_usage != shared && $node_usage != not_shared ]]
1017	then
1018	printf "\n"
1019	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1020	printf "\n \"shared\" or \"not_shared\""
1021	locat=tasks_per_node; (( iec = 0 )); exit
1022	fi
1023
1024	fi
1025
1026	# PRUEFEN, OB HOSTFILE EXISTIERT
1027	if [[ -n $hostfile ]]
1028	then
1029	if [[ ! -f $hostfile ]]
1030	then
1031	printf "\n"
1032	printf "\n +++ hostfile \"$hostfile\" does not exist"
1033	locat=hostfile; exit
1034	fi
1035	fi
1036
1037	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1038	if [[ $host = ibmy && $do_remote = false ]]
1039	then
1040	if [[ ! -f $HOME/.rhosts ]]
1041	then
1042	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1043	printf "\n\n *** file:"
1044	printf "\n $HOME/.rhosts"
1045	printf "\n was created\n"
1046	fi
1047	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1048	then
1049	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1050	printf "\n\n *** file:"
1051	printf "\n $HOME/.rhosts"
1052	printf "\n was extended by the name of the current host\n"
1053	fi
1054	fi
1055
1056
1057
1058	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1059	if [[ $queue = none ]]
1060	then
1061	case $host in
1062	(ibmb) if [[ $node_usage = shared ]]
1063	then
1064	queue=cshare
1065	else
1066	queue=csolo
1067	fi;;
1068	(ibmh) if [[ $node_usage = shared ]]
1069	then
1070	queue=cshare
1071	else
1072	queue=csolo
1073	fi;;
1074	(ibmy) queue=parallel;;
1075	(lctit) queue=default;;
1076	(nech) queue=none;;
1077	(neck) queue=P;;
1078	(unics) queue=unics;;
1079	esac
1080	fi
1081
1082
1083	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1084	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1085	# ERMITTELN
1086	(( i = 0 ))
1087	while (( i < iin ))
1088	do
1089	(( i = i + 1 ))
1090	(( maxcycle = 0 ))
1091
1092	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1093	if [[ "${actionin[$i]}" = di ]]
1094	then
1095	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1096	# REM-MASCHINE AUSWERTEN
1097	eval filename=${pathin[$i]}/${endin[$i]}
1098	else
1099	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1100	# REM-MASCHINE AUSWERTEN
1101	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1102	fi
1103
1104	# PRUEFEN AUF VORHANDENSEIN
1105	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1106	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1107	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1108	then
1109	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1110	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1111	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1112	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1113	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1114	if [[ "${transin[$i]}" != "locopt" ]]
1115	then
1116	printf "\n\n +++ INPUT-file: "
1117	if [[ "${extin[$i]}" = "" ]]
1118	then
1119	printf "\n $filename"
1120	else
1121	printf "\n $filename.${extin[$i]}"
1122	fi
1123	printf "\n does not exist\n"
1124	locat=input; exit
1125	else
1126	transin[$i]="unavailable"
1127	fi
1128	else
1129
1130	# ZYKLUSNUMMER FESTSTELLEN
1131	ls -1 -d $filename > filelist 2>/dev/null
1132	ls -1 -d $filename.* >> filelist 2>/dev/null
1133	while read zeile
1134	do
1135	cycle=$(print $zeile \| cut -f2 -d".")
1136	if [[ "$cycle" = "$zeile" ]]
1137	then
1138	(( icycle = 0 ))
1139	elif [[ "$cycle" = "${extin[$i]}" ]]
1140	then
1141	(( icycle = 0 ))
1142	else
1143	(( icycle = $cycle ))
1144	fi
1145	if (( icycle > maxcycle ))
1146	then
1147	(( maxcycle = icycle ))
1148	file_to_be_used=$zeile
1149	fi
1150	done <filelist
1151	rm filelist
1152
1153	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1154	if (( maxcycle > 0 ))
1155	then
1156	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1157	then
1158	filename=${filename}.$maxcycle.${extin[$i]}
1159	else
1160	filename=${filename}.$maxcycle
1161	fi
1162	else
1163	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1164	then
1165	filename=${filename}.${extin[$i]}
1166	fi
1167	fi
1168
1169	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1170	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1171	absnamein[$i]=$filename
1172	if (( maxcycle > 0 ))
1173	then
1174	if [[ "${actionin[$i]}" = di ]]
1175	then
1176	frelin[$i]=${endin[$i]}.$maxcycle
1177	else
1178	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1179	fi
1180	else
1181	if [[ "${actionin[$i]}" = di ]]
1182	then
1183	frelin[$i]=${endin[$i]}
1184	else
1185	frelin[$i]=${afname}${endin[$i]}
1186	fi
1187	fi
1188
1189	fi
1190	done
1191
1192
1193	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1194	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1195	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1196	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1197	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1198	(( i = 0 ))
1199	while (( i < iout ))
1200	do
1201	(( i = i + 1 ))
1202	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1203	then
1204	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
1205	then
1206	actionout[$i]=""
1207	elif [[ "${actionout[$i]}" = tra ]]
1208	then
1209	actionout[$i]=a
1210	fi
1211	(( maxcycle = 0 ))
1212	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1213	eval catalogname=${pathout[$i]}
1214	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1215	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1216	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1217	then
1218
1219	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1220	if cat /dev/null > $filename
1221	then
1222	rm $filename
1223	else
1224
1225	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1226	if [[ ! -d $catalogname ]]
1227	then
1228	if mkdir -p $catalogname
1229	then
1230	printf "\n\n *** directory:"
1231	printf "\n $catalogname"
1232	printf "\n was created\n"
1233	else
1234	printf "\n\n +++ OUTPUT-file:"
1235	printf "\n $filename"
1236	printf "\n cannot be created, because directory does not exist"
1237	printf "\n and cannot be created either"
1238	printf "\n"
1239	locat=output ; exit
1240	fi 2>/dev/null
1241	else
1242	printf "\n\n +++ OUTPUT-file:"
1243	printf "\n $filename"
1244	printf "\n cannot be created, although directory exists"
1245	printf "\n"
1246	locat=output ; exit
1247	fi
1248	fi 2>/dev/null
1249	else
1250
1251	# ZYKLUSNUMMER FESTSTELLEN
1252	ls -1 -d $filename > filelist 2>/dev/null
1253	ls -1 -d $filename.* >> filelist 2>/dev/null
1254	while read zeile
1255	do
1256	cycle=$(print $zeile \| cut -f2 -d".")
1257	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1258	then
1259	(( icycle = 1 ))
1260	else
1261	(( icycle = $cycle + 1 ))
1262	fi
1263	if (( icycle > maxcycle ))
1264	then
1265	(( maxcycle = icycle ))
1266	fi
1267	done <filelist
1268	rm filelist
1269	fi
1270
1271	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1272	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1273	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1274	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1275	if [[ "${actionout[$i]}" != a ]]
1276	then
1277	if (( maxcycle > 0 ))
1278	then
1279	filename=${filename}.$maxcycle
1280	if cat /dev/null > $filename
1281	then
1282	rm $filename
1283	else
1284	printf "\n +++ OUTPUT-file:"
1285	printf "\n $filename"
1286	printf "\n cannot be created"
1287	locat=output ; exit
1288	fi
1289	fi
1290	else
1291	(( maxcycle = maxcycle - 1 ))
1292	if (( maxcycle > 0 ))
1293	then
1294	filename=${filename}.$maxcycle
1295	fi
1296	fi
1297
1298	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1299	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1300	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1301	pathout[$i]=$filename
1302	if (( maxcycle > 0 ))
1303	then
1304	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1305	else
1306	frelout[$i]=${fname}${endout[$i]}
1307	fi
1308
1309	fi
1310	done
1311
1312
1313	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1314	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1315	then
1316	if [[ "$dvrp_inc" = "" ]]
1317	then
1318	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
1319	printf "\n This is required for the dvrp_graphics package.\n"
1320	locat=dvrp; exit
1321	fi
1322	if [[ "$dvrp_lib" = "" ]]
1323	then
1324	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
1325	printf "\n This is required for the dvrp_graphics package.\n"
1326	locat=dvrp; exit
1327	fi
1328	fi
1329
1330
1331	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1332	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1333	# UEBERSETZT ZU WERDEN)
1334	if [[ "$mainprog" = "" && "$executable" = "" ]]
1335	then
1336	printf "\n +++ neither main program nor executable defined"
1337	locat=source; exit
1338	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1339	then
1340	printf "\n +++ main program as well as executable defined"
1341	locat=source; exit
1342	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1343	then
1344	do_compile=false
1345	fi
1346
1347
1348	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1349	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1350	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1351	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1352	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1353	then
1354
1355	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1356	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1357
1358	if [[ $restart_run != true ]]
1359	then
1360	rm -rf SOURCES_FOR_RUN_$fname
1361	mkdir SOURCES_FOR_RUN_$fname
1362	fi
1363
1364
1365	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1366	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1367	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1368	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1369	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1370	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1371	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1372	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1373	# GESAMMELT
1374	if [[ "$source_list" = WRITE_PERMIT ]]
1375	then
1376
1377	source_list=""
1378	cd $source_path
1379
1380
1381	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1382	Names=$(ls -1 *.f90 2>&1)
1383	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1384	Names=$(ls -1 *.F90 2>&1)
1385	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1386	Names=$(ls -1 *.F 2>&1)
1387	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1388	Names=$(ls -1 *.f 2>&1)
1389	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1390	Names=$(ls -1 *.c 2>&1)
1391	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1392
1393
1394	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1395	for dateiname in $Filenames
1396	do
1397	if [[ -w $dateiname ]]
1398	then
1399	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1400	then
1401	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1402	source_list=$source_list"$dateiname "
1403	fi
1404	fi
1405	done
1406
1407	cd - > /dev/null
1408
1409
1410	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1411	then
1412
1413	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1414	source_list=""
1415	cd $source_path
1416
1417
1418	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1419	if [[ ! -d .svn ]]
1420	then
1421	printf "\n\n +++ source directory"
1422	printf "\n \"$source_path\" "
1423	printf "\n is not under control of \"subversion\"."
1424	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
1425	fi
1426
1427
1428	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1429	Filenames=""
1430	svn status > tmp_mrun
1431	while read line
1432	do
1433	firstc=`echo $line \| cut -c1`
1434	if [[ $firstc = M \|\| $firstc = "?" ]]
1435	then
1436	Name=`echo "$line" \| cut -c8-`
1437	extension=`echo $Name \| cut -d. -f2`
1438	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1439	then
1440	Filenames="$Filenames "$Name
1441	fi
1442	fi
1443	done < tmp_mrun
1444
1445
1446	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1447	for dateiname in $Filenames
1448	do
1449	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1450	source_list=$source_list"$dateiname "
1451	done
1452
1453	cd - > /dev/null
1454
1455
1456	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1457	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1458	# VORHANDEN
1459	elif [[ "$source_list" != "" && $restart_run != true ]]
1460	then
1461
1462	cd $source_path
1463
1464	for filename in $source_list
1465	do
1466
1467	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1468	if [[ $(print $filename \| grep -c "/") != 0 ]]
1469	then
1470	printf "\n +++ source code file: $filename"
1471	printf "\n must not contain (\"/\") "
1472	locat=source; exit
1473	fi
1474
1475	if [[ ! -f $filename ]]
1476	then
1477	printf "\n +++ source code file: $filename"
1478	printf "\n does not exist"
1479	locat=source; exit
1480	else
1481	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1482	fi
1483
1484	done
1485
1486	cd - > /dev/null
1487
1488	fi
1489
1490
1491	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1492	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1493	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1494	if [[ $restart_run != true ]]
1495	then
1496
1497	if [[ ! -f "$source_path/$mainprog" ]]
1498	then
1499	printf "\n\n +++ main program: $mainprog"
1500	printf "\n does not exist in source directory"
1501	printf "\n \"$source_path\"\n"
1502	locat=source; exit
1503	else
1504	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1505	then
1506	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1507	source_list=${mainprog}" $source_list"
1508	fi
1509	fi
1510	fi
1511
1512
1513	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1514	if [[ $restart_run != true && "$add_source_path" != "" ]]
1515	then
1516
1517	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1518	if [[ ! -d $add_source_path ]]
1519	then
1520	printf "\n\n +++ WARNING: additional source code directory"
1521	printf "\n \"$add_source_path\" "
1522	printf "\n does not exist or is not a directory."
1523	printf "\n No source code will be used from this directory!\n"
1524	add_source_path=""
1525	sleep 3
1526	else
1527
1528	cd $add_source_path
1529
1530	Names=$(ls -1 *.f90 2>&1)
1531	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1532	Names=$(ls -1 *.F90 2>&1)
1533	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1534	Names=$(ls -1 *.F 2>&1)
1535	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1536	Names=$(ls -1 *.f 2>&1)
1537	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1538	Names=$(ls -1 *.c 2>&1)
1539	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1540
1541	cd - > /dev/null
1542	cd SOURCES_FOR_RUN_$fname
1543
1544	for dateiname in $AddFilenames
1545	do
1546	if [[ -f $dateiname ]]
1547	then
1548	printf "\n +++ source code file \"$dateiname\" found in additional"
1549	printf "\n source code directory \"$add_source_path\" "
1550	printf "\n as well as in directory \"$source_path\"."
1551	locat=source; exit
1552	fi
1553
1554	cp $add_source_path/$dateiname .
1555	source_list="$source_list $dateiname"
1556
1557	# Default User-Interface von der Liste entfernen, falls Datei
1558	# ein User-Interface enthaelt
1559	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1560	then
1561	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1562	then
1563	rm -rf user_interface.f90
1564	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1565	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1566	printf "\n since a user-interface is found in file"
1567	printf "\n \"$add_source_path/$dateiname\" \n"
1568	sleep 3
1569	else
1570	printf "\n\n *** user-interface file \"$dateiname\" "
1571	printf "\n added to the files to be translated \n"
1572	sleep 3
1573	fi
1574	fi
1575	done
1576
1577	cd - > /dev/null
1578	fi
1579	fi
1580
1581
1582	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1583	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1584	if [[ $restart_run != true && -n $package_list ]]
1585	then
1586
1587	cd $source_path
1588
1589	for package in $package_list
1590	do
1591
1592	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1593
1594	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1595	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1596	# LIEFERT
1597	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1598
1599
1600	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1601	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1602	for source_list_name in $package_source_list
1603	do
1604	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1605	then
1606
1607	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1608	ending=`echo $source_list_name \| cut -f2 -d.`
1609	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1610	then
1611	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1612	source_list="$source_list $source_list_name"
1613	fi
1614	fi
1615	done
1616	done
1617
1618	cd - > /dev/null
1619	fi
1620
1621
1622	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1623	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1624	if [[ "$restart_run" != true ]]
1625	then
1626	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1627	if [[ ! -f $makefile ]]
1628	then
1629	printf "\n +++ file \"$makefile\" does not exist"
1630	locat=make; exit
1631	else
1632	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1633	fi
1634	fi
1635
1636	fi # do_compile=true
1637
1638
1639	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1640	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1641	if [[ $do_compile = true ]]
1642	then
1643
1644	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1645	# ZUSAMMENSETZEN
1646	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1647	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1648	then
1649	cpp_options="${cpp_options},-D__ibm=__ibm"
1650	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1651	then
1652	cpp_options="$cpp_options -D__nec"
1653	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1654	then
1655	cpp_options="$cpp_options -D__lc"
1656	else
1657	cpp_options="$cpp_options -D__$localhost"
1658	fi
1659
1660	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1661	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1662	then
1663	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1664	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1665	else
1666	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1667	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1668	fi
1669
1670	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1671	if [[ -n $package_list ]]
1672	then
1673	for package in $package_list
1674	do
1675	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1676	then
1677	if [[ $package != "dvrp_graphics+1PE" ]]
1678	then
1679	cpp_options="${cpp_options},-D__$package=__$package"
1680	else
1681	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1682	export use_seperate_pe_for_dvrp_output=true
1683	fi
1684	else
1685	if [[ $package != "dvrp_graphics+1PE" ]]
1686	then
1687	cpp_options="$cpp_options -D__$package"
1688	else
1689	cpp_options="$cpp_options -D__dvrp_graphics"
1690	export use_seperate_pe_for_dvrp_output=true
1691	fi
1692	fi
1693	done
1694	fi
1695
1696	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1697	if [[ -n $cpp_opts ]]
1698	then
1699	for popts in $cpp_opts
1700	do
1701	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1702	then
1703	cpp_options="${cpp_options},-D__$popts=__$popts"
1704	else
1705	cpp_options="$cpp_options -D__$popts"
1706	fi
1707	done
1708	fi
1709
1710	else
1711
1712
1713	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1714	if [[ $do_remote = false ]]
1715	then
1716	if [[ ! -f $executable ]]
1717	then
1718	printf "\n +++ executable file: $executable"
1719	printf "\n does not exist"
1720	locat=executable; exit
1721	fi
1722	fi
1723	fi
1724
1725
1726	# JOBMODUS FESTSTELLEN
1727	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1728	then
1729	jobmo=BATCH
1730	else
1731	jobmo=INTERACTIVE
1732	fi
1733
1734
1735	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1736	# DURCH BENUTZER ANDERWEITIG VEREINBART
1737	if [[ "$compiler_name" = "" ]]
1738	then
1739
1740	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
1741	locat=compiler_name; exit
1742
1743	fi
1744
1745
1746	# COMPILER AUF NECK UEBERSCHREIBEN
1747	[[ $localhost = neck ]] && compiler_name=mpif90
1748
1749
1750
1751	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1752	kennung=$RANDOM
1753	if [[ "$tmp_user_catalog" = "" ]]
1754	then
1755	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1756	then
1757	tmp_user_catalog=$TMPDIR
1758	elif [[ $localhost = nech ]]
1759	then
1760	tmp_user_catalog=$WRKSHR
1761	else
1762	tmp_user_catalog=/tmp
1763	fi
1764	fi
1765	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1766
1767
1768	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1769	# BESTIMMEN
1770	if [[ "$tmp_data_catalog" = "" ]]
1771	then
1772	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
1773	then
1774	tmp_data_catalog=$WORK/mrun_restart_data
1775	elif [[ $localhost = nech ]]
1776	then
1777	tmp_data_catalog=$WRKSHR/mrun_restart_data
1778	else
1779	tmp_data_catalog=/tmp/mrun_restart_data
1780	fi
1781	fi
1782
1783
1784	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1785	# ERSETZEN
1786	if [[ $do_remote = false && $do_compile = true ]]
1787	then
1788	eval fopts=\"$fopts\"
1789	eval lopts=\"$lopts\"
1790	fi
1791
1792
1793
1794	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1795	fopts="$fopts $netcdf_inc $dvrp_inc"
1796	lopts="$lopts $netcdf_lib $dvrp_lib"
1797	ROPTS="$ropts"
1798	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
1799	then
1800	XOPT="-X $numprocs"
1801	fi
1802
1803
1804
1805	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1806	# GRAMM BENOETIGT
1807	done=false
1808	while [[ $done = false ]]
1809	do
1810	cputime=$cpumax
1811	if (( $cputime == 0 ))
1812	then
1813	printf "\n +++ cpu-time is undefined"
1814	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
1815	printf "\n >>> "
1816	read cputime 1>/dev/null 2>&1
1817	else
1818	done=true
1819	fi
1820	cpumax=$cputime
1821	done
1822
1823	(( minuten = cputime / 60 ))
1824	(( sekunden = cputime - minuten * 60 ))
1825
1826
1827	# PRUEFEN DER KERNSPEICHERANFORDERUNG
1828	if [[ $do_batch = true ]]
1829	then
1830	done=false
1831	while [[ $done = false ]]
1832	do
1833	if (( memory == 0 ))
1834	then
1835	printf "\n +++ memory demand is undefined"
1836	printf "\n >>> Please type memory in MByte per process as INTEGER:"
1837	printf "\n >>> "
1838	read memory 1>/dev/null 2>&1
1839	else
1840	done=true
1841	fi
1842	done
1843	fi
1844
1845
1846	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
1847	if [[ $do_remote = true && -z $remote_username ]]
1848	then
1849	while [[ -z $remote_username ]]
1850	do
1851	printf "\n +++ username on remote host \"$host\" is undefined"
1852	printf "\n >>> Please type username:"
1853	printf "\n >>> "
1854	read remote_username
1855	done
1856	mc="$mc -u$remote_username"
1857	fi
1858
1859	###########################################################################
1860	# HEADER-AUSGABE
1861	###########################################################################
1862
1863
1864	calltime=$(date)
1865	printf "\n"
1866	# [[ $silent = false ]] && clear
1867	printf "#--------------------------------------------------------------# \n"
1868	printf "\| $version$calltime \| \n"
1869	printf "\| \| \n"
1870	spalte1="called on:"; spalte2=$localhost_realname
1871	printf "\| $spalte1$spalte2 \| \n"
1872	if [[ $local_compile = false ]]
1873	then
1874	if [[ $do_remote = true ]]
1875	then
1876	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
1877	else
1878	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
1879	fi
1880	else
1881	spalte1="compiling test only!"; spalte2=""
1882	fi
1883	printf "\| $spalte1$spalte2 \| \n"
1884	if [[ -n $numprocs ]]
1885	then
1886	spalte1="number of PEs:"; spalte2=$numprocs
1887	printf "\| $spalte1$spalte2 \| \n"
1888	fi
1889	if [[ -n $tasks_per_node ]]
1890	then
1891	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
1892	printf "\| $spalte1$spalte2 \| \n"
1893	fi
1894	if [[ $threads_per_task != 1 ]]
1895	then
1896	spalte1="threads per task:"; spalte2="$threads_per_task"
1897	printf "\| $spalte1$spalte2 \| \n"
1898	fi
1899	printf "\| \| \n"
1900	if [[ $do_compile = true ]]
1901	then
1902	spalte1=cpp-directives:; spalte2=$cpp_options
1903	printf "\| $spalte1$spalte2 \| \n"
1904	zeile=$(echo "$cpp_options" \| cut -c41-)
1905	while [[ "$zeile" != "" ]]
1906	do
1907	spalte1=""
1908	spalte2=$zeile
1909	printf "\| $spalte1$spalte2 \| \n"
1910	zeile=$(echo "$zeile" \| cut -c41-)
1911	done
1912
1913	spalte1=compiler-options:; spalte2="$fopts"
1914	printf "\| $spalte1$spalte2 \| \n"
1915	zeile=$(echo "$fopts" \| cut -c41-)
1916	while [[ "$zeile" != "" ]]
1917	do
1918	spalte1=""
1919	spalte2=$zeile
1920	printf "\| $spalte1$spalte2 \| \n"
1921	zeile=$(echo "$zeile" \| cut -c41-)
1922	done
1923
1924	spalte1=linker-options:; spalte2=$lopts
1925	printf "\| $spalte1$spalte2 \| \n"
1926	zeile=$(echo "$lopts" \| cut -c41-)
1927	while [[ "$zeile" != "" ]]
1928	do
1929	spalte1=""
1930	spalte2=$zeile
1931	printf "\| $spalte1$spalte2 \| \n"
1932	zeile=$(echo "$zeile" \| cut -c41-)
1933	done
1934
1935	spalte1="main program":; spalte2=$mainprog
1936	printf "\| $spalte1$spalte2 \| \n"
1937	else
1938	spalte1=executable:; spalte2=$executable
1939	printf "\| $spalte1$spalte2 \| \n"
1940	fi
1941	printf "\| \| \n"
1942	spalte1="base name of files":; spalte2=$fname
1943	printf "\| $spalte1$spalte2 \| \n"
1944	if [[ $fname != $afname ]]
1945	then
1946	spalte1="base name of input files":; spalte2=$afname
1947	printf "\| $spalte1$spalte2 \| \n"
1948	fi
1949	spalte1="INPUT control list":; spalte2=$input_list
1950	printf "\| $spalte1$spalte2 \| \n"
1951	spalte1="OUTPUT control list":; spalte2=$output_list
1952	printf "\| $spalte1$spalte2 \| \n"
1953
1954	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
1955	then
1956	spalte1="memory demand / PE":; spalte2="$memory MB"
1957	printf "\| $spalte1$spalte2 \| \n"
1958	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
1959	printf "\| $spalte1$spalte2 \| \n"
1960	fi
1961
1962	if [[ $do_compile = true ]]
1963	then
1964	printf "\| \| \n"
1965	printf "\| Files to be compiled: \| \n"
1966	zeile=$source_list
1967	while [[ "$zeile" != "" ]]
1968	do
1969	spalte3=$zeile
1970	printf "\| $spalte3 \| \n"
1971	zeile=$(echo "$zeile" \| cut -c61-)
1972	done
1973	fi
1974	printf "#--------------------------------------------------------------#"
1975
1976
1977
1978	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
1979	if [[ $do_trace = true ]]
1980	then
1981	(( i = 0 ))
1982	while (( i < iin ))
1983	do
1984	(( i = i + 1 ))
1985	if (( i == 1 ))
1986	then
1987	printf "\n\n >>> INPUT-file assignments:\n"
1988	fi
1989	printf "\n ${localin[$i]} : ${absnamein[$i]}"
1990	done
1991	(( i = 0 ))
1992	while (( i < iout ))
1993	do
1994	(( i = i + 1 ))
1995	if (( i == 1 ))
1996	then
1997	printf "\n\n >>> OUTPUT-file assignments:\n"
1998	fi
1999	printf "\n ${localout[$i]} : ${pathout[$i]}"
2000	done
2001	(( i = 0 ))
2002	while (( i < iic ))
2003	do
2004	(( i = i + 1 ))
2005	if (( i == 1 ))
2006	then
2007	printf "\n\n >>> INPUT-commands:\n"
2008	fi
2009	printf "\n ${in_command[$i]}"
2010	done
2011	(( i = 0 ))
2012	while (( i < ioc ))
2013	do
2014	(( i = i + 1 ))
2015	if (( i == 1 ))
2016	then
2017	printf "\n\n >>> OUTPUT-commands:\n"
2018	fi
2019	printf "\n ${out_command[$i]}"
2020	done
2021	fi
2022
2023
2024	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2025	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2026	then
2027	antwort=dummy
2028	printf "\n\n"
2029	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2030	do
2031	printf " >>> everything o.k. (y/n) ? "
2032	read antwort
2033	done
2034	if [[ $antwort = n \|\| $antwort = N ]]
2035	then
2036	locat=user_abort; (( iec = 0 )); exit
2037	fi
2038	if [[ $do_batch = true ]]
2039	then
2040	printf " >>> batch-job will be created and submitted"
2041	else
2042	if [[ $local_compile = false ]]
2043	then
2044	printf " >>> MRUN will now continue to execute on this machine"
2045	else
2046	printf " >>> a test compilation will now be carried out on this machine"
2047	fi
2048	fi
2049	fi
2050
2051
2052
2053
2054	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2055	# CHENDE AKTIONEN DURCHGEFUEHRT
2056	if [[ $do_batch = false ]]
2057	then
2058
2059
2060	# TEMPORAEREN KATALOG ERZEUGEN
2061	mkdir -p $TEMPDIR
2062	chmod go+rx $TEMPDIR
2063	tmpcreate=true
2064
2065
2066	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2067	# TEMPORAERES VERZEICHNIS KOPIEREN
2068	if [[ $do_compile = true ]]
2069	then
2070
2071	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2072	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2073	if [[ $localhost = nech ]]
2074	then
2075	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2076	if mkdir -p $TEMPDIR_COMPILE
2077	then
2078	printf "\n *** \"$TEMPDIR_COMPILE\" "
2079	printf "\n is generated as temporary directory for cross compiling\n"
2080	else
2081	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2082	printf "\n needed for cross compilation failed"
2083	locat=compile
2084	exit
2085	fi
2086	else
2087	TEMPDIR_COMPILE=$TEMPDIR
2088	fi
2089
2090
2091	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2092	line=""
2093	grep "%depository_path" $config_file > tmp_mrun
2094	while read line
2095	do
2096	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2097	then
2098	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2099	then
2100	global_depository_path=`echo $line \| cut -d" " -s -f2`
2101	fi
2102	fi
2103	done < tmp_mrun
2104
2105	line=""
2106	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2107	while read line
2108	do
2109	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2110	then
2111	local_depository_path=`echo $line \| cut -d" " -s -f2`
2112	fi
2113	done < tmp_mrun
2114
2115	if [[ "$local_depository_path" = "" ]]
2116	then
2117	if [[ "$global_depository_path" != "" ]]
2118	then
2119	local_depository_path=$global_depository_path
2120	else
2121	printf "\n\n +++ no depository path found in configuration file"
2122	printf "\n for local host \"$localhost\" "
2123	printf "\n please set \"\%depository_path\" in configuration file\n"
2124	locat=config_file; exit
2125	fi
2126	fi
2127	eval local_depository_path=$local_depository_path
2128
2129	basename=`print $mainprog \| cut -f1 -d"."`
2130	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2131	if [[ ! -f $make_depository ]]
2132	then
2133	printf "\n"
2134	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2135	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2136	else
2137	cp $make_depository $TEMPDIR_COMPILE
2138	cd $TEMPDIR_COMPILE
2139	tar -xf $make_depository > /dev/null 2>&1
2140	cd - > /dev/null
2141	fi
2142
2143	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2144
2145	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2146	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2147	# MAKEFILE EINTRAGEN
2148	cd $TEMPDIR_COMPILE
2149	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2150	if [[ "$interface_file" != "" ]]
2151	then
2152	interface_file=`echo $interface_file \| cut -d"." -f1`
2153	mv Makefile Makefile_old
2154	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2155	fi
2156	cd - > /dev/null
2157	else
2158	cp $executable ${TEMPDIR}/a.out
2159	fi
2160
2161
2162	# WECHSEL IN TEMPORAEREN KATALOG
2163	cd $TEMPDIR
2164	printf "\n *** changed to temporary directory: $TEMPDIR"
2165
2166
2167	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2168	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2169	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2170	# ERMITTELN
2171	(( i = 0 ))
2172	while (( i < iout ))
2173	do
2174	(( i = i + 1 ))
2175	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2176	then
2177	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2178	else
2179	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2180	fi
2181	done
2182
2183
2184	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2185	if [[ $do_compile = true ]]
2186	then
2187
2188
2189	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2190	printf "\n\n\n *** compilation starts \n$striche\n"
2191	printf " *** compilation with make using following options:\n"
2192	printf " compilername: $compiler_name\n"
2193	printf " options: $fopts\n"
2194	printf " preprocessor-directives: $cpp_options \n"
2195	printf " linker-options: $lopts \n"
2196	printf " source code files: $source_list \n"
2197
2198	if [[ $localhost = nech ]]
2199	then
2200	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2201	cp $TEMPDIR_COMPILE/a.out .
2202	[[ $? != 0 ]] && compile_error=true
2203	rm -rf $TEMPDIR_COMPILE
2204	else
2205	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2206	fi
2207
2208	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2209	then
2210	printf "\n +++ error occured while compiling or linking"
2211	locat=compile
2212	exit
2213	else
2214	printf "$striche\n *** compilation finished \n"
2215	fi
2216	fi
2217
2218
2219	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2220	if [[ $local_compile = true ]]
2221	then
2222	cd $HOME
2223	rm -rf $TEMPDIR
2224	locat=local_compile; exit
2225	fi
2226
2227
2228	# BEREITSTELLEN DER INPUT-DATEIEN
2229	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2230	(( i = 0 ))
2231	while (( i < iin ))
2232	do
2233	(( i = i + 1 ))
2234	if (( i == 1 ))
2235	then
2236	printf "\n\n *** providing INPUT-files:\n$striche"
2237	fi
2238
2239
2240	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2241	if [[ "${transin[$i]}" = unavailable ]]
2242	then
2243	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2244	then
2245	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2246	printf "\n is not available!"
2247	else
2248	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2249	printf "\n is not available!"
2250	fi
2251	continue
2252	fi
2253
2254	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2255	files_for_pes=false; datentyp=file
2256	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2257	then
2258	files_for_pes=true; datentyp=directory
2259	actionin[$i]=""
2260	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2261	then
2262	actionin[$i]=""
2263	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2264	then
2265	files_for_pes=true; datentyp=directory
2266	actionin[$i]="ar"
2267	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2268	then
2269	actionin[$i]="ar"
2270	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2271	then
2272	files_for_pes=true; datentyp=directory
2273	actionin[$i]="fl"
2274	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2275	then
2276	actionin[$i]="fl"
2277	fi
2278
2279	if [[ $files_for_pes = true ]]
2280	then
2281	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2282	else
2283	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2284	fi
2285
2286	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2287	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2288	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2289	# SERVER ZU HOLEN
2290	if [[ "${actionin[$i]}" = fl ]]
2291	then
2292	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2293	if [[ $files_for_pes = false ]]
2294	then
2295	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2296	then
2297	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2298	got_tmp[$i]=true
2299	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2300	then
2301	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2302	printf "\n *** trying to use backup copy in \"$WORK\" "
2303	cp $WORK/${frelin[$i]} ${localin[$i]}
2304	else
2305	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2306	printf "\n or \"$tmp_data_catalog\" does not exist!"
2307	printf "\n *** trying to get copy from archive"
2308	actionin[$i]=ar
2309	fi
2310	else
2311	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2312	then
2313	mkdir ${localin[$i]}
2314	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
2315	got_tmp[$i]=true
2316	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2317	then
2318	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2319	printf "\n *** trying to use backup copy in \"$WORK\" "
2320	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2321	else
2322	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2323	printf "\n or \"$tmp_data_catalog\" does not exist!"
2324	printf "\n *** trying to get copy from archive"
2325	actionin[$i]=ar
2326	fi
2327	fi
2328	fi
2329
2330
2331	# DATEI LIEGT AUF ARCHIV-SERVER
2332	if [[ "${actionin[$i]}" = ar ]]
2333	then
2334
2335	if [[ $files_for_pes = false ]]
2336	then
2337	printf "\n file will be restored from archive-system ($archive_system)!"
2338	else
2339	printf "\n directory will be restored from archive-system ($archive_system)!"
2340	fi
2341
2342	file_restored=false
2343
2344	if [[ $archive_system = asterix ]]
2345	then
2346	do_stagein=true
2347	(( stagein_anz = 0 ))
2348	while [[ $do_stagein = true ]]
2349	do
2350	if [[ $files_for_pes = false ]]
2351	then
2352	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2353	else
2354	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2355	fi
2356	cat STAGEIN_OUTPUT
2357	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2358	then
2359	file_restored=true
2360	do_stagein=false
2361	else
2362	(( stagein_anz = stagein_anz + 1 ))
2363	if (( stagein_anz == 10 ))
2364	then
2365	printf "\n +++ stagein stoped after 10 tries"
2366	locat=stage
2367	exit
2368	fi
2369	printf "\n +++ restoring from archive failed, trying again:"
2370	sleep 900
2371	fi
2372	done
2373	elif [[ $archive_system = DMF ]]
2374	then
2375	if [[ $files_for_pes = false ]]
2376	then
2377	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2378	locat=DMF
2379	exit
2380	else
2381	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2382	cp -r $ARCHIVE/${frelin[$i]} $PWD
2383	file_restored=true
2384	fi
2385	elif [[ $archive_system = tivoli ]]
2386	then
2387	if [[ $files_for_pes = false ]]
2388	then
2389	if [[ $localhost = ibmh ]]
2390	then
2391	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2392	else
2393	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2394	fi
2395	else
2396	(( inode = 0 ))
2397	while (( inode < nodes ))
2398	do
2399	if [[ $localhost = ibmh ]]
2400	then
2401	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2402	else
2403	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2404	fi
2405	(( inode = inode + 1 ))
2406	done
2407	fi
2408	file_restored=true
2409	elif [[ $archive_system = ut ]]
2410	then
2411	if [[ $files_for_pes = false ]]
2412	then
2413	cp $UT/${frelin[$i]} .
2414	else
2415	(( inode = 0 ))
2416	while (( inode < nodes ))
2417	do
2418	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2419	(( inode = inode + 1 ))
2420	done
2421	fi
2422	file_restored=true
2423	else
2424	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2425	locat=rearchive
2426	exit
2427	fi
2428
2429	if [[ $file_restored = true ]]
2430	then
2431
2432	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2433	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2434	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2435	if [[ $files_for_pes = false ]]
2436	then
2437	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2438	else
2439	mkdir $tmp_data_catalog/${frelin[$i]}
2440	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2441	fi
2442	got_tmp[$i]=true
2443
2444	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2445	mv ${frelin[$i]} ${localin[$i]}
2446
2447	fi
2448	fi
2449
2450
2451	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2452	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2453	then
2454
2455	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2456	then
2457
2458	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2459	printf "\n file will be provided for $numprocs processors"
2460	mkdir ${localin[$i]}
2461	ival=$numprocs
2462	(( ii = 0 ))
2463	while (( ii <= ival-1 ))
2464	do
2465	if (( ii < 10 ))
2466	then
2467	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2468	elif (( ii < 100 ))
2469	then
2470	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2471	elif (( ii < 1000 ))
2472	then
2473	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2474	else
2475	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2476	fi
2477	(( ii = ii + 1 ))
2478	done
2479
2480	else
2481
2482	if [[ $files_for_pes = true ]]
2483	then
2484
2485	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2486	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2487	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2488	# PER MOVE UMBENANNT WERDEN
2489	printf "\n providing $numprocs files for the respective processors"
2490	mkdir ${localin[$i]}
2491	cp -r ${absnamein[$i]}/* ${localin[$i]}
2492
2493	else
2494	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2495	cp ${absnamein[$i]} ${localin[$i]}
2496	fi
2497	fi
2498	fi
2499
2500	done
2501	if (( i != 0 ))
2502	then
2503	printf "\n$striche\n *** all INPUT-files provided \n"
2504	fi
2505
2506
2507	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2508	# LESEN VON PALM)
2509	cat > ENVPAR << %%END%%
2510	&envpar run_identifier = '$fname', host = '$localhost',
2511	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2512	maximum_cpu_time_allowed = ${cpumax}.,
2513	revision = '$global_revision' /
2514
2515	%%END%%
2516
2517
2518	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2519	(( i = 0 ))
2520	while (( i < iic ))
2521	do
2522	(( i = i + 1 ))
2523	if (( i == 1 ))
2524	then
2525	printf "\n\n *** execution of INPUT-commands:\n$striche"
2526	fi
2527	printf "\n >>> ${in_command[$i]}"
2528	eval ${in_command[$i]}
2529	if (( i == iic ))
2530	then
2531	printf "\n$striche\n"
2532	fi
2533	done
2534
2535
2536	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2537	cpurest=${cpumax}.
2538
2539
2540	# PROGRAMMSTART
2541	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2542	PATH=$PATH:$TEMPDIR
2543
2544	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2545	then
2546	if [[ "$ENVIRONMENT" = BATCH ]]
2547	then
2548	printf "\n +++ debug is allowed in interactive mode only"
2549	locat=debug
2550	exit
2551	fi
2552	if [[ $localhost = decalpha ]]
2553	then
2554	dxladebug a.out
2555	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2556	then
2557
2558	# SETUP THE IBM MPI ENVIRONMENT
2559	export MP_SHARED_MEMORY=yes
2560	export AIXTHREADS_SCOPE=S
2561	export OMP_NUM_THREADS=$threads_per_task
2562	export AUTHSTATE=files
2563	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2564
2565	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2566	export MP_ADAPTER_USE=shared
2567	export MP_CPU_USE=multiple
2568	export MP_TIMEOUT=1200
2569
2570	unset MP_TASK_AFFINITY
2571
2572	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2573	#(( ii = 1 ))
2574	#while (( ii <= $numprocs ))
2575	#do
2576	# echo $localhost_realname >> hostfile
2577	# (( ii = ii + 1 ))
2578	#done
2579	#export MP_HOSTFILE=hostfile
2580
2581	if [[ "$LOADLBATCH" = yes ]]
2582	then
2583	totalview poe a.out $ROPTS
2584	else
2585	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2586	export TVDSVRLAUNCHCMD=ssh
2587	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2588	fi
2589	else
2590	printf "\n +++ no debug available on \"$localhost\" "
2591	printf "\n or not implemented in mrun so far"
2592	locat=debug
2593	exit
2594	fi
2595	else
2596	if [[ -n $numprocs ]]
2597	then
2598
2599	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2600	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2601	then
2602	# SETUP THE IBM MPI ENVIRONMENT
2603	export MP_SHARED_MEMORY=yes
2604	export AIXTHREAD_SCOPE=S
2605	export OMP_NUM_THREADS=$threads_per_task
2606	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2607	export AUTHSTATE=files
2608	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2609	# export MP_PRINTENV=yes
2610
2611	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2612	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2613	export MP_WAIT_MODE=poll
2614	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2615	# export MP_EAGER_LIMIT=65535
2616
2617	# # TESTWEISE FUER TURBOMPI (JAN 05)
2618	# export MPJ_MTAB=128
2619	# export MPJ_ALLTOALL=1
2620	# export MPJ_ALLTOALLV=1
2621
2622	if [[ "$LOADLBATCH" = yes ]]
2623	then
2624	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
2625	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
2626	then
2627	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
2628	else
2629	poe ./a.out $ROPTS
2630	fi
2631	else
2632	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
2633	then
2634	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
2635	elif [[ $localhost = ibmy ]]
2636	then
2637	if [[ -f $hostfile ]]
2638	then
2639	cp $hostfile hostfile
2640	else
2641	(( ii = 1 ))
2642	while (( ii <= $numprocs ))
2643	do
2644	echo $localhost_realname >> hostfile
2645	(( ii = ii + 1 ))
2646	done
2647	fi
2648	export MP_HOSTFILE=hostfile
2649	./a.out -procs $tasks_per_node $ROPTS
2650	else
2651	if [[ "$host_file" = "" ]]
2652	then
2653	printf "\n +++ no hostfile given in configuration file"
2654	locat=config_file
2655	exit
2656	else
2657	eval host_file=$host_file
2658	fi
2659	export MP_HOSTFILE=$host_file
2660	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
2661	fi
2662	fi
2663	elif [[ $host = nech \|\| $host = neck ]]
2664	then
2665	(( ii = nodes ))
2666	if [[ $ii = 1 ]]
2667	then
2668	export F_ERRCNT=0 # acceptable number of errors before program is stopped
2669	export MPIPROGINF=YES
2670	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
2671	echo "*** execution on single node with mpirun"
2672	mpirun -np $numprocs ./a.out $ROPTS
2673	else
2674	(( i = 0 ))
2675	while (( i < ii ))
2676	do
2677	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
2678	(( i = i + 1 ))
2679	done
2680
2681	echo "#!/bin/sh" > mpi_exec_shell
2682	echo " " >> mpi_exec_shell
2683	echo "set -u" >> mpi_exec_shell
2684	echo "F_ERRCNT=0" >> mpi_exec_shell
2685	echo "MPIPROGINV=YES" >> mpi_exec_shell
2686	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
2687	echo "cpurest=$cpurest" >> mpi_exec_shell
2688	echo "fname=$fname" >> mpi_exec_shell
2689	echo "localhost=$localhost" >> mpi_exec_shell
2690	echo "return_addres=$return_addres" >> mpi_exec_shell
2691	echo "return_username=$return_username" >> mpi_exec_shell
2692	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
2693	echo "write_binary=$write_binary" >> mpi_exec_shell
2694	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2695	echo " " >> mpi_exec_shell
2696	echo "export F_ERRCNT" >> mpi_exec_shell
2697	echo "export MPIPROGINV" >> mpi_exec_shell
2698	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
2699	echo "export cpurest" >> mpi_exec_shell
2700	echo "export fname" >> mpi_exec_shell
2701	echo "export localhost" >> mpi_exec_shell
2702	echo "export return_addres" >> mpi_exec_shell
2703	echo "export return_username" >> mpi_exec_shell
2704	echo "export tasks_per_node" >> mpi_exec_shell
2705	echo "export write_binary" >> mpi_exec_shell
2706	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
2707	echo " " >> mpi_exec_shell
2708	echo "exec ./a.out" >> mpi_exec_shell
2709
2710	chmod u+x mpi_exec_shell
2711	export MPIPROGINF=YES
2712	mpirun -f multinode_config &
2713	wait
2714
2715	fi
2716	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
2717	then
2718
2719	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
2720	# DOES NOT EXIST
2721	if [[ -f $hostfile ]]
2722	then
2723	cp $hostfile hostfile
2724	else
2725	(( ii = 1 ))
2726	while (( ii <= $numprocs / $threads_per_task ))
2727	do
2728	echo $localhost_realname >> hostfile
2729	(( ii = ii + 1 ))
2730	done
2731	fi
2732	(( ii = $numprocs / $threads_per_task ))
2733	eval zeile=\"`head -n $ii hostfile`\"
2734	printf "\n *** running on: $zeile"
2735	export OMP_NUM_THREADS=$threads_per_task
2736	if [[ $threads_per_task != 1 ]]
2737	then
2738	printf "\n threads per task: $threads_per_task"
2739	fi
2740	if [[ $run_coupled_model = false ]]
2741	then
2742	printf "\n\n"
2743	mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2744	else
2745	(( iii = ii / 2 ))
2746	printf "\n coupled run ($iii atmosphere, $iii ocean)"
2747	printf "\n\n"
2748	mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
2749	mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
2750	wait
2751	fi
2752
2753	# if [[ $scirocco = true ]]
2754	# then
2755	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
2756	# else
2757	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
2758	# fi
2759
2760	elif [[ $host = decalpha ]]
2761	then
2762	dmpirun -np $numprocs a.out $ROPTS
2763	elif [[ $host = lctit ]]
2764	then
2765	export runfile=runfile.$kennung
2766
2767	echo "cd $PWD" > $runfile
2768	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
2769	echo "export cpurest=$cpurest" >> $runfile
2770	echo "export fname=$fname" >> $runfile
2771	echo "export localhost=$localhost" >> $runfile
2772	echo "export return_addres=$return_addres" >> $runfile
2773	echo "export return_username=$return_username" >> $runfile
2774	echo "export tasks_per_node=$tasks_per_node" >> $runfile
2775	echo "export write_binary=$write_binary" >> $runfile
2776	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
2777	echo "./a.out" >> $runfile
2778	chmod u+x $runfile
2779
2780	if [[ "$QUEUE" = interactive ]]
2781	then
2782	mpirun -np $numprocs a.out $ROPTS
2783	else
2784	n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
2785	fi
2786
2787	rm $runfile
2788	else
2789	mpprun -n $numprocs a.out $ROPTS
2790	fi
2791	[[ $? != 0 ]] && execution_error=true
2792
2793
2794	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
2795	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
2796	then
2797	apprentice
2798	fi
2799	else
2800	a.out $ROPTS
2801	fi
2802	fi
2803	if [[ $? != 0 \|\| $execution_error = true ]]
2804	then
2805
2806	# ABBRUCH BEI LAUFZEITFEHLER
2807	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2808	printf "\n +++ runtime error occured"
2809	locat=execution
2810	exit
2811	else
2812	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
2813	printf "\n$striche\n *** execution finished \n"
2814	fi
2815
2816
2817
2818	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
2819	(( i = 0 ))
2820	while (( i < ioc ))
2821	do
2822	(( i = i + 1 ))
2823	if (( i == 1 ))
2824	then
2825	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
2826	fi
2827	printf "\n >>> ${out_command[$i]}"
2828	eval ${out_command[$i]}
2829	if (( i == ioc ))
2830	then
2831	printf "\n$striche\n"
2832	fi
2833	done
2834
2835
2836	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
2837	if [[ $do_trace = true ]]
2838	then
2839	printf "\n\n"
2840	ls -al
2841	fi
2842
2843
2844
2845	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
2846	(( i = 0 ))
2847	while (( i < iout ))
2848	do
2849	(( i = i + 1 ))
2850	if (( i == 1 ))
2851	then
2852	printf "\n\n *** saving OUTPUT-files:\n$striche"
2853	fi
2854
2855	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2856	files_for_pes=false; filetyp=file
2857	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
2858	then
2859	files_for_pes=true; filetyp=directory
2860	actionout[$i]=""
2861	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
2862	then
2863	actionout[$i]=""
2864	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
2865	then
2866	files_for_pes=true; filetyp=directory
2867	actionout[$i]="ar"
2868	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
2869	then
2870	actionout[$i]="ar"
2871	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
2872	then
2873	files_for_pes=true; filetyp=directory
2874	actionout[$i]="fl"
2875	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
2876	then
2877	actionout[$i]="fl"
2878	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
2879	then
2880	files_for_pes=true; filetyp=directory
2881	actionout[$i]="tr"
2882	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
2883	then
2884	actionout[$i]="tr"
2885	fi
2886
2887	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
2888	then
2889	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
2890	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
2891	then
2892	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
2893	else
2894
2895
2896	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2897	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2898	# REMOTE-RECHNUNGEN
2899	if [[ "${actionout[$i]}" = tr ]]
2900	then
2901	if [[ $localhost != $fromhost ]]
2902	then
2903	if [[ $files_for_pes = false ]]
2904	then
2905	cps=""
2906	cst=""
2907	else
2908	cps=-c
2909	cst="/"
2910	fi
2911	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2912	then
2913
2914	# TRANSFER IN EIGENSTAENDIGEM JOB
2915	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
2916	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
2917	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
2918	if [[ $files_for_pes = false ]]
2919	then
2920	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
2921	else
2922	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
2923	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
2924	fi
2925
2926	echo "set -x" > transfer_${localout[$i]}
2927	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
2928
2929	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
2930	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
2931	printf "\n or higher cycle\n"
2932	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
2933
2934	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
2935
2936	if [[ $localhost = nech ]]
2937	then
2938	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2939	else
2940	if [[ "$LOGNAME" = b323013 ]]
2941	then
2942	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2943	else
2944	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
2945	fi
2946	fi
2947
2948	else
2949
2950	# TRANSFER INNERHALB DIESES JOBS
2951	transfer_failed=false
2952	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
2953	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
2954	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
2955	[[ $? != 0 ]] && transfer_failed=true
2956
2957	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
2958	# LOKALER MASCHINE ANLEGEN
2959	if [[ $transfer_failed = true ]]
2960	then
2961	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
2962	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
2963
2964	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
2965	# ANLEGEN.
2966	eval local_catalog=${pathout[$i]}
2967	if [[ ! -d $local_catalog ]]
2968	then
2969	printf " *** local directory does not exist. Trying to create:\n"
2970	printf " $local_catalog \n"
2971	mkdir -p $local_catalog
2972	fi
2973	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
2974	transfer_problems=true
2975	fi
2976	fi
2977	else
2978
2979	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
2980	actionout[$i]=""
2981	fi
2982	fi
2983
2984
2985	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
2986	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
2987	# REMOTE-RECHNUNGEN
2988	if [[ "${actionout[$i]}" = tra ]]
2989	then
2990	if [[ $localhost != $fromhost ]]
2991	then
2992	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
2993	then
2994
2995	# TRANSFER IN EIGENSTAENDIGEM JOB
2996	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
2997	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
2998	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
2999	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3000
3001	echo "set -x" > transfer_${localout[$i]}
3002	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3003
3004	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3005	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3006	printf "\n or higher cycle\n"
3007	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3008
3009	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3010
3011	if [[ $localhost = nech ]]
3012	then
3013	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3014	else
3015	if [[ $LOGNAME = b323013 ]]
3016	then
3017	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3018	else
3019	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3020	fi
3021	fi
3022
3023	else
3024
3025	# TRANSFER INNERHALB DIESES JOBS
3026	transfer_failed=false
3027	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3028	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3029	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3030	[[ $? != 0 ]] && transfer_failed=true
3031
3032	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3033	# LOKALER MASCHINE ANLEGEN
3034	if [[ $transfer_failed = true ]]
3035	then
3036	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3037	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3038
3039	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3040	# ANLEGEN
3041	eval local_catalog=${pathout[$i]}
3042	if [[ ! -d $local_catalog ]]
3043	then
3044	printf " *** local directory does not exist. Trying to create:\n"
3045	printf " $local_catalog \n"
3046	mkdir -p $local_catalog
3047	fi
3048
3049	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3050	transfer_problems=true
3051	fi
3052	fi
3053	else
3054
3055	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3056	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3057	actionout[$i]=a
3058	fi
3059	fi
3060
3061
3062	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3063	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3064	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3065	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3066	if [[ "${actionout[$i]}" = fl ]]
3067	then
3068	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3069	chmod g+rx $tmp_data_catalog
3070	if [[ $files_for_pes = false ]]
3071	then
3072	printf "\n >>> OUTPUT: ${localout[$i]} to"
3073	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3074	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3075	else
3076	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3077	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3078	mkdir $tmp_data_catalog/${frelout[$i]}
3079	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3080	fi
3081
3082
3083	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3084	if [[ $store_on_archive_system = true ]]
3085	then
3086
3087	if [[ $archive_system = asterix ]]
3088	then
3089	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3090	if [[ $files_for_pes = false ]]
3091	then
3092	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3093	else
3094	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3095	fi
3096	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3097	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3098	echo "then" >> archive_${frelout[$i]}
3099	echo " do_stageout=false" >> archive_${frelout[$i]}
3100	echo "else" >> archive_${frelout[$i]}
3101	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3102	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3103	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3104	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3105	if [[ $files_for_pes = false ]]
3106	then
3107	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3108	else
3109	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3110	fi
3111	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3112	echo "fi" >> archive_${frelout[$i]}
3113	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3114	elif [[ $archive_system = DMF ]]
3115	then
3116	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3117	if [[ $files_for_pes = false ]]
3118	then
3119	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3120	locat=DMF
3121	exit
3122	else
3123	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3124	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3125	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3126	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3127	fi
3128	elif [[ $archive_system = tivoli ]]
3129	then
3130	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3131	if [[ $files_for_pes = false ]]
3132	then
3133	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3134	echo "set -x" >> archive_${frelout[$i]}
3135	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3136	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3137	else
3138
3139	echo "set -x" >> archive_${frelout[$i]}
3140	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3141	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3142	cd $tmp_data_catalog
3143	all_files=`ls -1 ${frelout[$i]}/*`
3144	cd - > /dev/null
3145	(( inode = 0 ))
3146	(( tp1 = tasks_per_node + 1 ))
3147	while (( inode < nodes ))
3148	do
3149	# echo "*** all_files = \"$all_files\" "
3150	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3151	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3152	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3153	# echo "*** files = \"$files\" "
3154	# echo "*** all_files = \"$all_files\" "
3155	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3156	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3157	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3158	(( inode = inode + 1 ))
3159	done
3160	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3161	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3162	fi
3163	elif [[ $archive_system = ut ]]
3164	then
3165	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3166	if [[ $files_for_pes = false ]]
3167	then
3168	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3169	echo "set -x" >> archive_${frelout[$i]}
3170	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3171	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3172	else
3173
3174	echo "set -x" >> archive_${frelout[$i]}
3175	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3176	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3177	cd $tmp_data_catalog
3178	all_files=`ls -1 ${frelout[$i]}/*`
3179	cd - > /dev/null
3180	(( inode = 0 ))
3181	(( tp1 = tasks_per_node + 1 ))
3182	while (( inode < nodes ))
3183	do
3184	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3185	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3186	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3187	(( inode = inode + 1 ))
3188	done
3189	fi
3190	elif [[ $archive_system = none ]]
3191	then
3192	printf " +++ archiving on $localhost not available!\n"
3193	fi
3194
3195	if [[ $archive_system != none ]]
3196	then
3197	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3198	then
3199	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3200	subjob -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3201	elif [[ $localhost = nech ]]
3202	then
3203	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3204	fi
3205	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3206	fi
3207	else
3208	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3209	fi
3210
3211
3212	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3213	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3214	if [[ $files_for_pes = false ]]
3215	then
3216	cat /dev/null > ${pathout[$i]}
3217	else
3218	mkdir -p ${pathout[$i]}
3219	fi
3220
3221	fi
3222
3223
3224	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3225	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3226	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3227	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3228	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3229	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3230	if [[ "${actionout[$i]}" = ar ]]
3231	then
3232	if [[ $files_for_pes = false ]]
3233	then
3234	printf "\n >>> OUTPUT: ${localout[$i]} to"
3235	printf "\n ${pathout[$i]}"
3236	printf "\n File will be copied to archive-system ($archive_system) !\n"
3237	else
3238	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3239	printf "\n ${pathout[$i]}"
3240	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3241	fi
3242	mv ${localout[$i]} ${frelout[$i]}
3243
3244	file_saved=false
3245
3246	if [[ $archive_system = asterix ]]
3247	then
3248	do_stageout=true
3249	(( stageout_anz = 0 ))
3250	while [[ $do_stageout = true ]]
3251	do
3252	if [[ $files_for_pes = false ]]
3253	then
3254	stageout ${frelout[$i]} > STAGE_OUTPUT
3255	else
3256	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3257	fi
3258	cat STAGE_OUTPUT
3259	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3260	then
3261	file_saved=true
3262	do_stageout=false
3263	else
3264	if [[ $files_for_pes = false ]]
3265	then
3266	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3267	else
3268	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3269	fi
3270	(( stageout_anz = stageout_anz + 1 ))
3271	if (( stageout_anz == 10 ))
3272	then
3273	printf "\n +++ stoped after 10 unsuccessful tries!"
3274	archive_save=false
3275	do_stageout=false
3276	else
3277	printf "\n *** new try to store on archive after 15 min:"
3278	sleep 900
3279	fi
3280	fi
3281	done
3282	elif [[ $archive_system = DMF ]]
3283	then
3284	if [[ $files_for_pes = false ]]
3285	then
3286	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3287	locat=DMF
3288	exit
3289	else
3290	rm -rf $ARCHIVE/${frelout[$i]}
3291	cp -r ${frelout[$i]} $ARCHIVE
3292	fi
3293	file_saved=true
3294	elif [[ $archive_system = tivoli ]]
3295	then
3296	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3297	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3298	# GELEGT WERDEN
3299	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3300	chmod g+rx $tmp_data_catalog
3301	if [[ $files_for_pes = false ]]
3302	then
3303	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3304	else
3305	mkdir $tmp_data_catalog/${frelout[$i]}
3306	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3307	fi
3308
3309	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3310	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3311	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3312	if [[ $files_for_pes = false ]]
3313	then
3314	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3315	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3316	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3317	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3318	else
3319	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3320	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3321	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3322	fi
3323
3324	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
3325	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3326	file_saved=true
3327
3328	elif [[ $archive_system = ut ]]
3329	then
3330	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3331	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3332	# GELEGT WERDEN
3333	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3334	chmod g+rx $tmp_data_catalog
3335	if [[ $files_for_pes = false ]]
3336	then
3337	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3338	else
3339	mkdir $tmp_data_catalog/${frelout[$i]}
3340	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3341	fi
3342
3343	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3344	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3345	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3346	if [[ $files_for_pes = false ]]
3347	then
3348	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3349	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3350	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3351	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3352	else
3353	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3354	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3355	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3356	fi
3357
3358	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3359	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3360	file_saved=true
3361
3362	else
3363	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3364	archive_save=false
3365	fi
3366	if [[ $file_saved = true ]]
3367	then
3368	if [[ $files_for_pes = false ]]
3369	then
3370	cat /dev/null > ${pathout[$i]}
3371	else
3372	mkdir -p ${pathout[$i]}
3373	fi
3374	fi
3375	fi
3376
3377	# APPEND AUF LOKALER MASCHINE
3378	if [[ "${actionout[$i]}" = "a" ]]
3379	then
3380	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3381	cat ${localout[$i]} >> ${pathout[$i]}
3382	fi
3383
3384	# KOPIEREN AUF LOKALER MASCHINE
3385	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3386	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3387	then
3388
3389	# KOPIEREN AUF EINPROZESSORMASCHINE
3390	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3391	then
3392	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3393	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3394	else
3395	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3396	cp ${localout[$i]} ${pathout[$i]}
3397	fi
3398
3399	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3400	then
3401
3402	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3403	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3404	# WIRD DANN KOPIERT
3405	# PER MOVE UMBENANNT WERDEN
3406	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3407	cp -r ${localout[$i]} ${pathout[$i]}
3408
3409	fi
3410	fi
3411	done
3412	if (( i != 0 ))
3413	then
3414	if [[ $transfer_problems = true ]]
3415	then
3416	printf "\n$striche\n *** OUTPUT-files saved"
3417	printf "\n +++ WARNING: some data transfers failed! \n"
3418	else
3419	printf "\n$striche\n *** all OUTPUT-files saved \n"
3420	fi
3421	fi
3422
3423
3424	# EVENTUELL FOLGEJOB STARTEN
3425	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
3426	if [[ -f CONTINUE_RUN ]]
3427	then
3428
3429	if [[ $archive_save = true ]]
3430	then
3431
3432	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
3433	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
3434	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
3435	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
3436	# HANDEN
3437	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
3438	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
3439	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
3440	if [[ $(echo $mc \| grep -c "#") != 0 ]]
3441	then
3442	mc=`echo $mc \| sed 's/#/f/g'`
3443	fi
3444
3445
3446	# JOB STARTEN
3447	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
3448	echo " $mc"
3449	printf "\n$striche\n"
3450	if [[ $localhost != $fromhost ]]
3451	then
3452
3453	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
3454	then
3455	echo "*** ssh will be used to initiate restart-runs!"
3456	echo " return_addres=\"$return_addres\" "
3457	echo " return_username=\"$return_username\" "
3458	if [[ $return_addres = 172.20.25.41 ]]
3459	then
3460	# WORKAROUND AUF SCIROCCO AM TIT
3461	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
3462	else
3463	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
3464	fi
3465	else
3466	printf "\n +++ no restart mechanism available for host \"$localhost\" "
3467	locat=restart; exit
3468	fi
3469
3470	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
3471	# DER AKTUELLE JOB ENDET
3472	sleep 30
3473
3474	else
3475
3476	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
3477	# RUFEN WERDEN
3478	cd $LOCAL_PWD
3479	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
3480	cd - > /dev/null
3481	fi
3482	printf "\n$striche\n *** restart-run initiated \n"
3483
3484
3485	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
3486	# GEHOLT WORDEN SIND, LOESCHEN
3487	(( i = 0 ))
3488	while (( i < iin ))
3489	do
3490	(( i = i + 1 ))
3491	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
3492	then
3493	rm -r $tmp_data_catalog/${frelin[$i]}
3494	fi
3495	done
3496
3497	else
3498
3499	printf "\n +++ no restart-run possible, since errors occured"
3500	printf "\n during the archive process"
3501	fi
3502
3503	fi
3504
3505
3506
3507	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
3508	if [[ "$email_notification" != "" ]]
3509	then
3510
3511	if [[ $localhost != $fromhost ]]
3512	then
3513	if [[ -f CONTINUE_RUN ]]
3514	then
3515	echo "PALM restart run necessary" > email_text
3516	echo "description header of actual run:" >> email_text
3517	cat CONTINUE_RUN >> email_text
3518	echo "mrun-command to restart:" >> email_text
3519	echo "$mc" >> email_text
3520	else
3521	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
3522	fi
3523	mail $email_notification < email_text
3524	printf "\n *** email notification sent to \"$email_notification\" "
3525	fi
3526	fi
3527
3528
3529
3530	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
3531	cd $HOME
3532	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
3533
3534	else
3535
3536
3537	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
3538	# CHENDE AKTIONEN DURCHGEFUEHRT
3539
3540	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
3541	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
3542	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
3543	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
3544	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
3545	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
3546	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
3547	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
3548	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
3549	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
3550	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
3551	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
3552	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
3553	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
3554	if [[ $use_openmp = true ]]
3555	then
3556	mrun_com=${mrun_com}" -O"
3557	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
3558	else
3559	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
3560	fi
3561	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
3562	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
3563	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
3564	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
3565	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
3566	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
3567	if [[ $do_remote = true ]]
3568	then
3569	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
3570	fi
3571
3572
3573	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
3574	jobfile=jobfile.$RANDOM
3575
3576
3577	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
3578	echo "mkdir $TEMPDIR" >> $jobfile
3579	echo "cd $TEMPDIR" >> $jobfile
3580
3581
3582	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
3583	if [[ $do_trace = true ]]
3584	then
3585	echo "set -x" >> $jobfile
3586	else
3587	echo "set +vx" >> $jobfile
3588	fi
3589
3590
3591	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
3592	# SOWIE GEGEBENENFALLS DES MAKEFILES
3593	if [[ $do_compile = true ]]
3594	then
3595
3596	source_catalog=SOURCES_FOR_RUN_$fname
3597
3598	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
3599	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
3600	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
3601	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
3602	echo "export SOURCES_COMPLETE=true" >> $jobfile
3603	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
3604
3605	for filename in $source_list
3606	do
3607	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3608	echo "cat > $filename << \"%END%\"" >> $jobfile
3609	cat $source_catalog/$filename >> $jobfile
3610	echo " " >> $jobfile
3611	echo "%END%" >> $jobfile
3612	echo " " >> $jobfile
3613	done
3614
3615	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3616	echo "cat > Makefile << \"%END%\"" >> $jobfile
3617	cat $source_catalog/Makefile >> $jobfile
3618	echo " " >> $jobfile
3619	echo "%END%" >> $jobfile
3620	echo " " >> $jobfile
3621
3622	echo "cd - > /dev/null" >> $jobfile
3623
3624	fi
3625
3626
3627	# ABSPEICHERN DER KONFIGURATIONSDATEI
3628	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3629	echo "cat > $config_file << \"%END%\"" >> $jobfile
3630	cat $config_file >> $jobfile
3631	echo "%END%" >> $jobfile
3632	echo " " >> $jobfile
3633
3634
3635	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
3636	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
3637	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
3638	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
3639	echo "%END%" >> $jobfile
3640	if [[ $host = lctit ]]
3641	then
3642	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
3643	echo "mv mrun_new $mrun_script_name" >> $jobfile
3644	fi
3645	echo "chmod u+x $mrun_script_name" >> $jobfile
3646	echo "execute_mrun=true" >> $jobfile
3647	echo " " >> $jobfile
3648
3649	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
3650	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
3651	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
3652	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
3653	if [[ $do_remote = true ]]
3654	then
3655	(( i = 0 ))
3656	while (( i < iin ))
3657	do
3658	(( i = i + 1 ))
3659	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
3660	if [[ "${transin[$i]}" = job ]]
3661	then
3662	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
3663	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
3664	echo " " >> $jobfile
3665	echo "%END%" >> $jobfile
3666	else
3667	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
3668	fi
3669
3670	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
3671	echo "if [[ \$? = 1 ]]" >> $jobfile
3672	echo "then" >> $jobfile
3673	echo " echo \" \" " >> $jobfile
3674	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
3675	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
3676	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
3677	echo " execute_mrun=false" >> $jobfile
3678	echo "fi" >> $jobfile
3679	done
3680	fi
3681
3682	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
3683	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
3684	echo "LOCAL_PWD=$working_directory" >> $jobfile
3685	echo "export LOCAL_PWD" >> $jobfile
3686
3687	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
3688	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
3689	echo "export LOCAL_MRUN_PATH" >> $jobfile
3690
3691	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
3692	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
3693	then
3694	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
3695	fi
3696
3697	# MRUN AUF ZIELRECHNER AUFRUFEN
3698	echo "set -x" >> $jobfile
3699	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
3700
3701	echo 'ls -al; echo `pwd`' >> $jobfile
3702	echo "cd \$HOME" >> $jobfile
3703	echo "rm -rf $TEMPDIR" >> $jobfile
3704
3705
3706
3707
3708	# JOB PER SUBJOB STARTEN
3709	if [[ $silent = false ]]
3710	then
3711	printf "\n "
3712	else
3713	printf "\n\n"
3714	fi
3715
3716	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v $jobfile
3717	rm -rf $jobfile
3718
3719
3720	fi # ENDE REMOTE-TEIL
3721
3722
3723
3724	# ENDE DER PROZEDUR

Note: See TracBrowser for help on using the repository browser.

Download in other formats:

| Impressum | ©Leibniz Universität Hannover |