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source: palm/trunk/SCRIPTS/mrun @ 374

Last change on this file since 374 was 374, checked in by raasch, 15 years ago
mrun adjustments for ice2 and for ssh calls of restart jobs
Property svn:keywords set to `Id Rev`
File size: 166.0 KB

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1	#!/bin/ksh
2	# mrun - Plot-Shellskript
3	# $Id: mrun 374 2009-08-28 10:50:21Z raasch $
4
5	# Prozedur zum Starten von Modellaeufen
6
7	# letzte Aenderung:
8	# 03/03/94 - Siggi - Entwicklungsbeginn
9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
11	# zelne Variable exportiert. Dies ist noetig, weil an-
12	# sonsten irgendein Speicher ueberlaeuft und von mrun
13	# aufgerufene Programme (z.B. stageout) mit Fehlern
14	# abbrechen (too many arguments)
15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
16	# defaultmaessig im RRZN-Profile eingeschaltet
17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
18	# wegfallen
19	# 25/04/00 - Siggi - Version 1.5
20	# remote_addres und remote_user in return_addres bzw.
21	# return_username umbenannt, return_username wird dem
22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
23	# Neue Variable remote_username, die beim interaktiven
24	# mrun-Aufruf zwingend ueber die neue Option -u oder
25	# in der Konfigurationsdatei angegeben werden muss.
26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
27	# Version 1.7
28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
31	# zu bestimmen; Praeprozessoroptionen haben nun alle
32	# die Form -Dtext=text, weil auf IBM sonst text durch
33	# die leere Zeichenkette ersetzt wird
34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
36	# (-D$OMP=OMP) in order to avoid problems with
37	# OMP_NUM_THREADS
38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
39	# tar files, one for each node used
40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
42	# 17/01/05 - Siggi - job for data transfer to local machine now within
43	# job class c1 (HLRN)
44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
46	# base filename and cycle number
47	# 16/02/05 - Gerald - hababai validated
48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
49	# 29/03/05 - Marcus - berni*-en0 validated
50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
51	# 24/04/05 - Siggi - netcdf support on lcmuk
52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
54	# number) can now be used within interactive runs
55	# 12/05/05 - Siggi - netcdf support on ibm
56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
57	# 18/05/05 - Siggi - netcdf support on nec
58	# 24/05/05 - Siggi - netcdf support on ibms
59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
60	# to 30 seconds
61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
62	# PATH is temporarily set)
63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
64	# caused warnings in the job protocol
65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
67	# removed
68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
69	# realized by file attribute trpe
70	# 28/10/05 - Siggi - if existing, the file extension is output in case
71	# of missing input file - no job abort in case of
72	# missing input files with file extensions
73	# (preliminary solution)
74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
76	# 07/12/05 - Siggi - gallego and elephanta admitted
77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
79	# 20/01/06 - Siggi - cpp directive for ibmy
80	# 09/02/06 - Siggi - ibmy admitted for batch mode
81	# 13/04/06 - Siggi - ostria admitted
82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
84	# optimization of OpenMP runs (option stacksize is
85	# necessary for large gridpoint numbers because
86	# otherwise a segmentation fault occurs)
87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
90	# 20/09/06 - Marcus - add DVRP library on nech
91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
92	# on local NAMELIST file ENVPAR
93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
95	# 06/02/07 - Siggi - add DVRP library on lcmuk
96	# 07/02/07 - Siggi - revision of source code handling, source code is
97	# now expected in directory given by source_path and
98	# not in the current working directory, source code
99	# files provided in add_source_path are allways
100	# compiled, source code to be compiled is allways
101	# sampled in SOURCES_FOR_RUN_$fname which is a
102	# subdirectory of the current working directory,
103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
104	# adapted for RIAM (neck)
105	# bugfix for cycle number of output file (extout)
106	# all hpmuk-related code removed
107	# 14/02/07 - Siggi - dvrp support for neck added
108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
109	# mrun_path replaced by PALM_BIN,
110	# all machines are calling interpret_config.x
111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
112	# output
113	# 16/03/07 - Siggi - adjustments for lctit
114	# 29/03/07 - Siggi - global revision transfered to batch job by new
115	# option -G
116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
117	# + netcdf/dvrp-options are read from configuration
118	# file, host identifier (local_host) is read from
119	# config file, code related to ftp filetransfer
120	# removed (incl. option -f)
121	# 19/06/07 - Siggi - time limit for cdata jobs increased
122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
123	# if new option -Y (coupling) is given,
124	# output of executables to aout_output removed,
125	# messages are immediately written to stdout instead
126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
128	# variables out to the nodes in coupled mode -disabled-
129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
131	# environment variables out to the nodes in coupled mode
132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
133	# suggestions
134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
135	# argument -g group_number, admit all sla* node_usage
136	# queues
137	# 30/10/07 - Marcus - further adjustments for queues on lctit
138	# 14/02/08 - Bjoern - link of restart files with long file name possible
139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
140	# true, mrun tries "ln -f" on local output and resorts
141	# to "cp" or "cp -r" on error
142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
143	# which allows the user to choose his own job catalog
144	# by setting job_catalog in the configuration file
145	# (default is ~/job_queue),
146	# workaround for mpiexec with -env option,
147	# adjustments for lcxt4 (Bergen Center for Computational
148	# Science)
149	# 22/05/08 - Marcus - If environment variable link_local_input is set to
150	# true, mrun tries "ln -f" on local input and resorts
151	# to "cp" or "cp -r" on error
152	# 27/05/08 - Siggi - PATH is set to PALM_BIN everywhere (missing so far)
153	# 14/07/08 - Siggi - adjustments for lcsgih
154	# 08/08/08 - Marcus - typo removed in lcxt4 branch
155	# 17/09/08 - Siggi - restart mechanism adjusted for lcsgi
156	# 02/10/08 - BjornM - argument "-Y" modified, adjustments for coupled runs
157	# 21/10/08 - Siggi - bugfix for the case that -K has more than one
158	# argument
159	# 08/11/08 - Siggi - bugfix for depository path settings in configuration
160	# file
161	# 11/11/08 - Siggi - rules for using user code files changed: user
162	# code splitted into one file per subroutine,
163	# user can provide his/her own makefile, only
164	# default source-code filenames are allowed
165	# 14/11/08 - Siggi - cond1 and cond2 are part of the depository name
166	# 08/01/09 - Siggi - mpi module on sgi machines to be used can be set
167	# with environment variable mpilib
168	# 13/01/09 - Siggi - totalview on hice/bice can be used in debug mode
169	# using environment variable totalview
170	# 25/02/09 - Siggi - cputime-option (-t) is allowed to be omitted for
171	# interactive runs
172	# 05/03/09 - Siggi - adjustments for new NEC-SX9 at RIAM (necriam)
173	# 16/03/09 - Siggi - dvrp_lib, dvrp_inc replaced by dvr_lib, dvr_inc,
174	# dvr streaming server is automatically started using
175	# new variable dvr_server and a configuration file
176	# .dvrserver.config,
177	# processing of dvr output files using new script
178	# process_dvr_output implemented, in order to make
179	# dvr application more user friendly
180	# 20/03/09 - Marcus - update of n1ge command for lctit
181	# 16/04/09 - Siggi - new option -y for precursor (uncoupled) ocean runs
182	# to be followed by a coupled atmosphere-ocean run
183	# 21/04/09 - Siggi - adjustments for new IBM at DKRZ, which is now ibmh
184	# 24/06/09 - BjornM - adjustments for coupled/precursor runs on ibmy
185	# 08/07/09 - Siggi - default value for email_notification is none,
186	# option -e added to subjob
187	# 19/08/09 - Marcus - MPI debug option
188	# 21/08/09 - Marcus - totalview on hice/bice also available for mvapich2
189	# 25/08/09 - BjornM - adpated for lck
190	# 26/08/09 - Siggi - additional environment variables for mpt on ice2
191	# 26/08/09 - Marcus - adjustment for ice2 on lcsgib
192
193
194	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
195
196	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
197	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
198	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
199
200	AddFilenames=""
201	additional_conditions=""
202	add_source_path=""
203	afname=""
204	archive_save=true
205	archive_system=none
206	compiler_name=""
207	cond1=""
208	cond2=""
209	config_file=.mrun.config
210	coupled_dist=""
211	coupled_mode="mpi1"
212	cpp_opts=""
213	cpp_options=""
214	cpumax=0
215	cpurest=0
216	delete_temporary_catalog=true
217	do_batch=false
218	do_compile=true
219	do_remote=false
220	do_stagein=true
221	do_stageout=true
222	do_trace=false
223	email_notification="none"
224	exclude=""
225	executable=""
226	execution_error=false
227	fimm=false
228	fname=test
229	fromhost=""
230	global_revision=""
231	group_number=none
232	host=""
233	host_file=""
234	hp=""
235	ignore_archive_error=false
236	input_list=""
237	interpreted_config_file=""
238	job_catalog="~/job_queue"
239	job_on_file=""
240	keep_data_from_previous_run=false
241	link_local_input=false
242	link_local_output=false
243	localhost_realname=$(hostname)
244	local_compile=false
245	local_dvrserver_running=.FALSE.
246	locat=normal
247	mainprog=""
248	makefile=""
249	mc=$0
250	while [[ $(echo $mc \| grep -c "/") != 0 ]]
251	do
252	mc=`echo $mc \| cut -f2- -d"/"`
253	done
254	module_files=""
255	mrun_script_name=$mc
256	netcdf_inc=""
257	netcdf_lib=""
258	netcdf_support=false
259	node_usage=default
260	numprocs=""
261	numprocs_atmos=0
262	numprocs_ocean=0
263	OOPT=""
264	openmp=false
265	output_list=""
266	package_list=""
267	punkte="..........................................................."
268	queue=none
269	read_from_config=""
270	restart_run=false
271	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
272	if [[ $return_addres = 130.75.105.158 ]]
273	then
274	return_addres=172.20.25.41
275	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
276	fi
277	return_password=""
278	return_username=$LOGNAME
279	remotecall=false
280	remote_username=""
281	run_coupled_model=false
282	run_mode=""
283	scirocco=false
284	store_on_archive_system=true
285	striche=" ----------------------------------------------------------------------------"
286	silent=false
287	source_list=""
288	source_path=SOURCE
289	tasks_per_node=""
290	threads_per_task=1
291	tmpcreate=false
292	tmp_data_catalog=""
293	transfer_problems=false
294	usern=$LOGNAME
295	working_directory=`pwd`
296	TOPT=""
297	XOPT=""
298	zeit=$( date \| cut -c 12-19 )
299
300	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
301	typeset -i cputime i ii iia iii iio icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
302
303	typeset -R30 calltime
304	typeset -L20 spalte1
305	typeset -L40 spalte2
306	typeset -L60 spalte3
307	typeset -L35 string1=`date`
308	typeset -L12 string2=$usern
309	typeset -L12 string3=$localhost_realname
310	typeset -L12 string4
311	typeset -L12 string5
312	typeset -L30 version="MRUN 2.0 Rev$Rev: 374 $"
313
314
315
316	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
317	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
318
319	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
320	# EXPORTIERT WERDEN
321	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
322	export group_number input_list memory numprocs output_list queue run_mode
323
324
325
326	# FEHLERBEHANDLUNG
327	# BEI EXIT:
328	trap 'rm -rf $working_directory/tmp_mrun
329	if [[ $locat != localhost ]]
330	then
331	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
332	# then
333	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
334	#MRUN-calls on $localhost
335	#
336	#date and time user localhost remotehost termination mrun-command
337	#--------------------------------------------------------------------------------------------------------------------
338	#%STATEND%
339	# chmod 666 ${mrun_path}/statistik/mrun_statistik
340	# fi
341	#
342	# # EINTRAG IN DIE STATISTIK-DATEI
343	# string4=$host
344	# string5=$locat
345	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
346	# then
347	# if [[ $do_batch = true ]]
348	# then
349	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
350	# else
351	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
352	# fi
353	# fi
354	echo " " > /dev/null
355	fi
356
357	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
358	then
359
360	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
361	(( i = 0 ))
362	while (( i < iec ))
363	do
364	(( i = i + 1 ))
365	printf "\n *** Execution of ERROR-command:\n"
366	printf " >>> ${err_command[$i]}\n"
367	eval ${err_command[$i]}
368	done
369	if [[ -n $interpreted_config_file ]] then
370	rm -rf $interpreted_config_file
371	fi
372	if [[ -n .mrun_environment ]] then
373	rm -rf .mrun_environment
374	fi
375	if [[ $tmpcreate = true ]]
376	then
377	printf "\n *** Contents of \"$TEMPDIR\":\n"
378	ls -al; cd
379	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
380	fi
381	if [[ "$dvrserver_id" != "" ]]
382	then
383	echo "+++ killing dvrserver_id=$dvrserver_id"
384	kill $dvrserver_id
385	fi
386	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
387	then
388	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
389	fi
390	printf "\n\n+++ MRUN killed \n\n"
391	elif [[ $locat != control_c ]]
392	then
393	printf "\n\n --> all actions finished\n\n"
394	printf " Bye, bye $usern !!\n\n"
395	fi' exit
396
397
398	# BEI TERMINAL-BREAK:
399	trap 'rm -rf $working_directory/tmp_mrun
400	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
401	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
402	then
403	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
404	fi
405	if [[ "$dvrserver_id" != "" ]]
406	then
407	echo "+++ killing dvrserver_id=$dvrserver_id"
408	kill $dvrserver_id
409	fi
410	printf "\n+++ MRUN killed by \"^C\" \n\n"
411	locat=control_c
412	exit
413	' 2
414
415
416	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
417	# BEEN SET
418	if [[ "$PALM_BIN" = "" ]]
419	then
420	printf "\n +++ environment variable PALM_BIN has not been set"
421	printf "\n please set it to the directory where the PALM scripts are located"
422	locat=palm_bin; exit
423	fi
424	export PATH=$PALM_BIN:$PATH
425
426
427
428	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
429	# FUER FOLGEJOBS BENOETIGT WIRD
430	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:yY: option
431	do
432	case $option in
433	(a) afname=$OPTARG;;
434	(A) store_on_archive_system=false; mc="$mc -A";;
435	(b) do_batch=true; mc="$mc -b";;
436	(B) delete_temporary_catalog=false; mc="$mc -B";;
437	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
438	(C) restart_run=true; mc="$mc -C";;
439	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
440	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D'$OPTARG'";;
441	(F) job_on_file="-D"; mc="$mc -F";;
442	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
443	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
444	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
445	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
446	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
447	(I) ignore_archive_error=true; mc="$mc -I";;
448	(k) keep_data_from_previous_run=true; mc="$mc -k";;
449	(K) additional_conditions="$OPTARG"; mc="$mc -K'$OPTARG'";;
450	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
451	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
452	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
453	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
454	(O) use_openmp=true; mc="$mc -O";;
455	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
456	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
457	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
458	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
459	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
460	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
461	(S) read_from_config=false; mc="$mc -S";;
462	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
463	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
464	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
465	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
466	(v) silent=true; mc="$mc -v";;
467	(x) do_trace=true;set -x; mc="$mc -x";;
468	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
469	(y) ocean_file_appendix=true; mc="$mc -y";;
470	(Y) run_coupled_model=true; coupled_dist=$OPTARG; mc="$mc -Y'$OPTARG'";;
471	(\?) printf "\n +++ unknown option $OPTARG \n"
472	printf "\n --> type \"$0 ?\" for available options \n"
473	locat=parameter;exit;;
474	esac
475	done
476
477
478	# EVTL. POSITIONSPARAMETER EINLESEN
479	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
480	shift OPTIND-1
481
482
483	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
484	if [[ "$1" = "?" ]]
485	then
486	(printf "\n *** mrun can be called as follows:\n"
487	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. -y -Y.. <modus>\n"
488	printf "\n Description of available options:\n"
489	printf "\n Option Description Default-Value"
490	printf "\n -a base name of input files equiv. -d"
491	printf "\n -A no archiving when using file-attribute fl"
492	printf "\n -b batch-job on local machine ---"
493	printf "\n -B do not delete temporary directory at end ---"
494	printf "\n -c configuration file .mrun.config"
495	printf "\n -d base name of files attached to program test"
496	printf "\n -D preprocessor(cpp)-directives \"\" "
497	printf "\n -F create remote job file only ---"
498	printf "\n -h execution host $localhost_realname"
499	printf "\n -i INPUT control list \"\" "
500	printf "\n -I archiving errors of previous batch-jobs"
501	printf "\n will be ignored"
502	printf "\n -k keep data from previous run"
503	printf "\n -K additional conditions for controling"
504	printf "\n usage of conditional code and"
505	printf "\n env-variables in configuration file \"\" "
506	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
507	printf "\n -M Makefile name Makefile"
508	printf "\n -n node usage (shared/not_shared) depending on -h"
509	printf "\n -o OUTPUT control list \"\" "
510	printf "\n -O use OpenMP ---"
511	printf "\n -p software package list \"\" "
512	printf "\n -q queue \"$queue\" "
513	printf "\n -r run control list (combines -i -o) \"\" "
514	printf "\n -s filenames of routines to be compiled \"\" "
515	printf "\n must end with .f, .f90, .F, or .c !"
516	printf "\n use \"..\" for more than one file and wildcards"
517	printf "\n -s TEST compiles all files with w-permit"
518	printf "\n -S config file interpreted by shellscript ---"
519	printf "\n -t allowed cpu-time in seconds (batch) 0"
520	printf "\n -T tasks per node depending on -h"
521	printf "\n -u username on remote machine \"\" "
522	printf "\n -v no prompt for confirmation ---"
523	printf "\n -x tracing of mrun for debug purposes ---"
524	printf "\n -X # of processors (on parallel machines) 1"
525	printf "\n -y add appendix \"_O\" to all local output"
526	printf "\n files (ocean precursor runs followed by"
527	printf "\n coupled atmosphere-ocean runs) ---"
528	printf "\n -Y run coupled model, \"#1 #2\" with"
529	printf "\n #1 atmosphere and #2 ocean processors \"#/2 #/2\" depending on -X"
530	printf "\n "
531	printf "\n Possible values of positional parameter <modus>:"
532	printf "\n \"?\" - this outline \n\n") \| more
533	exit
534	elif [[ "$1" != "" ]]
535	then
536	printf "\n +++ positional parameter $1 unknown \n"
537	locat=parameter; exit
538	fi
539
540
541
542	# KURZE STARTMELDUNG
543	printf "\n*** $version "
544	printf "\n will be executed. Please wait ..."
545
546
547
548	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
549	if [[ ! -f $config_file ]]
550	then
551	printf "\n\n +++ configuration file: "
552	printf "\n $config_file"
553	printf "\n does not exist"
554	locat=connect; exit
555	fi
556
557
558	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
559	line=""
560	grep "%host_identifier" $config_file > tmp_mrun
561	while read line
562	do
563	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
564	then
565	HOSTNAME=`echo $line \| cut -d" " -s -f2`
566	host_identifier=`echo $line \| cut -d" " -s -f3`
567	if [[ $localhost_realname = $HOSTNAME ]]
568	then
569	localhost=$host_identifier
570	break
571	fi
572	fi
573	done < tmp_mrun
574
575	if [[ "$localhost" = "" ]]
576	then
577	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
578	printf "\n for local host \"$localhost_realname\"."
579	printf "\n Please add line"
580	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
581	printf "\n to the configuration file."
582	locat=localhost; exit
583	fi
584
585
586	# HOSTSPEZIFISCHE VARIABLEN SETZEN
587	case $localhost_realname in
588	(breg-en0\|berni-en0) archive_system=tivoli;;
589	(cs*) archive_system=ut;;
590	(fimm.bccs.uib.no) fimm=true;;
591	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
592	(hreg-en0\|hanni-en0) archive_system=tivoli;;
593	(scirocco) scirocco=true;;
594	esac
595
596
597
598	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
599	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
600	[[ "$afname" = "" ]] && afname=$fname
601
602
603	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
604	if [[ "$run_mode" != "" ]]
605	then
606	input_list="$input_list $run_mode"
607	output_list="$output_list $run_mode"
608	fi
609
610
611	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
612	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
613	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
614	# STARTET)
615	if [[ "$fromhost" = "" ]]
616	then
617	fromhost=$localhost
618	fi
619
620
621	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
622	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
623	then
624	source_list=TEST
625	local_compile=true
626	host=$localhost
627	fi
628
629
630	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
631	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
632	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
633	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
634	if [[ -n $host && "$host" != $localhost ]]
635	then
636	do_batch=true
637	do_remote=true
638	case $host in
639	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|necriam\|lcsgib\|lcsgih\|lctit\|unics\|lcxt4\|lck) true;;
640	(*) printf "\n"
641	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
642	printf "\n is not available"
643	locat=nqs; (( iec = 0 )); exit;;
644	esac
645	else
646	host=$localhost
647	fi
648
649
650	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
651	if [[ -n $additional_conditions ]]
652	then
653	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
654	cond1=`echo $additional_conditions \| cut -d" " -f1`
655	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
656	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
657	if [[ -n $dummy ]]
658	then
659	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
660	locat=options; exit
661	fi
662	fi
663
664
665	# KOPPLUNGSEIGENSCHAFTEN (-Y) AUSWERTEN UND coupled_mode BESTIMMEN
666	if [[ $run_coupled_model = true ]]
667	then
668
669	if [[ -n $coupled_dist ]]
670	then
671
672	numprocs_atmos=`echo $coupled_dist \| cut -d" " -s -f1`
673	numprocs_ocean=`echo $coupled_dist \| cut -d" " -s -f2`
674
675	if (( $numprocs_ocean + $numprocs_atmos != $numprocs ))
676	then
677
678	printf "\n +++ number of processors does not fit to specification by \"-Y\"."
679	printf "\n PEs (total) : $numprocs"
680	printf "\n PEs (atmosphere): $numprocs_atmos"
681	printf "\n PEs (ocean) : $numprocs_ocean"
682	locat=coupling; exit
683
684	# REARRANGING BECAUSE CURRENTLY ONLY 1:1 TOPOLOGIES ARE SUPPORTED
685	# THIS SHOULD BE REMOVED IN FUTURE
686	elif (( $numprocs_ocean != $numprocs_atmos ))
687	then
688
689	printf "\n +++ currently only 1:1 topologies are supported"
690	printf "\n PEs (total) : $numprocs"
691	printf "\n PEs (atmosphere): $numprocs_atmos"
692	printf "\n PEs (ocean) : $numprocs_ocean"
693	(( numprocs_atmos = $numprocs / 2 ))
694	(( numprocs_ocean = $numprocs / 2 ))
695	printf "\n +++ rearranged topology to $numprocs_atmos:$numprocs_ocean"
696
697	fi
698
699	else
700
701	(( numprocs_ocean = $numprocs / 2 ))
702	(( numprocs_atmos = $numprocs / 2 ))
703
704	fi
705	coupled_dist=`echo "$numprocs_atmos $numprocs_ocean"`
706
707	# GET coupled_mode FROM THE CONFIG FILE
708	line=""
709	grep "%cpp_options.-D__mpi2.$host" $config_file > tmp_mrun
710	while read line
711	do
712	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" && ( $(echo $line \| cut -d" " -s -f4) = $cond1 \|\| $(echo $line \| cut -d" " -s -f4) = $cond2 ) ]]
713	then
714	coupled_mode="mpi2"
715	fi
716	done < tmp_mrun
717
718	fi
719
720
721	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
722	# ARCHIVIERUNG FEHLGESCHLAGEN IST
723	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
724	then
725	if [[ $ignore_archive_error = false ]]
726	then
727	printf "\n +++ data archiving of previous run failed"
728	printf "\n see directory \~/job_queue on remote machine"
729	locat=archive; exit
730	else
731	printf "\n +++ warning: data archiving in a previous run failed"
732	printf "\n MRUN continues, trying to get backup copy"
733	fi
734	fi
735
736
737
738	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
739	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
740	if [[ "$read_from_config" = false ]]
741	then
742
743	[[ $silent = false ]] && printf "\n Reading the configuration file... "
744	while read zeile
745	do
746	[[ $silent = false ]] && printf "."
747
748
749	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
750	# ERSETZEN
751	eval zeile=\"$zeile\"
752
753
754	# INTERPRETATION DER ZEILE
755	if [[ "$(echo $zeile)" = "" ]]
756	then
757	# LEERZEILE, KEINE AKTION
758	continue
759
760	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
761	then
762
763	# ZEILE IST KOMMENTARZEILE
764	true
765
766	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
767	then
768
769	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
770	zeile=$(echo $zeile \| cut -c2-)
771	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
772	var=`echo $zeile \| cut -d" " -f1`
773	value=`echo $zeile \| cut -d" " -s -f2`
774	for_host=`echo $zeile \| cut -d" " -s -f3`
775	for_cond1=`echo $zeile \| cut -d" " -s -f4`
776	for_cond2=`echo $zeile \| cut -d" " -s -f5`
777
778	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
779	then
780
781	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
782	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
783	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
784
785
786	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
787	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
788	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
789	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
790	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
791	# KONFIGURATIONSDATEI
792	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
793	then
794	eval $var=\$value
795
796	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
797	if [[ $do_trace = true ]]
798	then
799	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
800	fi
801	fi
802
803	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
804	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
805	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
806	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
807	if [[ $var = host ]]
808	then
809	if [[ -n $host && "$host" != $localhost ]]
810	then
811	do_batch=true
812	do_remote=true
813	case $host in
814	(ibm\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4\|lck) true;;
815	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
816	printf "\n is not available"
817	locat=nqs; exit;;
818	esac
819	else
820	host=$localhost
821	fi
822	fi
823
824	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
825	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
826	# DEN PROGRAMMEN BENOETIGT WERDEN
827	export $var
828	fi
829
830
831
832
833	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
834	then
835
836	# ZEILE DEFINIERT ERROR-KOMMANDO
837	(( iec = iec + 1 ))
838	zeile=$(echo $zeile \| cut -c4-)
839	err_command[$iec]="$zeile"
840
841	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
842	then
843
844	# ZEILE DEFINIERT INPUT-KOMMANDO
845	(( iic = iic + 1 ))
846	zeile=$(echo $zeile \| cut -c4-)
847	in_command[$iic]="$zeile"
848
849	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
850	then
851
852	# ZEILE DEFINIERT OUTPUT-KOMMANDO
853	(( ioc = ioc + 1 ))
854	zeile=$(echo $zeile \| cut -c4-)
855	out_command[$ioc]="$zeile"
856
857	else
858
859	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
860	# s2a: in/out - Feld
861	# s2b: loc - Feld (optional)
862	# s2c: tr/ar - Feld (optional)
863	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
864	s1=`echo $zeile \| cut -d" " -f1`
865	s2=`echo $zeile \| cut -d" " -s -f2`
866	s2a=$(echo $s2 \| cut -d":" -f1)
867	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
868	then
869	s2b=""
870	s2c=""
871	else
872	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
873	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
874	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
875	fi
876	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
877	s3=`echo $zeile \| cut -d" " -f3`
878	s4=`echo $zeile \| cut -d" " -s -f4`
879	s5=`echo $zeile \| cut -d" " -s -f5`
880	s6=`echo $zeile \| cut -d" " -s -f6`
881
882
883	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
884	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
885	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
886	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
887	# HANDEN SEIN MUSS (D.H. s2b = loc)
888	IFSALT="$IFS"; IFS="$IFS:"
889	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
890	then
891	found=false
892	for actual in $input_list
893	do
894	for formal in $s3
895	do
896	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
897	done
898	done
899	if [[ $found = true ]]
900	then
901	(( iin = iin + 1 ))
902	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
903	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
904	extin[$iin]=$s6
905	fi
906	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
907	then
908	found=false
909	for actual in $output_list
910	do
911	for formal in $s3
912	do
913	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
914	done
915	done
916	if [[ $found = true ]]
917	then
918	(( iout = iout + 1 ))
919	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
920	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
921	fi
922	elif [[ "$s2a" != in && "$s2a" != out ]]
923	then
924	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
925	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
926	locat=connect; exit
927	fi
928	IFS="$IFSALT"
929	fi
930	done < $config_file
931
932	else
933
934
935	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
936	[[ $silent = false ]] && printf "..."
937	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
938	export interpreted_config_file=.icf.$RANDOM
939
940
941
942	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
943	# VERFUEGUNG STELLEN
944	cat > .mrun_environment << %%END%%
945	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
946	config_file = '$config_file', do_remote = '$do_remote',
947	do_trace = '$do_trace', host = '$host',
948	input_list = '$input_list', icf = '$interpreted_config_file',
949	localhost = '$localhost', output_list = '$output_list' /
950
951	%%END%%
952
953	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
954	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
955	mrun_memory=$memory
956	mrun_group_number=$group_number
957	mrun_cpumax=$cpumax
958	mrun_numprocs=$numprocs
959
960	if [[ $localhost_realname = "sx-fep" ]]
961	then
962	/home/COAR/NC/raasch/pub/interpret_config_necriam.x
963	else
964	interpret_config.x
965	fi
966	rm .mrun_environment
967
968
969	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
970	chmod u+x $interpreted_config_file
971	export PATH=$PATH:.
972	. $interpreted_config_file
973	rm $interpreted_config_file
974
975
976	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
977	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
978	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
979	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
980	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
981
982	fi
983
984
985	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
986	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
987	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
988	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
989	if [[ "$SOURCES_COMPLETE" = "" ]]
990	then
991
992	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
993	# VEREINBART WURDE
994	source_path=""
995	line=""
996	grep "%source_path" $config_file > tmp_mrun
997	while read line
998	do
999	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
1000	then
1001	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
1002	then
1003	global_source_path=`echo $line \| cut -d" " -f2`
1004	fi
1005	fi
1006	done < tmp_mrun
1007
1008	line=""
1009	found=false
1010	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
1011	while read line
1012	do
1013	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
1014	then
1015	if [[ $found = true ]]
1016	then
1017	printf "\n\n +++ more than one source path found in configuration file"
1018	printf "\n for local host \"$localhost\" "
1019	locat=source_path; exit
1020	fi
1021	source_path=`echo $line \| cut -d" " -f2`
1022	found=true
1023	fi
1024	done < tmp_mrun
1025	rm tmp_mrun
1026
1027	if [[ "$source_path" = "" ]]
1028	then
1029	if [[ "$global_source_path" != "" ]]
1030	then
1031	source_path=$global_source_path
1032	else
1033	printf "\n\n +++ no source path found in configuration file"
1034	printf "\n for local host \"$localhost\" "
1035	locat=source_path; exit
1036	fi
1037	fi
1038	eval source_path=$source_path
1039
1040	if [[ ! -d $source_path ]]
1041	then
1042	printf "\n\n +++ source path \"$source_path\" on local host"
1043	printf "\n \"$localhost\" does not exist"
1044	locat=source_path; exit
1045	fi
1046
1047	fi
1048
1049
1050	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
1051	# DURCH OPTION -G MITGETEILT)
1052	if [[ "$global_revision" = "" ]]
1053	then
1054	global_revision=`svnversion $source_path 2>/dev/null`
1055	global_revision="Rev: $global_revision"
1056	fi
1057
1058
1059	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
1060	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
1061	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
1062	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
1063	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
1064	if [[ -n $host && "$host" != $localhost ]]
1065	then
1066	do_batch=true
1067	do_remote=true
1068	case $host in
1069	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lcsgib\|lcsgih\|lctit\|nech\|necriam\|unics\|lcxt4\|lck) true;;
1070	(*) printf "\n"
1071	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
1072	printf "\n is not available"
1073	locat=nqs; (( iec = 0 )); exit;;
1074	esac
1075	else
1076	host=$localhost
1077	fi
1078
1079
1080	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
1081	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
1082	then
1083
1084	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
1085	if [[ ! -n $numprocs ]]
1086	then
1087	printf "\n"
1088	printf "\n +++ option \"-K parallel\" requires additional specification"
1089	printf "\n of the number of processors to be used by"
1090	printf "\n mrun-option \"-X\" or by environment-variable"
1091	printf "\n \"numprocs\" in the configuration file"
1092	locat=numprocs; (( iec = 0 )); exit
1093	fi
1094
1095	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
1096	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
1097	# GESAMTPROZESSORANZAHL IST
1098	if [[ $host = nech \|\| $host = necriam \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
1099	then
1100	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
1101	(( ival = $tasks_per_node ))
1102	(( pes = numprocs ))
1103	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
1104	# then
1105	# (( pes = pes - 1 ))
1106	# fi
1107	(( ii = pes / ival ))
1108	if (( pes - ii * ival > 0 ))
1109	then
1110	printf "\n"
1111	printf "\n +++ tasks per node (option \"-T\") must be an integral"
1112	printf "\n divisor of the total number of processors (option \"-X\")"
1113	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1114	locat=tasks_per_node; (( iec = 0 )); exit
1115	fi
1116	fi
1117
1118	# IBMY HAT NUR EINEN KNOTEN
1119	if [[ $host = ibmy ]]
1120	then
1121	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
1122	then
1123	printf "\n"
1124	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
1125	printf "\n total number of processors (option \"-X\")"
1126	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
1127	locat=tasks_per_node; (( iec = 0 )); exit
1128	fi
1129	fi
1130
1131	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
1132	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
1133	if [[ $use_openmp = true ]]
1134	then
1135	threads_per_task=$tasks_per_node
1136	tasks_per_node=1
1137	fi
1138	OOPT="-O $threads_per_task"
1139	TOPT="-T $tasks_per_node"
1140
1141	# GESAMTZAHL DER KNOTEN BESTIMMEN
1142	if [[ "$tasks_per_node" != "" ]]
1143	then
1144	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
1145	fi
1146
1147	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
1148	# SETZEN
1149	if [[ $node_usage = default ]]
1150	then
1151	if [[ $host = ibms ]]
1152	then
1153	node_usage=shared
1154	elif [[ $host = lctit ]]
1155	then
1156	node_usage=RAM64GB
1157	elif [[ $(echo $host \| cut -c1-5) = lcsgi ]]
1158	then
1159	node_usage=singlejob
1160	else
1161	node_usage=not_shared
1162	fi
1163	fi
1164
1165	if [[ $node_usage != shared && $node_usage != not_shared && $node_usage != singlejob && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != RAM64GB ]]
1166	then
1167	printf "\n"
1168	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
1169	printf "\n \"shared\" or \"not_shared\""
1170	locat=tasks_per_node; (( iec = 0 )); exit
1171	fi
1172
1173	fi
1174
1175	# PRUEFEN, OB HOSTFILE EXISTIERT
1176	if [[ -n $hostfile ]]
1177	then
1178	if [[ ! -f $hostfile ]]
1179	then
1180	printf "\n"
1181	printf "\n +++ hostfile \"$hostfile\" does not exist"
1182	locat=hostfile; exit
1183	fi
1184	fi
1185
1186	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
1187	if [[ $host = ibmy && $do_remote = false ]]
1188	then
1189	if [[ ! -f $HOME/.rhosts ]]
1190	then
1191	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
1192	printf "\n\n *** file:"
1193	printf "\n $HOME/.rhosts"
1194	printf "\n was created\n"
1195	fi
1196	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
1197	then
1198	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
1199	printf "\n\n *** file:"
1200	printf "\n $HOME/.rhosts"
1201	printf "\n was extended by the name of the current host\n"
1202	fi
1203	fi
1204
1205
1206
1207	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
1208	if [[ $queue = none ]]
1209	then
1210	case $host in
1211	(ibmb) if [[ $node_usage = shared ]]
1212	then
1213	queue=cshare
1214	else
1215	queue=csolo
1216	fi;;
1217	(ibmh) queue=no_class;;
1218	(ibmy) queue=parallel;;
1219	(lcsgib) queue=bigq;;
1220	(lcsgih) queue=bigq;;
1221	(lctit) queue=RAM64GB;;
1222	(nech) queue=none;;
1223	(necriam) queue=SP;;
1224	(unics) queue=unics;;
1225	esac
1226	fi
1227
1228
1229	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
1230	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1231	# ERMITTELN
1232	(( i = 0 ))
1233	while (( i < iin ))
1234	do
1235	(( i = i + 1 ))
1236	(( maxcycle = 0 ))
1237
1238	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
1239	if [[ "${actionin[$i]}" = di ]]
1240	then
1241	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
1242	# REM-MASCHINE AUSWERTEN
1243	eval filename=${pathin[$i]}/${endin[$i]}
1244	else
1245	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
1246	# REM-MASCHINE AUSWERTEN
1247	eval filename=${pathin[$i]}/${afname}${endin[$i]}
1248	fi
1249
1250	# PRUEFEN AUF VORHANDENSEIN
1251	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1252	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1253	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1254	then
1255	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
1256	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
1257	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
1258	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
1259	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
1260	if [[ "${transin[$i]}" != "locopt" ]]
1261	then
1262	printf "\n\n +++ INPUT-file: "
1263	if [[ "${extin[$i]}" = "" ]]
1264	then
1265	printf "\n $filename"
1266	else
1267	printf "\n $filename.${extin[$i]}"
1268	fi
1269	printf "\n does not exist\n"
1270	locat=input; exit
1271	else
1272	transin[$i]="unavailable"
1273	fi
1274	else
1275
1276	# ZYKLUSNUMMER FESTSTELLEN
1277	ls -1 -d $filename > filelist 2>/dev/null
1278	ls -1 -d $filename.* >> filelist 2>/dev/null
1279	while read zeile
1280	do
1281	cycle=$(print $zeile \| cut -f2 -d".")
1282	if [[ "$cycle" = "$zeile" ]]
1283	then
1284	(( icycle = 0 ))
1285	elif [[ "$cycle" = "${extin[$i]}" ]]
1286	then
1287	(( icycle = 0 ))
1288	else
1289	(( icycle = $cycle ))
1290	fi
1291	if (( icycle > maxcycle ))
1292	then
1293	(( maxcycle = icycle ))
1294	file_to_be_used=$zeile
1295	fi
1296	done <filelist
1297	rm filelist
1298
1299	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
1300	if (( maxcycle > 0 ))
1301	then
1302	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1303	then
1304	filename=${filename}.$maxcycle.${extin[$i]}
1305	else
1306	filename=${filename}.$maxcycle
1307	fi
1308	else
1309	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
1310	then
1311	filename=${filename}.${extin[$i]}
1312	fi
1313	fi
1314
1315	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1316	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
1317	absnamein[$i]=$filename
1318	if (( maxcycle > 0 ))
1319	then
1320	if [[ "${actionin[$i]}" = di ]]
1321	then
1322	frelin[$i]=${endin[$i]}.$maxcycle
1323	else
1324	frelin[$i]=${afname}${endin[$i]}.$maxcycle
1325	fi
1326	else
1327	if [[ "${actionin[$i]}" = di ]]
1328	then
1329	frelin[$i]=${endin[$i]}
1330	else
1331	frelin[$i]=${afname}${endin[$i]}
1332	fi
1333	fi
1334
1335	fi
1336	done
1337
1338
1339	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
1340	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
1341	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
1342	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
1343	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
1344	(( i = 0 ))
1345	while (( i < iout ))
1346	do
1347	(( i = i + 1 ))
1348	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
1349	then
1350	if [[ "${actionout[$i]}" = tr ]]
1351	then
1352	actionout[$i]=""
1353	elif [[ "${actionout[$i]}" = trpe ]]
1354	then
1355	actionout[$i]=pe
1356	elif [[ "${actionout[$i]}" = tra ]]
1357	then
1358	actionout[$i]=a
1359	fi
1360	(( maxcycle = 0 ))
1361	eval filename=${pathout[$i]}/${fname}${endout[$i]}
1362	eval catalogname=${pathout[$i]}
1363	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
1364	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
1365	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
1366	then
1367
1368	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
1369	if cat /dev/null > $filename
1370	then
1371	rm $filename
1372	else
1373
1374	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
1375	if [[ ! -d $catalogname ]]
1376	then
1377	if mkdir -p $catalogname
1378	then
1379	printf "\n\n *** directory:"
1380	printf "\n $catalogname"
1381	printf "\n was created\n"
1382	else
1383	printf "\n\n +++ OUTPUT-file:"
1384	printf "\n $filename"
1385	printf "\n cannot be created, because directory does not exist"
1386	printf "\n and cannot be created either"
1387	printf "\n"
1388	locat=output ; exit
1389	fi 2>/dev/null
1390	else
1391	printf "\n\n +++ OUTPUT-file:"
1392	printf "\n $filename"
1393	printf "\n cannot be created, although directory exists"
1394	printf "\n"
1395	locat=output ; exit
1396	fi
1397	fi 2>/dev/null
1398	else
1399
1400	# ZYKLUSNUMMER FESTSTELLEN
1401	ls -1 -d $filename > filelist 2>/dev/null
1402	ls -1 -d $filename.* >> filelist 2>/dev/null
1403	while read zeile
1404	do
1405	cycle=$(print $zeile \| cut -f2 -d".")
1406	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
1407	then
1408	(( icycle = 1 ))
1409	else
1410	(( icycle = $cycle + 1 ))
1411	fi
1412	if (( icycle > maxcycle ))
1413	then
1414	(( maxcycle = icycle ))
1415	fi
1416	done <filelist
1417	rm filelist
1418	fi
1419
1420	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
1421	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
1422	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
1423	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
1424	if [[ "${actionout[$i]}" != a ]]
1425	then
1426	if (( maxcycle > 0 ))
1427	then
1428	filename=${filename}.$maxcycle
1429	if cat /dev/null > $filename
1430	then
1431	rm $filename
1432	else
1433	printf "\n +++ OUTPUT-file:"
1434	printf "\n $filename"
1435	printf "\n cannot be created"
1436	locat=output ; exit
1437	fi
1438	fi
1439	else
1440	(( maxcycle = maxcycle - 1 ))
1441	if (( maxcycle > 0 ))
1442	then
1443	filename=${filename}.$maxcycle
1444	fi
1445	fi
1446
1447	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
1448	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
1449	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
1450	pathout[$i]=$filename
1451	if (( maxcycle > 0 ))
1452	then
1453	frelout[$i]=${fname}${endout[$i]}.$maxcycle
1454	else
1455	frelout[$i]=${fname}${endout[$i]}
1456	fi
1457
1458	fi
1459	done
1460
1461
1462	# DAS DVR-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
1463	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
1464	then
1465	if [[ "$dvr_inc" = "" ]]
1466	then
1467	printf "\n\n +++ no value for \"dvr_inc\" given in configuration file"
1468	printf "\n This is required for the dvrp_graphics package.\n"
1469	locat=dvr; exit
1470	fi
1471	if [[ "$dvr_lib" = "" ]]
1472	then
1473	printf "\n\n +++ no value for \"dvr_lib\" given in configuration file"
1474	printf "\n This is required for the dvrp_graphics package.\n"
1475	locat=dvr; exit
1476	fi
1477	fi
1478
1479
1480	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
1481	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
1482	# UEBERSETZT ZU WERDEN)
1483	if [[ "$mainprog" = "" && "$executable" = "" ]]
1484	then
1485	printf "\n +++ neither main program nor executable defined"
1486	locat=source; exit
1487	elif [[ "$mainprog" != "" && "$executable" != "" ]]
1488	then
1489	printf "\n +++ main program as well as executable defined"
1490	locat=source; exit
1491	elif [[ "$mainprog" = "" && "$executable" != "" ]]
1492	then
1493	do_compile=false
1494	fi
1495
1496
1497	# SOURCE-VERZEICHNIS ZUM AUFSAMMELN DER ZU UEBERSETZENDEN PROGRAMMTEILE
1498	# ERZEUGEN. HIERHIN WERDEN SPAETER IM FALL VON BATCH-JOBS AUCH DAS MRUN-
1499	# SCRIPTS SOWIE DIE KONFIGURATIONSDATEI KOPIERT
1500	if [[ $restart_run != true && "$SOURCES_COMPLETE" = "" ]]
1501	then
1502	rm -rf SOURCES_FOR_RUN_$fname
1503	mkdir SOURCES_FOR_RUN_$fname
1504	fi
1505
1506
1507	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
1508	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
1509	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
1510	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
1511	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
1512	then
1513
1514	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
1515	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
1516
1517
1518	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
1519	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
1520	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
1521	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
1522	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
1523	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
1524	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
1525	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
1526	# GESAMMELT
1527	if [[ "$source_list" = WRITE_PERMIT ]]
1528	then
1529
1530	source_list=""
1531	cd $source_path
1532
1533
1534	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
1535	Names=$(ls -1 *.f90 2>&1)
1536	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
1537	Names=$(ls -1 *.F90 2>&1)
1538	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
1539	Names=$(ls -1 *.F 2>&1)
1540	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
1541	Names=$(ls -1 *.f 2>&1)
1542	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
1543	Names=$(ls -1 *.c 2>&1)
1544	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
1545
1546
1547	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
1548	for dateiname in $Filenames
1549	do
1550	if [[ -w $dateiname ]]
1551	then
1552	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
1553	then
1554	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1555	source_list=$source_list"$dateiname "
1556	fi
1557	fi
1558	done
1559
1560	cd - > /dev/null
1561
1562
1563	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
1564	then
1565
1566	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
1567	source_list=""
1568	cd $source_path
1569
1570
1571	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
1572	if [[ ! -d .svn ]]
1573	then
1574	printf "\n\n +++ source directory"
1575	printf "\n \"$source_path\" "
1576	printf "\n is not under control of \"subversion\"."
1577	printf "\n Please do not use mrun-option \"-s LOCALLY_MODIFIED\"\n"
1578	fi
1579
1580
1581	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
1582	Filenames=""
1583	svn status > tmp_mrun
1584	while read line
1585	do
1586	firstc=`echo $line \| cut -c1`
1587	if [[ $firstc = M \|\| $firstc = "?" ]]
1588	then
1589	Name=`echo "$line" \| cut -c8-`
1590	extension=`echo $Name \| cut -d. -f2`
1591	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
1592	then
1593	Filenames="$Filenames "$Name
1594	fi
1595	fi
1596	done < tmp_mrun
1597
1598
1599	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1600	for dateiname in $Filenames
1601	do
1602	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
1603	source_list=$source_list"$dateiname "
1604	done
1605
1606	cd - > /dev/null
1607
1608
1609	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
1610	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
1611	# VORHANDEN
1612	elif [[ "$source_list" != "" && $restart_run != true ]]
1613	then
1614
1615	cd $source_path
1616
1617	for filename in $source_list
1618	do
1619
1620	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
1621	if [[ $(print $filename \| grep -c "/") != 0 ]]
1622	then
1623	printf "\n +++ source code file: $filename"
1624	printf "\n must not contain (\"/\") "
1625	locat=source; exit
1626	fi
1627
1628	if [[ ! -f $filename ]]
1629	then
1630	printf "\n +++ source code file: $filename"
1631	printf "\n does not exist"
1632	locat=source; exit
1633	else
1634	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
1635	fi
1636
1637	done
1638
1639	cd - > /dev/null
1640
1641	fi
1642
1643
1644	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
1645	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
1646	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
1647	if [[ $restart_run != true ]]
1648	then
1649
1650	if [[ ! -f "$source_path/$mainprog" ]]
1651	then
1652	printf "\n\n +++ main program: $mainprog"
1653	printf "\n does not exist in source directory"
1654	printf "\n \"$source_path\"\n"
1655	locat=source; exit
1656	else
1657	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
1658	then
1659	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
1660	source_list=${mainprog}" $source_list"
1661	fi
1662	fi
1663	fi
1664
1665
1666	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1667	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1668	if [[ "$restart_run" != true ]]
1669	then
1670	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1671	if [[ ! -f $makefile ]]
1672	then
1673	printf "\n +++ file \"$makefile\" does not exist"
1674	locat=make; exit
1675	else
1676	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1677	fi
1678	fi
1679
1680
1681	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
1682	if [[ $restart_run != true && "$add_source_path" != "" ]]
1683	then
1684
1685	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
1686	if [[ ! -d $add_source_path ]]
1687	then
1688	printf "\n\n +++ WARNING: additional source code directory"
1689	printf "\n \"$add_source_path\" "
1690	printf "\n does not exist or is not a directory."
1691	printf "\n No source code will be used from this directory!\n"
1692	add_source_path=""
1693	sleep 3
1694	else
1695
1696	cd $add_source_path
1697	found=false
1698
1699	Names=$(ls -1 *.f90 2>&1)
1700	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
1701	Names=$(ls -1 *.F90 2>&1)
1702	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
1703	Names=$(ls -1 *.F 2>&1)
1704	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
1705	Names=$(ls -1 *.f 2>&1)
1706	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
1707	Names=$(ls -1 *.c 2>&1)
1708	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
1709
1710	cd - > /dev/null
1711	cd SOURCES_FOR_RUN_$fname
1712
1713	# COPY MAKEFILE IF EXISTING
1714	if [[ -f $add_source_path/Makefile ]]
1715	then
1716	printf "\n\n *** user Makefile from directory"
1717	printf "\n \"$add_source_path\" is used \n"
1718	sleep 1
1719	cp $add_source_path/Makefile .
1720	fi
1721
1722	for dateiname in $AddFilenames
1723	do
1724	if [[ -f $dateiname ]]
1725	then
1726	printf "\n +++ source code file \"$dateiname\" found in additional"
1727	printf "\n source code directory \"$add_source_path\" "
1728	printf "\n but was also given with option \"-s\" which means that it should be taken"
1729	printf "\n from directory \"$source_path\"."
1730	locat=source; exit
1731	fi
1732
1733	cp $add_source_path/$dateiname .
1734	source_list="$source_list $dateiname"
1735
1736	# CHECK IF FILE IS CONTAINED IN MAKEFILE
1737	if [[ $(grep -c $dateiname Makefile) = 0 ]]
1738	then
1739	printf "\n\n +++ user file \"$dateiname\" "
1740	printf "\n is not listed in Makefile \n"
1741	locat=source; exit
1742	else
1743
1744	# Default User-Interface von der Liste entfernen, falls Datei
1745	# ein User-Interface enthaelt
1746	# if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
1747	# then
1748	# if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
1749	# then
1750	# rm -rf user_interface.f90
1751	# source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
1752	# printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
1753	# printf "\n since a user-interface is found in file"
1754	# printf "\n \"$add_source_path/$dateiname\" \n"
1755	# sleep 3
1756	# else
1757	if [[ $found = false ]]
1758	then
1759	found=true
1760	printf "\n\n *** following user file(s) added to the"
1761	printf " files to be translated:\n "
1762	fi
1763	printf "$dateiname "
1764	sleep 0.5
1765	fi
1766	done
1767	[[ $found = true ]] && printf "\n"
1768	cd - > /dev/null
1769	fi
1770	fi
1771
1772
1773	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
1774	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
1775	if [[ $restart_run != true && -n $package_list ]]
1776	then
1777
1778	cd $source_path
1779
1780	for package in $package_list
1781	do
1782
1783	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
1784
1785	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
1786	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
1787	# LIEFERT
1788	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
1789
1790
1791	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
1792	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
1793	for source_list_name in $package_source_list
1794	do
1795	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
1796	then
1797
1798	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
1799	ending=`echo $source_list_name \| cut -f2 -d.`
1800	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
1801	then
1802	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
1803	source_list="$source_list $source_list_name"
1804	fi
1805	fi
1806	done
1807	done
1808
1809	cd - > /dev/null
1810	fi
1811
1812
1813	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
1814	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
1815	# if [[ "$restart_run" != true ]]
1816	# then
1817	# [[ "$makefile" = "" ]] && makefile=$source_path/Makefile
1818	# if [[ ! -f $makefile ]]
1819	# then
1820	# printf "\n +++ file \"$makefile\" does not exist"
1821	# locat=make; exit
1822	# else
1823	# cp $makefile SOURCES_FOR_RUN_$fname/Makefile
1824	# fi
1825	# fi
1826
1827	fi # do_compile=true
1828
1829
1830	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
1831	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
1832	if [[ $do_compile = true ]]
1833	then
1834
1835	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
1836	# ZUSAMMENSETZEN
1837	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
1838	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1839	then
1840	cpp_options="${cpp_options},-D__ibm=__ibm"
1841	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
1842	then
1843	cpp_options="$cpp_options -D__nec"
1844	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
1845	then
1846	cpp_options="$cpp_options -D__lc"
1847	else
1848	cpp_options="$cpp_options -D__$localhost"
1849	fi
1850
1851	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
1852	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1853	then
1854	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
1855	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
1856	else
1857	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
1858	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
1859	fi
1860
1861	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
1862	if [[ -n $package_list ]]
1863	then
1864	for package in $package_list
1865	do
1866	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1867	then
1868	if [[ $package != "dvrp_graphics+1PE" ]]
1869	then
1870	cpp_options="${cpp_options},-D__$package=__$package"
1871	else
1872	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
1873	export use_seperate_pe_for_dvrp_output=true
1874	fi
1875	else
1876	if [[ $package != "dvrp_graphics+1PE" ]]
1877	then
1878	cpp_options="$cpp_options -D__$package"
1879	else
1880	cpp_options="$cpp_options -D__dvrp_graphics"
1881	export use_seperate_pe_for_dvrp_output=true
1882	fi
1883	fi
1884	done
1885	fi
1886
1887	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
1888	if [[ -n $cpp_opts ]]
1889	then
1890	for popts in $cpp_opts
1891	do
1892	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
1893	then
1894	cpp_options="${cpp_options},-D__$popts=__$popts"
1895	else
1896	cpp_options="$cpp_options -D__$popts"
1897	fi
1898	done
1899	fi
1900
1901	else
1902
1903
1904	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
1905	if [[ $do_remote = false ]]
1906	then
1907	if [[ ! -f $executable ]]
1908	then
1909	printf "\n +++ executable file: $executable"
1910	printf "\n does not exist"
1911	locat=executable; exit
1912	fi
1913	fi
1914	fi
1915
1916
1917	# JOBMODUS FESTSTELLEN
1918	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
1919	then
1920	jobmo=BATCH
1921	else
1922	jobmo=INTERACTIVE
1923	fi
1924
1925
1926	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
1927	# DURCH BENUTZER ANDERWEITIG VEREINBART
1928	if [[ "$compiler_name" = "" ]]
1929	then
1930
1931	printf "\n +++ no compiler specified for \"$host $cond1 $cond2\""
1932	locat=compiler_name; exit
1933
1934	fi
1935
1936
1937	# COMPILER AUF RIAMS NEC UEBERSCHREIBEN
1938	[[ $localhost = necriam ]] && compiler_name=mpif90
1939
1940
1941
1942	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
1943	kennung=$RANDOM
1944	if [[ "$tmp_user_catalog" = "" ]]
1945	then
1946	if [[ $localhost = ibmh ]]
1947	then
1948	tmp_user_catalog=$SCRATCH
1949	elif [[ $localhost = nech ]]
1950	then
1951	tmp_user_catalog=$WRKSHR
1952	else
1953	tmp_user_catalog=/tmp
1954	fi
1955	fi
1956	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
1957
1958
1959	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
1960	# BESTIMMEN
1961	if [[ "$tmp_data_catalog" = "" ]]
1962	then
1963	if [[ $localhost = ibmb ]]
1964	then
1965	tmp_data_catalog=$WORK/mrun_restart_data
1966	elif [[ $localhost = nech ]]
1967	then
1968	tmp_data_catalog=$WRKSHR/mrun_restart_data
1969	else
1970	tmp_data_catalog=/tmp/mrun_restart_data
1971	fi
1972	fi
1973
1974
1975	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
1976	# ERSETZEN
1977	if [[ $do_remote = false && $do_compile = true ]]
1978	then
1979	eval fopts=\"$fopts\"
1980	eval lopts=\"$lopts\"
1981	fi
1982
1983
1984
1985	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
1986	fopts="$fopts $netcdf_inc $dvr_inc"
1987	lopts="$lopts $netcdf_lib $dvr_lib"
1988	ROPTS="$ropts"
1989	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lcsgih \|\| $host = lcsgib \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 \|\| $host = lck ) && -n $numprocs ]]
1990	then
1991	XOPT="-X $numprocs"
1992	fi
1993
1994
1995
1996	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
1997	# GRAMM BENOETIGT
1998	done=false
1999	while [[ $done = false ]]
2000	do
2001	cputime=$cpumax
2002	if (( $cputime == 0 ))
2003	then
2004	if [[ $do_batch = true ]]
2005	then
2006	printf "\n +++ cpu-time is undefined"
2007	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
2008	printf "\n >>> "
2009	read cputime 1>/dev/null 2>&1
2010	else
2011	cputime=10000000 # NO CPU LIMIT FOR INTERACTIVE RUNS
2012	fi
2013	else
2014	done=true
2015	fi
2016	cpumax=$cputime
2017	done
2018
2019	(( minuten = cputime / 60 ))
2020	(( sekunden = cputime - minuten * 60 ))
2021
2022
2023	# PRUEFEN DER KERNSPEICHERANFORDERUNG
2024	if [[ $do_batch = true ]]
2025	then
2026	done=false
2027	while [[ $done = false ]]
2028	do
2029	if (( memory == 0 ))
2030	then
2031	printf "\n +++ memory demand is undefined"
2032	printf "\n >>> Please type memory in MByte per process as INTEGER:"
2033	printf "\n >>> "
2034	read memory 1>/dev/null 2>&1
2035	else
2036	done=true
2037	fi
2038	done
2039	fi
2040
2041
2042	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
2043	if [[ $do_remote = true && -z $remote_username ]]
2044	then
2045	while [[ -z $remote_username ]]
2046	do
2047	printf "\n +++ username on remote host \"$host\" is undefined"
2048	printf "\n >>> Please type username:"
2049	printf "\n >>> "
2050	read remote_username
2051	done
2052	mc="$mc -u$remote_username"
2053	fi
2054
2055
2056	# SET DEFAULT VALUE FOR MPI MODULE TO BE USED ON SGI-ALTIX
2057	if [[ $host = lcsgib \|\| $host = lcsgih ]]
2058	then
2059	[[ "$mpilib" = "" ]] && export mpilib=mpt
2060	fi
2061
2062
2063
2064	###########################################################################
2065	# HEADER-AUSGABE
2066	###########################################################################
2067
2068
2069	calltime=$(date)
2070	printf "\n"
2071	# [[ $silent = false ]] && clear
2072	printf "#--------------------------------------------------------------# \n"
2073	printf "\| $version$calltime \| \n"
2074	printf "\| \| \n"
2075	spalte1="called on:"; spalte2=$localhost_realname
2076	printf "\| $spalte1$spalte2 \| \n"
2077	if [[ $local_compile = false ]]
2078	then
2079	if [[ $do_remote = true ]]
2080	then
2081	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
2082	else
2083	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
2084	fi
2085	else
2086	spalte1="compiling test only!"; spalte2=""
2087	fi
2088	printf "\| $spalte1$spalte2 \| \n"
2089	if [[ -n $numprocs ]]
2090	then
2091	spalte1="number of PEs:"; spalte2=$numprocs
2092	printf "\| $spalte1$spalte2 \| \n"
2093	fi
2094	if [[ -n $tasks_per_node ]]
2095	then
2096	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
2097	printf "\| $spalte1$spalte2 \| \n"
2098	fi
2099	if [[ $threads_per_task != 1 ]]
2100	then
2101	spalte1="threads per task:"; spalte2="$threads_per_task"
2102	printf "\| $spalte1$spalte2 \| \n"
2103	fi
2104	printf "\| \| \n"
2105	if [[ $do_compile = true ]]
2106	then
2107	spalte1=cpp-directives:; spalte2=$cpp_options
2108	printf "\| $spalte1$spalte2 \| \n"
2109	zeile=$(echo "$cpp_options" \| cut -c41-)
2110	while [[ "$zeile" != "" ]]
2111	do
2112	spalte1=""
2113	spalte2=$zeile
2114	printf "\| $spalte1$spalte2 \| \n"
2115	zeile=$(echo "$zeile" \| cut -c41-)
2116	done
2117
2118	spalte1=compiler-options:; spalte2="$fopts"
2119	printf "\| $spalte1$spalte2 \| \n"
2120	zeile=$(echo "$fopts" \| cut -c41-)
2121	while [[ "$zeile" != "" ]]
2122	do
2123	spalte1=""
2124	spalte2=$zeile
2125	printf "\| $spalte1$spalte2 \| \n"
2126	zeile=$(echo "$zeile" \| cut -c41-)
2127	done
2128
2129	spalte1=linker-options:; spalte2=$lopts
2130	printf "\| $spalte1$spalte2 \| \n"
2131	zeile=$(echo "$lopts" \| cut -c41-)
2132	while [[ "$zeile" != "" ]]
2133	do
2134	spalte1=""
2135	spalte2=$zeile
2136	printf "\| $spalte1$spalte2 \| \n"
2137	zeile=$(echo "$zeile" \| cut -c41-)
2138	done
2139
2140	spalte1="main program":; spalte2=$mainprog
2141	printf "\| $spalte1$spalte2 \| \n"
2142	else
2143	spalte1=executable:; spalte2=$executable
2144	printf "\| $spalte1$spalte2 \| \n"
2145	fi
2146	printf "\| \| \n"
2147	spalte1="base name of files":; spalte2=$fname
2148	printf "\| $spalte1$spalte2 \| \n"
2149	if [[ $fname != $afname ]]
2150	then
2151	spalte1="base name of input files":; spalte2=$afname
2152	printf "\| $spalte1$spalte2 \| \n"
2153	fi
2154	spalte1="INPUT control list":; spalte2=$input_list
2155	printf "\| $spalte1$spalte2 \| \n"
2156	spalte1="OUTPUT control list":; spalte2=$output_list
2157	printf "\| $spalte1$spalte2 \| \n"
2158
2159	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
2160	then
2161	spalte1="memory demand / PE":; spalte2="$memory MB"
2162	printf "\| $spalte1$spalte2 \| \n"
2163	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
2164	printf "\| $spalte1$spalte2 \| \n"
2165	fi
2166
2167	if [[ $do_compile = true ]]
2168	then
2169	printf "\| \| \n"
2170	printf "\| Files to be compiled: \| \n"
2171	zeile=$source_list
2172	while [[ "$zeile" != "" ]]
2173	do
2174	spalte3=$zeile
2175	printf "\| $spalte3 \| \n"
2176	zeile=$(echo "$zeile" \| cut -c61-)
2177	done
2178	fi
2179	printf "#--------------------------------------------------------------#"
2180
2181
2182
2183	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
2184	if [[ $do_trace = true ]]
2185	then
2186	(( i = 0 ))
2187	while (( i < iin ))
2188	do
2189	(( i = i + 1 ))
2190	if (( i == 1 ))
2191	then
2192	printf "\n\n >>> INPUT-file assignments:\n"
2193	fi
2194	printf "\n ${localin[$i]} : ${absnamein[$i]}"
2195	done
2196	(( i = 0 ))
2197	while (( i < iout ))
2198	do
2199	(( i = i + 1 ))
2200	if (( i == 1 ))
2201	then
2202	printf "\n\n >>> OUTPUT-file assignments:\n"
2203	fi
2204	printf "\n ${localout[$i]} : ${pathout[$i]}"
2205	done
2206	(( i = 0 ))
2207	while (( i < iic ))
2208	do
2209	(( i = i + 1 ))
2210	if (( i == 1 ))
2211	then
2212	printf "\n\n >>> INPUT-commands:\n"
2213	fi
2214	printf "\n ${in_command[$i]}"
2215	done
2216	(( i = 0 ))
2217	while (( i < ioc ))
2218	do
2219	(( i = i + 1 ))
2220	if (( i == 1 ))
2221	then
2222	printf "\n\n >>> OUTPUT-commands:\n"
2223	fi
2224	printf "\n ${out_command[$i]}"
2225	done
2226	fi
2227
2228
2229	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
2230	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
2231	then
2232	antwort=dummy
2233	printf "\n\n"
2234	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
2235	do
2236	printf " >>> everything o.k. (y/n) ? "
2237	read antwort
2238	done
2239	if [[ $antwort = n \|\| $antwort = N ]]
2240	then
2241	locat=user_abort; (( iec = 0 )); exit
2242	fi
2243	if [[ $do_batch = true ]]
2244	then
2245	printf " >>> batch-job will be created and submitted"
2246	else
2247	if [[ $local_compile = false ]]
2248	then
2249	printf " >>> MRUN will now continue to execute on this machine"
2250	else
2251	printf " >>> a test compilation will now be carried out on this machine"
2252	fi
2253	fi
2254	fi
2255
2256
2257
2258
2259	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
2260	# CHENDE AKTIONEN DURCHGEFUEHRT
2261	if [[ $do_batch = false ]]
2262	then
2263
2264
2265	# TEMPORAEREN KATALOG ERZEUGEN
2266	mkdir -p $TEMPDIR
2267	chmod go+rx $TEMPDIR
2268	tmpcreate=true
2269
2270
2271	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
2272	# TEMPORAERES VERZEICHNIS KOPIEREN
2273	if [[ $do_compile = true ]]
2274	then
2275
2276	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
2277	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
2278	if [[ $localhost = nech ]]
2279	then
2280	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
2281	if mkdir -p $TEMPDIR_COMPILE
2282	then
2283	printf "\n *** \"$TEMPDIR_COMPILE\" "
2284	printf "\n is generated as temporary directory for cross compiling\n"
2285	else
2286	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
2287	printf "\n needed for cross compilation failed"
2288	locat=compile
2289	exit
2290	fi
2291	else
2292	TEMPDIR_COMPILE=$TEMPDIR
2293	fi
2294
2295
2296	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
2297	line=""
2298	grep "%depository_path" $config_file > tmp_mrun
2299	while read line
2300	do
2301	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2302	then
2303	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
2304	then
2305	global_depository_path=`echo $line \| cut -d" " -s -f2`
2306	fi
2307	fi
2308	done < tmp_mrun
2309
2310	line=""
2311	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
2312	while read line
2313	do
2314	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
2315	then
2316	if [[ "$(echo $line \| cut -d" " -s -f4)" = "$cond1" && "$(echo $line \| cut -d" " -s -f5)" = "$cond2" ]]
2317	then
2318	local_depository_path=`echo $line \| cut -d" " -s -f2`
2319	fi
2320	fi
2321	done < tmp_mrun
2322
2323	if [[ "$local_depository_path" = "" ]]
2324	then
2325	if [[ "$global_depository_path" != "" ]]
2326	then
2327	local_depository_path=$global_depository_path
2328	else
2329	printf "\n\n +++ no depository path found in configuration file"
2330	printf "\n for local host \"$localhost\" "
2331	printf "\n please set \"\%depository_path\" in configuration file\n"
2332	locat=config_file; exit
2333	fi
2334	fi
2335	eval local_depository_path=$local_depository_path
2336	[[ "$cond1" != "" ]] && local_depository_path=${local_depository_path}_$cond1
2337	[[ "$cond2" != "" ]] && local_depository_path=${local_depository_path}_$cond2
2338
2339
2340	basename=`print $mainprog \| cut -f1 -d"."`
2341	eval make_depository=${local_depository_path}/${basename}_current_version.tar
2342	if [[ ! -f $make_depository ]]
2343	then
2344	printf "\n"
2345	printf "\n *** WARNING: make depository \"$make_depository\" not found"
2346	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
2347	else
2348	cp $make_depository $TEMPDIR_COMPILE
2349	cd $TEMPDIR_COMPILE
2350	tar -xf $make_depository > /dev/null 2>&1
2351	cd - > /dev/null
2352	fi
2353
2354	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
2355
2356	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
2357	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
2358	# MAKEFILE EINTRAGEN
2359	# cd $TEMPDIR_COMPILE
2360	# interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
2361	# if [[ "$interface_file" != "" ]]
2362	# then
2363	# interface_file=`echo $interface_file \| cut -d"." -f1`
2364	# mv Makefile Makefile_old
2365	# sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
2366	# fi
2367	# cd - > /dev/null
2368	else
2369	cp $executable ${TEMPDIR}/a.out
2370	fi
2371
2372
2373	# WECHSEL IN TEMPORAEREN KATALOG
2374	cd $TEMPDIR
2375	printf "\n *** changed to temporary directory: $TEMPDIR"
2376
2377
2378	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
2379	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
2380	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
2381	# ERMITTELN
2382	(( i = 0 ))
2383	while (( i < iout ))
2384	do
2385	(( i = i + 1 ))
2386	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
2387	then
2388	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2389	else
2390	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
2391	fi
2392	done
2393
2394
2395	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
2396	if [[ $do_compile = true ]]
2397	then
2398
2399
2400	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
2401	printf "\n\n\n *** compilation starts \n$striche\n"
2402	printf " *** compilation with make using following options:\n"
2403	printf " make depository: $make_depository"
2404	printf " compilername: $compiler_name\n"
2405	printf " options: $fopts\n"
2406	printf " preprocessor-directives: $cpp_options \n"
2407	printf " linker-options: $lopts \n"
2408	printf " source code files: $source_list \n"
2409
2410	if [[ $localhost = nech ]]
2411	then
2412	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2413	cp $TEMPDIR_COMPILE/a.out .
2414	[[ $? != 0 ]] && compile_error=true
2415	rm -rf $TEMPDIR_COMPILE
2416	elif [[ $localhost = ibmh ]]
2417	then
2418	printf " compiler is called via ssh on \"plogin1\" \n"
2419	ssh plogin1 -l $usern "export PATH=/sw/ibm/xlf/12.1.0.3/usr/bin:$PATH; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2420	[[ ! -f a.out ]] && compile_error=true
2421	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2422	elif [[ $localhost = lcsgib ]]
2423	then
2424	printf " compiler is called via ssh on \"bicegate\" using module \"$mpilib\" \n"
2425	ssh 130.73.232.103 -l $usern ". /usr/share/modules/init/bash; module load ifort/11.0.069; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
2426	[[ ! -f a.out ]] && compile_error=true
2427	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2428	elif [[ $localhost = lcsgih ]]
2429	then
2430	printf " compiler is called via ssh on \"hicegate2\" using module \"$mpilib\" \n"
2431	ssh 130.75.4.103 -l $usern ". /usr/share/modules/init/bash; module load ifort/11.0.069; module load $mpilib; cd $TEMPDIR; make -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" 2>&1 "
2432	[[ ! -f a.out ]] && compile_error=true
2433	continue # ANDERENFALLS IST STATUS=1, FALLS A.OUT VORHANDEN
2434	else
2435	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
2436	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
2437	fi
2438
2439	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
2440	then
2441	printf "\n +++ error occured while compiling or linking"
2442	locat=compile
2443
2444	# WORKAROUND: REMOVE IF CONSTRUCT LATER, BUT KEEP THE EXIT!
2445	# if [[ $localhost != lcsgib && $localhost != lcsgih ]]
2446	# then
2447	exit
2448	# else
2449	# locat=normal
2450	# fi
2451	else
2452	printf "$striche\n *** compilation finished \n"
2453	fi
2454	fi
2455
2456
2457	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
2458	if [[ $local_compile = true ]]
2459	then
2460	cd $HOME
2461	rm -rf $TEMPDIR
2462	locat=local_compile; exit
2463	fi
2464
2465
2466	# BEREITSTELLEN DER INPUT-DATEIEN
2467	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
2468	(( i = 0 ))
2469	while (( i < iin ))
2470	do
2471	(( i = i + 1 ))
2472	if (( i == 1 ))
2473	then
2474	printf "\n\n *** providing INPUT-files:\n$striche"
2475	fi
2476
2477
2478	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
2479	if [[ "${transin[$i]}" = unavailable ]]
2480	then
2481	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
2482	then
2483	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
2484	printf "\n is not available!"
2485	else
2486	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
2487	printf "\n is not available!"
2488	fi
2489	continue
2490	fi
2491
2492	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
2493	files_for_pes=false; datentyp=file
2494	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
2495	then
2496	files_for_pes=true; datentyp=directory
2497	actionin[$i]=""
2498	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
2499	then
2500	actionin[$i]=""
2501	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
2502	then
2503	files_for_pes=true; datentyp=directory
2504	actionin[$i]="ar"
2505	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
2506	then
2507	actionin[$i]="ar"
2508	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
2509	then
2510	files_for_pes=true; datentyp=directory
2511	actionin[$i]="fl"
2512	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
2513	then
2514	actionin[$i]="fl"
2515	fi
2516
2517	if [[ $files_for_pes = true ]]
2518	then
2519	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
2520	else
2521	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
2522	fi
2523
2524	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
2525	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
2526	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
2527	# SERVER ZU HOLEN
2528	if [[ "${actionin[$i]}" = fl ]]
2529	then
2530	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
2531	if [[ $files_for_pes = false ]]
2532	then
2533	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
2534	then
2535	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
2536	got_tmp[$i]=true
2537	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2538	then
2539	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2540	printf "\n *** trying to use backup copy in \"$WORK\" "
2541	cp $WORK/${frelin[$i]} ${localin[$i]}
2542	else
2543	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2544	printf "\n or \"$tmp_data_catalog\" does not exist!"
2545	printf "\n *** trying to get copy from archive"
2546	actionin[$i]=ar
2547	fi
2548	else
2549	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
2550	then
2551	mkdir ${localin[$i]}
2552	cd $tmp_data_catalog/${frelin[$i]}
2553	for file in $(ls *)
2554	do
2555	ln $file $TEMPDIR/${localin[$i]}
2556	done
2557	cd $TEMPDIR
2558	got_tmp[$i]=true
2559	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
2560	then
2561	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
2562	printf "\n *** trying to use backup copy in \"$WORK\" "
2563	cp -r $WORK/${frelin[$i]} ${localin[$i]}
2564	else
2565	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
2566	printf "\n or \"$tmp_data_catalog\" does not exist!"
2567	printf "\n *** trying to get copy from archive"
2568	actionin[$i]=ar
2569	fi
2570	fi
2571	fi
2572
2573
2574	# DATEI LIEGT AUF ARCHIV-SERVER
2575	if [[ "${actionin[$i]}" = ar ]]
2576	then
2577
2578	if [[ $files_for_pes = false ]]
2579	then
2580	printf "\n file will be restored from archive-system ($archive_system)!"
2581	else
2582	printf "\n directory will be restored from archive-system ($archive_system)!"
2583	fi
2584
2585	file_restored=false
2586
2587	if [[ $archive_system = asterix ]]
2588	then
2589	do_stagein=true
2590	(( stagein_anz = 0 ))
2591	while [[ $do_stagein = true ]]
2592	do
2593	if [[ $files_for_pes = false ]]
2594	then
2595	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
2596	else
2597	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
2598	fi
2599	cat STAGEIN_OUTPUT
2600	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
2601	then
2602	file_restored=true
2603	do_stagein=false
2604	else
2605	(( stagein_anz = stagein_anz + 1 ))
2606	if (( stagein_anz == 10 ))
2607	then
2608	printf "\n +++ stagein stoped after 10 tries"
2609	locat=stage
2610	exit
2611	fi
2612	printf "\n +++ restoring from archive failed, trying again:"
2613	sleep 900
2614	fi
2615	done
2616	elif [[ $archive_system = DMF ]]
2617	then
2618	if [[ $files_for_pes = false ]]
2619	then
2620	printf "\n +++ restoring of single files impossible with $archive_system !\n"
2621	locat=DMF
2622	exit
2623	else
2624	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
2625	cp -r $ARCHIVE/${frelin[$i]} $PWD
2626	file_restored=true
2627	fi
2628	elif [[ $archive_system = tivoli ]]
2629	then
2630	if [[ $files_for_pes = false ]]
2631	then
2632	if [[ $localhost = ibmh ]]
2633	then
2634	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2635	else
2636	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
2637	fi
2638	else
2639	(( inode = 0 ))
2640	while (( inode < nodes ))
2641	do
2642	if [[ $localhost = ibmh ]]
2643	then
2644	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2645	else
2646	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
2647	fi
2648	(( inode = inode + 1 ))
2649	done
2650	fi
2651	file_restored=true
2652	elif [[ $archive_system = ut ]]
2653	then
2654	if [[ $files_for_pes = false ]]
2655	then
2656	cp $UT/${frelin[$i]} .
2657	else
2658	(( inode = 0 ))
2659	while (( inode < nodes ))
2660	do
2661	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
2662	(( inode = inode + 1 ))
2663	done
2664	fi
2665	file_restored=true
2666	else
2667	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
2668	locat=rearchive
2669	exit
2670	fi
2671
2672	if [[ $file_restored = true ]]
2673	then
2674
2675	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
2676	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
2677	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
2678	if [[ $files_for_pes = false ]]
2679	then
2680	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
2681	else
2682	mkdir $tmp_data_catalog/${frelin[$i]}
2683	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
2684	fi
2685	got_tmp[$i]=true
2686
2687	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
2688	mv ${frelin[$i]} ${localin[$i]}
2689
2690	fi
2691	fi
2692
2693
2694	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
2695	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
2696	then
2697
2698	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
2699	then
2700
2701	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
2702	printf "\n file will be provided for $numprocs processors"
2703	mkdir ${localin[$i]}
2704	ival=$numprocs
2705	(( ii = 0 ))
2706	while (( ii <= ival-1 ))
2707	do
2708	if (( ii < 10 ))
2709	then
2710	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
2711	elif (( ii < 100 ))
2712	then
2713	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
2714	elif (( ii < 1000 ))
2715	then
2716	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
2717	else
2718	cp ${absnamein[$i]} ${localin[$i]}/_$ii
2719	fi
2720	(( ii = ii + 1 ))
2721	done
2722
2723	else
2724
2725	if [[ $files_for_pes = true ]]
2726	then
2727
2728	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
2729	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
2730	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
2731	# PER MOVE UMBENANNT WERDEN
2732	printf "\n providing $numprocs files for the respective processors"
2733	mkdir ${localin[$i]}
2734	if [[ $link_local_input = true ]]
2735	then
2736	printf " using ln -f\n"
2737	cd ${absnamein[$i]}
2738	for file in $(ls *)
2739	do
2740	ln -f $file ${localin[$i]}
2741	done
2742	cd $TEMPDIR
2743	fi
2744	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp -r"
2745	if [[ ! -f "${localin[$i]}/_0000" ]]
2746	then
2747	if [[ $link_local_input = true ]]
2748	then
2749	printf " ln failed for .../_0000, using cp...\n"
2750	fi
2751	cp -r ${absnamein[$i]}/* ${localin[$i]}
2752	fi
2753
2754	else
2755	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
2756	if [[ $link_local_input = true ]]
2757	then
2758	printf " using ln -f\n"
2759	ln -f ${absnamein[$i]} ${localin[$i]}
2760	fi
2761	# If "ln -f" fails of if "$link_local_input = false" do a normal "cp"
2762	if [[ ! -f "${localin[$i]}" ]]
2763	then
2764	if [[ $link_local_input = true ]]
2765	then
2766	printf " ln failed, using cp...\n"
2767	fi
2768	cp ${absnamein[$i]} ${localin[$i]}
2769	fi
2770	fi
2771	fi
2772	fi
2773
2774	done
2775	if (( i != 0 ))
2776	then
2777	printf "\n$striche\n *** all INPUT-files provided \n"
2778	fi
2779
2780
2781	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
2782	(( i = 0 ))
2783	while (( i < iic ))
2784	do
2785	(( i = i + 1 ))
2786	if (( i == 1 ))
2787	then
2788	printf "\n\n *** execution of INPUT-commands:\n$striche"
2789	fi
2790	printf "\n >>> ${in_command[$i]}"
2791	eval ${in_command[$i]}
2792	if (( i == iic ))
2793	then
2794	printf "\n$striche\n"
2795	fi
2796	done
2797
2798
2799	# VERBLEIBENDE CPU-ZEIT BERECHNEN
2800	cpurest=${cpumax}.
2801
2802
2803	# START DVR STREAMING SERVER
2804	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
2805	then
2806	if [[ "$dvr_server" != "" ]]
2807	then
2808
2809	printf "\n\n *** preparing the dvr streaming server configuration file"
2810
2811	# Check, if a dvr server is already running
2812	running_dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config \| grep -v grep) \| cut -d" " -f2`
2813	if [[ "$running_dvrserver_id" != "" ]]
2814	then
2815
2816	printf "\n\n +++ WARNING: A dvr server with id=$running_dvrserver_id is already running!"
2817	printf "\n This server is used instead starting a new one!"
2818	printf "\n If required, script \"process_dvr_output\" has to be run manually."
2819
2820	else
2821
2822	# COPY CONFIGURATION FILE FOR STREAMING SERVER FROM REPOSITORY TO HERE
2823	if [[ -f ${PALM_BIN}/.dvrserver.config ]]
2824	then
2825	cp ${PALM_BIN}/.dvrserver.config .
2826
2827	# Entering the BASEDIR, UID and GID into this file
2828	user_id=`id -u`
2829	group_id=`id -g`
2830	# & is needed as seperator, because TEMPDIR contains /
2831	sed "s&<replace by dvr data directory>&${TEMPDIR}&g" .dvrserver.config > .dvrserver.1
2832	sed "s/<replace by user id>/$user_id/g" .dvrserver.1 > .dvrserver.2
2833	sed "s/<replace by group id>/$group_id/g" .dvrserver.2 > .dvrserver.3
2834	mv .dvrserver.3 .dvrserver.config
2835	rm .dvrserver.1 .dvrserver.2
2836
2837	# Start dvr server in background, get his id and print on terminal
2838	$dvr_server .dvrserver.config >> DVR_LOGFILE 2>&1 &
2839	dvrserver_id=`echo $(ps -edaf \| grep .dvrserver.config) \| cut -d" " -f2`
2840	printf "\n *** streaming server with id=$dvrserver_id is started in background"
2841	local_dvrserver_running=.TRUE.
2842	else
2843	printf "\n +++ missing file \".dvrserver.config\" in directory:"
2844	printf "\n \"$PALM_BIN\" "
2845	locat=dvr
2846	exit
2847	fi
2848
2849	fi
2850
2851	else
2852	printf "\n\n --- INFORMATIVE: no dvr streaming server will be started"
2853	fi
2854	fi
2855
2856
2857	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
2858	# LESEN VON PALM)
2859	cat > ENVPAR << %%END%%
2860	&envpar run_identifier = '$fname', host = '$localhost',
2861	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
2862	maximum_cpu_time_allowed = ${cpumax}.,
2863	revision = '$global_revision',
2864	local_dvrserver_running = $local_dvrserver_running /
2865
2866	%%END%%
2867
2868
2869	# PROGRAMMSTART
2870	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
2871	PATH=$PATH:$TEMPDIR
2872
2873	# MPI debug option (argument checking, slows down execution due to increased latency)
2874	if [[ "$mpi_debug" = true ]]
2875	then
2876	export MPI_CHECK_ARGS=1
2877	printf "\n +++ MPI_CHECK_ARGS=$MPI_CHECK_ARGS"
2878	fi
2879
2880	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
2881	then
2882	if [[ "$ENVIRONMENT" = BATCH ]]
2883	then
2884	if [[ $(echo $localhost \| cut -c1-5) != lcsgi ]]
2885	then
2886	printf "\n +++ debug is allowed in interactive mode only"
2887	locat=debug
2888	exit
2889	fi
2890	fi
2891	if [[ $localhost = decalpha ]]
2892	then
2893	dxladebug a.out
2894	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
2895	then
2896
2897	# SETUP THE IBM MPI ENVIRONMENT
2898	export MP_SHARED_MEMORY=yes
2899	export AIXTHREADS_SCOPE=S
2900	export OMP_NUM_THREADS=$threads_per_task
2901	export AUTHSTATE=files
2902	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2903
2904	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
2905	export MP_ADAPTER_USE=shared
2906	export MP_CPU_USE=multiple
2907	export MP_TIMEOUT=1200
2908
2909	unset MP_TASK_AFFINITY
2910
2911	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
2912	#(( ii = 1 ))
2913	#while (( ii <= $numprocs ))
2914	#do
2915	# echo $localhost_realname >> hostfile
2916	# (( ii = ii + 1 ))
2917	#done
2918	#export MP_HOSTFILE=hostfile
2919
2920	if [[ "$LOADLBATCH" = yes ]]
2921	then
2922	totalview poe a.out $ROPTS
2923	else
2924	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2925	export TVDSVRLAUNCHCMD=ssh
2926	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
2927	fi
2928	elif [[ $(echo $localhost \| cut -c1-5) = lcsgi ]]
2929	then
2930	# CURRENTLY NO DEBUGGER ON LCSGI
2931	if [[ $run_coupled_model = true ]]
2932	then
2933	printf "\n +++ no debug in coupled mode available on \"$localhost\" "
2934	locat=debug
2935	exit
2936	else
2937	echo "no_coupling" > runfile_atmos
2938	fi
2939	(( ii = $numprocs / $threads_per_task ))
2940	export OMP_NUM_THREADS=$threads_per_task
2941	echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
2942	if [[ $threads_per_task != 1 ]]
2943	then
2944	printf "\n threads per task: $threads_per_task"
2945	fi
2946	printf "\n\n"
2947	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
2948	then
2949	# export MPI_LAUNCH_TIMEOUT=360
2950	if [[ "$totalview" = true ]]
2951	then
2952	printf "\n running totalview debugger"
2953	mpiexec_mpt -tv -n $ii ./a.out $ROPTS < runfile_atmos
2954	else
2955	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
2956	fi
2957	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
2958	then
2959	# ulimit -s 300000 # A too large stack size causes problems
2960	# export MV2_NUM_PORTS=2
2961	# export MV2_CPU_MAPPING=0:1:2:3
2962	if [[ "$totalview" = true ]]
2963	then
2964	printf "\n running totalview debugger"
2965	mpiexec -tv ./a.out $ROPTS < runfile_atmos
2966	else
2967	mpiexec ./a.out $ROPTS < runfile_atmos
2968	fi
2969	fi
2970	else
2971	printf "\n +++ no debug available on \"$localhost\" "
2972	printf "\n or not implemented in mrun so far"
2973	locat=debug
2974	exit
2975	fi
2976	else
2977	if [[ -n $numprocs ]]
2978	then
2979	# RUNNING THE PROGRAM ON PARALLEL MACHINES
2980	if [[ $(echo $host \| cut -c1-3) = ibm ]]
2981	then
2982	# SETUP THE IBM MPI ENVIRONMENT
2983	if [[ $host != ibmh ]]
2984	then
2985	export MP_SHARED_MEMORY=yes
2986	export AIXTHREAD_SCOPE=S
2987	export OMP_NUM_THREADS=$threads_per_task
2988	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
2989	export AUTHSTATE=files
2990	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
2991	# export MP_PRINTENV=yes
2992
2993	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
2994	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
2995	export MP_WAIT_MODE=poll
2996	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
2997	fi
2998	if [[ "$LOADLBATCH" = yes ]]
2999	then
3000	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
3001	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
3002	then
3003	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
3004	else
3005	if [[ $run_coupled_model = false ]]
3006	then
3007	if [[ "$ocean_file_appendix" = true ]]
3008	then
3009	echo "precursor_ocean" > runfile_atmos
3010	else
3011	echo "precursor_atmos" > runfile_atmos
3012	fi
3013	else
3014	(( iia = $numprocs_atmos / $threads_per_task ))
3015	(( iio = $numprocs_ocean / $threads_per_task ))
3016	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3017	printf "\n using $coupled_mode coupling"
3018	printf "\n\n"
3019	echo "coupled_run $iia $iio" > runfile_atmos
3020	fi
3021	poe ./a.out $ROPTS < runfile_atmos
3022	fi
3023	else
3024	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
3025	then
3026	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
3027	elif [[ $localhost = ibmy ]]
3028	then
3029	if [[ -f $hostfile ]]
3030	then
3031	cp $hostfile hostfile
3032	else
3033	(( ii = 1 ))
3034	while (( ii <= $numprocs ))
3035	do
3036	echo $localhost_realname >> hostfile
3037	(( ii = ii + 1 ))
3038	done
3039	fi
3040	export MP_HOSTFILE=hostfile
3041	if [[ $run_coupled_model = false ]]
3042	then
3043	if [[ "$ocean_file_appendix" = true ]]
3044	then
3045	echo "precursor_ocean" > runfile_atmos
3046	else
3047	echo "precursor_atmos" > runfile_atmos
3048	fi
3049	else
3050	(( iia = $numprocs_atmos / $threads_per_task ))
3051	(( iio = $numprocs_ocean / $threads_per_task ))
3052	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3053	printf "\n using $coupled_mode coupling"
3054	printf "\n\n"
3055	echo "coupled_run $iia $iio" > runfile_atmos
3056	fi
3057	./a.out -procs $tasks_per_node $ROPTS < runfile_atmos
3058
3059	else
3060	if [[ "$host_file" = "" ]]
3061	then
3062	printf "\n +++ no hostfile given in configuration file"
3063	locat=config_file
3064	exit
3065	else
3066	eval host_file=$host_file
3067	fi
3068	export MP_HOSTFILE=$host_file
3069	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
3070	fi
3071	fi
3072	elif [[ $host = nech \|\| $host = necriam ]]
3073	then
3074	(( ii = nodes ))
3075	if [[ $ii = 1 ]]
3076	then
3077	export F_ERRCNT=0 # acceptable number of errors before program is stopped
3078	export MPIPROGINF=YES
3079	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
3080	echo "*** execution on single node with mpirun"
3081	mpirun -np $numprocs ./a.out $ROPTS
3082	else
3083	(( i = 0 ))
3084	while (( i < ii ))
3085	do
3086	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
3087	(( i = i + 1 ))
3088	done
3089
3090	echo "#!/bin/sh" > mpi_exec_shell
3091	echo " " >> mpi_exec_shell
3092	echo "set -u" >> mpi_exec_shell
3093	echo "F_ERRCNT=0" >> mpi_exec_shell
3094	echo "MPIPROGINV=YES" >> mpi_exec_shell
3095	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
3096	echo "cpurest=$cpurest" >> mpi_exec_shell
3097	echo "fname=$fname" >> mpi_exec_shell
3098	echo "localhost=$localhost" >> mpi_exec_shell
3099	echo "return_addres=$return_addres" >> mpi_exec_shell
3100	echo "return_username=$return_username" >> mpi_exec_shell
3101	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
3102	echo "write_binary=$write_binary" >> mpi_exec_shell
3103	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
3104	echo " " >> mpi_exec_shell
3105	echo "export F_ERRCNT" >> mpi_exec_shell
3106	echo "export MPIPROGINV" >> mpi_exec_shell
3107	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
3108	echo "export cpurest" >> mpi_exec_shell
3109	echo "export fname" >> mpi_exec_shell
3110	echo "export localhost" >> mpi_exec_shell
3111	echo "export return_addres" >> mpi_exec_shell
3112	echo "export return_username" >> mpi_exec_shell
3113	echo "export tasks_per_node" >> mpi_exec_shell
3114	echo "export write_binary" >> mpi_exec_shell
3115	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
3116	echo " " >> mpi_exec_shell
3117	echo "exec ./a.out" >> mpi_exec_shell
3118
3119	chmod u+x mpi_exec_shell
3120	export MPIPROGINF=YES
3121	mpirun -f multinode_config &
3122	wait
3123
3124	fi
3125	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
3126	then
3127
3128	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
3129	# DOES NOT EXIST
3130	if [[ $host != lcsgih && $host != lcsgib ]]
3131	then
3132	if [[ -f $hostfile ]]
3133	then
3134	cp $hostfile hostfile
3135	else
3136	(( ii = 1 ))
3137	while (( ii <= $numprocs / $threads_per_task ))
3138	do
3139	echo $localhost_realname >> hostfile
3140	(( ii = ii + 1 ))
3141	done
3142	fi
3143	eval zeile=\"`head -n $ii hostfile`\"
3144	printf "\n *** running on: $zeile"
3145	fi
3146
3147	(( ii = $numprocs / $threads_per_task ))
3148	export OMP_NUM_THREADS=$threads_per_task
3149	# echo "OMP_NUM_THREADS=$OMP_NUM_THREADS"
3150	if [[ $threads_per_task != 1 ]]
3151	then
3152	printf "\n threads per task: $threads_per_task"
3153	fi
3154	if [[ $run_coupled_model = false ]]
3155	then
3156	if [[ "$ocean_file_appendix" = true ]]
3157	then
3158	echo "precursor_ocean" > runfile_atmos
3159	else
3160	echo "precursor_atmos" > runfile_atmos
3161	fi
3162	printf "\n\n"
3163	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3164	then
3165	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3166	then
3167	# MPI_DSM_DISTRIBUTE not necessary when MPI_DSM_CPULIST is set
3168	# export MPI_DSM_DISTRIBUTE=1
3169	# MPI_DSM_CPULIST: pin MPI processes to cores
3170	export MPI_DSM_CPULIST="0,1,4,5,2,3,6,7:allhosts"
3171	# MPI_IB_RAILS: use both IB rails on ICE2
3172	export MPI_BUFS_PER_HOST=512
3173	export MPI_IB_RAILS=2
3174	# NECESSARY, IF MORE THAN 4096 PEs ARE USED
3175	export MPI_CONNECTIONS_THRESHOLD=8192
3176	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
3177	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3178	then
3179	export MV2_NUM_PORTS=2
3180	export MV2_CPU_MAPPING=0,1,4,5,2,3,6,7
3181	mpiexec -np $ii ./a.out $ROPTS < runfile_atmos
3182	fi
3183	elif [[ $host = lcxt4 ]]
3184	then
3185	aprun -n $ii -N $tasks_per_node a.out $ROPTS < runfile_atmos
3186	else
3187	mpiexec -machinefile hostfile -n $ii a.out < runfile_atmos $ROPTS
3188	fi
3189	else
3190
3191	# currently there is no full MPI-2 support on ICE and XT4
3192	(( iia = $numprocs_atmos / $threads_per_task ))
3193	(( iio = $numprocs_ocean / $threads_per_task ))
3194	printf "\n coupled run ($iia atmosphere, $iio ocean)"
3195	printf "\n using $coupled_mode coupling"
3196	printf "\n\n"
3197
3198	if [[ $coupled_mode = "mpi2" ]]
3199	then
3200	echo "atmosphere_to_ocean $iia $iio" > runfile_atmos
3201	echo "ocean_to_atmosphere $iia $iio" > runfile_ocean
3202	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3203	then
3204
3205	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3206	then
3207	# export MPI_LAUNCH_TIMEOUT=360
3208	mpiexec_mpt -np $iia ./a.out $ROPTS < runfile_atmos &
3209	mpiexec_mpt -np $iio ./a.out $ROPTS < runfile_ocean &
3210	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3211	then
3212	# ulimit -s 300000 # A too large stack size causes problems
3213	# export MV2_NUM_PORTS=2
3214	# export MV2_CPU_MAPPING=0:1:2:3
3215	mpiexec -n $iia ./a.out $ROPTS < runfile_atmos &
3216	mpiexec -n $iio ./a.out $ROPTS < runfile_ocean &
3217	fi
3218
3219	elif [[ $host = lcxt4 ]]
3220	then
3221
3222	aprun -n $iia -N $tasks_per_node a.out < runfile_atmos $ROPTS &
3223	aprun -n $iio -N $tasks_per_node a.out < runfile_ocean $ROPTS &
3224
3225	else
3226	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
3227	mpiexec -machinefile hostfile -n $iia a.out $ROPTS < runfile_atmos &
3228	mpiexec -machinefile hostfile -n $iio a.out $ROPTS < runfile_ocean &
3229	# mpiexec -machinefile hostfile -n $iia -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
3230	# mpiexec -machinefile hostfile -n $iio -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
3231	fi
3232	wait
3233
3234	else
3235
3236	echo "coupled_run $iia $iio" > runfile_atmos
3237	if [[ $host = lcsgih \|\| $host = lcsgib ]]
3238	then
3239
3240	if [[ $( echo $mpilib \| cut -c1-3 ) = mpt ]]
3241	then
3242	# export MPI_LAUNCH_TIMEOUT=360
3243	mpiexec_mpt -np $ii ./a.out $ROPTS < runfile_atmos
3244	elif [[ $( echo $mpilib \| cut -c1-3 ) = mva ]]
3245	then
3246	# ulimit -s 300000 # A too large stack size causes problems
3247	# export MV2_NUM_PORTS=2
3248	# export MV2_CPU_MAPPING=0:1:2:3
3249	mpiexec ./a.out $ROPTS < runfile_atmos
3250	fi
3251
3252	elif [[ $host = lcxt4 ]]
3253	then
3254
3255	aprun -n $ii -N $tasks_per_node a.out < runfile_atmos $ROPTS
3256
3257	elif [[ $host = lck ]]
3258	then
3259	mpiexec -n $ii ./a.out $ROPTS < runfile_atmos &
3260	fi
3261	wait
3262	fi
3263
3264	# if [[ $scirocco = true ]]
3265	# then
3266	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
3267	# else
3268	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
3269	# fi
3270	fi
3271	elif [[ $host = decalpha ]]
3272	then
3273	dmpirun -np $numprocs a.out $ROPTS
3274	elif [[ $host = lctit ]]
3275	then
3276	export runfile=runfile.$kennung
3277
3278	echo "cd $PWD" > $runfile
3279	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
3280	echo "export cpurest=$cpurest" >> $runfile
3281	echo "export fname=$fname" >> $runfile
3282	echo "export localhost=$localhost" >> $runfile
3283	echo "export return_addres=$return_addres" >> $runfile
3284	echo "export return_username=$return_username" >> $runfile
3285	echo "export tasks_per_node=$tasks_per_node" >> $runfile
3286	echo "export write_binary=$write_binary" >> $runfile
3287	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
3288	echo "./a.out" >> $runfile
3289	chmod u+x $runfile
3290
3291	if [[ "$QUEUE" = interactive ]]
3292	then
3293	mpirun -np $numprocs a.out $ROPTS
3294	else
3295	(( mem_tsubame = $memory / 1024.0 ))
3296	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
3297	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
3298	# /n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3299	n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
3300	fi
3301
3302	rm $runfile
3303	else
3304	mpprun -n $numprocs a.out $ROPTS
3305	fi
3306	[[ $? != 0 ]] && execution_error=true
3307
3308
3309	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
3310	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
3311	then
3312	apprentice
3313	fi
3314	else
3315	a.out $ROPTS
3316	fi
3317	fi
3318	if [[ $? != 0 \|\| $execution_error = true ]]
3319	then
3320
3321	# ABBRUCH BEI LAUFZEITFEHLER
3322	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3323	printf "\n +++ runtime error occured"
3324	locat=execution
3325	exit
3326	else
3327	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
3328	printf "\n$striche\n *** execution finished \n"
3329
3330	# Stop the dvr streaming server and process the dvr output in order
3331	# to create dvrs- and html-files containing all streams
3332	if [[ "$dvrserver_id" != "" ]]
3333	then
3334	kill $dvrserver_id
3335	printf "\n *** dvr server with id=$dvrserver_id has been stopped"
3336
3337	# If there is a directory, data have been output by the
3338	# streaming server. Otherwise, user has chosen dvrp_output=local
3339	if [[ -d DATA_DVR ]]
3340	then
3341
3342	# Add the current dvr configuration file to the dvr output
3343	# directory
3344	cp .dvrserver.config DATA_DVR
3345
3346	# Process the dvr output (option -s for also generating
3347	# sequence mode data)
3348	process_dvr_output -d DATA_DVR -f $fname -s
3349
3350	else
3351
3352	# Process the local output
3353	process_dvr_output -l -d DATA_DVR -f $fname
3354
3355	fi
3356
3357	elif [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
3358	then
3359
3360	# Process dvr output generated in local mode (dvrp_output=local)
3361	process_dvr_output -l -d DATA_DVR -f $fname
3362
3363	fi
3364	fi
3365
3366
3367
3368	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
3369	(( i = 0 ))
3370	while (( i < ioc ))
3371	do
3372	(( i = i + 1 ))
3373	if (( i == 1 ))
3374	then
3375	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
3376	fi
3377	printf "\n >>> ${out_command[$i]}"
3378	eval ${out_command[$i]}
3379	if (( i == ioc ))
3380	then
3381	printf "\n$striche\n"
3382	fi
3383	done
3384
3385
3386	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
3387	if [[ $do_trace = true ]]
3388	then
3389	printf "\n\n"
3390	ls -al
3391	fi
3392
3393
3394
3395	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
3396	(( i = 0 ))
3397	while (( i < iout ))
3398	do
3399	(( i = i + 1 ))
3400	if (( i == 1 ))
3401	then
3402	printf "\n\n *** saving OUTPUT-files:\n$striche"
3403	fi
3404
3405	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
3406	files_for_pes=false; filetyp=file
3407	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
3408	then
3409	files_for_pes=true; filetyp=directory
3410	actionout[$i]=""
3411	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
3412	then
3413	actionout[$i]=""
3414	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
3415	then
3416	files_for_pes=true; filetyp=directory
3417	actionout[$i]="ar"
3418	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
3419	then
3420	actionout[$i]="ar"
3421	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
3422	then
3423	files_for_pes=true; filetyp=directory
3424	actionout[$i]="fl"
3425	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
3426	then
3427	actionout[$i]="fl"
3428	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
3429	then
3430	files_for_pes=true; filetyp=directory
3431	actionout[$i]="tr"
3432	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
3433	then
3434	actionout[$i]="tr"
3435	fi
3436
3437	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
3438	then
3439	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
3440	elif [[ ! -d ${localout[$i]} && $files_for_pes = true ]]
3441	then
3442	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
3443	else
3444
3445
3446	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3447	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3448	# REMOTE-RECHNUNGEN
3449	if [[ "${actionout[$i]}" = tr ]]
3450	then
3451	if [[ $localhost != $fromhost ]]
3452	then
3453	if [[ $files_for_pes = false ]]
3454	then
3455	cps=""
3456	cst=""
3457	else
3458	cps=-c
3459	cst="/"
3460	fi
3461	if [[ $localhost = ibmb \|\| $localhost = nech ]]
3462	then
3463
3464	# TRANSFER IN EIGENSTAENDIGEM JOB
3465	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3466	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3467	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3468	if [[ $files_for_pes = false ]]
3469	then
3470	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3471	else
3472	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
3473	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
3474	fi
3475
3476	echo "set -x" > transfer_${localout[$i]}
3477	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3478
3479	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
3480	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
3481	printf "\n or higher cycle\n"
3482	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3483
3484	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3485
3486	if [[ $localhost = nech ]]
3487	then
3488	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3489	else
3490	if [[ "$LOGNAME" = b323013 ]]
3491	then
3492	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3493	else
3494	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3495	fi
3496	fi
3497
3498	else
3499
3500	# TRANSFER INNERHALB DIESES JOBS
3501	transfer_failed=false
3502	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
3503	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
3504	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3505	[[ $? != 0 ]] && transfer_failed=true
3506
3507	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3508	# LOKALER MASCHINE ANLEGEN
3509	if [[ $transfer_failed = true ]]
3510	then
3511	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3512	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3513
3514	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3515	# ANLEGEN.
3516	eval local_catalog=${pathout[$i]}
3517	if [[ ! -d $local_catalog ]]
3518	then
3519	printf " *** local directory does not exist. Trying to create:\n"
3520	printf " $local_catalog \n"
3521	mkdir -p $local_catalog
3522	fi
3523	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3524	transfer_problems=true
3525	fi
3526	fi
3527	else
3528
3529	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
3530	actionout[$i]=""
3531	fi
3532	fi
3533
3534
3535	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
3536	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
3537	# REMOTE-RECHNUNGEN
3538	if [[ "${actionout[$i]}" = tra ]]
3539	then
3540	if [[ $localhost != $fromhost ]]
3541	then
3542	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
3543	then
3544
3545	# TRANSFER IN EIGENSTAENDIGEM JOB
3546	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
3547	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
3548	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
3549	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
3550
3551	echo "set -x" > transfer_${localout[$i]}
3552	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
3553
3554	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
3555	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
3556	printf "\n or higher cycle\n"
3557	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
3558
3559	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
3560
3561	if [[ $localhost = nech ]]
3562	then
3563	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
3564	else
3565	if [[ $LOGNAME = b323013 ]]
3566	then
3567	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3568	else
3569	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
3570	fi
3571	fi
3572
3573	else
3574
3575	# TRANSFER INNERHALB DIESES JOBS
3576	transfer_failed=false
3577	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
3578	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
3579	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
3580	[[ $? != 0 ]] && transfer_failed=true
3581
3582	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
3583	# LOKALER MASCHINE ANLEGEN
3584	if [[ $transfer_failed = true ]]
3585	then
3586	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
3587	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
3588
3589	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
3590	# ANLEGEN
3591	eval local_catalog=${pathout[$i]}
3592	if [[ ! -d $local_catalog ]]
3593	then
3594	printf " *** local directory does not exist. Trying to create:\n"
3595	printf " $local_catalog \n"
3596	mkdir -p $local_catalog
3597	fi
3598
3599	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
3600	transfer_problems=true
3601	fi
3602	fi
3603	else
3604
3605	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
3606	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
3607	actionout[$i]=a
3608	fi
3609	fi
3610
3611
3612	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
3613	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
3614	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
3615	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
3616	if [[ "${actionout[$i]}" = fl ]]
3617	then
3618	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3619	chmod g+rx $tmp_data_catalog
3620	if [[ $files_for_pes = false ]]
3621	then
3622	printf "\n >>> OUTPUT: ${localout[$i]} to"
3623	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3624	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
3625	else
3626	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
3627	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
3628	mkdir $tmp_data_catalog/${frelout[$i]}
3629	cd ${localout[$i]}
3630	for file in $(ls *)
3631	do
3632	ln -f $file $tmp_data_catalog/${frelout[$i]}
3633	done
3634	cd $TEMPDIR
3635	fi
3636
3637
3638	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
3639	if [[ $store_on_archive_system = true ]]
3640	then
3641
3642	if [[ $archive_system = asterix ]]
3643	then
3644	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3645	if [[ $files_for_pes = false ]]
3646	then
3647	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3648	else
3649	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3650	fi
3651	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3652	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
3653	echo "then" >> archive_${frelout[$i]}
3654	echo " do_stageout=false" >> archive_${frelout[$i]}
3655	echo "else" >> archive_${frelout[$i]}
3656	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
3657	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
3658	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
3659	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
3660	if [[ $files_for_pes = false ]]
3661	then
3662	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
3663	else
3664	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
3665	fi
3666	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
3667	echo "fi" >> archive_${frelout[$i]}
3668	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
3669	elif [[ $archive_system = DMF ]]
3670	then
3671	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3672	if [[ $files_for_pes = false ]]
3673	then
3674	printf "\n +++ archiving of single files impossible with $archive_system !\n"
3675	locat=DMF
3676	exit
3677	else
3678	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
3679	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
3680	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
3681	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
3682	fi
3683	elif [[ $archive_system = tivoli ]]
3684	then
3685	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3686	if [[ $files_for_pes = false ]]
3687	then
3688	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3689	echo "set -x" >> archive_${frelout[$i]}
3690	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3691	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3692	else
3693
3694	echo "set -x" >> archive_${frelout[$i]}
3695	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
3696	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3697	cd $tmp_data_catalog
3698	all_files=`ls -1 ${frelout[$i]}/*`
3699	cd - > /dev/null
3700	(( inode = 0 ))
3701	(( tp1 = tasks_per_node + 1 ))
3702	while (( inode < nodes ))
3703	do
3704	# echo "*** all_files = \"$all_files\" "
3705	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3706	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3707	# echo "*** tasks_per_node = \"$tasks_per_node\" "
3708	# echo "*** files = \"$files\" "
3709	# echo "*** all_files = \"$all_files\" "
3710	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3711	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3712	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
3713	(( inode = inode + 1 ))
3714	done
3715	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3716	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3717	fi
3718	elif [[ $archive_system = ut ]]
3719	then
3720	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
3721	if [[ $files_for_pes = false ]]
3722	then
3723	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3724	echo "set -x" >> archive_${frelout[$i]}
3725	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3726	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3727	else
3728
3729	echo "set -x" >> archive_${frelout[$i]}
3730	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
3731	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
3732	cd $tmp_data_catalog
3733	all_files=`ls -1 ${frelout[$i]}/*`
3734	cd - > /dev/null
3735	(( inode = 0 ))
3736	(( tp1 = tasks_per_node + 1 ))
3737	while (( inode < nodes ))
3738	do
3739	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
3740	all_files=`echo $all_files \| cut -d" " -f$tp1-`
3741	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
3742	(( inode = inode + 1 ))
3743	done
3744	fi
3745	elif [[ $archive_system = none ]]
3746	then
3747	printf " +++ archiving on $localhost not available!\n"
3748	fi
3749
3750	if [[ $archive_system != none ]]
3751	then
3752	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
3753	then
3754	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3755	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3756	elif [[ $localhost = nech ]]
3757	then
3758	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3759	fi
3760	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3761	fi
3762	else
3763	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
3764	fi
3765
3766
3767	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
3768	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3769	if [[ $files_for_pes = false ]]
3770	then
3771	cat /dev/null > ${pathout[$i]}
3772	else
3773	mkdir -p ${pathout[$i]}
3774	fi
3775
3776	fi
3777
3778
3779	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
3780	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
3781	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
3782	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
3783	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
3784	# GEMAESSEN ARCHIVIERUNGEN GESETZT
3785	if [[ "${actionout[$i]}" = ar ]]
3786	then
3787	if [[ $files_for_pes = false ]]
3788	then
3789	printf "\n >>> OUTPUT: ${localout[$i]} to"
3790	printf "\n ${pathout[$i]}"
3791	printf "\n File will be copied to archive-system ($archive_system) !\n"
3792	else
3793	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
3794	printf "\n ${pathout[$i]}"
3795	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
3796	fi
3797	mv ${localout[$i]} ${frelout[$i]}
3798
3799	file_saved=false
3800
3801	if [[ $archive_system = asterix ]]
3802	then
3803	do_stageout=true
3804	(( stageout_anz = 0 ))
3805	while [[ $do_stageout = true ]]
3806	do
3807	if [[ $files_for_pes = false ]]
3808	then
3809	stageout ${frelout[$i]} > STAGE_OUTPUT
3810	else
3811	stageout -t ${frelout[$i]} > STAGE_OUTPUT
3812	fi
3813	cat STAGE_OUTPUT
3814	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
3815	then
3816	file_saved=true
3817	do_stageout=false
3818	else
3819	if [[ $files_for_pes = false ]]
3820	then
3821	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
3822	else
3823	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
3824	fi
3825	(( stageout_anz = stageout_anz + 1 ))
3826	if (( stageout_anz == 10 ))
3827	then
3828	printf "\n +++ stoped after 10 unsuccessful tries!"
3829	archive_save=false
3830	do_stageout=false
3831	else
3832	printf "\n *** new try to store on archive after 15 min:"
3833	sleep 900
3834	fi
3835	fi
3836	done
3837	elif [[ $archive_system = DMF ]]
3838	then
3839	if [[ $files_for_pes = false ]]
3840	then
3841	printf "\n +++ archiving of single files impossible on $archive_system!\n"
3842	locat=DMF
3843	exit
3844	else
3845	rm -rf $ARCHIVE/${frelout[$i]}
3846	cp -r ${frelout[$i]} $ARCHIVE
3847	fi
3848	file_saved=true
3849	elif [[ $archive_system = tivoli ]]
3850	then
3851	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3852	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3853	# GELEGT WERDEN
3854	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3855	chmod g+rx $tmp_data_catalog
3856	if [[ $files_for_pes = false ]]
3857	then
3858	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3859	else
3860	mkdir $tmp_data_catalog/${frelout[$i]}
3861	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3862	fi
3863
3864	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3865	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3866	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3867	if [[ $files_for_pes = false ]]
3868	then
3869	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3870	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3871	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
3872	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3873	else
3874	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3875	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3876	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3877	fi
3878
3879	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
3880	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3881	file_saved=true
3882
3883	elif [[ $archive_system = ut ]]
3884	then
3885	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
3886	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
3887	# GELEGT WERDEN
3888	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
3889	chmod g+rx $tmp_data_catalog
3890	if [[ $files_for_pes = false ]]
3891	then
3892	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
3893	else
3894	mkdir $tmp_data_catalog/${frelout[$i]}
3895	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
3896	fi
3897
3898	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
3899	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
3900	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
3901	if [[ $files_for_pes = false ]]
3902	then
3903	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
3904	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3905	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
3906	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3907	else
3908	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
3909	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
3910	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
3911	fi
3912
3913	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
3914	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
3915	file_saved=true
3916
3917	else
3918	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
3919	archive_save=false
3920	fi
3921	if [[ $file_saved = true ]]
3922	then
3923	if [[ $files_for_pes = false ]]
3924	then
3925	cat /dev/null > ${pathout[$i]}
3926	else
3927	mkdir -p ${pathout[$i]}
3928	fi
3929	fi
3930	fi
3931
3932	# APPEND AUF LOKALER MASCHINE
3933	if [[ "${actionout[$i]}" = "a" ]]
3934	then
3935	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
3936	cat ${localout[$i]} >> ${pathout[$i]}
3937	fi
3938
3939	# KOPIEREN AUF LOKALER MASCHINE
3940	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
3941	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
3942	then
3943
3944	# KOPIEREN AUF EINPROZESSORMASCHINE
3945	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
3946	then
3947	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
3948	if [[ $link_local_output = true ]]
3949	then
3950	printf " using ln -f\n"
3951	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3952	fi
3953	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3954	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
3955	then
3956	if [[ $link_local_output = true ]]
3957	then
3958	printf " ln failed, using cp...\n"
3959	fi
3960	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
3961	fi
3962	else
3963	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
3964	if [[ $link_local_output = true ]]
3965	then
3966	printf " using ln -f\n"
3967	ln -f ${localout[$i]} ${pathout[$i]}
3968	fi
3969	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
3970	if [[ ! -f "${pathout[$i]}" ]]
3971	then
3972	if [[ $link_local_output = true ]]
3973	then
3974	printf " ln failed, using cp...\n"
3975	fi
3976	cp ${localout[$i]} ${pathout[$i]}
3977	fi
3978	fi
3979
3980	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
3981	then
3982
3983	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
3984	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
3985	# WIRD DANN KOPIERT
3986	# PER MOVE UMBENANNT WERDEN
3987	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
3988	if [[ $link_local_output = true ]]
3989	then
3990	printf " using ln -f\n"
3991	mkdir ${pathout[$i]}
3992	cd ${localout[$i]}
3993	for file in $(ls *)
3994	do
3995	ln -f $file ${pathout[$i]}
3996	done
3997	cd $TEMPDIR
3998	fi
3999	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
4000	if [[ ! -f "${pathout[$i]}/_0000" ]]
4001	then
4002	if [[ $link_local_output = true ]]
4003	then
4004	printf " ln failed for .../_0000, using cp...\n"
4005	fi
4006	cp -r ${localout[$i]} ${pathout[$i]}
4007	fi
4008
4009	fi
4010	fi
4011	done
4012	if (( i != 0 ))
4013	then
4014	if [[ $transfer_problems = true ]]
4015	then
4016	printf "\n$striche\n *** OUTPUT-files saved"
4017	printf "\n +++ WARNING: some data transfers failed! \n"
4018	else
4019	printf "\n$striche\n *** all OUTPUT-files saved \n"
4020	fi
4021	fi
4022
4023
4024	# EVENTUELL FOLGEJOB STARTEN
4025	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
4026	if [[ -f CONTINUE_RUN ]]
4027	then
4028
4029	if [[ $archive_save = true ]]
4030	then
4031
4032	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
4033	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
4034	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
4035	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
4036	# HANDEN
4037	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
4038	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
4039	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
4040	if [[ $(echo $mc \| grep -c "#") != 0 ]]
4041	then
4042	mc=`echo $mc \| sed 's/#/f/g'`
4043	fi
4044
4045
4046	# JOB STARTEN
4047	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
4048	echo " $mc"
4049	printf "\n$striche\n"
4050	if [[ $localhost != $fromhost ]]
4051	then
4052
4053	if [[ $localhost = lcsgih \|\| $localhost = lcsgib \|\| $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
4054	then
4055	echo "*** ssh will be used to initiate restart-runs!"
4056	echo " return_addres=\"$return_addres\" "
4057	echo " return_username=\"$return_username\" "
4058	if [[ $return_addres = 172.20.25.41 ]]
4059	then
4060	# WORKAROUND AUF SCIROCCO AM TIT
4061	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
4062	elif [[ $(echo $return_addres \| grep -c "130.75.105") = 1 ]]
4063	then
4064	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export LD_LIBRARY_PATH=\$LD_LIBRARY_PATH:/muksoft/packages/intel/Compiler/11.0/083/lib/intel64/;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4065	else
4066	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4067	fi
4068	else
4069	printf "\n +++ no restart mechanism available for host \"$localhost\" "
4070	locat=restart; exit
4071	fi
4072
4073	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
4074	# DER AKTUELLE JOB ENDET
4075	sleep 30
4076
4077	else
4078
4079	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
4080	# RUFEN WERDEN, AUSSER AUF lcfimm
4081	cd $LOCAL_PWD
4082	if [[ $localhost = lcfimm ]]
4083	then
4084	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
4085	else
4086	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
4087	fi
4088	cd - > /dev/null
4089	fi
4090	printf "\n$striche\n *** restart-run initiated \n"
4091
4092
4093	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
4094	# GEHOLT WORDEN SIND, LOESCHEN
4095	(( i = 0 ))
4096	while (( i < iin ))
4097	do
4098	(( i = i + 1 ))
4099	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
4100	then
4101	rm -r $tmp_data_catalog/${frelin[$i]}
4102	fi
4103	done
4104
4105	else
4106
4107	printf "\n +++ no restart-run possible, since errors occured"
4108	printf "\n during the archive process"
4109	fi
4110
4111	fi
4112
4113
4114
4115	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
4116	if [[ "$email_notification" != "none" ]]
4117	then
4118
4119	if [[ $localhost != $fromhost ]]
4120	then
4121	if [[ -f CONTINUE_RUN ]]
4122	then
4123	echo "PALM restart run necessary" > email_text
4124	echo "description header of actual run:" >> email_text
4125	cat CONTINUE_RUN >> email_text
4126	echo "mrun-command to restart:" >> email_text
4127	echo "$mc" >> email_text
4128	else
4129	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
4130	fi
4131	mail $email_notification < email_text
4132	printf "\n *** email notification sent to \"$email_notification\" "
4133	fi
4134	fi
4135
4136
4137
4138	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
4139	cd $HOME
4140	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
4141
4142	else
4143
4144
4145	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
4146	# CHENDE AKTIONEN DURCHGEFUEHRT
4147
4148	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
4149	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
4150	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
4151	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
4152	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
4153	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
4154	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
4155	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
4156	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
4157	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
4158	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
4159	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
4160	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
4161	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
4162	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
4163	if [[ $use_openmp = true ]]
4164	then
4165	mrun_com=${mrun_com}" -O"
4166	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
4167	else
4168	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
4169	fi
4170	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
4171	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
4172	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
4173	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
4174	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
4175	[[ "$ocean_file_appendix" = true ]] && mrun_com=${mrun_com}" -y"
4176	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y \"$coupled_dist\""
4177	if [[ $do_remote = true ]]
4178	then
4179	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
4180	fi
4181
4182
4183	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
4184	jobfile=jobfile.$RANDOM
4185
4186
4187	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
4188	echo "mkdir $TEMPDIR" >> $jobfile
4189	echo "cd $TEMPDIR" >> $jobfile
4190
4191
4192	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
4193	if [[ $do_trace = true ]]
4194	then
4195	echo "set -x" >> $jobfile
4196	else
4197	echo "set +vx" >> $jobfile
4198	fi
4199
4200
4201	# BEREITSTELLUNG VON QUELLTEXTEN, MRUN-SCRIPTS UND KONFIGURATIONS-
4202	# DATEI FUER DEN JOB
4203	if [[ $( echo $host \| cut -c1-5 ) = lcsgi ]]
4204	then
4205
4206	# KONFIGURATIONSDATEI UND MRUN_SCRIPT IN DAS SOURCE-VERZEICHNIS
4207	# KOPIEREN
4208	if [[ $restart_run != true ]]
4209	then
4210	cp $config_file $working_directory/SOURCES_FOR_RUN_$fname
4211	cp ${PALM_BIN}/$mrun_script_name $working_directory/SOURCES_FOR_RUN_$fname
4212	fi
4213
4214	# SOURCE-VERZEICHNIS VOM LOKALEN RECHNER PER SCP TRANSFERIEREN
4215	echo "set -x" >> $jobfile
4216	echo "scp -r $return_username@$return_addres:$working_directory/SOURCES_FOR_RUN_$fname ." >> $jobfile
4217	echo "export SOURCES_COMPLETE=true" >> $jobfile
4218
4219	# QUELLTEXTE, MRUN-SCRIPT UND KONFIGURATIONSDATEI IN DAS AKTUELLE
4220	# ARBEITSVERZEICHNIS VERSCHIEBEN
4221	echo "mv SOURCES_FOR_RUN_$fname/$config_file . " >> $jobfile
4222	echo "mv SOURCES_FOR_RUN_$fname/$mrun_script_name . " >> $jobfile
4223	echo "execute_mrun=true" >> $jobfile
4224	echo " " >> $jobfile
4225
4226	else
4227
4228	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
4229	# SOWIE GEGEBENENFALLS DES MAKEFILES
4230	if [[ $do_compile = true ]]
4231	then
4232
4233	source_catalog=SOURCES_FOR_RUN_$fname
4234
4235	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
4236	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
4237	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
4238	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
4239	echo "export SOURCES_COMPLETE=true" >> $jobfile
4240	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
4241
4242	for filename in $source_list
4243	do
4244	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4245	echo "cat > $filename << \"%END%\"" >> $jobfile
4246	cat $source_catalog/$filename >> $jobfile
4247	echo " " >> $jobfile
4248	echo "%END%" >> $jobfile
4249	echo " " >> $jobfile
4250	done
4251
4252	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4253	echo "cat > Makefile << \"%END%\"" >> $jobfile
4254	cat $source_catalog/Makefile >> $jobfile
4255	echo " " >> $jobfile
4256	echo "%END%" >> $jobfile
4257	echo " " >> $jobfile
4258
4259	echo "cd - > /dev/null" >> $jobfile
4260
4261	fi
4262
4263
4264	# ABSPEICHERN DER KONFIGURATIONSDATEI
4265	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4266	echo "cat > $config_file << \"%END%\"" >> $jobfile
4267	cat $config_file >> $jobfile
4268	echo "%END%" >> $jobfile
4269	echo " " >> $jobfile
4270
4271
4272	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
4273	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
4274	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
4275	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
4276	echo "%END%" >> $jobfile
4277	if [[ $host = lctit ]]
4278	then
4279	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
4280	echo "mv mrun_new $mrun_script_name" >> $jobfile
4281	fi
4282	echo "chmod u+x $mrun_script_name" >> $jobfile
4283	echo "execute_mrun=true" >> $jobfile
4284	echo " " >> $jobfile
4285
4286	fi
4287
4288
4289	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
4290	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
4291	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
4292	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
4293	if [[ $do_remote = true ]]
4294	then
4295	(( i = 0 ))
4296	while (( i < iin ))
4297	do
4298	(( i = i + 1 ))
4299	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
4300	if [[ "${transin[$i]}" = job ]]
4301	then
4302	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
4303	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
4304	echo " " >> $jobfile
4305	echo "%END%" >> $jobfile
4306	else
4307	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
4308	fi
4309
4310	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
4311	echo "if [[ \$? = 1 ]]" >> $jobfile
4312	echo "then" >> $jobfile
4313	echo " echo \" \" " >> $jobfile
4314	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
4315	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
4316	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
4317	echo " execute_mrun=false" >> $jobfile
4318	echo "fi" >> $jobfile
4319	done
4320	fi
4321
4322	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
4323	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
4324	echo "LOCAL_PWD=$working_directory" >> $jobfile
4325	echo "export LOCAL_PWD" >> $jobfile
4326
4327	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
4328	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
4329	echo "export LOCAL_MRUN_PATH" >> $jobfile
4330
4331	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
4332	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
4333	then
4334	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
4335	fi
4336
4337	# MRUN AUF ZIELRECHNER AUFRUFEN
4338	echo "set -x" >> $jobfile
4339	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
4340
4341	echo 'ls -al; echo `pwd`' >> $jobfile
4342	echo "cd \$HOME" >> $jobfile
4343	echo "rm -rf $TEMPDIR" >> $jobfile
4344
4345
4346
4347
4348	# JOB PER SUBJOB STARTEN
4349	if [[ $silent = false ]]
4350	then
4351	printf "\n "
4352	else
4353	printf "\n\n"
4354	fi
4355
4356	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog -e $email_notification $jobfile
4357	rm -rf $jobfile
4358
4359
4360	fi # ENDE REMOTE-TEIL
4361
4362
4363
4364	# ENDE DER PROZEDUR

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