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mrun @ 99

Last change on this file since 99 was 97, checked in by raasch, 18 years ago

New:
---
ocean version including prognostic equation for salinity and equation of state for seawater. Routine buoyancy can be used with both temperature and density.
+ inipar-parameters bc_sa_t, bottom_salinityflux, ocean, sa_surface, sa_vertical_gradient, sa_vertical_gradient_level, top_salinityflux

advec_s_bc, average_3d_data, boundary_conds, buoyancy, check_parameters, data_output_2d, data_output_3d, diffusion_e, flow_statistics, header, init_grid, init_3d_model, modules, netcdf, parin, production_e, prognostic_equations, read_var_list, sum_up_3d_data, swap_timelevel, time_integration, user_interface, write_var_list, write_3d_binary

New:
eqn_state_seawater, init_ocean

Changed:

inipar-parameter use_pt_reference renamed use_reference

hydro_press renamed hyp, routine calc_mean_pt_profile renamed calc_mean_profile

format adjustments for the ocean version (run_control)

advec_particles, buoyancy, calc_liquid_water_content, check_parameters, diffusion_e, diffusivities, header, init_cloud_physics, modules, production_e, prognostic_equations, run_control

Errors:

Bugfix: height above topography instead of height above level k=0 is used for calculating the mixing length (diffusion_e and diffusivities).

Bugfix: error in boundary condition for TKE removed (advec_s_bc)

advec_s_bc, diffusion_e, prognostic_equations

Property svn:keywords set to Rev

File size: 137.2 KB

Rev	Line
[71]	1	#!/bin/ksh
[66]	2	# mrun - Plot-Shellskript
	3	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
[1]	4
	5	# Prozedur zum Starten von Modellaeufen
	6
	7	# letzte Aenderung:
	8	# 03/03/94 - Siggi - Entwicklungsbeginn
	9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	11	# zelne Variable exportiert. Dies ist noetig, weil an-
	12	# sonsten irgendein Speicher ueberlaeuft und von mrun
	13	# aufgerufene Programme (z.B. stageout) mit Fehlern
	14	# abbrechen (too many arguments)
	15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	16	# defaultmaessig im RRZN-Profile eingeschaltet
	17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	18	# wegfallen
	19	# 25/04/00 - Siggi - Version 1.5
	20	# remote_addres und remote_user in return_addres bzw.
	21	# return_username umbenannt, return_username wird dem
	22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	23	# Neue Variable remote_username, die beim interaktiven
	24	# mrun-Aufruf zwingend ueber die neue Option -u oder
	25	# in der Konfigurationsdatei angegeben werden muss.
	26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	27	# Version 1.7
	28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	31	# zu bestimmen; Praeprozessoroptionen haben nun alle
	32	# die Form -Dtext=text, weil auf IBM sonst text durch
	33	# die leere Zeichenkette ersetzt wird
	34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	36	# (-D$OMP=OMP) in order to avoid problems with
	37	# OMP_NUM_THREADS
	38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	39	# tar files, one for each node used
	40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	42	# 17/01/05 - Siggi - job for data transfer to local machine now within
	43	# job class c1 (HLRN)
	44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	46	# base filename and cycle number
	47	# 16/02/05 - Gerald - hababai validated
	48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	49	# 29/03/05 - Marcus - berni*-en0 validated
	50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	51	# 24/04/05 - Siggi - netcdf support on lcmuk
	52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	54	# number) can now be used within interactive runs
	55	# 12/05/05 - Siggi - netcdf support on ibm
	56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	57	# 18/05/05 - Siggi - netcdf support on nec
	58	# 24/05/05 - Siggi - netcdf support on ibms
	59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	60	# to 30 seconds
	61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	62	# PATH is temporarily set)
	63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	64	# caused warnings in the job protocol
	65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	67	# removed
	68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	69	# realized by file attribute trpe
	70	# 28/10/05 - Siggi - if existing, the file extension is output in case
	71	# of missing input file - no job abort in case of
	72	# missing input files with file extensions
	73	# (preliminary solution)
	74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	76	# 07/12/05 - Siggi - gallego and elephanta admitted
	77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	79	# 20/01/06 - Siggi - cpp directive for ibmy
	80	# 09/02/06 - Siggi - ibmy admitted for batch mode
	81	# 13/04/06 - Siggi - ostria admitted
	82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	84	# optimization of OpenMP runs (option stacksize is
	85	# necessary for large gridpoint numbers because
	86	# otherwise a segmentation fault occurs)
	87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	90	# 20/09/06 - Marcus - add DVRP library on nech
	91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	92	# on local NAMELIST file ENVPAR
	93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	95	# 06/02/07 - Siggi - add DVRP library on lcmuk
	96	# 07/02/07 - Siggi - revision of source code handling, source code is
	97	# now expected in directory given by source_path and
	98	# not in the current working directory, source code
	99	# files provided in add_source_path are allways
	100	# compiled, source code to be compiled is allways
	101	# sampled in SOURCES_FOR_RUN_$fname which is a
	102	# subdirectory of the current working directory,
[5]	103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	104	# adapted for RIAM (neck)
[5]	105	# bugfix for cycle number of output file (extout)
	106	# all hpmuk-related code removed
[14]	107	# 14/02/07 - Siggi - dvrp support for neck added
[21]	108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	109	# mrun_path replaced by PALM_BIN,
	110	# all machines are calling interpret_config.x
[66]	111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	112	# output
[69]	113	# 16/03/07 - Siggi - adjustments for lctit
[78]	114	# 29/03/07 - Siggi - global revision transfered to batch job by new
	115	# option -G
[82]	116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	117	# + netcdf/dvrp-options are read from configuration
	118	# file, host identifier (local_host) is read from
	119	# config file, code related to ftp filetransfer
	120	# removed (incl. option -f)
[97]	121	# 19/06/07 - Siggi - time limit for cdata jobs increased
[1]	122
	123
	124
	125
	126	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	127
	128	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	129	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	130	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	131
	132	AddFilenames=""
	133	additional_conditions=""
	134	add_source_path=""
	135	afname=""
	136	archive_save=true
	137	archive_system=none
	138	compiler_name=""
	139	cond1=""
	140	cond2=""
	141	config_file=.mrun.config
	142	cpp_opts=""
[82]	143	cpp_options=""
[1]	144	cpumax=0
	145	cpurest=0
	146	delete_temporary_catalog=true
	147	do_batch=false
	148	do_compile=true
	149	do_remote=false
	150	do_stagein=true
	151	do_stageout=true
	152	do_trace=false
	153	email_notification=""
	154	exclude=""
	155	executable=""
	156	execution_error=false
[67]	157	fimm=false
[1]	158	fname=test
	159	fromhost=""
[78]	160	global_revision=""
[1]	161	host=""
	162	host_file=""
	163	hp=""
	164	ignore_archive_error=false
	165	input_list=""
	166	interpreted_config_file=""
	167	job_on_file=""
	168	keep_data_from_previous_run=false
	169	localhost_realname=$(hostname)
	170	local_compile=false
	171	locat=normal
	172	mainprog=""
	173	makefile=""
	174	mc=$0
	175	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	176	do
	177	mc=`echo $mc \| cut -f2- -d"/"`
	178	done
	179	module_files=""
	180	mrun_script_name=$mc
[82]	181	netcdf_inc=""
	182	netcdf_lib=""
[1]	183	netcdf_support=false
	184	node_usage=default
	185	numprocs=""
	186	OOPT=""
	187	openmp=false
	188	output_list=""
	189	package_list=""
	190	punkte="..........................................................."
	191	queue=none
	192	read_from_config=""
[5]	193	restart_run=false
[74]	194	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	195	if [[ $return_addres = 130.75.105.158 ]]
	196	then
	197	return_addres=172.20.25.41
	198	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	199	fi
	200	# if [[ $return_addres = 210.117.65.1 ]]
	201	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
	202	# then
	203	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
	204	# fi
	205	return_password=""
	206	return_username=$LOGNAME
	207	remotecall=false
	208	remote_username=""
	209	run_mode=""
	210	scirocco=false
	211	store_on_archive_system=true
	212	striche=" ----------------------------------------------------------------------------"
	213	silent=false
	214	source_list=""
	215	source_path=SOURCE
	216	tasks_per_node=""
	217	threads_per_task=1
	218	tmpcreate=false
	219	tmp_data_catalog=""
	220	transfer_problems=false
	221	usern=$LOGNAME
	222	working_directory=`pwd`
	223	TOPT=""
	224	XOPT=""
	225	zeit=$( date \| cut -c 12-19 )
	226
	227	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
	228	typeset -i cputime i ii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
	229
[66]	230	typeset -R30 calltime
[1]	231	typeset -L20 spalte1
	232	typeset -L40 spalte2
	233	typeset -L60 spalte3
	234	typeset -L35 string1=`date`
	235	typeset -L12 string2=$usern
	236	typeset -L12 string3=$localhost_realname
	237	typeset -L12 string4
	238	typeset -L12 string5
[67]	239	typeset -L30 version="MRUN 2.0 Rev$Rev: 97 $"
[1]	240
	241
	242
	243	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	244	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	245
	246	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	247	# EXPORTIERT WERDEN
	248	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
	249	export input_list memory numprocs output_list queue run_mode
	250
	251
	252
	253	# FEHLERBEHANDLUNG
	254	# BEI EXIT:
[83]	255	trap 'rm -rf $working_directory/tmp_mrun
[69]	256	if [[ $locat != localhost ]]
[1]	257	then
[22]	258	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	259	# then
	260	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	261	#MRUN-calls on $localhost
	262	#
	263	#date and time user localhost remotehost termination mrun-command
	264	#--------------------------------------------------------------------------------------------------------------------
	265	#%STATEND%
	266	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	267	# fi
	268	#
	269	# # EINTRAG IN DIE STATISTIK-DATEI
	270	# string4=$host
	271	# string5=$locat
	272	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	273	# then
	274	# if [[ $do_batch = true ]]
	275	# then
	276	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	277	# else
	278	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	279	# fi
	280	# fi
[69]	281	echo " " > /dev/null
[1]	282	fi
	283
	284	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	285	then
	286
	287	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	288	(( i = 0 ))
	289	while (( i < iec ))
	290	do
	291	(( i = i + 1 ))
	292	printf "\n *** Execution of ERROR-command:\n"
	293	printf " >>> ${err_command[$i]}\n"
	294	eval ${err_command[$i]}
	295	done
	296	if [[ -n $interpreted_config_file ]] then
	297	rm -rf $interpreted_config_file
	298	fi
[71]	299	if [[ -n .mrun_environment ]] then
	300	rm -rf .mrun_environment
	301	fi
[1]	302	if [[ $tmpcreate = true ]]
	303	then
	304	printf "\n *** Contents of \"$TEMPDIR\":\n"
	305	ls -al; cd
	306	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	307	fi
	308	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	309	then
	310	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	311	fi
	312	printf "\n\n+++ MRUN killed \n\n"
	313	elif [[ $locat != control_c ]]
	314	then
	315	printf "\n\n --> all actions finished\n\n"
	316	printf " Bye, bye $usern !!\n\n"
	317	fi' exit
	318
	319
	320	# BEI TERMINAL-BREAK:
[83]	321	trap 'rm -rf $working_directory/tmp_mrun
[69]	322	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	323	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	324	then
	325	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	326	fi
	327	printf "\n+++ MRUN killed by \"^C\" \n\n"
	328	locat=control_c
	329	exit
	330	' 2
	331
	332
[22]	333	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	334	# BEEN SET
	335	if [[ "$PALM_BIN" = "" ]]
	336	then
	337	printf "\n +++ environment variable PALM_BIN has not been set"
	338	printf "\n please set it to the directory where the PALM scripts are located"
	339	locat=palm_bin; exit
	340	fi
	341
	342
[1]	343
	344	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	345	# FUER FOLGEJOBS BENOETIGT WIRD
[82]	346	while getopts :a:AbBc:Cd:D:FG:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX: option
[1]	347	do
	348	case $option in
	349	(a) afname=$OPTARG;;
	350	(A) store_on_archive_system=false; mc="$mc -A";;
	351	(b) do_batch=true; mc="$mc -b";;
	352	(B) delete_temporary_catalog=false; mc="$mc -B";;
	353	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	354	(C) restart_run=true; mc="$mc -C";;
[1]	355	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
	356	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
[79]	357	(F) job_on_file="-D"; mc="$mc -F";;
[78]	358	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	359	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	360	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	361	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	362	(I) ignore_archive_error=true; mc="$mc -I";;
	363	(k) keep_data_from_previous_run=true; mc="$mc -k";;
	364	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
	365	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	366	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	367	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	368	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	369	(O) use_openmp=true; mc="$mc -O";;
	370	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	371	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	372	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	373	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	374	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	375	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	376	(S) read_from_config=false; mc="$mc -S";;
	377	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	378	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	379	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	380	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	381	(v) silent=true; mc="$mc -v";;
	382	(x) do_trace=true;set -x; mc="$mc -x";;
	383	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
	384	(\?) printf "\n +++ unknown option $OPTARG \n"
	385	printf "\n --> type \"$0 ?\" for available options \n"
	386	locat=parameter;exit;;
	387	esac
	388	done
	389
	390
	391	# EVTL. POSITIONSPARAMETER EINLESEN
	392	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	393	shift OPTIND-1
	394
	395
	396	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	397	if [[ "$1" = "?" ]]
	398	then
	399	(printf "\n *** mrun can be called as follows:\n"
	400	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
	401	printf "\n Description of available options:\n"
	402	printf "\n Option Description Default-Value"
	403	printf "\n -a base name of input files equiv. -d"
	404	printf "\n -A no archiving when using file-attribute fl"
	405	printf "\n -b batch-job on local machine ---"
	406	printf "\n -B do not delete temporary directory at end ---"
	407	printf "\n -c configuration file .mrun.config"
	408	printf "\n -d base name of files attached to program test"
	409	printf "\n -D preprocessor(cpp)-directives \"\" "
	410	printf "\n -F create remote job file only ---"
	411	printf "\n -h execution host $localhost_realname"
	412	printf "\n -i INPUT control list \"\" "
	413	printf "\n -I archiving errors of previous batch-jobs"
	414	printf "\n will be ignored"
	415	printf "\n -k keep data from previous run"
	416	printf "\n -K additional conditions for controling"
	417	printf "\n usage of conditional code and"
	418	printf "\n env-variables in configuration file \"\" "
	419	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	420	printf "\n -M Makefile name Makefile"
	421	printf "\n -n node usage (shared/not_shared) depending on -h"
	422	printf "\n -o OUTPUT control list \"\" "
	423	printf "\n -O use OpenMP ---"
	424	printf "\n -p software package list \"\" "
	425	printf "\n -q queue \"$queue\" "
	426	printf "\n -r run control list (combines -i -o) \"\" "
	427	printf "\n -s filenames of routines to be compiled \"\" "
	428	printf "\n must end with .f, .f90, .F, or .c !"
	429	printf "\n use \"..\" for more than one file and wildcards"
	430	printf "\n -s TEST compiles all files with w-permit"
	431	printf "\n -S config file interpreted by shellscript ---"
	432	printf "\n -t allowed cpu-time in seconds (batch) 0"
	433	printf "\n -T tasks per node depending on -h"
	434	printf "\n -u username on remote machine \"\" "
	435	printf "\n -v no prompt for confirmation ---"
	436	printf "\n -x tracing of mrun for debug purposes ---"
	437	printf "\n -X # of processors (on parallel machines) 1"
	438	printf "\n "
	439	printf "\n Possible values of positional parameter <modus>:"
	440	printf "\n \"?\" - this outline \n\n") \| more
	441	exit
	442	elif [[ "$1" != "" ]]
	443	then
	444	printf "\n +++ positional parameter $1 unknown \n"
	445	locat=parameter; exit
	446	fi
	447
	448
	449
	450	# KURZE STARTMELDUNG
	451	printf "\n*** $version "
	452	printf "\n will be executed. Please wait ..."
	453
	454
[82]	455
	456	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	457	if [[ ! -f $config_file ]]
	458	then
	459	printf "\n\n +++ configuration file: "
	460	printf "\n $config_file"
	461	printf "\n does not exist"
	462	locat=connect; exit
	463	fi
	464
	465
	466	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	467	line=""
	468	grep "%host_identifier" $config_file > tmp_mrun
	469	while read line
	470	do
	471	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
	472	then
	473	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	474	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	475	if [[ $localhost_realname = $HOSTNAME ]]
[82]	476	then
	477	localhost=$host_identifier
	478	break
	479	fi
	480	fi
	481	done < tmp_mrun
	482
	483	if [[ "$localhost" = "" ]]
	484	then
	485	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	486	printf "\n for local host \"$localhost_realname\"."
	487	printf "\n Please add line"
	488	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	489	printf "\n to the configuration file."
	490	locat=localhost; exit
	491	fi
	492
	493
	494
	495	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	496	case $localhost_realname in
	497	(breg-en0\|berni-en0) archive_system=tivoli;;
	498	(cs*) archive_system=ut;;
	499	(fimm.bccs.uib.no) fimm=true;;
	500	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	501	(hreg-en0\|hanni-en0) archive_system=tivoli;;
	502	(scirocco) scirocco=true;;
	503	esac
	504
	505
	506
[1]	507	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	508	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	509	[[ "$afname" = "" ]] && afname=$fname
	510
	511
	512	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	513	if [[ "$run_mode" != "" ]]
	514	then
	515	input_list="$input_list $run_mode"
	516	output_list="$output_list $run_mode"
	517	fi
	518
	519
	520	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	521	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	522	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	523	# STARTET)
	524	if [[ "$fromhost" = "" ]]
	525	then
	526	fromhost=$localhost
	527	fi
	528
	529
	530	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	531	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	532	then
	533	source_list=TEST
	534	local_compile=true
	535	host=$localhost
	536	fi
	537
	538
	539	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	540	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	541	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	542	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	543	if [[ -n $host && "$host" != $localhost ]]
	544	then
	545	do_batch=true
	546	do_remote=true
	547	case $host in
[5]	548	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
[1]	549	(*) printf "\n"
[83]	550	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	551	printf "\n is not available"
[1]	552	locat=nqs; (( iec = 0 )); exit;;
	553	esac
	554	else
	555	host=$localhost
	556	fi
	557
	558
	559	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	560	if [[ -n $additional_conditions ]]
	561	then
[69]	562	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	563	cond1=`echo $additional_conditions \| cut -d" " -f1`
	564	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	565	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	566	if [[ -n $dummy ]]
	567	then
	568	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	569	locat=options; exit
	570	fi
	571	fi
	572
	573
	574	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	575	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	576	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	577	then
	578	if [[ $ignore_archive_error = false ]]
	579	then
	580	printf "\n +++ data archiving of previous run failed"
	581	printf "\n see directory \~/job_queue on remote machine"
	582	locat=archive; exit
	583	else
	584	printf "\n +++ warning: data archiving in a previous run failed"
	585	printf "\n MRUN continues, trying to get backup copy"
	586	fi
	587	fi
	588
	589
	590
	591	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	592	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	593	if [[ "$read_from_config" = false ]]
	594	then
	595
	596	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	597	while read zeile
	598	do
	599	[[ $silent = false ]] && printf "."
	600
	601
	602	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	603	# ERSETZEN
	604	eval zeile=\"$zeile\"
	605
	606
	607	# INTERPRETATION DER ZEILE
[21]	608	if [[ "$(echo $zeile)" = "" ]]
[1]	609	then
[21]	610	# LEERZEILE, KEINE AKTION
	611	continue
[1]	612
[21]	613	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	614	then
	615
[1]	616	# ZEILE IST KOMMENTARZEILE
	617	true
	618
	619	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	620	then
	621
	622	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	623	zeile=$(echo $zeile \| cut -c2-)
[69]	624	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	625	var=`echo $zeile \| cut -d" " -f1`
	626	value=`echo $zeile \| cut -d" " -s -f2`
	627	for_host=`echo $zeile \| cut -d" " -s -f3`
	628	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	629	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	630
	631	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	632	then
	633
	634	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	635	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	636	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	637
	638
	639	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	640	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	641	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	642	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	643	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	644	# KONFIGURATIONSDATEI
	645	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	646	then
	647	eval $var=\$value
	648
	649	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	650	if [[ $do_trace = true ]]
	651	then
	652	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	653	fi
	654	fi
	655
	656	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	657	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	658	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	659	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	660	if [[ $var = host ]]
	661	then
	662	if [[ -n $host && "$host" != $localhost ]]
	663	then
	664	do_batch=true
	665	do_remote=true
	666	case $host in
	667	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
[83]	668	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	669	printf "\n is not available"
[1]	670	locat=nqs; exit;;
	671	esac
	672	else
	673	host=$localhost
	674	fi
	675	fi
	676
	677	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	678	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	679	# DEN PROGRAMMEN BENOETIGT WERDEN
	680	export $var
	681	fi
	682
	683
	684
	685
	686	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	687	then
	688
	689	# ZEILE DEFINIERT ERROR-KOMMANDO
	690	(( iec = iec + 1 ))
	691	zeile=$(echo $zeile \| cut -c4-)
	692	err_command[$iec]="$zeile"
	693
	694	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	695	then
	696
	697	# ZEILE DEFINIERT INPUT-KOMMANDO
	698	(( iic = iic + 1 ))
	699	zeile=$(echo $zeile \| cut -c4-)
	700	in_command[$iic]="$zeile"
	701
	702	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	703	then
	704
	705	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	706	(( ioc = ioc + 1 ))
	707	zeile=$(echo $zeile \| cut -c4-)
	708	out_command[$ioc]="$zeile"
	709
	710	else
	711
	712	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	713	# s2a: in/out - Feld
	714	# s2b: loc - Feld (optional)
	715	# s2c: tr/ar - Feld (optional)
[69]	716	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	717	s1=`echo $zeile \| cut -d" " -f1`
	718	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	719	s2a=$(echo $s2 \| cut -d":" -f1)
	720	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	721	then
	722	s2b=""
	723	s2c=""
	724	else
[69]	725	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	726	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	727	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	728	fi
[69]	729	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	730	s3=`echo $zeile \| cut -d" " -f3`
	731	s4=`echo $zeile \| cut -d" " -s -f4`
	732	s5=`echo $zeile \| cut -d" " -s -f5`
	733	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	734
	735
	736	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	737	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	738	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	739	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	740	# HANDEN SEIN MUSS (D.H. s2b = loc)
	741	IFSALT="$IFS"; IFS="$IFS:"
	742	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	743	then
	744	found=false
	745	for actual in $input_list
	746	do
	747	for formal in $s3
	748	do
	749	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	750	done
	751	done
	752	if [[ $found = true ]]
	753	then
	754	(( iin = iin + 1 ))
	755	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	756	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	757	extin[$iin]=$s6
	758	fi
	759	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	760	then
	761	found=false
	762	for actual in $output_list
	763	do
	764	for formal in $s3
	765	do
	766	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	767	done
	768	done
	769	if [[ $found = true ]]
	770	then
	771	(( iout = iout + 1 ))
	772	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	773	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	774	fi
	775	elif [[ "$s2a" != in && "$s2a" != out ]]
	776	then
	777	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	778	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	779	locat=connect; exit
	780	fi
	781	IFS="$IFSALT"
	782	fi
	783	done < $config_file
	784
	785	else
	786
	787
	788	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	789	[[ $silent = false ]] && printf "..."
	790	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	791	export interpreted_config_file=.icf.$RANDOM
	792
	793
[69]	794
	795	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	796	# VERFUEGUNG STELLEN
	797	cat > .mrun_environment << %%END%%
	798	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	799	config_file = '$config_file', do_remote = '$do_remote',
	800	do_trace = '$do_trace', host = '$host',
	801	input_list = '$input_list', icf = '$interpreted_config_file',
	802	localhost = '$localhost', output_list = '$output_list' /
	803
	804	%%END%%
	805
	806	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	807	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	808	mrun_memory=$memory
	809	mrun_cpumax=$cpumax
	810	mrun_numprocs=$numprocs
	811
[66]	812	if [[ $localhost_realname = "gate" ]]
	813	then
	814	interpret_config_gate.x
	815	else
	816	interpret_config.x
	817	fi
[71]	818	rm .mrun_environment
[1]	819
[71]	820
[1]	821	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	822	chmod u+x $interpreted_config_file
	823	export PATH=$PATH:.
	824	. $interpreted_config_file
[71]	825	rm $interpreted_config_file
[1]	826
[71]	827
[69]	828	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	829	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
	830	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	831	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	832
[1]	833	fi
	834
	835
	836	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	837	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	838	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	839	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	840	if [[ "$SOURCES_COMPLETE" = "" ]]
	841	then
	842
	843	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	844	# VEREINBART WURDE
	845	source_path=""
	846	line=""
	847	grep "%source_path" $config_file > tmp_mrun
	848	while read line
	849	do
	850	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	851	then
	852	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	853	then
	854	global_source_path=`echo $line \| cut -d" " -f2`
	855	fi
	856	fi
	857	done < tmp_mrun
	858
	859	line=""
	860	found=false
	861	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	862	while read line
	863	do
	864	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	865	then
	866	if [[ $found = true ]]
	867	then
	868	printf "\n\n +++ more than one source path found in configuration file"
	869	printf "\n for local host \"$localhost\" "
	870	locat=source_path; exit
	871	fi
	872	source_path=`echo $line \| cut -d" " -f2`
	873	found=true
	874	fi
	875	done < tmp_mrun
	876	rm tmp_mrun
	877
	878	if [[ "$source_path" = "" ]]
	879	then
	880	if [[ "$global_source_path" != "" ]]
	881	then
	882	source_path=$global_source_path
	883	else
	884	printf "\n\n +++ no source path found in configuration file"
	885	printf "\n for local host \"$localhost\" "
	886	locat=source_path; exit
	887	fi
	888	fi
	889	eval source_path=$source_path
	890
	891	if [[ ! -d $source_path ]]
	892	then
	893	printf "\n\n +++ source path \"$source_path\" on local host"
	894	printf "\n \"$localhost\" does not exist"
	895	locat=source_path; exit
	896	fi
	897
	898	fi
	899
	900
[78]	901	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	902	# DURCH OPTION -G MITGETEILT)
	903	if [[ "$global_revision" = "" ]]
	904	then
	905	global_revision=`svnversion $source_path 2>/dev/null`
	906	global_revision="Rev: $global_revision"
	907	fi
[1]	908
[78]	909
[1]	910	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	911	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	912	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	913	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	914	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	915	if [[ -n $host && "$host" != $localhost ]]
	916	then
	917	do_batch=true
	918	do_remote=true
	919	case $host in
[5]	920	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
[1]	921	(*) printf "\n"
[83]	922	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	923	printf "\n is not available"
[1]	924	locat=nqs; (( iec = 0 )); exit;;
	925	esac
	926	else
	927	host=$localhost
	928	fi
	929
	930
	931	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	932	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	933	then
	934
	935	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	936	if [[ ! -n $numprocs ]]
	937	then
	938	printf "\n"
	939	printf "\n +++ option \"-K parallel\" requires additional specification"
	940	printf "\n of the number of processors to be used by"
	941	printf "\n mrun-option \"-X\" or by environment-variable"
	942	printf "\n \"numprocs\" in the configuration file"
	943	locat=numprocs; (( iec = 0 )); exit
	944	fi
	945
	946	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	947	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	948	# GESAMTPROZESSORANZAHL IST
	949	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
	950	then
	951	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	952	(( ival = $tasks_per_node ))
	953	(( pes = numprocs ))
	954	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	955	# then
	956	# (( pes = pes - 1 ))
	957	# fi
	958	(( ii = pes / ival ))
	959	if (( pes - ii * ival > 0 ))
	960	then
	961	printf "\n"
	962	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	963	printf "\n divisor of the total number of processors (option \"-X\")"
	964	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	965	locat=tasks_per_node; (( iec = 0 )); exit
	966	fi
	967	fi
	968
	969	# IBMY HAT NUR EINEN KNOTEN
	970	if [[ $host = ibmy ]]
	971	then
	972	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	973	then
	974	printf "\n"
	975	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	976	printf "\n total number of processors (option \"-X\")"
	977	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	978	locat=tasks_per_node; (( iec = 0 )); exit
	979	fi
	980	fi
	981
	982	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	983	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	984	if [[ $use_openmp = true ]]
	985	then
	986	threads_per_task=$tasks_per_node
	987	tasks_per_node=1
	988	fi
	989	OOPT="-O $threads_per_task"
	990	TOPT="-T $tasks_per_node"
	991
	992	# GESAMTZAHL DER KNOTEN BESTIMMEN
	993	if [[ "$tasks_per_node" != "" ]]
	994	then
	995	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	996	fi
	997
	998	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	999	# SETZEN
	1000	if [[ $node_usage = default ]]
	1001	then
	1002	if [[ $host = ibms ]]
	1003	then
	1004	node_usage=shared
	1005	else
	1006	node_usage=not_shared
	1007	fi
	1008	fi
	1009	if [[ $node_usage != shared && $node_usage != not_shared ]]
	1010	then
	1011	printf "\n"
	1012	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1013	printf "\n \"shared\" or \"not_shared\""
	1014	locat=tasks_per_node; (( iec = 0 )); exit
	1015	fi
	1016
	1017	fi
	1018
	1019	# PRUEFEN, OB HOSTFILE EXISTIERT
	1020	if [[ -n $hostfile ]]
	1021	then
	1022	if [[ ! -f $hostfile ]]
	1023	then
	1024	printf "\n"
	1025	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1026	locat=hostfile; exit
	1027	fi
	1028	fi
	1029
	1030	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1031	if [[ $host = ibmy && $do_remote = false ]]
	1032	then
	1033	if [[ ! -f $HOME/.rhosts ]]
	1034	then
	1035	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1036	printf "\n\n *** file:"
	1037	printf "\n $HOME/.rhosts"
	1038	printf "\n was created\n"
	1039	fi
	1040	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1041	then
	1042	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1043	printf "\n\n *** file:"
	1044	printf "\n $HOME/.rhosts"
	1045	printf "\n was extended by the name of the current host\n"
	1046	fi
	1047	fi
	1048
	1049
	1050
	1051	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1052	if [[ $queue = none ]]
	1053	then
	1054	case $host in
	1055	(ibmb) if [[ $node_usage = shared ]]
	1056	then
	1057	queue=cshare
	1058	else
	1059	queue=csolo
	1060	fi;;
	1061	(ibmh) if [[ $node_usage = shared ]]
	1062	then
	1063	queue=cshare
	1064	else
	1065	queue=csolo
	1066	fi;;
	1067	(ibmy) queue=parallel;;
	1068	(lctit) queue=default;;
	1069	(nech) queue=none;;
	1070	(neck) queue=P;;
	1071	(unics) queue=unics;;
	1072	esac
	1073	fi
	1074
	1075
	1076	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1077	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1078	# ERMITTELN
	1079	(( i = 0 ))
	1080	while (( i < iin ))
	1081	do
	1082	(( i = i + 1 ))
	1083	(( maxcycle = 0 ))
	1084
	1085	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1086	if [[ "${actionin[$i]}" = di ]]
	1087	then
	1088	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1089	# REM-MASCHINE AUSWERTEN
	1090	eval filename=${pathin[$i]}/${endin[$i]}
	1091	else
	1092	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1093	# REM-MASCHINE AUSWERTEN
	1094	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1095	fi
	1096
	1097	# PRUEFEN AUF VORHANDENSEIN
	1098	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1099	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1100	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1101	then
	1102	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1103	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1104	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1105	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1106	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1107	if [[ "${transin[$i]}" != "locopt" ]]
	1108	then
	1109	printf "\n\n +++ INPUT-file: "
	1110	if [[ "${extin[$i]}" = "" ]]
	1111	then
	1112	printf "\n $filename"
	1113	else
	1114	printf "\n $filename.${extin[$i]}"
	1115	fi
	1116	printf "\n does not exist\n"
	1117	locat=input; exit
	1118	else
	1119	transin[$i]="unavailable"
	1120	fi
	1121	else
	1122
	1123	# ZYKLUSNUMMER FESTSTELLEN
	1124	ls -1 -d $filename > filelist 2>/dev/null
	1125	ls -1 -d $filename.* >> filelist 2>/dev/null
	1126	while read zeile
	1127	do
	1128	cycle=$(print $zeile \| cut -f2 -d".")
	1129	if [[ "$cycle" = "$zeile" ]]
	1130	then
	1131	(( icycle = 0 ))
	1132	elif [[ "$cycle" = "${extin[$i]}" ]]
	1133	then
	1134	(( icycle = 0 ))
	1135	else
	1136	(( icycle = $cycle ))
	1137	fi
	1138	if (( icycle > maxcycle ))
	1139	then
	1140	(( maxcycle = icycle ))
	1141	file_to_be_used=$zeile
	1142	fi
	1143	done <filelist
	1144	rm filelist
	1145
	1146	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1147	if (( maxcycle > 0 ))
	1148	then
	1149	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1150	then
	1151	filename=${filename}.$maxcycle.${extin[$i]}
	1152	else
	1153	filename=${filename}.$maxcycle
	1154	fi
	1155	else
	1156	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1157	then
	1158	filename=${filename}.${extin[$i]}
	1159	fi
	1160	fi
	1161
	1162	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1163	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1164	absnamein[$i]=$filename
	1165	if (( maxcycle > 0 ))
	1166	then
	1167	if [[ "${actionin[$i]}" = di ]]
	1168	then
	1169	frelin[$i]=${endin[$i]}.$maxcycle
	1170	else
	1171	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1172	fi
	1173	else
	1174	if [[ "${actionin[$i]}" = di ]]
	1175	then
	1176	frelin[$i]=${endin[$i]}
	1177	else
	1178	frelin[$i]=${afname}${endin[$i]}
	1179	fi
	1180	fi
	1181
	1182	fi
	1183	done
	1184
	1185
	1186	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1187	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1188	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1189	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1190	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1191	(( i = 0 ))
	1192	while (( i < iout ))
	1193	do
	1194	(( i = i + 1 ))
	1195	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1196	then
	1197	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
	1198	then
	1199	actionout[$i]=""
	1200	elif [[ "${actionout[$i]}" = tra ]]
	1201	then
	1202	actionout[$i]=a
	1203	fi
	1204	(( maxcycle = 0 ))
	1205	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1206	eval catalogname=${pathout[$i]}
	1207	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1208	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1209	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1210	then
	1211
	1212	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1213	if cat /dev/null > $filename
	1214	then
	1215	rm $filename
	1216	else
	1217
	1218	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1219	if [[ ! -d $catalogname ]]
	1220	then
	1221	if mkdir -p $catalogname
	1222	then
	1223	printf "\n\n *** directory:"
	1224	printf "\n $catalogname"
	1225	printf "\n was created\n"
	1226	else
	1227	printf "\n\n +++ OUTPUT-file:"
	1228	printf "\n $filename"
	1229	printf "\n cannot be created, because directory does not exist"
	1230	printf "\n and cannot be created either"
	1231	printf "\n"
	1232	locat=output ; exit
	1233	fi 2>/dev/null
	1234	else
	1235	printf "\n\n +++ OUTPUT-file:"
	1236	printf "\n $filename"
	1237	printf "\n cannot be created, although directory exists"
	1238	printf "\n"
	1239	locat=output ; exit
	1240	fi
	1241	fi 2>/dev/null
	1242	else
	1243
	1244	# ZYKLUSNUMMER FESTSTELLEN
	1245	ls -1 -d $filename > filelist 2>/dev/null
	1246	ls -1 -d $filename.* >> filelist 2>/dev/null
	1247	while read zeile
	1248	do
	1249	cycle=$(print $zeile \| cut -f2 -d".")
	1250	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1251	then
	1252	(( icycle = 1 ))
	1253	else
	1254	(( icycle = $cycle + 1 ))
	1255	fi
	1256	if (( icycle > maxcycle ))
	1257	then
	1258	(( maxcycle = icycle ))
	1259	fi
	1260	done <filelist
	1261	rm filelist
	1262	fi
	1263
	1264	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1265	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1266	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1267	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1268	if [[ "${actionout[$i]}" != a ]]
	1269	then
	1270	if (( maxcycle > 0 ))
	1271	then
	1272	filename=${filename}.$maxcycle
	1273	if cat /dev/null > $filename
	1274	then
	1275	rm $filename
	1276	else
	1277	printf "\n +++ OUTPUT-file:"
	1278	printf "\n $filename"
	1279	printf "\n cannot be created"
	1280	locat=output ; exit
	1281	fi
	1282	fi
	1283	else
	1284	(( maxcycle = maxcycle - 1 ))
	1285	if (( maxcycle > 0 ))
	1286	then
	1287	filename=${filename}.$maxcycle
	1288	fi
	1289	fi
	1290
	1291	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1292	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1293	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1294	pathout[$i]=$filename
	1295	if (( maxcycle > 0 ))
	1296	then
	1297	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1298	else
	1299	frelout[$i]=${fname}${endout[$i]}
	1300	fi
	1301
	1302	fi
	1303	done
	1304
	1305
[83]	1306	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
	1307	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1308	then
	1309	if [[ "$dvrp_inc" = "" ]]
	1310	then
	1311	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
	1312	printf "\n This is required for the dvrp_graphics package.\n"
	1313	locat=dvrp; exit
	1314	fi
	1315	if [[ "$dvrp_lib" = "" ]]
	1316	then
	1317	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
	1318	printf "\n This is required for the dvrp_graphics package.\n"
	1319	locat=dvrp; exit
	1320	fi
	1321	fi
	1322
	1323
[1]	1324	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1325	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1326	# UEBERSETZT ZU WERDEN)
	1327	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1328	then
	1329	printf "\n +++ neither main program nor executable defined"
	1330	locat=source; exit
	1331	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1332	then
	1333	printf "\n +++ main program as well as executable defined"
	1334	locat=source; exit
	1335	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1336	then
	1337	do_compile=false
	1338	fi
	1339
	1340
	1341	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1342	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1343	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1344	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1345	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1346	then
	1347
[5]	1348	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1349	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1350
[5]	1351	if [[ $restart_run != true ]]
[1]	1352	then
	1353	rm -rf SOURCES_FOR_RUN_$fname
	1354	mkdir SOURCES_FOR_RUN_$fname
	1355	fi
	1356
	1357
	1358	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1359	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1360	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1361	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1362	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1363	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1364	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1365	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1366	# GESAMMELT
[5]	1367	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1368	then
	1369
	1370	source_list=""
	1371	cd $source_path
	1372
	1373
	1374	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1375	Names=$(ls -1 *.f90 2>&1)
	1376	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1377	Names=$(ls -1 *.F90 2>&1)
	1378	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1379	Names=$(ls -1 *.F 2>&1)
	1380	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1381	Names=$(ls -1 *.f 2>&1)
	1382	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1383	Names=$(ls -1 *.c 2>&1)
	1384	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1385
	1386
	1387	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1388	for dateiname in $Filenames
	1389	do
	1390	if [[ -w $dateiname ]]
	1391	then
	1392	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1393	then
	1394	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1395	source_list=$source_list"$dateiname "
	1396	fi
	1397	fi
	1398	done
	1399
	1400	cd - > /dev/null
	1401
	1402
[5]	1403	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1404	then
	1405
	1406	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1407	source_list=""
	1408	cd $source_path
	1409
	1410
	1411	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1412	if [[ ! -d .svn ]]
	1413	then
	1414	printf "\n\n +++ source directory"
	1415	printf "\n \"$source_path\" "
	1416	printf "\n is not under control of \"subversion\"."
	1417	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1418	fi
	1419
	1420
	1421	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1422	Filenames=""
[69]	1423	svn status > tmp_mrun
	1424	while read line
[5]	1425	do
	1426	firstc=`echo $line \| cut -c1`
	1427	if [[ $firstc = M \|\| $firstc = "?" ]]
	1428	then
	1429	Name=`echo "$line" \| cut -c8-`
	1430	extension=`echo $Name \| cut -d. -f2`
	1431	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1432	then
	1433	Filenames="$Filenames "$Name
	1434	fi
	1435	fi
[69]	1436	done < tmp_mrun
[5]	1437
	1438
	1439	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1440	for dateiname in $Filenames
	1441	do
	1442	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1443	source_list=$source_list"$dateiname "
	1444	done
	1445
	1446	cd - > /dev/null
	1447
	1448
[1]	1449	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1450	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1451	# VORHANDEN
[5]	1452	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1453	then
	1454
	1455	cd $source_path
	1456
	1457	for filename in $source_list
	1458	do
	1459
	1460	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1461	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1462	then
	1463	printf "\n +++ source code file: $filename"
	1464	printf "\n must not contain (\"/\") "
	1465	locat=source; exit
	1466	fi
	1467
	1468	if [[ ! -f $filename ]]
	1469	then
	1470	printf "\n +++ source code file: $filename"
	1471	printf "\n does not exist"
	1472	locat=source; exit
	1473	else
	1474	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1475	fi
	1476
	1477	done
	1478
	1479	cd - > /dev/null
	1480
	1481	fi
	1482
	1483
	1484	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1485	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1486	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1487	if [[ $restart_run != true ]]
[1]	1488	then
	1489
	1490	if [[ ! -f "$source_path/$mainprog" ]]
	1491	then
	1492	printf "\n\n +++ main program: $mainprog"
	1493	printf "\n does not exist in source directory"
	1494	printf "\n \"$source_path\"\n"
	1495	locat=source; exit
	1496	else
	1497	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1498	then
	1499	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1500	source_list=${mainprog}" $source_list"
	1501	fi
	1502	fi
	1503	fi
	1504
	1505
	1506	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1507	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1508	then
	1509
	1510	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1511	if [[ ! -d $add_source_path ]]
	1512	then
	1513	printf "\n\n +++ WARNING: additional source code directory"
	1514	printf "\n \"$add_source_path\" "
	1515	printf "\n does not exist or is not a directory."
	1516	printf "\n No source code will be used from this directory!\n"
	1517	add_source_path=""
	1518	sleep 3
	1519	else
	1520
	1521	cd $add_source_path
	1522
	1523	Names=$(ls -1 *.f90 2>&1)
	1524	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1525	Names=$(ls -1 *.F90 2>&1)
	1526	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1527	Names=$(ls -1 *.F 2>&1)
	1528	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1529	Names=$(ls -1 *.f 2>&1)
	1530	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1531	Names=$(ls -1 *.c 2>&1)
	1532	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1533
	1534	cd - > /dev/null
	1535	cd SOURCES_FOR_RUN_$fname
	1536
	1537	for dateiname in $AddFilenames
	1538	do
	1539	if [[ -f $dateiname ]]
	1540	then
	1541	printf "\n +++ source code file \"$dateiname\" found in additional"
	1542	printf "\n source code directory \"$add_source_path\" "
	1543	printf "\n as well as in directory \"$source_path\"."
	1544	locat=source; exit
	1545	fi
	1546
	1547	cp $add_source_path/$dateiname .
	1548	source_list="$source_list $dateiname"
	1549
	1550	# Default User-Interface von der Liste entfernen, falls Datei
	1551	# ein User-Interface enthaelt
	1552	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1553	then
[50]	1554	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
[1]	1555	then
	1556	rm -rf user_interface.f90
	1557	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
[50]	1558	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
[1]	1559	printf "\n since a user-interface is found in file"
	1560	printf "\n \"$add_source_path/$dateiname\" \n"
	1561	sleep 3
	1562	else
	1563	printf "\n\n *** user-interface file \"$dateiname\" "
	1564	printf "\n added to the files to be translated \n"
	1565	sleep 3
	1566	fi
	1567	fi
	1568	done
	1569
	1570	cd - > /dev/null
	1571	fi
	1572	fi
	1573
	1574
	1575	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1576	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1577	if [[ $restart_run != true && -n $package_list ]]
[1]	1578	then
	1579
	1580	cd $source_path
	1581
	1582	for package in $package_list
	1583	do
	1584
	1585	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1586
	1587	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1588	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1589	# LIEFERT
	1590	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1591
	1592
	1593	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1594	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1595	for source_list_name in $package_source_list
	1596	do
	1597	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1598	then
	1599
	1600	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1601	ending=`echo $source_list_name \| cut -f2 -d.`
	1602	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1603	then
	1604	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1605	source_list="$source_list $source_list_name"
	1606	fi
	1607	fi
	1608	done
	1609	done
	1610
	1611	cd - > /dev/null
	1612	fi
	1613
	1614
	1615	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1616	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[82]	1617	if [[ "$restart_run" != true ]]
[1]	1618	then
	1619	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1620	if [[ ! -f $makefile ]]
	1621	then
	1622	printf "\n +++ file \"$makefile\" does not exist"
	1623	locat=make; exit
	1624	else
	1625	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1626	fi
	1627	fi
	1628
	1629	fi # do_compile=true
	1630
	1631
	1632	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1633	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1634	if [[ $do_compile = true ]]
	1635	then
	1636
	1637	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1638	# ZUSAMMENSETZEN
[83]	1639	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1640	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1641	then
[82]	1642	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1643	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1644	then
[82]	1645	cpp_options="$cpp_options -D__nec"
	1646	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1647	then
	1648	cpp_options="$cpp_options -D__lc"
[1]	1649	else
[82]	1650	cpp_options="$cpp_options -D__$localhost"
[1]	1651	fi
[83]	1652
	1653	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1654	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1655	then
[82]	1656	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1657	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1658	else
[82]	1659	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1660	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1661	fi
[83]	1662
	1663	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1664	if [[ -n $package_list ]]
	1665	then
	1666	for package in $package_list
	1667	do
	1668	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1669	then
	1670	if [[ $package != "dvrp_graphics+1PE" ]]
	1671	then
[82]	1672	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1673	else
[82]	1674	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1675	export use_seperate_pe_for_dvrp_output=true
	1676	fi
	1677	else
	1678	if [[ $package != "dvrp_graphics+1PE" ]]
	1679	then
[82]	1680	cpp_options="$cpp_options -D__$package"
[1]	1681	else
[82]	1682	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1683	export use_seperate_pe_for_dvrp_output=true
	1684	fi
	1685	fi
	1686	done
	1687	fi
[83]	1688
	1689	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1690	if [[ -n $cpp_opts ]]
	1691	then
	1692	for popts in $cpp_opts
	1693	do
[82]	1694	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1695	then
	1696	cpp_options="${cpp_options},-D__$popts=__$popts"
	1697	else
	1698	cpp_options="$cpp_options -D__$popts"
	1699	fi
[1]	1700	done
	1701	fi
	1702
	1703	else
	1704
	1705
	1706	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1707	if [[ $do_remote = false ]]
	1708	then
	1709	if [[ ! -f $executable ]]
	1710	then
	1711	printf "\n +++ executable file: $executable"
	1712	printf "\n does not exist"
	1713	locat=executable; exit
	1714	fi
	1715	fi
	1716	fi
	1717
	1718
	1719	# JOBMODUS FESTSTELLEN
	1720	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1721	then
	1722	jobmo=BATCH
	1723	else
	1724	jobmo=INTERACTIVE
	1725	fi
	1726
	1727
	1728	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1729	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1730	if [[ "$compiler_name" = "" ]]
	1731	then
[82]	1732
	1733	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
	1734	locat=compiler_name; exit
	1735
[1]	1736	fi
	1737
	1738
	1739	# COMPILER AUF NECK UEBERSCHREIBEN
	1740	[[ $localhost = neck ]] && compiler_name=mpif90
	1741
	1742
	1743
	1744	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1745	kennung=$RANDOM
	1746	if [[ "$tmp_user_catalog" = "" ]]
	1747	then
	1748	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1749	then
	1750	tmp_user_catalog=$TMPDIR
	1751	elif [[ $localhost = nech ]]
	1752	then
	1753	tmp_user_catalog=$WRKSHR
	1754	else
	1755	tmp_user_catalog=/tmp
	1756	fi
	1757	fi
	1758	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1759
	1760
	1761	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1762	# BESTIMMEN
	1763	if [[ "$tmp_data_catalog" = "" ]]
	1764	then
	1765	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1766	then
	1767	tmp_data_catalog=$WORK/mrun_restart_data
	1768	elif [[ $localhost = nech ]]
	1769	then
	1770	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1771	else
	1772	tmp_data_catalog=/tmp/mrun_restart_data
	1773	fi
	1774	fi
	1775
	1776
	1777	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1778	# ERSETZEN
	1779	if [[ $do_remote = false && $do_compile = true ]]
	1780	then
	1781	eval fopts=\"$fopts\"
	1782	eval lopts=\"$lopts\"
	1783	fi
	1784
	1785
	1786
	1787	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[82]	1788	fopts="$fopts $netcdf_inc $dvrp_inc"
	1789	lopts="$lopts $netcdf_lib $dvrp_lib"
[1]	1790	ROPTS="$ropts"
	1791	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit ) && -n $numprocs ]]
	1792	then
	1793	XOPT="-X $numprocs"
	1794	fi
	1795
	1796
	1797
	1798	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1799	# GRAMM BENOETIGT
	1800	done=false
	1801	while [[ $done = false ]]
	1802	do
	1803	cputime=$cpumax
	1804	if (( $cputime == 0 ))
	1805	then
	1806	printf "\n +++ cpu-time is undefined"
	1807	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1808	printf "\n >>> "
	1809	read cputime 1>/dev/null 2>&1
	1810	else
	1811	done=true
	1812	fi
	1813	cpumax=$cputime
	1814	done
	1815
	1816	(( minuten = cputime / 60 ))
	1817	(( sekunden = cputime - minuten * 60 ))
	1818
	1819
	1820	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	1821	if [[ $do_batch = true ]]
	1822	then
	1823	done=false
	1824	while [[ $done = false ]]
	1825	do
	1826	if (( memory == 0 ))
	1827	then
	1828	printf "\n +++ memory demand is undefined"
	1829	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	1830	printf "\n >>> "
	1831	read memory 1>/dev/null 2>&1
	1832	else
	1833	done=true
	1834	fi
	1835	done
	1836	fi
	1837
	1838
	1839	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	1840	if [[ $do_remote = true && -z $remote_username ]]
	1841	then
	1842	while [[ -z $remote_username ]]
	1843	do
	1844	printf "\n +++ username on remote host \"$host\" is undefined"
	1845	printf "\n >>> Please type username:"
	1846	printf "\n >>> "
	1847	read remote_username
	1848	done
	1849	mc="$mc -u$remote_username"
	1850	fi
	1851
	1852	###########################################################################
	1853	# HEADER-AUSGABE
	1854	###########################################################################
	1855
	1856
	1857	calltime=$(date)
	1858	printf "\n"
	1859	# [[ $silent = false ]] && clear
	1860	printf "#--------------------------------------------------------------# \n"
	1861	printf "\| $version$calltime \| \n"
	1862	printf "\| \| \n"
	1863	spalte1="called on:"; spalte2=$localhost_realname
	1864	printf "\| $spalte1$spalte2 \| \n"
	1865	if [[ $local_compile = false ]]
	1866	then
	1867	if [[ $do_remote = true ]]
	1868	then
	1869	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	1870	else
	1871	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	1872	fi
	1873	else
	1874	spalte1="compiling test only!"; spalte2=""
	1875	fi
	1876	printf "\| $spalte1$spalte2 \| \n"
	1877	if [[ -n $numprocs ]]
	1878	then
	1879	spalte1="number of PEs:"; spalte2=$numprocs
	1880	printf "\| $spalte1$spalte2 \| \n"
	1881	fi
	1882	if [[ -n $tasks_per_node ]]
	1883	then
	1884	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	1885	printf "\| $spalte1$spalte2 \| \n"
	1886	fi
	1887	if [[ $threads_per_task != 1 ]]
	1888	then
	1889	spalte1="threads per task:"; spalte2="$threads_per_task"
	1890	printf "\| $spalte1$spalte2 \| \n"
	1891	fi
	1892	printf "\| \| \n"
	1893	if [[ $do_compile = true ]]
	1894	then
[82]	1895	spalte1=cpp-directives:; spalte2=$cpp_options
[1]	1896	printf "\| $spalte1$spalte2 \| \n"
[82]	1897	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	1898	while [[ "$zeile" != "" ]]
	1899	do
	1900	spalte1=""
	1901	spalte2=$zeile
	1902	printf "\| $spalte1$spalte2 \| \n"
	1903	zeile=$(echo "$zeile" \| cut -c41-)
	1904	done
	1905
[82]	1906	spalte1=compiler-options:; spalte2="$fopts"
[1]	1907	printf "\| $spalte1$spalte2 \| \n"
[82]	1908	zeile=$(echo "$fopts" \| cut -c41-)
[1]	1909	while [[ "$zeile" != "" ]]
	1910	do
	1911	spalte1=""
	1912	spalte2=$zeile
	1913	printf "\| $spalte1$spalte2 \| \n"
	1914	zeile=$(echo "$zeile" \| cut -c41-)
	1915	done
	1916
[82]	1917	spalte1=linker-options:; spalte2=$lopts
[1]	1918	printf "\| $spalte1$spalte2 \| \n"
[82]	1919	zeile=$(echo "$lopts" \| cut -c41-)
[1]	1920	while [[ "$zeile" != "" ]]
	1921	do
	1922	spalte1=""
	1923	spalte2=$zeile
	1924	printf "\| $spalte1$spalte2 \| \n"
	1925	zeile=$(echo "$zeile" \| cut -c41-)
	1926	done
	1927
	1928	spalte1="main program":; spalte2=$mainprog
	1929	printf "\| $spalte1$spalte2 \| \n"
	1930	else
	1931	spalte1=executable:; spalte2=$executable
	1932	printf "\| $spalte1$spalte2 \| \n"
	1933	fi
	1934	printf "\| \| \n"
	1935	spalte1="base name of files":; spalte2=$fname
	1936	printf "\| $spalte1$spalte2 \| \n"
	1937	if [[ $fname != $afname ]]
	1938	then
	1939	spalte1="base name of input files":; spalte2=$afname
	1940	printf "\| $spalte1$spalte2 \| \n"
	1941	fi
	1942	spalte1="INPUT control list":; spalte2=$input_list
	1943	printf "\| $spalte1$spalte2 \| \n"
	1944	spalte1="OUTPUT control list":; spalte2=$output_list
	1945	printf "\| $spalte1$spalte2 \| \n"
	1946
	1947	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	1948	then
	1949	spalte1="memory demand / PE":; spalte2="$memory MB"
	1950	printf "\| $spalte1$spalte2 \| \n"
	1951	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	1952	printf "\| $spalte1$spalte2 \| \n"
	1953	fi
	1954
	1955	if [[ $do_compile = true ]]
	1956	then
	1957	printf "\| \| \n"
	1958	printf "\| Files to be compiled: \| \n"
	1959	zeile=$source_list
	1960	while [[ "$zeile" != "" ]]
	1961	do
	1962	spalte3=$zeile
	1963	printf "\| $spalte3 \| \n"
	1964	zeile=$(echo "$zeile" \| cut -c61-)
	1965	done
	1966	fi
	1967	printf "#--------------------------------------------------------------#"
	1968
	1969
	1970
	1971	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	1972	if [[ $do_trace = true ]]
	1973	then
	1974	(( i = 0 ))
	1975	while (( i < iin ))
	1976	do
	1977	(( i = i + 1 ))
	1978	if (( i == 1 ))
	1979	then
	1980	printf "\n\n >>> INPUT-file assignments:\n"
	1981	fi
	1982	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	1983	done
	1984	(( i = 0 ))
	1985	while (( i < iout ))
	1986	do
	1987	(( i = i + 1 ))
	1988	if (( i == 1 ))
	1989	then
	1990	printf "\n\n >>> OUTPUT-file assignments:\n"
	1991	fi
	1992	printf "\n ${localout[$i]} : ${pathout[$i]}"
	1993	done
	1994	(( i = 0 ))
	1995	while (( i < iic ))
	1996	do
	1997	(( i = i + 1 ))
	1998	if (( i == 1 ))
	1999	then
	2000	printf "\n\n >>> INPUT-commands:\n"
	2001	fi
	2002	printf "\n ${in_command[$i]}"
	2003	done
	2004	(( i = 0 ))
	2005	while (( i < ioc ))
	2006	do
	2007	(( i = i + 1 ))
	2008	if (( i == 1 ))
	2009	then
	2010	printf "\n\n >>> OUTPUT-commands:\n"
	2011	fi
	2012	printf "\n ${out_command[$i]}"
	2013	done
	2014	fi
	2015
	2016
	2017	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2018	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2019	then
	2020	antwort=dummy
	2021	printf "\n\n"
	2022	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2023	do
	2024	printf " >>> everything o.k. (y/n) ? "
	2025	read antwort
	2026	done
	2027	if [[ $antwort = n \|\| $antwort = N ]]
	2028	then
	2029	locat=user_abort; (( iec = 0 )); exit
	2030	fi
	2031	if [[ $do_batch = true ]]
	2032	then
	2033	printf " >>> batch-job will be created and submitted"
	2034	else
	2035	if [[ $local_compile = false ]]
	2036	then
	2037	printf " >>> MRUN will now continue to execute on this machine"
	2038	else
	2039	printf " >>> a test compilation will now be carried out on this machine"
	2040	fi
	2041	fi
	2042	fi
	2043
	2044
	2045
	2046
	2047	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2048	# CHENDE AKTIONEN DURCHGEFUEHRT
	2049	if [[ $do_batch = false ]]
	2050	then
	2051
	2052
	2053	# TEMPORAEREN KATALOG ERZEUGEN
	2054	mkdir -p $TEMPDIR
	2055	chmod go+rx $TEMPDIR
	2056	tmpcreate=true
	2057
	2058
	2059	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2060	# TEMPORAERES VERZEICHNIS KOPIEREN
	2061	if [[ $do_compile = true ]]
	2062	then
	2063
	2064	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2065	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2066	if [[ $localhost = nech ]]
	2067	then
	2068	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2069	if mkdir -p $TEMPDIR_COMPILE
	2070	then
	2071	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2072	printf "\n is generated as temporary directory for cross compiling\n"
	2073	else
	2074	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2075	printf "\n needed for cross compilation failed"
	2076	locat=compile
	2077	exit
	2078	fi
	2079	else
	2080	TEMPDIR_COMPILE=$TEMPDIR
	2081	fi
	2082
	2083
[82]	2084	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2085	line=""
	2086	grep "%depository_path" $config_file > tmp_mrun
	2087	while read line
	2088	do
	2089	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2090	then
	2091	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2092	then
[82]	2093	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2094	fi
[82]	2095	fi
	2096	done < tmp_mrun
[1]	2097
[82]	2098	line=""
	2099	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2100	while read line
	2101	do
	2102	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2103	then
[82]	2104	local_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2105	fi
[82]	2106	done < tmp_mrun
[1]	2107
[82]	2108	if [[ "$local_depository_path" = "" ]]
	2109	then
	2110	if [[ "$global_depository_path" != "" ]]
[1]	2111	then
[82]	2112	local_depository_path=$global_depository_path
[1]	2113	else
[82]	2114	printf "\n\n +++ no depository path found in configuration file"
	2115	printf "\n for local host \"$localhost\" "
	2116	printf "\n please set \"\%depository_path\" in configuration file\n"
	2117	locat=config_file; exit
[1]	2118	fi
[82]	2119	fi
	2120	eval local_depository_path=$local_depository_path
[1]	2121
[82]	2122	basename=`print $mainprog \| cut -f1 -d"."`
	2123	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2124	if [[ ! -f $make_depository ]]
	2125	then
	2126	printf "\n"
	2127	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2128	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2129	else
	2130	cp $make_depository $TEMPDIR_COMPILE
[1]	2131	cd $TEMPDIR_COMPILE
[82]	2132	tar -xf $make_depository > /dev/null 2>&1
[1]	2133	cd - > /dev/null
	2134	fi
[82]	2135
	2136	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2137
	2138	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2139	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2140	# MAKEFILE EINTRAGEN
	2141	cd $TEMPDIR_COMPILE
	2142	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2143	if [[ "$interface_file" != "" ]]
	2144	then
	2145	interface_file=`echo $interface_file \| cut -d"." -f1`
	2146	mv Makefile Makefile_old
	2147	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2148	fi
	2149	cd - > /dev/null
[1]	2150	else
	2151	cp $executable ${TEMPDIR}/a.out
	2152	fi
	2153
	2154
	2155	# WECHSEL IN TEMPORAEREN KATALOG
	2156	cd $TEMPDIR
	2157	printf "\n *** changed to temporary directory: $TEMPDIR"
	2158
	2159
	2160	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2161	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2162	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2163	# ERMITTELN
	2164	(( i = 0 ))
	2165	while (( i < iout ))
	2166	do
	2167	(( i = i + 1 ))
	2168	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2169	then
	2170	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2171	else
	2172	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2173	fi
	2174	done
	2175
	2176
	2177	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2178	if [[ $do_compile = true ]]
	2179	then
	2180
	2181
	2182	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2183	printf "\n\n\n *** compilation starts \n$striche\n"
	2184	printf " *** compilation with make using following options:\n"
	2185	printf " compilername: $compiler_name\n"
	2186	printf " options: $fopts\n"
	2187	printf " preprocessor-directives: $cpp_options \n"
	2188	printf " linker-options: $lopts \n"
	2189	printf " source code files: $source_list \n"
	2190
	2191	if [[ $localhost = nech ]]
[1]	2192	then
[82]	2193	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2194	cp $TEMPDIR_COMPILE/a.out .
	2195	[[ $? != 0 ]] && compile_error=true
	2196	rm -rf $TEMPDIR_COMPILE
[1]	2197	else
[82]	2198	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
	2199	fi
[1]	2200
	2201	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2202	then
	2203	printf "\n +++ error occured while compiling or linking"
	2204	locat=compile
	2205	exit
	2206	else
	2207	printf "$striche\n *** compilation finished \n"
	2208	fi
	2209	fi
	2210
	2211
	2212	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2213	if [[ $local_compile = true ]]
	2214	then
	2215	cd $HOME
	2216	rm -rf $TEMPDIR
	2217	locat=local_compile; exit
	2218	fi
	2219
	2220
	2221	# BEREITSTELLEN DER INPUT-DATEIEN
	2222	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2223	(( i = 0 ))
	2224	while (( i < iin ))
	2225	do
	2226	(( i = i + 1 ))
	2227	if (( i == 1 ))
	2228	then
	2229	printf "\n\n *** providing INPUT-files:\n$striche"
	2230	fi
	2231
	2232
	2233	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2234	if [[ "${transin[$i]}" = unavailable ]]
	2235	then
	2236	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2237	then
	2238	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2239	printf "\n is not available!"
	2240	else
	2241	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2242	printf "\n is not available!"
	2243	fi
	2244	continue
	2245	fi
	2246
	2247	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2248	files_for_pes=false; datentyp=file
	2249	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2250	then
	2251	files_for_pes=true; datentyp=directory
	2252	actionin[$i]=""
	2253	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2254	then
	2255	actionin[$i]=""
	2256	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2257	then
	2258	files_for_pes=true; datentyp=directory
	2259	actionin[$i]="ar"
	2260	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2261	then
	2262	actionin[$i]="ar"
	2263	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2264	then
	2265	files_for_pes=true; datentyp=directory
	2266	actionin[$i]="fl"
	2267	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2268	then
	2269	actionin[$i]="fl"
	2270	fi
	2271
	2272	if [[ $files_for_pes = true ]]
	2273	then
	2274	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2275	else
	2276	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2277	fi
	2278
	2279	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2280	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2281	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2282	# SERVER ZU HOLEN
	2283	if [[ "${actionin[$i]}" = fl ]]
	2284	then
	2285	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2286	if [[ $files_for_pes = false ]]
	2287	then
	2288	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2289	then
	2290	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2291	got_tmp[$i]=true
	2292	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2293	then
	2294	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2295	printf "\n *** trying to use backup copy in \"$WORK\" "
	2296	cp $WORK/${frelin[$i]} ${localin[$i]}
	2297	else
	2298	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2299	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2300	printf "\n *** trying to get copy from archive"
	2301	actionin[$i]=ar
	2302	fi
	2303	else
	2304	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2305	then
	2306	mkdir ${localin[$i]}
	2307	ln $tmp_data_catalog/${frelin[$i]}/* ${localin[$i]}
	2308	got_tmp[$i]=true
	2309	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2310	then
	2311	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2312	printf "\n *** trying to use backup copy in \"$WORK\" "
	2313	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2314	else
	2315	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2316	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2317	printf "\n *** trying to get copy from archive"
	2318	actionin[$i]=ar
	2319	fi
	2320	fi
	2321	fi
	2322
	2323
	2324	# DATEI LIEGT AUF ARCHIV-SERVER
	2325	if [[ "${actionin[$i]}" = ar ]]
	2326	then
	2327
	2328	if [[ $files_for_pes = false ]]
	2329	then
	2330	printf "\n file will be restored from archive-system ($archive_system)!"
	2331	else
	2332	printf "\n directory will be restored from archive-system ($archive_system)!"
	2333	fi
	2334
	2335	file_restored=false
	2336
	2337	if [[ $archive_system = asterix ]]
	2338	then
	2339	do_stagein=true
	2340	(( stagein_anz = 0 ))
	2341	while [[ $do_stagein = true ]]
	2342	do
	2343	if [[ $files_for_pes = false ]]
	2344	then
	2345	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2346	else
	2347	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2348	fi
	2349	cat STAGEIN_OUTPUT
	2350	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2351	then
	2352	file_restored=true
	2353	do_stagein=false
	2354	else
	2355	(( stagein_anz = stagein_anz + 1 ))
	2356	if (( stagein_anz == 10 ))
	2357	then
	2358	printf "\n +++ stagein stoped after 10 tries"
	2359	locat=stage
	2360	exit
	2361	fi
	2362	printf "\n +++ restoring from archive failed, trying again:"
	2363	sleep 900
	2364	fi
	2365	done
	2366	elif [[ $archive_system = DMF ]]
	2367	then
	2368	if [[ $files_for_pes = false ]]
	2369	then
	2370	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2371	locat=DMF
	2372	exit
	2373	else
	2374	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2375	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2376	file_restored=true
	2377	fi
	2378	elif [[ $archive_system = tivoli ]]
	2379	then
	2380	if [[ $files_for_pes = false ]]
	2381	then
	2382	if [[ $localhost = ibmh ]]
	2383	then
	2384	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2385	else
	2386	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2387	fi
	2388	else
	2389	(( inode = 0 ))
	2390	while (( inode < nodes ))
	2391	do
	2392	if [[ $localhost = ibmh ]]
	2393	then
	2394	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2395	else
	2396	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2397	fi
	2398	(( inode = inode + 1 ))
	2399	done
	2400	fi
	2401	file_restored=true
	2402	elif [[ $archive_system = ut ]]
	2403	then
	2404	if [[ $files_for_pes = false ]]
	2405	then
	2406	cp $UT/${frelin[$i]} .
	2407	else
	2408	(( inode = 0 ))
	2409	while (( inode < nodes ))
	2410	do
	2411	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2412	(( inode = inode + 1 ))
	2413	done
	2414	fi
	2415	file_restored=true
	2416	else
	2417	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2418	locat=rearchive
	2419	exit
	2420	fi
	2421
	2422	if [[ $file_restored = true ]]
	2423	then
	2424
	2425	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2426	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2427	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2428	if [[ $files_for_pes = false ]]
	2429	then
	2430	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2431	else
	2432	mkdir $tmp_data_catalog/${frelin[$i]}
	2433	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2434	fi
	2435	got_tmp[$i]=true
	2436
	2437	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2438	mv ${frelin[$i]} ${localin[$i]}
	2439
	2440	fi
	2441	fi
	2442
	2443
	2444	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2445	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2446	then
	2447
	2448	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2449	then
	2450
	2451	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2452	printf "\n file will be provided for $numprocs processors"
	2453	mkdir ${localin[$i]}
	2454	ival=$numprocs
	2455	(( ii = 0 ))
	2456	while (( ii <= ival-1 ))
	2457	do
	2458	if (( ii < 10 ))
	2459	then
	2460	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2461	elif (( ii < 100 ))
	2462	then
	2463	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2464	elif (( ii < 1000 ))
	2465	then
	2466	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2467	else
	2468	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2469	fi
	2470	(( ii = ii + 1 ))
	2471	done
	2472
	2473	else
	2474
	2475	if [[ $files_for_pes = true ]]
	2476	then
	2477
	2478	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2479	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2480	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2481	# PER MOVE UMBENANNT WERDEN
	2482	printf "\n providing $numprocs files for the respective processors"
	2483	mkdir ${localin[$i]}
	2484	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2485
	2486	else
	2487	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
	2488	cp ${absnamein[$i]} ${localin[$i]}
	2489	fi
	2490	fi
	2491	fi
	2492
	2493	done
	2494	if (( i != 0 ))
	2495	then
	2496	printf "\n$striche\n *** all INPUT-files provided \n"
	2497	fi
	2498
	2499
	2500	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2501	# LESEN VON PALM)
	2502	cat > ENVPAR << %%END%%
	2503	&envpar run_identifier = '$fname', host = '$localhost',
	2504	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
[75]	2505	maximum_cpu_time_allowed = ${cpumax}.,
	2506	revision = '$global_revision' /
[1]	2507
	2508	%%END%%
	2509
	2510
	2511	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2512	(( i = 0 ))
	2513	while (( i < iic ))
	2514	do
	2515	(( i = i + 1 ))
	2516	if (( i == 1 ))
	2517	then
	2518	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2519	fi
	2520	printf "\n >>> ${in_command[$i]}"
	2521	eval ${in_command[$i]}
	2522	if (( i == iic ))
	2523	then
	2524	printf "\n$striche\n"
	2525	fi
	2526	done
	2527
	2528
	2529	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2530	cpurest=${cpumax}.
	2531
	2532
	2533	# PROGRAMMSTART
	2534	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2535	PATH=$PATH:$TEMPDIR
	2536
	2537	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2538	then
	2539	if [[ "$ENVIRONMENT" = BATCH ]]
	2540	then
	2541	printf "\n +++ debug is allowed in interactive mode only"
	2542	locat=debug
	2543	exit
	2544	fi
[5]	2545	if [[ $localhost = decalpha ]]
[1]	2546	then
	2547	dxladebug a.out
	2548	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2549	then
	2550
	2551	# SETUP THE IBM MPI ENVIRONMENT
	2552	export MP_SHARED_MEMORY=yes
	2553	export AIXTHREADS_SCOPE=S
	2554	export OMP_NUM_THREADS=$threads_per_task
	2555	export AUTHSTATE=files
	2556	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2557
	2558	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2559	export MP_ADAPTER_USE=shared
	2560	export MP_CPU_USE=multiple
	2561	export MP_TIMEOUT=1200
	2562
	2563	unset MP_TASK_AFFINITY
	2564
	2565	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2566	#(( ii = 1 ))
	2567	#while (( ii <= $numprocs ))
	2568	#do
	2569	# echo $localhost_realname >> hostfile
	2570	# (( ii = ii + 1 ))
	2571	#done
	2572	#export MP_HOSTFILE=hostfile
	2573
	2574	if [[ "$LOADLBATCH" = yes ]]
	2575	then
	2576	totalview poe a.out $ROPTS
	2577	else
	2578	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2579	export TVDSVRLAUNCHCMD=ssh
	2580	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2581	fi
	2582	else
	2583	printf "\n +++ no debug available on \"$localhost\" "
	2584	printf "\n or not implemented in mrun so far"
	2585	locat=debug
	2586	exit
	2587	fi
	2588	else
	2589	if [[ -n $numprocs ]]
	2590	then
	2591
	2592	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2593	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2594	then
	2595	# SETUP THE IBM MPI ENVIRONMENT
	2596	export MP_SHARED_MEMORY=yes
	2597	export AIXTHREAD_SCOPE=S
	2598	export OMP_NUM_THREADS=$threads_per_task
	2599	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2600	export AUTHSTATE=files
	2601	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2602	# export MP_PRINTENV=yes
	2603
	2604	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2605	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2606	export MP_WAIT_MODE=poll
	2607	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2608	# export MP_EAGER_LIMIT=65535
	2609
	2610	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2611	# export MPJ_MTAB=128
	2612	# export MPJ_ALLTOALL=1
	2613	# export MPJ_ALLTOALLV=1
	2614
	2615	if [[ "$LOADLBATCH" = yes ]]
	2616	then
	2617	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2618	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2619	then
	2620	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS > aout_output 2>&1
	2621	else
	2622	poe ./a.out $ROPTS > aout_output 2>&1
	2623	fi
	2624	else
	2625	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2626	then
	2627	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS > aout_output 2>&1
	2628	elif [[ $localhost = ibmy ]]
	2629	then
	2630	if [[ -f $hostfile ]]
	2631	then
	2632	cp $hostfile hostfile
	2633	else
	2634	(( ii = 1 ))
	2635	while (( ii <= $numprocs ))
	2636	do
	2637	echo $localhost_realname >> hostfile
	2638	(( ii = ii + 1 ))
	2639	done
	2640	fi
	2641	export MP_HOSTFILE=hostfile
	2642	./a.out -procs $tasks_per_node $ROPTS > aout_output 2>&1
	2643	else
	2644	if [[ "$host_file" = "" ]]
	2645	then
	2646	printf "\n +++ no hostfile given in configuration file"
	2647	locat=config_file
	2648	exit
	2649	else
	2650	eval host_file=$host_file
	2651	fi
	2652	export MP_HOSTFILE=$host_file
	2653	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS > aout_output 2>&1
	2654	fi
	2655	fi
	2656	elif [[ $host = nech \|\| $host = neck ]]
	2657	then
	2658	(( ii = nodes ))
	2659	if [[ $ii = 1 ]]
	2660	then
	2661	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	2662	export MPIPROGINF=YES
[61]	2663	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	2664	echo "*** execution on single node with mpirun"
	2665	mpirun -np $numprocs ./a.out $ROPTS > aout_output 2>&1
	2666	else
	2667	(( i = 0 ))
	2668	while (( i < ii ))
	2669	do
	2670	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	2671	(( i = i + 1 ))
	2672	done
	2673
	2674	echo "#!/bin/sh" > mpi_exec_shell
	2675	echo " " >> mpi_exec_shell
	2676	echo "set -u" >> mpi_exec_shell
	2677	echo "F_ERRCNT=0" >> mpi_exec_shell
	2678	echo "MPIPROGINV=YES" >> mpi_exec_shell
	2679	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	2680	echo "cpurest=$cpurest" >> mpi_exec_shell
	2681	echo "fname=$fname" >> mpi_exec_shell
	2682	echo "localhost=$localhost" >> mpi_exec_shell
	2683	echo "return_addres=$return_addres" >> mpi_exec_shell
	2684	echo "return_username=$return_username" >> mpi_exec_shell
	2685	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	2686	echo "write_binary=$write_binary" >> mpi_exec_shell
	2687	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2688	echo " " >> mpi_exec_shell
	2689	echo "export F_ERRCNT" >> mpi_exec_shell
	2690	echo "export MPIPROGINV" >> mpi_exec_shell
	2691	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	2692	echo "export cpurest" >> mpi_exec_shell
	2693	echo "export fname" >> mpi_exec_shell
	2694	echo "export localhost" >> mpi_exec_shell
	2695	echo "export return_addres" >> mpi_exec_shell
	2696	echo "export return_username" >> mpi_exec_shell
	2697	echo "export tasks_per_node" >> mpi_exec_shell
	2698	echo "export write_binary" >> mpi_exec_shell
	2699	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2700	echo " " >> mpi_exec_shell
	2701	echo "exec ./a.out > aout_output 2>&1" >> mpi_exec_shell
	2702
	2703	chmod u+x mpi_exec_shell
	2704	export MPIPROGINF=YES
	2705	mpirun -f multinode_config &
	2706	wait
	2707
	2708	fi
[82]	2709	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
[1]	2710	then
	2711
	2712	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	2713	# DOES NOT EXIST
	2714	if [[ -f $hostfile ]]
	2715	then
	2716	cp $hostfile hostfile
	2717	else
	2718	(( ii = 1 ))
	2719	while (( ii <= $numprocs / $threads_per_task ))
	2720	do
	2721	echo $localhost_realname >> hostfile
	2722	(( ii = ii + 1 ))
	2723	done
	2724	fi
	2725	(( ii = $numprocs / $threads_per_task ))
	2726	eval zeile=\"`head -n $ii hostfile`\"
	2727	printf "\n *** running on: $zeile"
	2728	export OMP_NUM_THREADS=$threads_per_task
	2729	if [[ $threads_per_task != 1 ]]
	2730	then
	2731	printf "\n threads per task: $threads_per_task"
	2732	fi
	2733	printf "\n\n"
	2734	if [[ $scirocco = true ]]
	2735	then
	2736	mpiexec -machinefile hostfile -n $ii a.out $ROPTS > aout_output 2>&1
	2737	else
	2738	mpirun -machinefile hostfile -np $ii a.out $ROPTS > aout_output 2>&1
	2739	fi
	2740	elif [[ $host = decalpha ]]
	2741	then
	2742	dmpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
	2743	elif [[ $host = lctit ]]
	2744	then
	2745	export runfile=runfile.$kennung
	2746
	2747	echo "cd $PWD" > $runfile
	2748	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	2749	echo "export cpurest=$cpurest" >> $runfile
	2750	echo "export fname=$fname" >> $runfile
	2751	echo "export localhost=$localhost" >> $runfile
	2752	echo "export return_addres=$return_addres" >> $runfile
	2753	echo "export return_username=$return_username" >> $runfile
	2754	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	2755	echo "export write_binary=$write_binary" >> $runfile
	2756	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	2757	echo "./a.out" >> $runfile
	2758	chmod u+x $runfile
	2759
	2760	if [[ "$QUEUE" = interactive ]]
	2761	then
[69]	2762	mpirun -np $numprocs a.out $ROPTS > aout_output 2>&1
[1]	2763	else
[76]	2764	n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS > aout_output 2>&1
[1]	2765	fi
	2766
	2767	rm $runfile
	2768	else
	2769	mpprun -n $numprocs a.out $ROPTS > aout_output 2>&1
	2770	fi
	2771	[[ $? != 0 ]] && execution_error=true
	2772
	2773
	2774	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	2775	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	2776	then
	2777	apprentice
	2778	fi
	2779	else
	2780	a.out $ROPTS > aout_output 2>&1
	2781	fi
	2782	fi
	2783	if [[ $? != 0 \|\| $execution_error = true ]]
	2784	then
	2785
	2786	# ABBRUCH BEI LAUFZEITFEHLER
	2787	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
	2788	printf "\n +++ runtime error occured"
	2789	locat=execution
	2790	exit
	2791	else
	2792	[[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output
	2793	printf "\n$striche\n *** execution finished \n"
	2794	fi
	2795
	2796
	2797
	2798	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	2799	(( i = 0 ))
	2800	while (( i < ioc ))
	2801	do
	2802	(( i = i + 1 ))
	2803	if (( i == 1 ))
	2804	then
	2805	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	2806	fi
	2807	printf "\n >>> ${out_command[$i]}"
	2808	eval ${out_command[$i]}
	2809	if (( i == ioc ))
	2810	then
	2811	printf "\n$striche\n"
	2812	fi
	2813	done
	2814
	2815
	2816	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	2817	if [[ $do_trace = true ]]
	2818	then
	2819	printf "\n\n"
	2820	ls -al
	2821	fi
	2822
	2823
	2824
	2825	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	2826	(( i = 0 ))
	2827	while (( i < iout ))
	2828	do
	2829	(( i = i + 1 ))
	2830	if (( i == 1 ))
	2831	then
	2832	printf "\n\n *** saving OUTPUT-files:\n$striche"
	2833	fi
	2834
	2835	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2836	files_for_pes=false; filetyp=file
	2837	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	2838	then
	2839	files_for_pes=true; filetyp=directory
	2840	actionout[$i]=""
	2841	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	2842	then
	2843	actionout[$i]=""
	2844	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	2845	then
	2846	files_for_pes=true; filetyp=directory
	2847	actionout[$i]="ar"
	2848	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	2849	then
	2850	actionout[$i]="ar"
	2851	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	2852	then
	2853	files_for_pes=true; filetyp=directory
	2854	actionout[$i]="fl"
	2855	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	2856	then
	2857	actionout[$i]="fl"
	2858	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	2859	then
	2860	files_for_pes=true; filetyp=directory
	2861	actionout[$i]="tr"
	2862	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	2863	then
	2864	actionout[$i]="tr"
	2865	fi
	2866
	2867	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	2868	then
	2869	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
	2870	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
	2871	then
	2872	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	2873	else
	2874
	2875
	2876	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	2877	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	2878	# REMOTE-RECHNUNGEN
	2879	if [[ "${actionout[$i]}" = tr ]]
	2880	then
	2881	if [[ $localhost != $fromhost ]]
	2882	then
	2883	if [[ $files_for_pes = false ]]
	2884	then
	2885	cps=""
	2886	cst=""
	2887	else
	2888	cps=-c
	2889	cst="/"
	2890	fi
	2891	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	2892	then
	2893
	2894	# TRANSFER IN EIGENSTAENDIGEM JOB
	2895	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	2896	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	2897	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	2898	if [[ $files_for_pes = false ]]
	2899	then
	2900	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	2901	else
	2902	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	2903	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	2904	fi
	2905
	2906	echo "set -x" > transfer_${localout[$i]}
	2907	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	2908
	2909	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	2910	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	2911	printf "\n or higher cycle\n"
	2912	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	2913
[1]	2914	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	2915
	2916	if [[ $localhost = nech ]]
	2917	then
[82]	2918	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	2919	else
	2920	if [[ "$LOGNAME" = b323013 ]]
	2921	then
[82]	2922	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	2923	else
[82]	2924	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	2925	fi
	2926	fi
	2927
	2928	else
	2929
	2930	# TRANSFER INNERHALB DIESES JOBS
	2931	transfer_failed=false
[82]	2932	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	2933	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	2934	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	2935	[[ $? != 0 ]] && transfer_failed=true
[1]	2936
	2937	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	2938	# LOKALER MASCHINE ANLEGEN
	2939	if [[ $transfer_failed = true ]]
	2940	then
	2941	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	2942	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	2943
	2944	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	2945	# ANLEGEN.
	2946	eval local_catalog=${pathout[$i]}
	2947	if [[ ! -d $local_catalog ]]
	2948	then
	2949	printf " *** local directory does not exist. Trying to create:\n"
	2950	printf " $local_catalog \n"
	2951	mkdir -p $local_catalog
	2952	fi
	2953	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	2954	transfer_problems=true
	2955	fi
	2956	fi
	2957	else
	2958
	2959	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	2960	actionout[$i]=""
	2961	fi
	2962	fi
	2963
	2964
	2965	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	2966	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	2967	# REMOTE-RECHNUNGEN
	2968	if [[ "${actionout[$i]}" = tra ]]
	2969	then
	2970	if [[ $localhost != $fromhost ]]
	2971	then
	2972	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	2973	then
	2974
	2975	# TRANSFER IN EIGENSTAENDIGEM JOB
	2976	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	2977	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	2978	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	2979	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	2980
	2981	echo "set -x" > transfer_${localout[$i]}
	2982	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	2983
	2984	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	2985	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	2986	printf "\n or higher cycle\n"
	2987	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	2988
[1]	2989	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	2990
	2991	if [[ $localhost = nech ]]
	2992	then
[82]	2993	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	2994	else
	2995	if [[ $LOGNAME = b323013 ]]
	2996	then
[82]	2997	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	2998	else
[82]	2999	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3000	fi
	3001	fi
	3002
	3003	else
	3004
	3005	# TRANSFER INNERHALB DIESES JOBS
	3006	transfer_failed=false
[82]	3007	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3008	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3009	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3010	[[ $? != 0 ]] && transfer_failed=true
[1]	3011
	3012	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3013	# LOKALER MASCHINE ANLEGEN
	3014	if [[ $transfer_failed = true ]]
	3015	then
	3016	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3017	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3018
	3019	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3020	# ANLEGEN
	3021	eval local_catalog=${pathout[$i]}
	3022	if [[ ! -d $local_catalog ]]
	3023	then
	3024	printf " *** local directory does not exist. Trying to create:\n"
	3025	printf " $local_catalog \n"
	3026	mkdir -p $local_catalog
	3027	fi
	3028
	3029	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3030	transfer_problems=true
	3031	fi
	3032	fi
	3033	else
	3034
	3035	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3036	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3037	actionout[$i]=a
	3038	fi
	3039	fi
	3040
	3041
	3042	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3043	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3044	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3045	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3046	if [[ "${actionout[$i]}" = fl ]]
	3047	then
	3048	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3049	chmod g+rx $tmp_data_catalog
	3050	if [[ $files_for_pes = false ]]
	3051	then
	3052	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3053	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3054	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3055	else
	3056	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3057	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3058	mkdir $tmp_data_catalog/${frelout[$i]}
	3059	ln -f ${localout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3060	fi
	3061
	3062
	3063	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3064	if [[ $store_on_archive_system = true ]]
	3065	then
	3066
	3067	if [[ $archive_system = asterix ]]
	3068	then
	3069	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3070	if [[ $files_for_pes = false ]]
	3071	then
	3072	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3073	else
	3074	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3075	fi
	3076	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3077	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3078	echo "then" >> archive_${frelout[$i]}
	3079	echo " do_stageout=false" >> archive_${frelout[$i]}
	3080	echo "else" >> archive_${frelout[$i]}
	3081	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3082	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3083	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3084	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3085	if [[ $files_for_pes = false ]]
	3086	then
	3087	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3088	else
	3089	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3090	fi
	3091	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3092	echo "fi" >> archive_${frelout[$i]}
	3093	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3094	elif [[ $archive_system = DMF ]]
	3095	then
	3096	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3097	if [[ $files_for_pes = false ]]
	3098	then
	3099	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3100	locat=DMF
	3101	exit
	3102	else
	3103	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3104	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3105	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3106	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3107	fi
	3108	elif [[ $archive_system = tivoli ]]
	3109	then
	3110	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3111	if [[ $files_for_pes = false ]]
	3112	then
	3113	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3114	echo "set -x" >> archive_${frelout[$i]}
	3115	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3116	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3117	else
	3118
	3119	echo "set -x" >> archive_${frelout[$i]}
	3120	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3121	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3122	cd $tmp_data_catalog
	3123	all_files=`ls -1 ${frelout[$i]}/*`
	3124	cd - > /dev/null
	3125	(( inode = 0 ))
	3126	(( tp1 = tasks_per_node + 1 ))
	3127	while (( inode < nodes ))
	3128	do
	3129	# echo "*** all_files = \"$all_files\" "
	3130	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3131	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3132	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3133	# echo "*** files = \"$files\" "
	3134	# echo "*** all_files = \"$all_files\" "
	3135	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3136	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3137	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3138	(( inode = inode + 1 ))
	3139	done
	3140	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3141	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3142	fi
	3143	elif [[ $archive_system = ut ]]
	3144	then
	3145	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3146	if [[ $files_for_pes = false ]]
	3147	then
	3148	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3149	echo "set -x" >> archive_${frelout[$i]}
	3150	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3151	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3152	else
	3153
	3154	echo "set -x" >> archive_${frelout[$i]}
	3155	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3156	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3157	cd $tmp_data_catalog
	3158	all_files=`ls -1 ${frelout[$i]}/*`
	3159	cd - > /dev/null
	3160	(( inode = 0 ))
	3161	(( tp1 = tasks_per_node + 1 ))
	3162	while (( inode < nodes ))
	3163	do
	3164	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3165	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3166	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3167	(( inode = inode + 1 ))
	3168	done
	3169	fi
	3170	elif [[ $archive_system = none ]]
	3171	then
	3172	printf " +++ archiving on $localhost not available!\n"
	3173	fi
	3174
	3175	if [[ $archive_system != none ]]
	3176	then
	3177	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3178	then
[97]	3179	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
	3180	subjob -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
[1]	3181	elif [[ $localhost = nech ]]
	3182	then
[82]	3183	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3184	fi
	3185	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3186	fi
	3187	else
	3188	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3189	fi
	3190
	3191
	3192	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3193	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3194	if [[ $files_for_pes = false ]]
	3195	then
	3196	cat /dev/null > ${pathout[$i]}
	3197	else
	3198	mkdir -p ${pathout[$i]}
	3199	fi
	3200
	3201	fi
	3202
	3203
	3204	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3205	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3206	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3207	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3208	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3209	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3210	if [[ "${actionout[$i]}" = ar ]]
	3211	then
	3212	if [[ $files_for_pes = false ]]
	3213	then
	3214	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3215	printf "\n ${pathout[$i]}"
	3216	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3217	else
	3218	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3219	printf "\n ${pathout[$i]}"
	3220	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3221	fi
	3222	mv ${localout[$i]} ${frelout[$i]}
	3223
	3224	file_saved=false
	3225
	3226	if [[ $archive_system = asterix ]]
	3227	then
	3228	do_stageout=true
	3229	(( stageout_anz = 0 ))
	3230	while [[ $do_stageout = true ]]
	3231	do
	3232	if [[ $files_for_pes = false ]]
	3233	then
	3234	stageout ${frelout[$i]} > STAGE_OUTPUT
	3235	else
	3236	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3237	fi
	3238	cat STAGE_OUTPUT
	3239	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3240	then
	3241	file_saved=true
	3242	do_stageout=false
	3243	else
	3244	if [[ $files_for_pes = false ]]
	3245	then
	3246	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3247	else
	3248	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3249	fi
	3250	(( stageout_anz = stageout_anz + 1 ))
	3251	if (( stageout_anz == 10 ))
	3252	then
	3253	printf "\n +++ stoped after 10 unsuccessful tries!"
	3254	archive_save=false
	3255	do_stageout=false
	3256	else
	3257	printf "\n *** new try to store on archive after 15 min:"
	3258	sleep 900
	3259	fi
	3260	fi
	3261	done
	3262	elif [[ $archive_system = DMF ]]
	3263	then
	3264	if [[ $files_for_pes = false ]]
	3265	then
	3266	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3267	locat=DMF
	3268	exit
	3269	else
	3270	rm -rf $ARCHIVE/${frelout[$i]}
	3271	cp -r ${frelout[$i]} $ARCHIVE
	3272	fi
	3273	file_saved=true
	3274	elif [[ $archive_system = tivoli ]]
	3275	then
	3276	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3277	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3278	# GELEGT WERDEN
	3279	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3280	chmod g+rx $tmp_data_catalog
	3281	if [[ $files_for_pes = false ]]
	3282	then
	3283	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3284	else
	3285	mkdir $tmp_data_catalog/${frelout[$i]}
	3286	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3287	fi
	3288
	3289	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3290	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3291	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3292	if [[ $files_for_pes = false ]]
	3293	then
	3294	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3295	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3296	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3297	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3298	else
	3299	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3300	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3301	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3302	fi
	3303
[97]	3304	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
[1]	3305	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3306	file_saved=true
	3307
	3308	elif [[ $archive_system = ut ]]
	3309	then
	3310	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3311	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3312	# GELEGT WERDEN
	3313	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3314	chmod g+rx $tmp_data_catalog
	3315	if [[ $files_for_pes = false ]]
	3316	then
	3317	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3318	else
	3319	mkdir $tmp_data_catalog/${frelout[$i]}
	3320	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3321	fi
	3322
	3323	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3324	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3325	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3326	if [[ $files_for_pes = false ]]
	3327	then
	3328	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3329	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3330	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3331	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3332	else
	3333	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3334	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3335	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3336	fi
	3337
[82]	3338	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3339	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3340	file_saved=true
	3341
	3342	else
	3343	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3344	archive_save=false
	3345	fi
	3346	if [[ $file_saved = true ]]
	3347	then
	3348	if [[ $files_for_pes = false ]]
	3349	then
	3350	cat /dev/null > ${pathout[$i]}
	3351	else
	3352	mkdir -p ${pathout[$i]}
	3353	fi
	3354	fi
	3355	fi
	3356
	3357	# APPEND AUF LOKALER MASCHINE
	3358	if [[ "${actionout[$i]}" = "a" ]]
	3359	then
	3360	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3361	cat ${localout[$i]} >> ${pathout[$i]}
	3362	fi
	3363
	3364	# KOPIEREN AUF LOKALER MASCHINE
	3365	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3366	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3367	then
	3368
	3369	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3370	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3371	then
	3372	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
	3373	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3374	else
	3375	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
	3376	cp ${localout[$i]} ${pathout[$i]}
	3377	fi
	3378
	3379	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3380	then
	3381
	3382	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3383	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3384	# WIRD DANN KOPIERT
	3385	# PER MOVE UMBENANNT WERDEN
	3386	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
	3387	cp -r ${localout[$i]} ${pathout[$i]}
	3388
	3389	fi
	3390	fi
	3391	done
	3392	if (( i != 0 ))
	3393	then
	3394	if [[ $transfer_problems = true ]]
	3395	then
	3396	printf "\n$striche\n *** OUTPUT-files saved"
	3397	printf "\n +++ WARNING: some data transfers failed! \n"
	3398	else
	3399	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3400	fi
	3401	fi
	3402
	3403
	3404	# EVENTUELL FOLGEJOB STARTEN
	3405	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3406	if [[ -f CONTINUE_RUN ]]
	3407	then
	3408
	3409	if [[ $archive_save = true ]]
	3410	then
	3411
	3412	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3413	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3414	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3415	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3416	# HANDEN
	3417	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3418	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3419	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3420	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3421	then
	3422	mc=`echo $mc \| sed 's/#/f/g'`
	3423	fi
	3424
	3425
	3426	# JOB STARTEN
	3427	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3428	echo " $mc"
	3429	printf "\n$striche\n"
	3430	if [[ $localhost != $fromhost ]]
	3431	then
	3432
	3433	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
	3434	then
	3435	echo "*** ssh will be used to initiate restart-runs!"
	3436	echo " return_addres=\"$return_addres\" "
	3437	echo " return_username=\"$return_username\" "
	3438	if [[ $return_addres = 172.20.25.41 ]]
	3439	then
	3440	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3441	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3442	else
[33]	3443	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3444	fi
	3445	else
	3446	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3447	locat=restart; exit
	3448	fi
	3449
	3450	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3451	# DER AKTUELLE JOB ENDET
	3452	sleep 30
	3453
	3454	else
	3455
	3456	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
	3457	# RUFEN WERDEN
	3458	cd $LOCAL_PWD
	3459	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	3460	cd - > /dev/null
	3461	fi
	3462	printf "\n$striche\n *** restart-run initiated \n"
	3463
	3464
	3465	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	3466	# GEHOLT WORDEN SIND, LOESCHEN
	3467	(( i = 0 ))
	3468	while (( i < iin ))
	3469	do
	3470	(( i = i + 1 ))
	3471	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	3472	then
	3473	rm -r $tmp_data_catalog/${frelin[$i]}
	3474	fi
	3475	done
	3476
	3477	else
	3478
	3479	printf "\n +++ no restart-run possible, since errors occured"
	3480	printf "\n during the archive process"
	3481	fi
	3482
	3483	fi
	3484
	3485
	3486
	3487	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	3488	if [[ "$email_notification" != "" ]]
	3489	then
	3490
	3491	if [[ $localhost != $fromhost ]]
	3492	then
	3493	if [[ -f CONTINUE_RUN ]]
	3494	then
	3495	echo "PALM restart run necessary" > email_text
	3496	echo "description header of actual run:" >> email_text
	3497	cat CONTINUE_RUN >> email_text
	3498	echo "mrun-command to restart:" >> email_text
	3499	echo "$mc" >> email_text
	3500	else
	3501	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	3502	fi
	3503	mail $email_notification < email_text
	3504	printf "\n *** email notification sent to \"$email_notification\" "
	3505	fi
	3506	fi
	3507
	3508
	3509
	3510	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	3511	cd $HOME
	3512	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	3513
	3514	else
	3515
	3516
	3517	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	3518	# CHENDE AKTIONEN DURCHGEFUEHRT
	3519
	3520	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	3521	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	3522	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	3523	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[1]	3524	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	3525	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	3526	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	3527	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	3528	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	3529	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	3530	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	3531	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	3532	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	3533	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	3534	if [[ $use_openmp = true ]]
	3535	then
	3536	mrun_com=${mrun_com}" -O"
	3537	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	3538	else
	3539	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	3540	fi
	3541	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	3542	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	3543	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	3544	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
	3545	[[ $node_usage != default ]] && mrun_com=${mrun_com}" -n $node_usage"
	3546	if [[ $do_remote = true ]]
	3547	then
	3548	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	3549	fi
	3550
	3551
	3552	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	3553	jobfile=jobfile.$RANDOM
	3554
	3555
	3556	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	3557	echo "mkdir $TEMPDIR" >> $jobfile
	3558	echo "cd $TEMPDIR" >> $jobfile
	3559
	3560
	3561	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	3562	if [[ $do_trace = true ]]
	3563	then
	3564	echo "set -x" >> $jobfile
	3565	else
	3566	echo "set +vx" >> $jobfile
	3567	fi
	3568
	3569
	3570	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	3571	# SOWIE GEGEBENENFALLS DES MAKEFILES
	3572	if [[ $do_compile = true ]]
	3573	then
	3574
	3575	source_catalog=SOURCES_FOR_RUN_$fname
	3576
	3577	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	3578	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	3579	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	3580	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	3581	echo "export SOURCES_COMPLETE=true" >> $jobfile
	3582	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	3583
	3584	for filename in $source_list
	3585	do
	3586	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3587	echo "cat > $filename << \"%END%\"" >> $jobfile
	3588	cat $source_catalog/$filename >> $jobfile
	3589	echo " " >> $jobfile
	3590	echo "%END%" >> $jobfile
	3591	echo " " >> $jobfile
	3592	done
	3593
[82]	3594	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3595	echo "cat > Makefile << \"%END%\"" >> $jobfile
	3596	cat $source_catalog/Makefile >> $jobfile
	3597	echo " " >> $jobfile
	3598	echo "%END%" >> $jobfile
	3599	echo " " >> $jobfile
[1]	3600
	3601	echo "cd - > /dev/null" >> $jobfile
	3602
	3603	fi
	3604
	3605
	3606	# ABSPEICHERN DER KONFIGURATIONSDATEI
	3607	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3608	echo "cat > $config_file << \"%END%\"" >> $jobfile
	3609	cat $config_file >> $jobfile
	3610	echo "%END%" >> $jobfile
	3611	echo " " >> $jobfile
	3612
	3613
	3614	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	3615	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3616	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
[22]	3617	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
[1]	3618	echo "%END%" >> $jobfile
	3619	if [[ $host = lctit ]]
	3620	then
	3621	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	3622	echo "mv mrun_new $mrun_script_name" >> $jobfile
	3623	fi
	3624	echo "chmod u+x $mrun_script_name" >> $jobfile
	3625	echo "execute_mrun=true" >> $jobfile
	3626	echo " " >> $jobfile
	3627
	3628	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	3629	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	3630	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	3631	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	3632	if [[ $do_remote = true ]]
	3633	then
	3634	(( i = 0 ))
	3635	while (( i < iin ))
	3636	do
	3637	(( i = i + 1 ))
	3638	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	3639	if [[ "${transin[$i]}" = job ]]
	3640	then
	3641	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	3642	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	3643	echo " " >> $jobfile
	3644	echo "%END%" >> $jobfile
	3645	else
[82]	3646	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	3647	fi
	3648
	3649	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	3650	echo "if [[ \$? = 1 ]]" >> $jobfile
	3651	echo "then" >> $jobfile
	3652	echo " echo \" \" " >> $jobfile
	3653	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	3654	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	3655	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	3656	echo " execute_mrun=false" >> $jobfile
	3657	echo "fi" >> $jobfile
	3658	done
	3659	fi
	3660
	3661	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	3662	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	3663	echo "LOCAL_PWD=$working_directory" >> $jobfile
	3664	echo "export LOCAL_PWD" >> $jobfile
	3665
	3666	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	3667	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	3668	echo "export LOCAL_MRUN_PATH" >> $jobfile
	3669
[66]	3670	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	3671	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	3672	then
	3673	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	3674	fi
[1]	3675
	3676	# MRUN AUF ZIELRECHNER AUFRUFEN
	3677	echo "set -x" >> $jobfile
	3678	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	3679
	3680	echo 'ls -al; echo `pwd`' >> $jobfile
	3681	echo "cd \$HOME" >> $jobfile
	3682	echo "rm -rf $TEMPDIR" >> $jobfile
	3683
	3684
	3685
	3686
	3687	# JOB PER SUBJOB STARTEN
	3688	if [[ $silent = false ]]
	3689	then
	3690	printf "\n "
	3691	else
	3692	printf "\n\n"
	3693	fi
	3694
[82]	3695	subjob $job_on_file -h $host -u $remote_username -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v $jobfile
[1]	3696	rm -rf $jobfile
	3697
	3698
	3699	fi # ENDE REMOTE-TEIL
	3700
	3701
	3702
	3703	# ENDE DER PROZEDUR

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source: palm/trunk/SCRIPTS/mrun @ 99

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