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source: palm/trunk/SCRIPTS/mrun @ 169

Last change on this file since 169 was 169, checked in by raasch, 17 years ago
property settings for scripts changed
Property svn:keywords set to `Id`
File size: 143.2 KB

Rev	Line
[71]	1	#!/bin/ksh
[66]	2	# mrun - Plot-Shellskript
[169]	3	# $Id: mrun 169 2008-05-21 13:33:33Z raasch $
[1]	4
	5	# Prozedur zum Starten von Modellaeufen
	6
	7	# letzte Aenderung:
	8	# 03/03/94 - Siggi - Entwicklungsbeginn
	9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	11	# zelne Variable exportiert. Dies ist noetig, weil an-
	12	# sonsten irgendein Speicher ueberlaeuft und von mrun
	13	# aufgerufene Programme (z.B. stageout) mit Fehlern
	14	# abbrechen (too many arguments)
	15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	16	# defaultmaessig im RRZN-Profile eingeschaltet
	17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	18	# wegfallen
	19	# 25/04/00 - Siggi - Version 1.5
	20	# remote_addres und remote_user in return_addres bzw.
	21	# return_username umbenannt, return_username wird dem
	22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	23	# Neue Variable remote_username, die beim interaktiven
	24	# mrun-Aufruf zwingend ueber die neue Option -u oder
	25	# in der Konfigurationsdatei angegeben werden muss.
	26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	27	# Version 1.7
	28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	31	# zu bestimmen; Praeprozessoroptionen haben nun alle
	32	# die Form -Dtext=text, weil auf IBM sonst text durch
	33	# die leere Zeichenkette ersetzt wird
	34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	36	# (-D$OMP=OMP) in order to avoid problems with
	37	# OMP_NUM_THREADS
	38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	39	# tar files, one for each node used
	40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	42	# 17/01/05 - Siggi - job for data transfer to local machine now within
	43	# job class c1 (HLRN)
	44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	46	# base filename and cycle number
	47	# 16/02/05 - Gerald - hababai validated
	48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	49	# 29/03/05 - Marcus - berni*-en0 validated
	50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	51	# 24/04/05 - Siggi - netcdf support on lcmuk
	52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	54	# number) can now be used within interactive runs
	55	# 12/05/05 - Siggi - netcdf support on ibm
	56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	57	# 18/05/05 - Siggi - netcdf support on nec
	58	# 24/05/05 - Siggi - netcdf support on ibms
	59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	60	# to 30 seconds
	61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	62	# PATH is temporarily set)
	63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	64	# caused warnings in the job protocol
	65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	67	# removed
	68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	69	# realized by file attribute trpe
	70	# 28/10/05 - Siggi - if existing, the file extension is output in case
	71	# of missing input file - no job abort in case of
	72	# missing input files with file extensions
	73	# (preliminary solution)
	74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	76	# 07/12/05 - Siggi - gallego and elephanta admitted
	77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	79	# 20/01/06 - Siggi - cpp directive for ibmy
	80	# 09/02/06 - Siggi - ibmy admitted for batch mode
	81	# 13/04/06 - Siggi - ostria admitted
	82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	84	# optimization of OpenMP runs (option stacksize is
	85	# necessary for large gridpoint numbers because
	86	# otherwise a segmentation fault occurs)
	87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	90	# 20/09/06 - Marcus - add DVRP library on nech
	91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	92	# on local NAMELIST file ENVPAR
	93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	95	# 06/02/07 - Siggi - add DVRP library on lcmuk
	96	# 07/02/07 - Siggi - revision of source code handling, source code is
	97	# now expected in directory given by source_path and
	98	# not in the current working directory, source code
	99	# files provided in add_source_path are allways
	100	# compiled, source code to be compiled is allways
	101	# sampled in SOURCES_FOR_RUN_$fname which is a
	102	# subdirectory of the current working directory,
[5]	103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	104	# adapted for RIAM (neck)
[5]	105	# bugfix for cycle number of output file (extout)
	106	# all hpmuk-related code removed
[14]	107	# 14/02/07 - Siggi - dvrp support for neck added
[21]	108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	109	# mrun_path replaced by PALM_BIN,
	110	# all machines are calling interpret_config.x
[66]	111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	112	# output
[69]	113	# 16/03/07 - Siggi - adjustments for lctit
[78]	114	# 29/03/07 - Siggi - global revision transfered to batch job by new
	115	# option -G
[82]	116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	117	# + netcdf/dvrp-options are read from configuration
	118	# file, host identifier (local_host) is read from
	119	# config file, code related to ftp filetransfer
	120	# removed (incl. option -f)
[97]	121	# 19/06/07 - Siggi - time limit for cdata jobs increased
[102]	122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
	123	# if new option -Y (coupling) is given,
	124	# output of executables to aout_output removed,
	125	# messages are immediately written to stdout instead
[108]	126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
	127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
	128	# variables out to the nodes in coupled mode -disabled-
	129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
[109]	130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
	131	# environment variables out to the nodes in coupled mode
[118]	132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
	133	# suggestions
[122]	134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
	135	# argument -g group_number, admit all sla* node_usage
	136	# queues
[129]	137	# 30/10/07 - Marcus - further adjustments for queues on lctit
[149]	138	# 14/02/08 - Bjoern - link of restart files with long file name possible
	139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
	140	# true, mrun tries "ln -f" on local output and resorts
	141	# to "cp" or "cp -r" on error
[164]	142	# 15/04/08 - Siggi - argument -c introduced to most of the subjob calls,
	143	# which allows the user to choose his own job catalog
	144	# by setting job_catalog in the configuration file
	145	# (default is ~/job_queue),
	146	# workaround for mpixec with -env option,
	147	# adjustments for lcxt4 (Bergen Center for Computational
	148	# Science)
[1]	149
	150	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	151
	152	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	153	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	154	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	155
	156	AddFilenames=""
	157	additional_conditions=""
	158	add_source_path=""
	159	afname=""
	160	archive_save=true
	161	archive_system=none
	162	compiler_name=""
	163	cond1=""
	164	cond2=""
	165	config_file=.mrun.config
	166	cpp_opts=""
[82]	167	cpp_options=""
[1]	168	cpumax=0
	169	cpurest=0
	170	delete_temporary_catalog=true
	171	do_batch=false
	172	do_compile=true
	173	do_remote=false
	174	do_stagein=true
	175	do_stageout=true
	176	do_trace=false
	177	email_notification=""
	178	exclude=""
	179	executable=""
	180	execution_error=false
[67]	181	fimm=false
[1]	182	fname=test
	183	fromhost=""
[78]	184	global_revision=""
[122]	185	group_number=none
[1]	186	host=""
	187	host_file=""
	188	hp=""
	189	ignore_archive_error=false
	190	input_list=""
	191	interpreted_config_file=""
[164]	192	job_catalog="~/job_queue"
[1]	193	job_on_file=""
	194	keep_data_from_previous_run=false
[149]	195	link_local_output=false
[1]	196	localhost_realname=$(hostname)
	197	local_compile=false
	198	locat=normal
	199	mainprog=""
	200	makefile=""
	201	mc=$0
	202	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	203	do
	204	mc=`echo $mc \| cut -f2- -d"/"`
	205	done
	206	module_files=""
	207	mrun_script_name=$mc
[82]	208	netcdf_inc=""
	209	netcdf_lib=""
[1]	210	netcdf_support=false
	211	node_usage=default
	212	numprocs=""
	213	OOPT=""
	214	openmp=false
	215	output_list=""
	216	package_list=""
	217	punkte="..........................................................."
	218	queue=none
	219	read_from_config=""
[5]	220	restart_run=false
[146]	221	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	222	if [[ $return_addres = 130.75.105.158 ]]
	223	then
	224	return_addres=172.20.25.41
	225	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	226	fi
	227	# if [[ $return_addres = 210.117.65.1 ]]
	228	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
	229	# then
	230	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
	231	# fi
	232	return_password=""
	233	return_username=$LOGNAME
	234	remotecall=false
	235	remote_username=""
[102]	236	run_coupled_model=false
[1]	237	run_mode=""
	238	scirocco=false
	239	store_on_archive_system=true
	240	striche=" ----------------------------------------------------------------------------"
	241	silent=false
	242	source_list=""
	243	source_path=SOURCE
	244	tasks_per_node=""
	245	threads_per_task=1
	246	tmpcreate=false
	247	tmp_data_catalog=""
	248	transfer_problems=false
	249	usern=$LOGNAME
	250	working_directory=`pwd`
	251	TOPT=""
	252	XOPT=""
	253	zeit=$( date \| cut -c 12-19 )
	254
	255	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
[102]	256	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
[1]	257
[66]	258	typeset -R30 calltime
[1]	259	typeset -L20 spalte1
	260	typeset -L40 spalte2
	261	typeset -L60 spalte3
	262	typeset -L35 string1=`date`
	263	typeset -L12 string2=$usern
	264	typeset -L12 string3=$localhost_realname
	265	typeset -L12 string4
	266	typeset -L12 string5
[169]	267	typeset -L30 version="MRUN 2.0 Rev$Rev: 164 $"
[1]	268
	269
	270
	271	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	272	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	273
	274	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	275	# EXPORTIERT WERDEN
	276	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
[127]	277	export group_number input_list memory numprocs output_list queue run_mode
[1]	278
	279
	280
	281	# FEHLERBEHANDLUNG
	282	# BEI EXIT:
[83]	283	trap 'rm -rf $working_directory/tmp_mrun
[69]	284	if [[ $locat != localhost ]]
[1]	285	then
[22]	286	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	287	# then
	288	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	289	#MRUN-calls on $localhost
	290	#
	291	#date and time user localhost remotehost termination mrun-command
	292	#--------------------------------------------------------------------------------------------------------------------
	293	#%STATEND%
	294	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	295	# fi
	296	#
	297	# # EINTRAG IN DIE STATISTIK-DATEI
	298	# string4=$host
	299	# string5=$locat
	300	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	301	# then
	302	# if [[ $do_batch = true ]]
	303	# then
	304	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	305	# else
	306	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	307	# fi
	308	# fi
[69]	309	echo " " > /dev/null
[1]	310	fi
	311
	312	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	313	then
	314
	315	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	316	(( i = 0 ))
	317	while (( i < iec ))
	318	do
	319	(( i = i + 1 ))
	320	printf "\n *** Execution of ERROR-command:\n"
	321	printf " >>> ${err_command[$i]}\n"
	322	eval ${err_command[$i]}
	323	done
	324	if [[ -n $interpreted_config_file ]] then
	325	rm -rf $interpreted_config_file
	326	fi
[71]	327	if [[ -n .mrun_environment ]] then
	328	rm -rf .mrun_environment
	329	fi
[1]	330	if [[ $tmpcreate = true ]]
	331	then
	332	printf "\n *** Contents of \"$TEMPDIR\":\n"
	333	ls -al; cd
	334	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	335	fi
	336	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	337	then
	338	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	339	fi
	340	printf "\n\n+++ MRUN killed \n\n"
	341	elif [[ $locat != control_c ]]
	342	then
	343	printf "\n\n --> all actions finished\n\n"
	344	printf " Bye, bye $usern !!\n\n"
	345	fi' exit
	346
	347
	348	# BEI TERMINAL-BREAK:
[83]	349	trap 'rm -rf $working_directory/tmp_mrun
[69]	350	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	351	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	352	then
	353	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	354	fi
	355	printf "\n+++ MRUN killed by \"^C\" \n\n"
	356	locat=control_c
	357	exit
	358	' 2
	359
	360
[22]	361	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	362	# BEEN SET
	363	if [[ "$PALM_BIN" = "" ]]
	364	then
	365	printf "\n +++ environment variable PALM_BIN has not been set"
	366	printf "\n please set it to the directory where the PALM scripts are located"
	367	locat=palm_bin; exit
	368	fi
	369
	370
[1]	371
	372	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	373	# FUER FOLGEJOBS BENOETIGT WIRD
[122]	374	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
[1]	375	do
	376	case $option in
	377	(a) afname=$OPTARG;;
	378	(A) store_on_archive_system=false; mc="$mc -A";;
	379	(b) do_batch=true; mc="$mc -b";;
	380	(B) delete_temporary_catalog=false; mc="$mc -B";;
	381	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	382	(C) restart_run=true; mc="$mc -C";;
[1]	383	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
	384	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
[79]	385	(F) job_on_file="-D"; mc="$mc -F";;
[122]	386	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
[78]	387	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	388	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	389	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	390	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	391	(I) ignore_archive_error=true; mc="$mc -I";;
	392	(k) keep_data_from_previous_run=true; mc="$mc -k";;
	393	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
	394	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	395	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	396	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	397	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	398	(O) use_openmp=true; mc="$mc -O";;
	399	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	400	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	401	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	402	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	403	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	404	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	405	(S) read_from_config=false; mc="$mc -S";;
	406	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	407	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	408	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	409	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	410	(v) silent=true; mc="$mc -v";;
	411	(x) do_trace=true;set -x; mc="$mc -x";;
	412	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
[102]	413	(Y) run_coupled_model=true; mc="$mc -Y";;
[1]	414	(\?) printf "\n +++ unknown option $OPTARG \n"
	415	printf "\n --> type \"$0 ?\" for available options \n"
	416	locat=parameter;exit;;
	417	esac
	418	done
	419
	420
	421	# EVTL. POSITIONSPARAMETER EINLESEN
	422	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	423	shift OPTIND-1
	424
	425
	426	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	427	if [[ "$1" = "?" ]]
	428	then
	429	(printf "\n *** mrun can be called as follows:\n"
	430	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
	431	printf "\n Description of available options:\n"
	432	printf "\n Option Description Default-Value"
	433	printf "\n -a base name of input files equiv. -d"
	434	printf "\n -A no archiving when using file-attribute fl"
	435	printf "\n -b batch-job on local machine ---"
	436	printf "\n -B do not delete temporary directory at end ---"
	437	printf "\n -c configuration file .mrun.config"
	438	printf "\n -d base name of files attached to program test"
	439	printf "\n -D preprocessor(cpp)-directives \"\" "
	440	printf "\n -F create remote job file only ---"
	441	printf "\n -h execution host $localhost_realname"
	442	printf "\n -i INPUT control list \"\" "
	443	printf "\n -I archiving errors of previous batch-jobs"
	444	printf "\n will be ignored"
	445	printf "\n -k keep data from previous run"
	446	printf "\n -K additional conditions for controling"
	447	printf "\n usage of conditional code and"
	448	printf "\n env-variables in configuration file \"\" "
	449	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	450	printf "\n -M Makefile name Makefile"
	451	printf "\n -n node usage (shared/not_shared) depending on -h"
	452	printf "\n -o OUTPUT control list \"\" "
	453	printf "\n -O use OpenMP ---"
	454	printf "\n -p software package list \"\" "
	455	printf "\n -q queue \"$queue\" "
	456	printf "\n -r run control list (combines -i -o) \"\" "
	457	printf "\n -s filenames of routines to be compiled \"\" "
	458	printf "\n must end with .f, .f90, .F, or .c !"
	459	printf "\n use \"..\" for more than one file and wildcards"
	460	printf "\n -s TEST compiles all files with w-permit"
	461	printf "\n -S config file interpreted by shellscript ---"
	462	printf "\n -t allowed cpu-time in seconds (batch) 0"
	463	printf "\n -T tasks per node depending on -h"
	464	printf "\n -u username on remote machine \"\" "
	465	printf "\n -v no prompt for confirmation ---"
	466	printf "\n -x tracing of mrun for debug purposes ---"
	467	printf "\n -X # of processors (on parallel machines) 1"
[102]	468	printf "\n -Y run coupled model ---"
[1]	469	printf "\n "
	470	printf "\n Possible values of positional parameter <modus>:"
	471	printf "\n \"?\" - this outline \n\n") \| more
	472	exit
	473	elif [[ "$1" != "" ]]
	474	then
	475	printf "\n +++ positional parameter $1 unknown \n"
	476	locat=parameter; exit
	477	fi
	478
	479
	480
	481	# KURZE STARTMELDUNG
	482	printf "\n*** $version "
	483	printf "\n will be executed. Please wait ..."
	484
	485
[82]	486
	487	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	488	if [[ ! -f $config_file ]]
	489	then
	490	printf "\n\n +++ configuration file: "
	491	printf "\n $config_file"
	492	printf "\n does not exist"
	493	locat=connect; exit
	494	fi
	495
	496
	497	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	498	line=""
	499	grep "%host_identifier" $config_file > tmp_mrun
	500	while read line
	501	do
	502	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
	503	then
	504	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	505	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	506	if [[ $localhost_realname = $HOSTNAME ]]
[82]	507	then
	508	localhost=$host_identifier
	509	break
	510	fi
	511	fi
	512	done < tmp_mrun
	513
	514	if [[ "$localhost" = "" ]]
	515	then
	516	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	517	printf "\n for local host \"$localhost_realname\"."
	518	printf "\n Please add line"
	519	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	520	printf "\n to the configuration file."
	521	locat=localhost; exit
	522	fi
	523
	524
	525
	526	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	527	case $localhost_realname in
	528	(breg-en0\|berni-en0) archive_system=tivoli;;
	529	(cs*) archive_system=ut;;
	530	(fimm.bccs.uib.no) fimm=true;;
	531	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	532	(hreg-en0\|hanni-en0) archive_system=tivoli;;
	533	(scirocco) scirocco=true;;
	534	esac
	535
	536
	537
[1]	538	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	539	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	540	[[ "$afname" = "" ]] && afname=$fname
	541
	542
	543	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	544	if [[ "$run_mode" != "" ]]
	545	then
	546	input_list="$input_list $run_mode"
	547	output_list="$output_list $run_mode"
	548	fi
	549
	550
	551	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	552	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	553	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	554	# STARTET)
	555	if [[ "$fromhost" = "" ]]
	556	then
	557	fromhost=$localhost
	558	fi
	559
	560
	561	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	562	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	563	then
	564	source_list=TEST
	565	local_compile=true
	566	host=$localhost
	567	fi
	568
	569
	570	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	571	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	572	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	573	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	574	if [[ -n $host && "$host" != $localhost ]]
	575	then
	576	do_batch=true
	577	do_remote=true
	578	case $host in
[5]	579	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
[1]	580	(*) printf "\n"
[83]	581	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	582	printf "\n is not available"
[1]	583	locat=nqs; (( iec = 0 )); exit;;
	584	esac
	585	else
	586	host=$localhost
	587	fi
	588
	589
	590	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	591	if [[ -n $additional_conditions ]]
	592	then
[69]	593	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	594	cond1=`echo $additional_conditions \| cut -d" " -f1`
	595	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	596	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	597	if [[ -n $dummy ]]
	598	then
	599	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	600	locat=options; exit
	601	fi
	602	fi
	603
	604
	605	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	606	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	607	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	608	then
	609	if [[ $ignore_archive_error = false ]]
	610	then
	611	printf "\n +++ data archiving of previous run failed"
	612	printf "\n see directory \~/job_queue on remote machine"
	613	locat=archive; exit
	614	else
	615	printf "\n +++ warning: data archiving in a previous run failed"
	616	printf "\n MRUN continues, trying to get backup copy"
	617	fi
	618	fi
	619
	620
	621
	622	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	623	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	624	if [[ "$read_from_config" = false ]]
	625	then
	626
	627	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	628	while read zeile
	629	do
	630	[[ $silent = false ]] && printf "."
	631
	632
	633	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	634	# ERSETZEN
	635	eval zeile=\"$zeile\"
	636
	637
	638	# INTERPRETATION DER ZEILE
[21]	639	if [[ "$(echo $zeile)" = "" ]]
[1]	640	then
[21]	641	# LEERZEILE, KEINE AKTION
	642	continue
[1]	643
[21]	644	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	645	then
	646
[1]	647	# ZEILE IST KOMMENTARZEILE
	648	true
	649
	650	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	651	then
	652
	653	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	654	zeile=$(echo $zeile \| cut -c2-)
[69]	655	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	656	var=`echo $zeile \| cut -d" " -f1`
	657	value=`echo $zeile \| cut -d" " -s -f2`
	658	for_host=`echo $zeile \| cut -d" " -s -f3`
	659	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	660	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	661
	662	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	663	then
	664
	665	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	666	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	667	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	668
	669
	670	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	671	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	672	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	673	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	674	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	675	# KONFIGURATIONSDATEI
	676	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	677	then
	678	eval $var=\$value
	679
	680	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	681	if [[ $do_trace = true ]]
	682	then
	683	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	684	fi
	685	fi
	686
	687	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	688	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	689	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	690	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	691	if [[ $var = host ]]
	692	then
	693	if [[ -n $host && "$host" != $localhost ]]
	694	then
	695	do_batch=true
	696	do_remote=true
	697	case $host in
	698	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
[83]	699	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	700	printf "\n is not available"
[1]	701	locat=nqs; exit;;
	702	esac
	703	else
	704	host=$localhost
	705	fi
	706	fi
	707
	708	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	709	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	710	# DEN PROGRAMMEN BENOETIGT WERDEN
	711	export $var
	712	fi
	713
	714
	715
	716
	717	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	718	then
	719
	720	# ZEILE DEFINIERT ERROR-KOMMANDO
	721	(( iec = iec + 1 ))
	722	zeile=$(echo $zeile \| cut -c4-)
	723	err_command[$iec]="$zeile"
	724
	725	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	726	then
	727
	728	# ZEILE DEFINIERT INPUT-KOMMANDO
	729	(( iic = iic + 1 ))
	730	zeile=$(echo $zeile \| cut -c4-)
	731	in_command[$iic]="$zeile"
	732
	733	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	734	then
	735
	736	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	737	(( ioc = ioc + 1 ))
	738	zeile=$(echo $zeile \| cut -c4-)
	739	out_command[$ioc]="$zeile"
	740
	741	else
	742
	743	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	744	# s2a: in/out - Feld
	745	# s2b: loc - Feld (optional)
	746	# s2c: tr/ar - Feld (optional)
[69]	747	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	748	s1=`echo $zeile \| cut -d" " -f1`
	749	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	750	s2a=$(echo $s2 \| cut -d":" -f1)
	751	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	752	then
	753	s2b=""
	754	s2c=""
	755	else
[69]	756	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	757	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	758	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	759	fi
[69]	760	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	761	s3=`echo $zeile \| cut -d" " -f3`
	762	s4=`echo $zeile \| cut -d" " -s -f4`
	763	s5=`echo $zeile \| cut -d" " -s -f5`
	764	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	765
	766
	767	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	768	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	769	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	770	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	771	# HANDEN SEIN MUSS (D.H. s2b = loc)
	772	IFSALT="$IFS"; IFS="$IFS:"
	773	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	774	then
	775	found=false
	776	for actual in $input_list
	777	do
	778	for formal in $s3
	779	do
	780	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	781	done
	782	done
	783	if [[ $found = true ]]
	784	then
	785	(( iin = iin + 1 ))
	786	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	787	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	788	extin[$iin]=$s6
	789	fi
	790	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	791	then
	792	found=false
	793	for actual in $output_list
	794	do
	795	for formal in $s3
	796	do
	797	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	798	done
	799	done
	800	if [[ $found = true ]]
	801	then
	802	(( iout = iout + 1 ))
	803	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	804	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	805	fi
	806	elif [[ "$s2a" != in && "$s2a" != out ]]
	807	then
	808	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	809	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	810	locat=connect; exit
	811	fi
	812	IFS="$IFSALT"
	813	fi
	814	done < $config_file
	815
	816	else
	817
	818
	819	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	820	[[ $silent = false ]] && printf "..."
	821	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	822	export interpreted_config_file=.icf.$RANDOM
	823
	824
[69]	825
	826	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	827	# VERFUEGUNG STELLEN
	828	cat > .mrun_environment << %%END%%
	829	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	830	config_file = '$config_file', do_remote = '$do_remote',
	831	do_trace = '$do_trace', host = '$host',
	832	input_list = '$input_list', icf = '$interpreted_config_file',
	833	localhost = '$localhost', output_list = '$output_list' /
	834
	835	%%END%%
	836
	837	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	838	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	839	mrun_memory=$memory
[127]	840	mrun_group_number=$group_number
[69]	841	mrun_cpumax=$cpumax
	842	mrun_numprocs=$numprocs
	843
[66]	844	if [[ $localhost_realname = "gate" ]]
	845	then
	846	interpret_config_gate.x
	847	else
	848	interpret_config.x
	849	fi
[71]	850	rm .mrun_environment
[1]	851
[71]	852
[1]	853	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	854	chmod u+x $interpreted_config_file
	855	export PATH=$PATH:.
	856	. $interpreted_config_file
[71]	857	rm $interpreted_config_file
[1]	858
[71]	859
[69]	860	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	861	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
[127]	862	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
[71]	863	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	864	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	865
[1]	866	fi
	867
	868
	869	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	870	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	871	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	872	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	873	if [[ "$SOURCES_COMPLETE" = "" ]]
	874	then
	875
	876	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	877	# VEREINBART WURDE
	878	source_path=""
	879	line=""
	880	grep "%source_path" $config_file > tmp_mrun
	881	while read line
	882	do
	883	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	884	then
	885	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	886	then
	887	global_source_path=`echo $line \| cut -d" " -f2`
	888	fi
	889	fi
	890	done < tmp_mrun
	891
	892	line=""
	893	found=false
	894	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	895	while read line
	896	do
	897	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	898	then
	899	if [[ $found = true ]]
	900	then
	901	printf "\n\n +++ more than one source path found in configuration file"
	902	printf "\n for local host \"$localhost\" "
	903	locat=source_path; exit
	904	fi
	905	source_path=`echo $line \| cut -d" " -f2`
	906	found=true
	907	fi
	908	done < tmp_mrun
	909	rm tmp_mrun
	910
	911	if [[ "$source_path" = "" ]]
	912	then
	913	if [[ "$global_source_path" != "" ]]
	914	then
	915	source_path=$global_source_path
	916	else
	917	printf "\n\n +++ no source path found in configuration file"
	918	printf "\n for local host \"$localhost\" "
	919	locat=source_path; exit
	920	fi
	921	fi
	922	eval source_path=$source_path
	923
	924	if [[ ! -d $source_path ]]
	925	then
	926	printf "\n\n +++ source path \"$source_path\" on local host"
	927	printf "\n \"$localhost\" does not exist"
	928	locat=source_path; exit
	929	fi
	930
	931	fi
	932
	933
[78]	934	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	935	# DURCH OPTION -G MITGETEILT)
	936	if [[ "$global_revision" = "" ]]
	937	then
	938	global_revision=`svnversion $source_path 2>/dev/null`
	939	global_revision="Rev: $global_revision"
	940	fi
[1]	941
[78]	942
[1]	943	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	944	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	945	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	946	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	947	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	948	if [[ -n $host && "$host" != $localhost ]]
	949	then
	950	do_batch=true
	951	do_remote=true
	952	case $host in
[5]	953	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
[1]	954	(*) printf "\n"
[83]	955	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	956	printf "\n is not available"
[1]	957	locat=nqs; (( iec = 0 )); exit;;
	958	esac
	959	else
	960	host=$localhost
	961	fi
	962
	963
	964	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	965	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	966	then
	967
	968	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	969	if [[ ! -n $numprocs ]]
	970	then
	971	printf "\n"
	972	printf "\n +++ option \"-K parallel\" requires additional specification"
	973	printf "\n of the number of processors to be used by"
	974	printf "\n mrun-option \"-X\" or by environment-variable"
	975	printf "\n \"numprocs\" in the configuration file"
	976	locat=numprocs; (( iec = 0 )); exit
	977	fi
	978
	979	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	980	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	981	# GESAMTPROZESSORANZAHL IST
	982	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
	983	then
	984	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	985	(( ival = $tasks_per_node ))
	986	(( pes = numprocs ))
	987	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	988	# then
	989	# (( pes = pes - 1 ))
	990	# fi
	991	(( ii = pes / ival ))
	992	if (( pes - ii * ival > 0 ))
	993	then
	994	printf "\n"
	995	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	996	printf "\n divisor of the total number of processors (option \"-X\")"
	997	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	998	locat=tasks_per_node; (( iec = 0 )); exit
	999	fi
	1000	fi
	1001
	1002	# IBMY HAT NUR EINEN KNOTEN
	1003	if [[ $host = ibmy ]]
	1004	then
	1005	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	1006	then
	1007	printf "\n"
	1008	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	1009	printf "\n total number of processors (option \"-X\")"
	1010	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1011	locat=tasks_per_node; (( iec = 0 )); exit
	1012	fi
	1013	fi
	1014
	1015	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	1016	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	1017	if [[ $use_openmp = true ]]
	1018	then
	1019	threads_per_task=$tasks_per_node
	1020	tasks_per_node=1
	1021	fi
	1022	OOPT="-O $threads_per_task"
	1023	TOPT="-T $tasks_per_node"
	1024
	1025	# GESAMTZAHL DER KNOTEN BESTIMMEN
	1026	if [[ "$tasks_per_node" != "" ]]
	1027	then
	1028	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	1029	fi
	1030
	1031	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	1032	# SETZEN
	1033	if [[ $node_usage = default ]]
	1034	then
	1035	if [[ $host = ibms ]]
	1036	then
	1037	node_usage=shared
[118]	1038	elif [[ $host = lctit ]]
	1039	then
[129]	1040	node_usage=sla3
[1]	1041	else
	1042	node_usage=not_shared
	1043	fi
	1044	fi
[126]	1045	if [[ $node_usage != shared && $node_usage != not_shared && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
[1]	1046	then
	1047	printf "\n"
	1048	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1049	printf "\n \"shared\" or \"not_shared\""
	1050	locat=tasks_per_node; (( iec = 0 )); exit
	1051	fi
	1052
	1053	fi
	1054
	1055	# PRUEFEN, OB HOSTFILE EXISTIERT
	1056	if [[ -n $hostfile ]]
	1057	then
	1058	if [[ ! -f $hostfile ]]
	1059	then
	1060	printf "\n"
	1061	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1062	locat=hostfile; exit
	1063	fi
	1064	fi
	1065
	1066	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1067	if [[ $host = ibmy && $do_remote = false ]]
	1068	then
	1069	if [[ ! -f $HOME/.rhosts ]]
	1070	then
	1071	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1072	printf "\n\n *** file:"
	1073	printf "\n $HOME/.rhosts"
	1074	printf "\n was created\n"
	1075	fi
	1076	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1077	then
	1078	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1079	printf "\n\n *** file:"
	1080	printf "\n $HOME/.rhosts"
	1081	printf "\n was extended by the name of the current host\n"
	1082	fi
	1083	fi
	1084
	1085
	1086
	1087	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1088	if [[ $queue = none ]]
	1089	then
	1090	case $host in
	1091	(ibmb) if [[ $node_usage = shared ]]
	1092	then
	1093	queue=cshare
	1094	else
	1095	queue=csolo
	1096	fi;;
	1097	(ibmh) if [[ $node_usage = shared ]]
	1098	then
	1099	queue=cshare
	1100	else
	1101	queue=csolo
	1102	fi;;
	1103	(ibmy) queue=parallel;;
[129]	1104	(lctit) queue=sla3;;
[1]	1105	(nech) queue=none;;
	1106	(neck) queue=P;;
	1107	(unics) queue=unics;;
	1108	esac
	1109	fi
	1110
	1111
	1112	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1113	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1114	# ERMITTELN
	1115	(( i = 0 ))
	1116	while (( i < iin ))
	1117	do
	1118	(( i = i + 1 ))
	1119	(( maxcycle = 0 ))
	1120
	1121	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1122	if [[ "${actionin[$i]}" = di ]]
	1123	then
	1124	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1125	# REM-MASCHINE AUSWERTEN
	1126	eval filename=${pathin[$i]}/${endin[$i]}
	1127	else
	1128	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1129	# REM-MASCHINE AUSWERTEN
	1130	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1131	fi
	1132
	1133	# PRUEFEN AUF VORHANDENSEIN
	1134	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1135	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1136	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1137	then
	1138	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1139	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1140	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1141	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1142	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1143	if [[ "${transin[$i]}" != "locopt" ]]
	1144	then
	1145	printf "\n\n +++ INPUT-file: "
	1146	if [[ "${extin[$i]}" = "" ]]
	1147	then
	1148	printf "\n $filename"
	1149	else
	1150	printf "\n $filename.${extin[$i]}"
	1151	fi
	1152	printf "\n does not exist\n"
	1153	locat=input; exit
	1154	else
	1155	transin[$i]="unavailable"
	1156	fi
	1157	else
	1158
	1159	# ZYKLUSNUMMER FESTSTELLEN
	1160	ls -1 -d $filename > filelist 2>/dev/null
	1161	ls -1 -d $filename.* >> filelist 2>/dev/null
	1162	while read zeile
	1163	do
	1164	cycle=$(print $zeile \| cut -f2 -d".")
	1165	if [[ "$cycle" = "$zeile" ]]
	1166	then
	1167	(( icycle = 0 ))
	1168	elif [[ "$cycle" = "${extin[$i]}" ]]
	1169	then
	1170	(( icycle = 0 ))
	1171	else
	1172	(( icycle = $cycle ))
	1173	fi
	1174	if (( icycle > maxcycle ))
	1175	then
	1176	(( maxcycle = icycle ))
	1177	file_to_be_used=$zeile
	1178	fi
	1179	done <filelist
	1180	rm filelist
	1181
	1182	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1183	if (( maxcycle > 0 ))
	1184	then
	1185	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1186	then
	1187	filename=${filename}.$maxcycle.${extin[$i]}
	1188	else
	1189	filename=${filename}.$maxcycle
	1190	fi
	1191	else
	1192	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1193	then
	1194	filename=${filename}.${extin[$i]}
	1195	fi
	1196	fi
	1197
	1198	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1199	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1200	absnamein[$i]=$filename
	1201	if (( maxcycle > 0 ))
	1202	then
	1203	if [[ "${actionin[$i]}" = di ]]
	1204	then
	1205	frelin[$i]=${endin[$i]}.$maxcycle
	1206	else
	1207	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1208	fi
	1209	else
	1210	if [[ "${actionin[$i]}" = di ]]
	1211	then
	1212	frelin[$i]=${endin[$i]}
	1213	else
	1214	frelin[$i]=${afname}${endin[$i]}
	1215	fi
	1216	fi
	1217
	1218	fi
	1219	done
	1220
	1221
	1222	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1223	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1224	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1225	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1226	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1227	(( i = 0 ))
	1228	while (( i < iout ))
	1229	do
	1230	(( i = i + 1 ))
	1231	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1232	then
	1233	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
	1234	then
	1235	actionout[$i]=""
	1236	elif [[ "${actionout[$i]}" = tra ]]
	1237	then
	1238	actionout[$i]=a
	1239	fi
	1240	(( maxcycle = 0 ))
	1241	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1242	eval catalogname=${pathout[$i]}
	1243	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1244	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1245	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1246	then
	1247
	1248	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1249	if cat /dev/null > $filename
	1250	then
	1251	rm $filename
	1252	else
	1253
	1254	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1255	if [[ ! -d $catalogname ]]
	1256	then
	1257	if mkdir -p $catalogname
	1258	then
	1259	printf "\n\n *** directory:"
	1260	printf "\n $catalogname"
	1261	printf "\n was created\n"
	1262	else
	1263	printf "\n\n +++ OUTPUT-file:"
	1264	printf "\n $filename"
	1265	printf "\n cannot be created, because directory does not exist"
	1266	printf "\n and cannot be created either"
	1267	printf "\n"
	1268	locat=output ; exit
	1269	fi 2>/dev/null
	1270	else
	1271	printf "\n\n +++ OUTPUT-file:"
	1272	printf "\n $filename"
	1273	printf "\n cannot be created, although directory exists"
	1274	printf "\n"
	1275	locat=output ; exit
	1276	fi
	1277	fi 2>/dev/null
	1278	else
	1279
	1280	# ZYKLUSNUMMER FESTSTELLEN
	1281	ls -1 -d $filename > filelist 2>/dev/null
	1282	ls -1 -d $filename.* >> filelist 2>/dev/null
	1283	while read zeile
	1284	do
	1285	cycle=$(print $zeile \| cut -f2 -d".")
	1286	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1287	then
	1288	(( icycle = 1 ))
	1289	else
	1290	(( icycle = $cycle + 1 ))
	1291	fi
	1292	if (( icycle > maxcycle ))
	1293	then
	1294	(( maxcycle = icycle ))
	1295	fi
	1296	done <filelist
	1297	rm filelist
	1298	fi
	1299
	1300	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1301	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1302	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1303	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1304	if [[ "${actionout[$i]}" != a ]]
	1305	then
	1306	if (( maxcycle > 0 ))
	1307	then
	1308	filename=${filename}.$maxcycle
	1309	if cat /dev/null > $filename
	1310	then
	1311	rm $filename
	1312	else
	1313	printf "\n +++ OUTPUT-file:"
	1314	printf "\n $filename"
	1315	printf "\n cannot be created"
	1316	locat=output ; exit
	1317	fi
	1318	fi
	1319	else
	1320	(( maxcycle = maxcycle - 1 ))
	1321	if (( maxcycle > 0 ))
	1322	then
	1323	filename=${filename}.$maxcycle
	1324	fi
	1325	fi
	1326
	1327	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1328	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1329	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1330	pathout[$i]=$filename
	1331	if (( maxcycle > 0 ))
	1332	then
	1333	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1334	else
	1335	frelout[$i]=${fname}${endout[$i]}
	1336	fi
	1337
	1338	fi
	1339	done
	1340
	1341
[83]	1342	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
	1343	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1344	then
	1345	if [[ "$dvrp_inc" = "" ]]
	1346	then
	1347	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
	1348	printf "\n This is required for the dvrp_graphics package.\n"
	1349	locat=dvrp; exit
	1350	fi
	1351	if [[ "$dvrp_lib" = "" ]]
	1352	then
	1353	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
	1354	printf "\n This is required for the dvrp_graphics package.\n"
	1355	locat=dvrp; exit
	1356	fi
	1357	fi
	1358
	1359
[1]	1360	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1361	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1362	# UEBERSETZT ZU WERDEN)
	1363	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1364	then
	1365	printf "\n +++ neither main program nor executable defined"
	1366	locat=source; exit
	1367	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1368	then
	1369	printf "\n +++ main program as well as executable defined"
	1370	locat=source; exit
	1371	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1372	then
	1373	do_compile=false
	1374	fi
	1375
	1376
	1377	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1378	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1379	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1380	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1381	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1382	then
	1383
[5]	1384	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1385	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1386
[5]	1387	if [[ $restart_run != true ]]
[1]	1388	then
	1389	rm -rf SOURCES_FOR_RUN_$fname
	1390	mkdir SOURCES_FOR_RUN_$fname
	1391	fi
	1392
	1393
	1394	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1395	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1396	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1397	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1398	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1399	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1400	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1401	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1402	# GESAMMELT
[5]	1403	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1404	then
	1405
	1406	source_list=""
	1407	cd $source_path
	1408
	1409
	1410	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1411	Names=$(ls -1 *.f90 2>&1)
	1412	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1413	Names=$(ls -1 *.F90 2>&1)
	1414	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1415	Names=$(ls -1 *.F 2>&1)
	1416	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1417	Names=$(ls -1 *.f 2>&1)
	1418	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1419	Names=$(ls -1 *.c 2>&1)
	1420	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1421
	1422
	1423	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1424	for dateiname in $Filenames
	1425	do
	1426	if [[ -w $dateiname ]]
	1427	then
	1428	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1429	then
	1430	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1431	source_list=$source_list"$dateiname "
	1432	fi
	1433	fi
	1434	done
	1435
	1436	cd - > /dev/null
	1437
	1438
[5]	1439	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1440	then
	1441
	1442	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1443	source_list=""
	1444	cd $source_path
	1445
	1446
	1447	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1448	if [[ ! -d .svn ]]
	1449	then
	1450	printf "\n\n +++ source directory"
	1451	printf "\n \"$source_path\" "
	1452	printf "\n is not under control of \"subversion\"."
	1453	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1454	fi
	1455
	1456
	1457	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1458	Filenames=""
[69]	1459	svn status > tmp_mrun
	1460	while read line
[5]	1461	do
	1462	firstc=`echo $line \| cut -c1`
	1463	if [[ $firstc = M \|\| $firstc = "?" ]]
	1464	then
	1465	Name=`echo "$line" \| cut -c8-`
	1466	extension=`echo $Name \| cut -d. -f2`
	1467	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1468	then
	1469	Filenames="$Filenames "$Name
	1470	fi
	1471	fi
[69]	1472	done < tmp_mrun
[5]	1473
	1474
	1475	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1476	for dateiname in $Filenames
	1477	do
	1478	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1479	source_list=$source_list"$dateiname "
	1480	done
	1481
	1482	cd - > /dev/null
	1483
	1484
[1]	1485	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1486	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1487	# VORHANDEN
[5]	1488	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1489	then
	1490
	1491	cd $source_path
	1492
	1493	for filename in $source_list
	1494	do
	1495
	1496	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1497	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1498	then
	1499	printf "\n +++ source code file: $filename"
	1500	printf "\n must not contain (\"/\") "
	1501	locat=source; exit
	1502	fi
	1503
	1504	if [[ ! -f $filename ]]
	1505	then
	1506	printf "\n +++ source code file: $filename"
	1507	printf "\n does not exist"
	1508	locat=source; exit
	1509	else
	1510	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1511	fi
	1512
	1513	done
	1514
	1515	cd - > /dev/null
	1516
	1517	fi
	1518
	1519
	1520	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1521	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1522	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1523	if [[ $restart_run != true ]]
[1]	1524	then
	1525
	1526	if [[ ! -f "$source_path/$mainprog" ]]
	1527	then
	1528	printf "\n\n +++ main program: $mainprog"
	1529	printf "\n does not exist in source directory"
	1530	printf "\n \"$source_path\"\n"
	1531	locat=source; exit
	1532	else
	1533	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1534	then
	1535	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1536	source_list=${mainprog}" $source_list"
	1537	fi
	1538	fi
	1539	fi
	1540
	1541
	1542	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1543	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1544	then
	1545
	1546	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1547	if [[ ! -d $add_source_path ]]
	1548	then
	1549	printf "\n\n +++ WARNING: additional source code directory"
	1550	printf "\n \"$add_source_path\" "
	1551	printf "\n does not exist or is not a directory."
	1552	printf "\n No source code will be used from this directory!\n"
	1553	add_source_path=""
	1554	sleep 3
	1555	else
	1556
	1557	cd $add_source_path
	1558
	1559	Names=$(ls -1 *.f90 2>&1)
	1560	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1561	Names=$(ls -1 *.F90 2>&1)
	1562	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1563	Names=$(ls -1 *.F 2>&1)
	1564	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1565	Names=$(ls -1 *.f 2>&1)
	1566	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1567	Names=$(ls -1 *.c 2>&1)
	1568	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1569
	1570	cd - > /dev/null
	1571	cd SOURCES_FOR_RUN_$fname
	1572
	1573	for dateiname in $AddFilenames
	1574	do
	1575	if [[ -f $dateiname ]]
	1576	then
	1577	printf "\n +++ source code file \"$dateiname\" found in additional"
	1578	printf "\n source code directory \"$add_source_path\" "
	1579	printf "\n as well as in directory \"$source_path\"."
	1580	locat=source; exit
	1581	fi
	1582
	1583	cp $add_source_path/$dateiname .
	1584	source_list="$source_list $dateiname"
	1585
	1586	# Default User-Interface von der Liste entfernen, falls Datei
	1587	# ein User-Interface enthaelt
	1588	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1589	then
[50]	1590	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
[1]	1591	then
	1592	rm -rf user_interface.f90
	1593	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
[50]	1594	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
[1]	1595	printf "\n since a user-interface is found in file"
	1596	printf "\n \"$add_source_path/$dateiname\" \n"
	1597	sleep 3
	1598	else
	1599	printf "\n\n *** user-interface file \"$dateiname\" "
	1600	printf "\n added to the files to be translated \n"
	1601	sleep 3
	1602	fi
	1603	fi
	1604	done
	1605
	1606	cd - > /dev/null
	1607	fi
	1608	fi
	1609
	1610
	1611	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1612	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1613	if [[ $restart_run != true && -n $package_list ]]
[1]	1614	then
	1615
	1616	cd $source_path
	1617
	1618	for package in $package_list
	1619	do
	1620
	1621	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1622
	1623	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1624	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1625	# LIEFERT
	1626	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1627
	1628
	1629	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1630	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1631	for source_list_name in $package_source_list
	1632	do
	1633	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1634	then
	1635
	1636	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1637	ending=`echo $source_list_name \| cut -f2 -d.`
	1638	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1639	then
	1640	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1641	source_list="$source_list $source_list_name"
	1642	fi
	1643	fi
	1644	done
	1645	done
	1646
	1647	cd - > /dev/null
	1648	fi
	1649
	1650
	1651	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1652	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[82]	1653	if [[ "$restart_run" != true ]]
[1]	1654	then
	1655	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1656	if [[ ! -f $makefile ]]
	1657	then
	1658	printf "\n +++ file \"$makefile\" does not exist"
	1659	locat=make; exit
	1660	else
	1661	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1662	fi
	1663	fi
	1664
	1665	fi # do_compile=true
	1666
	1667
	1668	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1669	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1670	if [[ $do_compile = true ]]
	1671	then
	1672
	1673	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1674	# ZUSAMMENSETZEN
[83]	1675	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1676	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1677	then
[82]	1678	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1679	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1680	then
[82]	1681	cpp_options="$cpp_options -D__nec"
	1682	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1683	then
	1684	cpp_options="$cpp_options -D__lc"
[1]	1685	else
[82]	1686	cpp_options="$cpp_options -D__$localhost"
[1]	1687	fi
[83]	1688
	1689	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1690	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1691	then
[82]	1692	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1693	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1694	else
[82]	1695	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1696	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1697	fi
[83]	1698
	1699	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1700	if [[ -n $package_list ]]
	1701	then
	1702	for package in $package_list
	1703	do
	1704	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1705	then
	1706	if [[ $package != "dvrp_graphics+1PE" ]]
	1707	then
[82]	1708	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1709	else
[82]	1710	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1711	export use_seperate_pe_for_dvrp_output=true
	1712	fi
	1713	else
	1714	if [[ $package != "dvrp_graphics+1PE" ]]
	1715	then
[82]	1716	cpp_options="$cpp_options -D__$package"
[1]	1717	else
[82]	1718	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1719	export use_seperate_pe_for_dvrp_output=true
	1720	fi
	1721	fi
	1722	done
	1723	fi
[83]	1724
	1725	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1726	if [[ -n $cpp_opts ]]
	1727	then
	1728	for popts in $cpp_opts
	1729	do
[82]	1730	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1731	then
	1732	cpp_options="${cpp_options},-D__$popts=__$popts"
	1733	else
	1734	cpp_options="$cpp_options -D__$popts"
	1735	fi
[1]	1736	done
	1737	fi
	1738
	1739	else
	1740
	1741
	1742	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1743	if [[ $do_remote = false ]]
	1744	then
	1745	if [[ ! -f $executable ]]
	1746	then
	1747	printf "\n +++ executable file: $executable"
	1748	printf "\n does not exist"
	1749	locat=executable; exit
	1750	fi
	1751	fi
	1752	fi
	1753
	1754
	1755	# JOBMODUS FESTSTELLEN
	1756	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1757	then
	1758	jobmo=BATCH
	1759	else
	1760	jobmo=INTERACTIVE
	1761	fi
	1762
	1763
	1764	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1765	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1766	if [[ "$compiler_name" = "" ]]
	1767	then
[82]	1768
	1769	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
	1770	locat=compiler_name; exit
	1771
[1]	1772	fi
	1773
	1774
	1775	# COMPILER AUF NECK UEBERSCHREIBEN
	1776	[[ $localhost = neck ]] && compiler_name=mpif90
	1777
	1778
	1779
	1780	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1781	kennung=$RANDOM
	1782	if [[ "$tmp_user_catalog" = "" ]]
	1783	then
	1784	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1785	then
	1786	tmp_user_catalog=$TMPDIR
	1787	elif [[ $localhost = nech ]]
	1788	then
	1789	tmp_user_catalog=$WRKSHR
	1790	else
	1791	tmp_user_catalog=/tmp
	1792	fi
	1793	fi
	1794	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1795
	1796
	1797	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1798	# BESTIMMEN
	1799	if [[ "$tmp_data_catalog" = "" ]]
	1800	then
	1801	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1802	then
	1803	tmp_data_catalog=$WORK/mrun_restart_data
	1804	elif [[ $localhost = nech ]]
	1805	then
	1806	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1807	else
	1808	tmp_data_catalog=/tmp/mrun_restart_data
	1809	fi
	1810	fi
	1811
	1812
	1813	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1814	# ERSETZEN
	1815	if [[ $do_remote = false && $do_compile = true ]]
	1816	then
	1817	eval fopts=\"$fopts\"
	1818	eval lopts=\"$lopts\"
	1819	fi
	1820
	1821
	1822
	1823	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[82]	1824	fopts="$fopts $netcdf_inc $dvrp_inc"
	1825	lopts="$lopts $netcdf_lib $dvrp_lib"
[1]	1826	ROPTS="$ropts"
[164]	1827	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit \|\| $host = lcfimm \|\| $host = lcxt4 ) && -n $numprocs ]]
[1]	1828	then
	1829	XOPT="-X $numprocs"
	1830	fi
	1831
	1832
	1833
	1834	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1835	# GRAMM BENOETIGT
	1836	done=false
	1837	while [[ $done = false ]]
	1838	do
	1839	cputime=$cpumax
	1840	if (( $cputime == 0 ))
	1841	then
	1842	printf "\n +++ cpu-time is undefined"
	1843	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1844	printf "\n >>> "
	1845	read cputime 1>/dev/null 2>&1
	1846	else
	1847	done=true
	1848	fi
	1849	cpumax=$cputime
	1850	done
	1851
	1852	(( minuten = cputime / 60 ))
	1853	(( sekunden = cputime - minuten * 60 ))
	1854
	1855
	1856	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	1857	if [[ $do_batch = true ]]
	1858	then
	1859	done=false
	1860	while [[ $done = false ]]
	1861	do
	1862	if (( memory == 0 ))
	1863	then
	1864	printf "\n +++ memory demand is undefined"
	1865	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	1866	printf "\n >>> "
	1867	read memory 1>/dev/null 2>&1
	1868	else
	1869	done=true
	1870	fi
	1871	done
	1872	fi
	1873
	1874
	1875	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	1876	if [[ $do_remote = true && -z $remote_username ]]
	1877	then
	1878	while [[ -z $remote_username ]]
	1879	do
	1880	printf "\n +++ username on remote host \"$host\" is undefined"
	1881	printf "\n >>> Please type username:"
	1882	printf "\n >>> "
	1883	read remote_username
	1884	done
	1885	mc="$mc -u$remote_username"
	1886	fi
	1887
	1888	###########################################################################
	1889	# HEADER-AUSGABE
	1890	###########################################################################
	1891
	1892
	1893	calltime=$(date)
	1894	printf "\n"
	1895	# [[ $silent = false ]] && clear
	1896	printf "#--------------------------------------------------------------# \n"
	1897	printf "\| $version$calltime \| \n"
	1898	printf "\| \| \n"
	1899	spalte1="called on:"; spalte2=$localhost_realname
	1900	printf "\| $spalte1$spalte2 \| \n"
	1901	if [[ $local_compile = false ]]
	1902	then
	1903	if [[ $do_remote = true ]]
	1904	then
	1905	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	1906	else
	1907	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	1908	fi
	1909	else
	1910	spalte1="compiling test only!"; spalte2=""
	1911	fi
	1912	printf "\| $spalte1$spalte2 \| \n"
	1913	if [[ -n $numprocs ]]
	1914	then
	1915	spalte1="number of PEs:"; spalte2=$numprocs
	1916	printf "\| $spalte1$spalte2 \| \n"
	1917	fi
	1918	if [[ -n $tasks_per_node ]]
	1919	then
	1920	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	1921	printf "\| $spalte1$spalte2 \| \n"
	1922	fi
	1923	if [[ $threads_per_task != 1 ]]
	1924	then
	1925	spalte1="threads per task:"; spalte2="$threads_per_task"
	1926	printf "\| $spalte1$spalte2 \| \n"
	1927	fi
	1928	printf "\| \| \n"
	1929	if [[ $do_compile = true ]]
	1930	then
[82]	1931	spalte1=cpp-directives:; spalte2=$cpp_options
[1]	1932	printf "\| $spalte1$spalte2 \| \n"
[82]	1933	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	1934	while [[ "$zeile" != "" ]]
	1935	do
	1936	spalte1=""
	1937	spalte2=$zeile
	1938	printf "\| $spalte1$spalte2 \| \n"
	1939	zeile=$(echo "$zeile" \| cut -c41-)
	1940	done
	1941
[82]	1942	spalte1=compiler-options:; spalte2="$fopts"
[1]	1943	printf "\| $spalte1$spalte2 \| \n"
[82]	1944	zeile=$(echo "$fopts" \| cut -c41-)
[1]	1945	while [[ "$zeile" != "" ]]
	1946	do
	1947	spalte1=""
	1948	spalte2=$zeile
	1949	printf "\| $spalte1$spalte2 \| \n"
	1950	zeile=$(echo "$zeile" \| cut -c41-)
	1951	done
	1952
[82]	1953	spalte1=linker-options:; spalte2=$lopts
[1]	1954	printf "\| $spalte1$spalte2 \| \n"
[82]	1955	zeile=$(echo "$lopts" \| cut -c41-)
[1]	1956	while [[ "$zeile" != "" ]]
	1957	do
	1958	spalte1=""
	1959	spalte2=$zeile
	1960	printf "\| $spalte1$spalte2 \| \n"
	1961	zeile=$(echo "$zeile" \| cut -c41-)
	1962	done
	1963
	1964	spalte1="main program":; spalte2=$mainprog
	1965	printf "\| $spalte1$spalte2 \| \n"
	1966	else
	1967	spalte1=executable:; spalte2=$executable
	1968	printf "\| $spalte1$spalte2 \| \n"
	1969	fi
	1970	printf "\| \| \n"
	1971	spalte1="base name of files":; spalte2=$fname
	1972	printf "\| $spalte1$spalte2 \| \n"
	1973	if [[ $fname != $afname ]]
	1974	then
	1975	spalte1="base name of input files":; spalte2=$afname
	1976	printf "\| $spalte1$spalte2 \| \n"
	1977	fi
	1978	spalte1="INPUT control list":; spalte2=$input_list
	1979	printf "\| $spalte1$spalte2 \| \n"
	1980	spalte1="OUTPUT control list":; spalte2=$output_list
	1981	printf "\| $spalte1$spalte2 \| \n"
	1982
	1983	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	1984	then
	1985	spalte1="memory demand / PE":; spalte2="$memory MB"
	1986	printf "\| $spalte1$spalte2 \| \n"
	1987	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	1988	printf "\| $spalte1$spalte2 \| \n"
	1989	fi
	1990
	1991	if [[ $do_compile = true ]]
	1992	then
	1993	printf "\| \| \n"
	1994	printf "\| Files to be compiled: \| \n"
	1995	zeile=$source_list
	1996	while [[ "$zeile" != "" ]]
	1997	do
	1998	spalte3=$zeile
	1999	printf "\| $spalte3 \| \n"
	2000	zeile=$(echo "$zeile" \| cut -c61-)
	2001	done
	2002	fi
	2003	printf "#--------------------------------------------------------------#"
	2004
	2005
	2006
	2007	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2008	if [[ $do_trace = true ]]
	2009	then
	2010	(( i = 0 ))
	2011	while (( i < iin ))
	2012	do
	2013	(( i = i + 1 ))
	2014	if (( i == 1 ))
	2015	then
	2016	printf "\n\n >>> INPUT-file assignments:\n"
	2017	fi
	2018	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2019	done
	2020	(( i = 0 ))
	2021	while (( i < iout ))
	2022	do
	2023	(( i = i + 1 ))
	2024	if (( i == 1 ))
	2025	then
	2026	printf "\n\n >>> OUTPUT-file assignments:\n"
	2027	fi
	2028	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2029	done
	2030	(( i = 0 ))
	2031	while (( i < iic ))
	2032	do
	2033	(( i = i + 1 ))
	2034	if (( i == 1 ))
	2035	then
	2036	printf "\n\n >>> INPUT-commands:\n"
	2037	fi
	2038	printf "\n ${in_command[$i]}"
	2039	done
	2040	(( i = 0 ))
	2041	while (( i < ioc ))
	2042	do
	2043	(( i = i + 1 ))
	2044	if (( i == 1 ))
	2045	then
	2046	printf "\n\n >>> OUTPUT-commands:\n"
	2047	fi
	2048	printf "\n ${out_command[$i]}"
	2049	done
	2050	fi
	2051
	2052
	2053	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2054	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2055	then
	2056	antwort=dummy
	2057	printf "\n\n"
	2058	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2059	do
	2060	printf " >>> everything o.k. (y/n) ? "
	2061	read antwort
	2062	done
	2063	if [[ $antwort = n \|\| $antwort = N ]]
	2064	then
	2065	locat=user_abort; (( iec = 0 )); exit
	2066	fi
	2067	if [[ $do_batch = true ]]
	2068	then
	2069	printf " >>> batch-job will be created and submitted"
	2070	else
	2071	if [[ $local_compile = false ]]
	2072	then
	2073	printf " >>> MRUN will now continue to execute on this machine"
	2074	else
	2075	printf " >>> a test compilation will now be carried out on this machine"
	2076	fi
	2077	fi
	2078	fi
	2079
	2080
	2081
	2082
	2083	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2084	# CHENDE AKTIONEN DURCHGEFUEHRT
	2085	if [[ $do_batch = false ]]
	2086	then
	2087
	2088
	2089	# TEMPORAEREN KATALOG ERZEUGEN
	2090	mkdir -p $TEMPDIR
	2091	chmod go+rx $TEMPDIR
	2092	tmpcreate=true
	2093
	2094
	2095	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2096	# TEMPORAERES VERZEICHNIS KOPIEREN
	2097	if [[ $do_compile = true ]]
	2098	then
	2099
	2100	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2101	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2102	if [[ $localhost = nech ]]
	2103	then
	2104	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2105	if mkdir -p $TEMPDIR_COMPILE
	2106	then
	2107	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2108	printf "\n is generated as temporary directory for cross compiling\n"
	2109	else
	2110	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2111	printf "\n needed for cross compilation failed"
	2112	locat=compile
	2113	exit
	2114	fi
	2115	else
	2116	TEMPDIR_COMPILE=$TEMPDIR
	2117	fi
	2118
	2119
[82]	2120	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2121	line=""
	2122	grep "%depository_path" $config_file > tmp_mrun
	2123	while read line
	2124	do
	2125	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2126	then
	2127	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2128	then
[82]	2129	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2130	fi
[82]	2131	fi
	2132	done < tmp_mrun
[1]	2133
[82]	2134	line=""
	2135	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2136	while read line
	2137	do
	2138	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2139	then
[82]	2140	local_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2141	fi
[82]	2142	done < tmp_mrun
[1]	2143
[82]	2144	if [[ "$local_depository_path" = "" ]]
	2145	then
	2146	if [[ "$global_depository_path" != "" ]]
[1]	2147	then
[82]	2148	local_depository_path=$global_depository_path
[1]	2149	else
[82]	2150	printf "\n\n +++ no depository path found in configuration file"
	2151	printf "\n for local host \"$localhost\" "
	2152	printf "\n please set \"\%depository_path\" in configuration file\n"
	2153	locat=config_file; exit
[1]	2154	fi
[82]	2155	fi
	2156	eval local_depository_path=$local_depository_path
[1]	2157
[82]	2158	basename=`print $mainprog \| cut -f1 -d"."`
	2159	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2160	if [[ ! -f $make_depository ]]
	2161	then
	2162	printf "\n"
	2163	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2164	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2165	else
	2166	cp $make_depository $TEMPDIR_COMPILE
[1]	2167	cd $TEMPDIR_COMPILE
[82]	2168	tar -xf $make_depository > /dev/null 2>&1
[1]	2169	cd - > /dev/null
	2170	fi
[82]	2171
	2172	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2173
	2174	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2175	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2176	# MAKEFILE EINTRAGEN
	2177	cd $TEMPDIR_COMPILE
	2178	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2179	if [[ "$interface_file" != "" ]]
	2180	then
	2181	interface_file=`echo $interface_file \| cut -d"." -f1`
	2182	mv Makefile Makefile_old
	2183	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2184	fi
	2185	cd - > /dev/null
[1]	2186	else
	2187	cp $executable ${TEMPDIR}/a.out
	2188	fi
	2189
	2190
	2191	# WECHSEL IN TEMPORAEREN KATALOG
	2192	cd $TEMPDIR
	2193	printf "\n *** changed to temporary directory: $TEMPDIR"
	2194
	2195
	2196	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2197	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2198	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2199	# ERMITTELN
	2200	(( i = 0 ))
	2201	while (( i < iout ))
	2202	do
	2203	(( i = i + 1 ))
	2204	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2205	then
	2206	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2207	else
	2208	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2209	fi
	2210	done
	2211
	2212
	2213	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2214	if [[ $do_compile = true ]]
	2215	then
	2216
	2217
	2218	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2219	printf "\n\n\n *** compilation starts \n$striche\n"
	2220	printf " *** compilation with make using following options:\n"
	2221	printf " compilername: $compiler_name\n"
	2222	printf " options: $fopts\n"
	2223	printf " preprocessor-directives: $cpp_options \n"
	2224	printf " linker-options: $lopts \n"
	2225	printf " source code files: $source_list \n"
	2226
	2227	if [[ $localhost = nech ]]
[1]	2228	then
[82]	2229	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2230	cp $TEMPDIR_COMPILE/a.out .
	2231	[[ $? != 0 ]] && compile_error=true
	2232	rm -rf $TEMPDIR_COMPILE
[1]	2233	else
[118]	2234	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
[82]	2235	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
	2236	fi
[1]	2237
	2238	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2239	then
	2240	printf "\n +++ error occured while compiling or linking"
	2241	locat=compile
	2242	exit
	2243	else
	2244	printf "$striche\n *** compilation finished \n"
	2245	fi
	2246	fi
	2247
	2248
	2249	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2250	if [[ $local_compile = true ]]
	2251	then
	2252	cd $HOME
	2253	rm -rf $TEMPDIR
	2254	locat=local_compile; exit
	2255	fi
	2256
	2257
	2258	# BEREITSTELLEN DER INPUT-DATEIEN
	2259	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2260	(( i = 0 ))
	2261	while (( i < iin ))
	2262	do
	2263	(( i = i + 1 ))
	2264	if (( i == 1 ))
	2265	then
	2266	printf "\n\n *** providing INPUT-files:\n$striche"
	2267	fi
	2268
	2269
	2270	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2271	if [[ "${transin[$i]}" = unavailable ]]
	2272	then
	2273	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2274	then
	2275	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2276	printf "\n is not available!"
	2277	else
	2278	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2279	printf "\n is not available!"
	2280	fi
	2281	continue
	2282	fi
	2283
	2284	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2285	files_for_pes=false; datentyp=file
	2286	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2287	then
	2288	files_for_pes=true; datentyp=directory
	2289	actionin[$i]=""
	2290	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2291	then
	2292	actionin[$i]=""
	2293	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2294	then
	2295	files_for_pes=true; datentyp=directory
	2296	actionin[$i]="ar"
	2297	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2298	then
	2299	actionin[$i]="ar"
	2300	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2301	then
	2302	files_for_pes=true; datentyp=directory
	2303	actionin[$i]="fl"
	2304	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2305	then
	2306	actionin[$i]="fl"
	2307	fi
	2308
	2309	if [[ $files_for_pes = true ]]
	2310	then
	2311	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2312	else
	2313	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2314	fi
	2315
	2316	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2317	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2318	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2319	# SERVER ZU HOLEN
	2320	if [[ "${actionin[$i]}" = fl ]]
	2321	then
	2322	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2323	if [[ $files_for_pes = false ]]
	2324	then
	2325	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2326	then
	2327	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2328	got_tmp[$i]=true
	2329	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2330	then
	2331	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2332	printf "\n *** trying to use backup copy in \"$WORK\" "
	2333	cp $WORK/${frelin[$i]} ${localin[$i]}
	2334	else
	2335	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2336	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2337	printf "\n *** trying to get copy from archive"
	2338	actionin[$i]=ar
	2339	fi
	2340	else
	2341	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2342	then
	2343	mkdir ${localin[$i]}
[149]	2344	cd $tmp_data_catalog/${frelin[$i]}
	2345	for file in $(ls *)
	2346	do
	2347	ln $file $TEMPDIR/${localin[$i]}
	2348	done
	2349	cd $TEMPDIR
[1]	2350	got_tmp[$i]=true
	2351	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2352	then
	2353	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2354	printf "\n *** trying to use backup copy in \"$WORK\" "
	2355	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2356	else
	2357	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2358	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2359	printf "\n *** trying to get copy from archive"
	2360	actionin[$i]=ar
	2361	fi
	2362	fi
	2363	fi
	2364
	2365
	2366	# DATEI LIEGT AUF ARCHIV-SERVER
	2367	if [[ "${actionin[$i]}" = ar ]]
	2368	then
	2369
	2370	if [[ $files_for_pes = false ]]
	2371	then
	2372	printf "\n file will be restored from archive-system ($archive_system)!"
	2373	else
	2374	printf "\n directory will be restored from archive-system ($archive_system)!"
	2375	fi
	2376
	2377	file_restored=false
	2378
	2379	if [[ $archive_system = asterix ]]
	2380	then
	2381	do_stagein=true
	2382	(( stagein_anz = 0 ))
	2383	while [[ $do_stagein = true ]]
	2384	do
	2385	if [[ $files_for_pes = false ]]
	2386	then
	2387	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2388	else
	2389	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2390	fi
	2391	cat STAGEIN_OUTPUT
	2392	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2393	then
	2394	file_restored=true
	2395	do_stagein=false
	2396	else
	2397	(( stagein_anz = stagein_anz + 1 ))
	2398	if (( stagein_anz == 10 ))
	2399	then
	2400	printf "\n +++ stagein stoped after 10 tries"
	2401	locat=stage
	2402	exit
	2403	fi
	2404	printf "\n +++ restoring from archive failed, trying again:"
	2405	sleep 900
	2406	fi
	2407	done
	2408	elif [[ $archive_system = DMF ]]
	2409	then
	2410	if [[ $files_for_pes = false ]]
	2411	then
	2412	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2413	locat=DMF
	2414	exit
	2415	else
	2416	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2417	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2418	file_restored=true
	2419	fi
	2420	elif [[ $archive_system = tivoli ]]
	2421	then
	2422	if [[ $files_for_pes = false ]]
	2423	then
	2424	if [[ $localhost = ibmh ]]
	2425	then
	2426	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2427	else
	2428	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2429	fi
	2430	else
	2431	(( inode = 0 ))
	2432	while (( inode < nodes ))
	2433	do
	2434	if [[ $localhost = ibmh ]]
	2435	then
	2436	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2437	else
	2438	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2439	fi
	2440	(( inode = inode + 1 ))
	2441	done
	2442	fi
	2443	file_restored=true
	2444	elif [[ $archive_system = ut ]]
	2445	then
	2446	if [[ $files_for_pes = false ]]
	2447	then
	2448	cp $UT/${frelin[$i]} .
	2449	else
	2450	(( inode = 0 ))
	2451	while (( inode < nodes ))
	2452	do
	2453	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2454	(( inode = inode + 1 ))
	2455	done
	2456	fi
	2457	file_restored=true
	2458	else
	2459	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2460	locat=rearchive
	2461	exit
	2462	fi
	2463
	2464	if [[ $file_restored = true ]]
	2465	then
	2466
	2467	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2468	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2469	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2470	if [[ $files_for_pes = false ]]
	2471	then
	2472	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2473	else
	2474	mkdir $tmp_data_catalog/${frelin[$i]}
	2475	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2476	fi
	2477	got_tmp[$i]=true
	2478
	2479	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2480	mv ${frelin[$i]} ${localin[$i]}
	2481
	2482	fi
	2483	fi
	2484
	2485
	2486	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2487	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2488	then
	2489
	2490	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2491	then
	2492
	2493	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2494	printf "\n file will be provided for $numprocs processors"
	2495	mkdir ${localin[$i]}
	2496	ival=$numprocs
	2497	(( ii = 0 ))
	2498	while (( ii <= ival-1 ))
	2499	do
	2500	if (( ii < 10 ))
	2501	then
	2502	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2503	elif (( ii < 100 ))
	2504	then
	2505	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2506	elif (( ii < 1000 ))
	2507	then
	2508	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2509	else
	2510	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2511	fi
	2512	(( ii = ii + 1 ))
	2513	done
	2514
	2515	else
	2516
	2517	if [[ $files_for_pes = true ]]
	2518	then
	2519
	2520	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2521	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2522	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2523	# PER MOVE UMBENANNT WERDEN
	2524	printf "\n providing $numprocs files for the respective processors"
	2525	mkdir ${localin[$i]}
	2526	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2527
	2528	else
	2529	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
	2530	cp ${absnamein[$i]} ${localin[$i]}
	2531	fi
	2532	fi
	2533	fi
	2534
	2535	done
	2536	if (( i != 0 ))
	2537	then
	2538	printf "\n$striche\n *** all INPUT-files provided \n"
	2539	fi
	2540
	2541
	2542	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2543	# LESEN VON PALM)
	2544	cat > ENVPAR << %%END%%
	2545	&envpar run_identifier = '$fname', host = '$localhost',
	2546	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
[75]	2547	maximum_cpu_time_allowed = ${cpumax}.,
	2548	revision = '$global_revision' /
[1]	2549
	2550	%%END%%
	2551
	2552
	2553	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2554	(( i = 0 ))
	2555	while (( i < iic ))
	2556	do
	2557	(( i = i + 1 ))
	2558	if (( i == 1 ))
	2559	then
	2560	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2561	fi
	2562	printf "\n >>> ${in_command[$i]}"
	2563	eval ${in_command[$i]}
	2564	if (( i == iic ))
	2565	then
	2566	printf "\n$striche\n"
	2567	fi
	2568	done
	2569
	2570
	2571	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2572	cpurest=${cpumax}.
	2573
	2574
	2575	# PROGRAMMSTART
	2576	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2577	PATH=$PATH:$TEMPDIR
	2578
	2579	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2580	then
	2581	if [[ "$ENVIRONMENT" = BATCH ]]
	2582	then
	2583	printf "\n +++ debug is allowed in interactive mode only"
	2584	locat=debug
	2585	exit
	2586	fi
[5]	2587	if [[ $localhost = decalpha ]]
[1]	2588	then
	2589	dxladebug a.out
	2590	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2591	then
	2592
	2593	# SETUP THE IBM MPI ENVIRONMENT
	2594	export MP_SHARED_MEMORY=yes
	2595	export AIXTHREADS_SCOPE=S
	2596	export OMP_NUM_THREADS=$threads_per_task
	2597	export AUTHSTATE=files
	2598	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2599
	2600	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2601	export MP_ADAPTER_USE=shared
	2602	export MP_CPU_USE=multiple
	2603	export MP_TIMEOUT=1200
	2604
	2605	unset MP_TASK_AFFINITY
	2606
	2607	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2608	#(( ii = 1 ))
	2609	#while (( ii <= $numprocs ))
	2610	#do
	2611	# echo $localhost_realname >> hostfile
	2612	# (( ii = ii + 1 ))
	2613	#done
	2614	#export MP_HOSTFILE=hostfile
	2615
	2616	if [[ "$LOADLBATCH" = yes ]]
	2617	then
	2618	totalview poe a.out $ROPTS
	2619	else
	2620	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2621	export TVDSVRLAUNCHCMD=ssh
	2622	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2623	fi
	2624	else
	2625	printf "\n +++ no debug available on \"$localhost\" "
	2626	printf "\n or not implemented in mrun so far"
	2627	locat=debug
	2628	exit
	2629	fi
	2630	else
	2631	if [[ -n $numprocs ]]
	2632	then
	2633
	2634	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2635	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2636	then
	2637	# SETUP THE IBM MPI ENVIRONMENT
	2638	export MP_SHARED_MEMORY=yes
	2639	export AIXTHREAD_SCOPE=S
	2640	export OMP_NUM_THREADS=$threads_per_task
	2641	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2642	export AUTHSTATE=files
	2643	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2644	# export MP_PRINTENV=yes
	2645
	2646	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2647	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2648	export MP_WAIT_MODE=poll
	2649	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2650	# export MP_EAGER_LIMIT=65535
	2651
	2652	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2653	# export MPJ_MTAB=128
	2654	# export MPJ_ALLTOALL=1
	2655	# export MPJ_ALLTOALLV=1
	2656
	2657	if [[ "$LOADLBATCH" = yes ]]
	2658	then
	2659	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2660	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2661	then
[102]	2662	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
[1]	2663	else
[102]	2664	poe ./a.out $ROPTS
[1]	2665	fi
	2666	else
	2667	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2668	then
[102]	2669	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
[1]	2670	elif [[ $localhost = ibmy ]]
	2671	then
	2672	if [[ -f $hostfile ]]
	2673	then
	2674	cp $hostfile hostfile
	2675	else
	2676	(( ii = 1 ))
	2677	while (( ii <= $numprocs ))
	2678	do
	2679	echo $localhost_realname >> hostfile
	2680	(( ii = ii + 1 ))
	2681	done
	2682	fi
	2683	export MP_HOSTFILE=hostfile
[102]	2684	./a.out -procs $tasks_per_node $ROPTS
[1]	2685	else
	2686	if [[ "$host_file" = "" ]]
	2687	then
	2688	printf "\n +++ no hostfile given in configuration file"
	2689	locat=config_file
	2690	exit
	2691	else
	2692	eval host_file=$host_file
	2693	fi
	2694	export MP_HOSTFILE=$host_file
[102]	2695	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
[1]	2696	fi
	2697	fi
	2698	elif [[ $host = nech \|\| $host = neck ]]
	2699	then
	2700	(( ii = nodes ))
	2701	if [[ $ii = 1 ]]
	2702	then
	2703	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	2704	export MPIPROGINF=YES
[61]	2705	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	2706	echo "*** execution on single node with mpirun"
[102]	2707	mpirun -np $numprocs ./a.out $ROPTS
[1]	2708	else
	2709	(( i = 0 ))
	2710	while (( i < ii ))
	2711	do
	2712	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	2713	(( i = i + 1 ))
	2714	done
	2715
	2716	echo "#!/bin/sh" > mpi_exec_shell
	2717	echo " " >> mpi_exec_shell
	2718	echo "set -u" >> mpi_exec_shell
	2719	echo "F_ERRCNT=0" >> mpi_exec_shell
	2720	echo "MPIPROGINV=YES" >> mpi_exec_shell
	2721	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	2722	echo "cpurest=$cpurest" >> mpi_exec_shell
	2723	echo "fname=$fname" >> mpi_exec_shell
	2724	echo "localhost=$localhost" >> mpi_exec_shell
	2725	echo "return_addres=$return_addres" >> mpi_exec_shell
	2726	echo "return_username=$return_username" >> mpi_exec_shell
	2727	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	2728	echo "write_binary=$write_binary" >> mpi_exec_shell
	2729	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2730	echo " " >> mpi_exec_shell
	2731	echo "export F_ERRCNT" >> mpi_exec_shell
	2732	echo "export MPIPROGINV" >> mpi_exec_shell
	2733	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	2734	echo "export cpurest" >> mpi_exec_shell
	2735	echo "export fname" >> mpi_exec_shell
	2736	echo "export localhost" >> mpi_exec_shell
	2737	echo "export return_addres" >> mpi_exec_shell
	2738	echo "export return_username" >> mpi_exec_shell
	2739	echo "export tasks_per_node" >> mpi_exec_shell
	2740	echo "export write_binary" >> mpi_exec_shell
	2741	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2742	echo " " >> mpi_exec_shell
[102]	2743	echo "exec ./a.out" >> mpi_exec_shell
[1]	2744
	2745	chmod u+x mpi_exec_shell
	2746	export MPIPROGINF=YES
	2747	mpirun -f multinode_config &
	2748	wait
	2749
	2750	fi
[82]	2751	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
[1]	2752	then
	2753
	2754	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	2755	# DOES NOT EXIST
	2756	if [[ -f $hostfile ]]
	2757	then
	2758	cp $hostfile hostfile
	2759	else
	2760	(( ii = 1 ))
	2761	while (( ii <= $numprocs / $threads_per_task ))
	2762	do
	2763	echo $localhost_realname >> hostfile
	2764	(( ii = ii + 1 ))
	2765	done
	2766	fi
	2767	(( ii = $numprocs / $threads_per_task ))
	2768	eval zeile=\"`head -n $ii hostfile`\"
	2769	printf "\n *** running on: $zeile"
	2770	export OMP_NUM_THREADS=$threads_per_task
	2771	if [[ $threads_per_task != 1 ]]
	2772	then
	2773	printf "\n threads per task: $threads_per_task"
	2774	fi
[102]	2775	if [[ $run_coupled_model = false ]]
[1]	2776	then
[102]	2777	printf "\n\n"
[164]	2778	if [[ $host = lcxt4 ]]
	2779	then
	2780	aprun -n $ii -N $tasks_per_node a.out $ROPTS
	2781	else
	2782	mpiexec -machinefile hostfile -n $ii a.out $ROPTS
	2783	fi
[1]	2784	else
[102]	2785	(( iii = ii / 2 ))
[164]	2786	echo "atmosphere_to_ocean" > runfile_atmos
	2787	echo "ocean_to_atmosphere" > runfile_ocean
	2788
[102]	2789	printf "\n coupled run ($iii atmosphere, $iii ocean)"
	2790	printf "\n\n"
[164]	2791
	2792	if [[ $host == lcxt4 ]]
	2793	then
	2794	aprun -n $iii -N $tasks_per_node a.out < runfile_atmos $ROPTS &
	2795	aprun -n $iii -N $tasks_per_node a.out < runfile_ocean $ROPTS &
	2796	else
	2797
	2798	# WORKAROUND BECAUSE mpiexec WITH -env option IS NOT AVAILABLE ON SOME SYSTEMS
	2799	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_atmos &
	2800	mpiexec -machinefile hostfile -n $iii a.out $ROPTS < runfile_ocean &
	2801	# mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
	2802	# mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
	2803	fi
[102]	2804	wait
[1]	2805	fi
[102]	2806
	2807	# if [[ $scirocco = true ]]
	2808	# then
	2809	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
	2810	# else
	2811	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
	2812	# fi
	2813
[1]	2814	elif [[ $host = decalpha ]]
	2815	then
[102]	2816	dmpirun -np $numprocs a.out $ROPTS
[1]	2817	elif [[ $host = lctit ]]
	2818	then
	2819	export runfile=runfile.$kennung
	2820
	2821	echo "cd $PWD" > $runfile
	2822	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	2823	echo "export cpurest=$cpurest" >> $runfile
	2824	echo "export fname=$fname" >> $runfile
	2825	echo "export localhost=$localhost" >> $runfile
	2826	echo "export return_addres=$return_addres" >> $runfile
	2827	echo "export return_username=$return_username" >> $runfile
	2828	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	2829	echo "export write_binary=$write_binary" >> $runfile
	2830	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	2831	echo "./a.out" >> $runfile
	2832	chmod u+x $runfile
	2833
	2834	if [[ "$QUEUE" = interactive ]]
	2835	then
[102]	2836	mpirun -np $numprocs a.out $ROPTS
[1]	2837	else
[127]	2838	(( mem_tsubame = $memory / 1024.0 ))
	2839	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
[118]	2840	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
[126]	2841	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
[1]	2842	fi
	2843
	2844	rm $runfile
	2845	else
[102]	2846	mpprun -n $numprocs a.out $ROPTS
[1]	2847	fi
	2848	[[ $? != 0 ]] && execution_error=true
	2849
	2850
	2851	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	2852	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	2853	then
	2854	apprentice
	2855	fi
	2856	else
[102]	2857	a.out $ROPTS
[1]	2858	fi
	2859	fi
	2860	if [[ $? != 0 \|\| $execution_error = true ]]
	2861	then
	2862
	2863	# ABBRUCH BEI LAUFZEITFEHLER
[102]	2864	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	2865	printf "\n +++ runtime error occured"
	2866	locat=execution
	2867	exit
	2868	else
[102]	2869	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	2870	printf "\n$striche\n *** execution finished \n"
	2871	fi
	2872
	2873
	2874
	2875	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	2876	(( i = 0 ))
	2877	while (( i < ioc ))
	2878	do
	2879	(( i = i + 1 ))
	2880	if (( i == 1 ))
	2881	then
	2882	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	2883	fi
	2884	printf "\n >>> ${out_command[$i]}"
	2885	eval ${out_command[$i]}
	2886	if (( i == ioc ))
	2887	then
	2888	printf "\n$striche\n"
	2889	fi
	2890	done
	2891
	2892
	2893	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	2894	if [[ $do_trace = true ]]
	2895	then
	2896	printf "\n\n"
	2897	ls -al
	2898	fi
	2899
	2900
	2901
	2902	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	2903	(( i = 0 ))
	2904	while (( i < iout ))
	2905	do
	2906	(( i = i + 1 ))
	2907	if (( i == 1 ))
	2908	then
	2909	printf "\n\n *** saving OUTPUT-files:\n$striche"
	2910	fi
	2911
	2912	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2913	files_for_pes=false; filetyp=file
	2914	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	2915	then
	2916	files_for_pes=true; filetyp=directory
	2917	actionout[$i]=""
	2918	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	2919	then
	2920	actionout[$i]=""
	2921	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	2922	then
	2923	files_for_pes=true; filetyp=directory
	2924	actionout[$i]="ar"
	2925	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	2926	then
	2927	actionout[$i]="ar"
	2928	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	2929	then
	2930	files_for_pes=true; filetyp=directory
	2931	actionout[$i]="fl"
	2932	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	2933	then
	2934	actionout[$i]="fl"
	2935	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	2936	then
	2937	files_for_pes=true; filetyp=directory
	2938	actionout[$i]="tr"
	2939	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	2940	then
	2941	actionout[$i]="tr"
	2942	fi
	2943
	2944	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	2945	then
	2946	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
	2947	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
	2948	then
	2949	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	2950	else
	2951
	2952
	2953	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	2954	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	2955	# REMOTE-RECHNUNGEN
	2956	if [[ "${actionout[$i]}" = tr ]]
	2957	then
	2958	if [[ $localhost != $fromhost ]]
	2959	then
	2960	if [[ $files_for_pes = false ]]
	2961	then
	2962	cps=""
	2963	cst=""
	2964	else
	2965	cps=-c
	2966	cst="/"
	2967	fi
	2968	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	2969	then
	2970
	2971	# TRANSFER IN EIGENSTAENDIGEM JOB
	2972	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	2973	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	2974	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	2975	if [[ $files_for_pes = false ]]
	2976	then
	2977	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	2978	else
	2979	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	2980	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	2981	fi
	2982
	2983	echo "set -x" > transfer_${localout[$i]}
	2984	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	2985
	2986	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	2987	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	2988	printf "\n or higher cycle\n"
	2989	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	2990
[1]	2991	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	2992
	2993	if [[ $localhost = nech ]]
	2994	then
[82]	2995	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	2996	else
	2997	if [[ "$LOGNAME" = b323013 ]]
	2998	then
[164]	2999	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3000	else
[164]	3001	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3002	fi
	3003	fi
	3004
	3005	else
	3006
	3007	# TRANSFER INNERHALB DIESES JOBS
	3008	transfer_failed=false
[82]	3009	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	3010	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	3011	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3012	[[ $? != 0 ]] && transfer_failed=true
[1]	3013
	3014	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3015	# LOKALER MASCHINE ANLEGEN
	3016	if [[ $transfer_failed = true ]]
	3017	then
	3018	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3019	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3020
	3021	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3022	# ANLEGEN.
	3023	eval local_catalog=${pathout[$i]}
	3024	if [[ ! -d $local_catalog ]]
	3025	then
	3026	printf " *** local directory does not exist. Trying to create:\n"
	3027	printf " $local_catalog \n"
	3028	mkdir -p $local_catalog
	3029	fi
	3030	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3031	transfer_problems=true
	3032	fi
	3033	fi
	3034	else
	3035
	3036	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3037	actionout[$i]=""
	3038	fi
	3039	fi
	3040
	3041
	3042	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3043	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3044	# REMOTE-RECHNUNGEN
	3045	if [[ "${actionout[$i]}" = tra ]]
	3046	then
	3047	if [[ $localhost != $fromhost ]]
	3048	then
	3049	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3050	then
	3051
	3052	# TRANSFER IN EIGENSTAENDIGEM JOB
	3053	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3054	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3055	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3056	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3057
	3058	echo "set -x" > transfer_${localout[$i]}
	3059	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3060
	3061	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3062	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3063	printf "\n or higher cycle\n"
	3064	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3065
[1]	3066	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3067
	3068	if [[ $localhost = nech ]]
	3069	then
[82]	3070	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3071	else
	3072	if [[ $LOGNAME = b323013 ]]
	3073	then
[164]	3074	subjob -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3075	else
[164]	3076	subjob -d -v -q c1 -X 0 -m 1000 -t 900 -c $job_catalog transfer_${localout[$i]}
[1]	3077	fi
	3078	fi
	3079
	3080	else
	3081
	3082	# TRANSFER INNERHALB DIESES JOBS
	3083	transfer_failed=false
[82]	3084	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3085	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3086	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3087	[[ $? != 0 ]] && transfer_failed=true
[1]	3088
	3089	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3090	# LOKALER MASCHINE ANLEGEN
	3091	if [[ $transfer_failed = true ]]
	3092	then
	3093	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3094	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3095
	3096	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3097	# ANLEGEN
	3098	eval local_catalog=${pathout[$i]}
	3099	if [[ ! -d $local_catalog ]]
	3100	then
	3101	printf " *** local directory does not exist. Trying to create:\n"
	3102	printf " $local_catalog \n"
	3103	mkdir -p $local_catalog
	3104	fi
	3105
	3106	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3107	transfer_problems=true
	3108	fi
	3109	fi
	3110	else
	3111
	3112	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3113	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3114	actionout[$i]=a
	3115	fi
	3116	fi
	3117
	3118
	3119	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3120	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3121	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3122	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3123	if [[ "${actionout[$i]}" = fl ]]
	3124	then
	3125	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3126	chmod g+rx $tmp_data_catalog
	3127	if [[ $files_for_pes = false ]]
	3128	then
	3129	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3130	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3131	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3132	else
	3133	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3134	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3135	mkdir $tmp_data_catalog/${frelout[$i]}
[149]	3136	cd ${localout[$i]}
	3137	for file in $(ls *)
	3138	do
	3139	ln -f $file $tmp_data_catalog/${frelout[$i]}
	3140	done
	3141	cd $TEMPDIR
[1]	3142	fi
	3143
	3144
	3145	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3146	if [[ $store_on_archive_system = true ]]
	3147	then
	3148
	3149	if [[ $archive_system = asterix ]]
	3150	then
	3151	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3152	if [[ $files_for_pes = false ]]
	3153	then
	3154	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3155	else
	3156	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3157	fi
	3158	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3159	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3160	echo "then" >> archive_${frelout[$i]}
	3161	echo " do_stageout=false" >> archive_${frelout[$i]}
	3162	echo "else" >> archive_${frelout[$i]}
	3163	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3164	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3165	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3166	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3167	if [[ $files_for_pes = false ]]
	3168	then
	3169	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3170	else
	3171	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3172	fi
	3173	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3174	echo "fi" >> archive_${frelout[$i]}
	3175	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3176	elif [[ $archive_system = DMF ]]
	3177	then
	3178	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3179	if [[ $files_for_pes = false ]]
	3180	then
	3181	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3182	locat=DMF
	3183	exit
	3184	else
	3185	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3186	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3187	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3188	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3189	fi
	3190	elif [[ $archive_system = tivoli ]]
	3191	then
	3192	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3193	if [[ $files_for_pes = false ]]
	3194	then
	3195	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3196	echo "set -x" >> archive_${frelout[$i]}
	3197	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3198	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3199	else
	3200
	3201	echo "set -x" >> archive_${frelout[$i]}
	3202	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3203	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3204	cd $tmp_data_catalog
	3205	all_files=`ls -1 ${frelout[$i]}/*`
	3206	cd - > /dev/null
	3207	(( inode = 0 ))
	3208	(( tp1 = tasks_per_node + 1 ))
	3209	while (( inode < nodes ))
	3210	do
	3211	# echo "*** all_files = \"$all_files\" "
	3212	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3213	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3214	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3215	# echo "*** files = \"$files\" "
	3216	# echo "*** all_files = \"$all_files\" "
	3217	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3218	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3219	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3220	(( inode = inode + 1 ))
	3221	done
	3222	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3223	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3224	fi
	3225	elif [[ $archive_system = ut ]]
	3226	then
	3227	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3228	if [[ $files_for_pes = false ]]
	3229	then
	3230	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3231	echo "set -x" >> archive_${frelout[$i]}
	3232	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3233	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3234	else
	3235
	3236	echo "set -x" >> archive_${frelout[$i]}
	3237	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3238	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3239	cd $tmp_data_catalog
	3240	all_files=`ls -1 ${frelout[$i]}/*`
	3241	cd - > /dev/null
	3242	(( inode = 0 ))
	3243	(( tp1 = tasks_per_node + 1 ))
	3244	while (( inode < nodes ))
	3245	do
	3246	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3247	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3248	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3249	(( inode = inode + 1 ))
	3250	done
	3251	fi
	3252	elif [[ $archive_system = none ]]
	3253	then
	3254	printf " +++ archiving on $localhost not available!\n"
	3255	fi
	3256
	3257	if [[ $archive_system != none ]]
	3258	then
	3259	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3260	then
[164]	3261	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
	3262	subjob -v -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3263	elif [[ $localhost = nech ]]
	3264	then
[82]	3265	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3266	fi
	3267	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3268	fi
	3269	else
	3270	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3271	fi
	3272
	3273
	3274	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3275	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3276	if [[ $files_for_pes = false ]]
	3277	then
	3278	cat /dev/null > ${pathout[$i]}
	3279	else
	3280	mkdir -p ${pathout[$i]}
	3281	fi
	3282
	3283	fi
	3284
	3285
	3286	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3287	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3288	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3289	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3290	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3291	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3292	if [[ "${actionout[$i]}" = ar ]]
	3293	then
	3294	if [[ $files_for_pes = false ]]
	3295	then
	3296	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3297	printf "\n ${pathout[$i]}"
	3298	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3299	else
	3300	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3301	printf "\n ${pathout[$i]}"
	3302	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3303	fi
	3304	mv ${localout[$i]} ${frelout[$i]}
	3305
	3306	file_saved=false
	3307
	3308	if [[ $archive_system = asterix ]]
	3309	then
	3310	do_stageout=true
	3311	(( stageout_anz = 0 ))
	3312	while [[ $do_stageout = true ]]
	3313	do
	3314	if [[ $files_for_pes = false ]]
	3315	then
	3316	stageout ${frelout[$i]} > STAGE_OUTPUT
	3317	else
	3318	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3319	fi
	3320	cat STAGE_OUTPUT
	3321	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3322	then
	3323	file_saved=true
	3324	do_stageout=false
	3325	else
	3326	if [[ $files_for_pes = false ]]
	3327	then
	3328	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3329	else
	3330	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3331	fi
	3332	(( stageout_anz = stageout_anz + 1 ))
	3333	if (( stageout_anz == 10 ))
	3334	then
	3335	printf "\n +++ stoped after 10 unsuccessful tries!"
	3336	archive_save=false
	3337	do_stageout=false
	3338	else
	3339	printf "\n *** new try to store on archive after 15 min:"
	3340	sleep 900
	3341	fi
	3342	fi
	3343	done
	3344	elif [[ $archive_system = DMF ]]
	3345	then
	3346	if [[ $files_for_pes = false ]]
	3347	then
	3348	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3349	locat=DMF
	3350	exit
	3351	else
	3352	rm -rf $ARCHIVE/${frelout[$i]}
	3353	cp -r ${frelout[$i]} $ARCHIVE
	3354	fi
	3355	file_saved=true
	3356	elif [[ $archive_system = tivoli ]]
	3357	then
	3358	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3359	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3360	# GELEGT WERDEN
	3361	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3362	chmod g+rx $tmp_data_catalog
	3363	if [[ $files_for_pes = false ]]
	3364	then
	3365	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3366	else
	3367	mkdir $tmp_data_catalog/${frelout[$i]}
	3368	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3369	fi
	3370
	3371	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3372	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3373	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3374	if [[ $files_for_pes = false ]]
	3375	then
	3376	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3377	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3378	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3379	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3380	else
	3381	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3382	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3383	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3384	fi
	3385
[164]	3386	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 -c $job_catalog archive_${frelout[$i]}
[1]	3387	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3388	file_saved=true
	3389
	3390	elif [[ $archive_system = ut ]]
	3391	then
	3392	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3393	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3394	# GELEGT WERDEN
	3395	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3396	chmod g+rx $tmp_data_catalog
	3397	if [[ $files_for_pes = false ]]
	3398	then
	3399	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3400	else
	3401	mkdir $tmp_data_catalog/${frelout[$i]}
	3402	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3403	fi
	3404
	3405	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3406	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3407	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3408	if [[ $files_for_pes = false ]]
	3409	then
	3410	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3411	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3412	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3413	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3414	else
	3415	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3416	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3417	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3418	fi
	3419
[82]	3420	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3421	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3422	file_saved=true
	3423
	3424	else
	3425	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3426	archive_save=false
	3427	fi
	3428	if [[ $file_saved = true ]]
	3429	then
	3430	if [[ $files_for_pes = false ]]
	3431	then
	3432	cat /dev/null > ${pathout[$i]}
	3433	else
	3434	mkdir -p ${pathout[$i]}
	3435	fi
	3436	fi
	3437	fi
	3438
	3439	# APPEND AUF LOKALER MASCHINE
	3440	if [[ "${actionout[$i]}" = "a" ]]
	3441	then
	3442	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3443	cat ${localout[$i]} >> ${pathout[$i]}
	3444	fi
	3445
	3446	# KOPIEREN AUF LOKALER MASCHINE
	3447	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3448	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3449	then
	3450
	3451	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3452	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3453	then
	3454	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
[149]	3455	if [[ $link_local_output = true ]]
	3456	then
	3457	printf " using ln -f\n"
	3458	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3459	fi
	3460	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3461	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
	3462	then
	3463	if [[ $link_local_output = true ]]
	3464	then
	3465	printf " ln failed, using cp...\n"
	3466	fi
	3467	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3468	fi
[1]	3469	else
	3470	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
[149]	3471	if [[ $link_local_output = true ]]
	3472	then
	3473	printf " using ln -f\n"
	3474	ln -f ${localout[$i]} ${pathout[$i]}
	3475	fi
	3476	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3477	if [[ ! -f "${pathout[$i]}" ]]
	3478	then
	3479	if [[ $link_local_output = true ]]
	3480	then
	3481	printf " ln failed, using cp...\n"
	3482	fi
	3483	cp ${localout[$i]} ${pathout[$i]}
	3484	fi
[1]	3485	fi
	3486
	3487	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3488	then
	3489
	3490	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3491	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3492	# WIRD DANN KOPIERT
	3493	# PER MOVE UMBENANNT WERDEN
	3494	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
[149]	3495	if [[ $link_local_output = true ]]
	3496	then
	3497	printf " using ln -f\n"
	3498	mkdir ${pathout[$i]}
	3499	cd ${localout[$i]}
	3500	for file in $(ls *)
	3501	do
	3502	ln -f $file ${pathout[$i]}
	3503	done
	3504	cd $TEMPDIR
	3505	fi
	3506	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
	3507	if [[ ! -f "${pathout[$i]}/_0000" ]]
	3508	then
	3509	if [[ $link_local_output = true ]]
	3510	then
	3511	printf " ln failed for .../_0000, using cp...\n"
	3512	fi
	3513	cp -r ${localout[$i]} ${pathout[$i]}
	3514	fi
[1]	3515
	3516	fi
	3517	fi
	3518	done
	3519	if (( i != 0 ))
	3520	then
	3521	if [[ $transfer_problems = true ]]
	3522	then
	3523	printf "\n$striche\n *** OUTPUT-files saved"
	3524	printf "\n +++ WARNING: some data transfers failed! \n"
	3525	else
	3526	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3527	fi
	3528	fi
	3529
	3530
	3531	# EVENTUELL FOLGEJOB STARTEN
	3532	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3533	if [[ -f CONTINUE_RUN ]]
	3534	then
	3535
	3536	if [[ $archive_save = true ]]
	3537	then
	3538
	3539	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3540	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3541	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3542	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3543	# HANDEN
	3544	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3545	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3546	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3547	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3548	then
	3549	mc=`echo $mc \| sed 's/#/f/g'`
	3550	fi
	3551
	3552
	3553	# JOB STARTEN
	3554	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3555	echo " $mc"
	3556	printf "\n$striche\n"
	3557	if [[ $localhost != $fromhost ]]
	3558	then
	3559
	3560	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
	3561	then
	3562	echo "*** ssh will be used to initiate restart-runs!"
	3563	echo " return_addres=\"$return_addres\" "
	3564	echo " return_username=\"$return_username\" "
	3565	if [[ $return_addres = 172.20.25.41 ]]
	3566	then
	3567	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3568	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3569	else
[33]	3570	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3571	fi
	3572	else
	3573	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3574	locat=restart; exit
	3575	fi
	3576
	3577	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3578	# DER AKTUELLE JOB ENDET
	3579	sleep 30
	3580
	3581	else
	3582
	3583	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
[108]	3584	# RUFEN WERDEN, AUSSER AUF lcfimm
[1]	3585	cd $LOCAL_PWD
[108]	3586	if [[ $localhost = lcfimm ]]
	3587	then
	3588	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
	3589	else
	3590	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	3591	fi
[1]	3592	cd - > /dev/null
	3593	fi
	3594	printf "\n$striche\n *** restart-run initiated \n"
	3595
	3596
	3597	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	3598	# GEHOLT WORDEN SIND, LOESCHEN
	3599	(( i = 0 ))
	3600	while (( i < iin ))
	3601	do
	3602	(( i = i + 1 ))
	3603	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	3604	then
	3605	rm -r $tmp_data_catalog/${frelin[$i]}
	3606	fi
	3607	done
	3608
	3609	else
	3610
	3611	printf "\n +++ no restart-run possible, since errors occured"
	3612	printf "\n during the archive process"
	3613	fi
	3614
	3615	fi
	3616
	3617
	3618
	3619	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	3620	if [[ "$email_notification" != "" ]]
	3621	then
	3622
	3623	if [[ $localhost != $fromhost ]]
	3624	then
	3625	if [[ -f CONTINUE_RUN ]]
	3626	then
	3627	echo "PALM restart run necessary" > email_text
	3628	echo "description header of actual run:" >> email_text
	3629	cat CONTINUE_RUN >> email_text
	3630	echo "mrun-command to restart:" >> email_text
	3631	echo "$mc" >> email_text
	3632	else
	3633	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	3634	fi
	3635	mail $email_notification < email_text
	3636	printf "\n *** email notification sent to \"$email_notification\" "
	3637	fi
	3638	fi
	3639
	3640
	3641
	3642	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	3643	cd $HOME
	3644	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	3645
	3646	else
	3647
	3648
	3649	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	3650	# CHENDE AKTIONEN DURCHGEFUEHRT
	3651
	3652	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	3653	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	3654	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	3655	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[123]	3656	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
[1]	3657	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	3658	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	3659	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	3660	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	3661	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	3662	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	3663	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	3664	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	3665	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	3666	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	3667	if [[ $use_openmp = true ]]
	3668	then
	3669	mrun_com=${mrun_com}" -O"
	3670	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	3671	else
	3672	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	3673	fi
	3674	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	3675	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	3676	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	3677	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
[127]	3678	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
[102]	3679	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
[1]	3680	if [[ $do_remote = true ]]
	3681	then
	3682	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	3683	fi
	3684
	3685
	3686	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	3687	jobfile=jobfile.$RANDOM
	3688
	3689
	3690	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	3691	echo "mkdir $TEMPDIR" >> $jobfile
	3692	echo "cd $TEMPDIR" >> $jobfile
	3693
	3694
	3695	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	3696	if [[ $do_trace = true ]]
	3697	then
	3698	echo "set -x" >> $jobfile
	3699	else
	3700	echo "set +vx" >> $jobfile
	3701	fi
	3702
	3703
	3704	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	3705	# SOWIE GEGEBENENFALLS DES MAKEFILES
	3706	if [[ $do_compile = true ]]
	3707	then
	3708
	3709	source_catalog=SOURCES_FOR_RUN_$fname
	3710
	3711	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	3712	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	3713	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	3714	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	3715	echo "export SOURCES_COMPLETE=true" >> $jobfile
	3716	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	3717
	3718	for filename in $source_list
	3719	do
	3720	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3721	echo "cat > $filename << \"%END%\"" >> $jobfile
	3722	cat $source_catalog/$filename >> $jobfile
	3723	echo " " >> $jobfile
	3724	echo "%END%" >> $jobfile
	3725	echo " " >> $jobfile
	3726	done
	3727
[82]	3728	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3729	echo "cat > Makefile << \"%END%\"" >> $jobfile
	3730	cat $source_catalog/Makefile >> $jobfile
	3731	echo " " >> $jobfile
	3732	echo "%END%" >> $jobfile
	3733	echo " " >> $jobfile
[1]	3734
	3735	echo "cd - > /dev/null" >> $jobfile
	3736
	3737	fi
	3738
	3739
	3740	# ABSPEICHERN DER KONFIGURATIONSDATEI
	3741	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3742	echo "cat > $config_file << \"%END%\"" >> $jobfile
	3743	cat $config_file >> $jobfile
	3744	echo "%END%" >> $jobfile
	3745	echo " " >> $jobfile
	3746
	3747
	3748	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	3749	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3750	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
[22]	3751	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
[1]	3752	echo "%END%" >> $jobfile
	3753	if [[ $host = lctit ]]
	3754	then
	3755	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	3756	echo "mv mrun_new $mrun_script_name" >> $jobfile
	3757	fi
	3758	echo "chmod u+x $mrun_script_name" >> $jobfile
	3759	echo "execute_mrun=true" >> $jobfile
	3760	echo " " >> $jobfile
	3761
	3762	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	3763	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	3764	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	3765	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	3766	if [[ $do_remote = true ]]
	3767	then
	3768	(( i = 0 ))
	3769	while (( i < iin ))
	3770	do
	3771	(( i = i + 1 ))
	3772	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	3773	if [[ "${transin[$i]}" = job ]]
	3774	then
	3775	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	3776	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	3777	echo " " >> $jobfile
	3778	echo "%END%" >> $jobfile
	3779	else
[82]	3780	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	3781	fi
	3782
	3783	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	3784	echo "if [[ \$? = 1 ]]" >> $jobfile
	3785	echo "then" >> $jobfile
	3786	echo " echo \" \" " >> $jobfile
	3787	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	3788	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	3789	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	3790	echo " execute_mrun=false" >> $jobfile
	3791	echo "fi" >> $jobfile
	3792	done
	3793	fi
	3794
	3795	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	3796	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	3797	echo "LOCAL_PWD=$working_directory" >> $jobfile
	3798	echo "export LOCAL_PWD" >> $jobfile
	3799
	3800	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	3801	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	3802	echo "export LOCAL_MRUN_PATH" >> $jobfile
	3803
[66]	3804	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	3805	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	3806	then
	3807	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	3808	fi
[1]	3809
	3810	# MRUN AUF ZIELRECHNER AUFRUFEN
	3811	echo "set -x" >> $jobfile
	3812	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	3813
	3814	echo 'ls -al; echo `pwd`' >> $jobfile
	3815	echo "cd \$HOME" >> $jobfile
	3816	echo "rm -rf $TEMPDIR" >> $jobfile
	3817
	3818
	3819
	3820
	3821	# JOB PER SUBJOB STARTEN
	3822	if [[ $silent = false ]]
	3823	then
	3824	printf "\n "
	3825	else
	3826	printf "\n\n"
	3827	fi
	3828
[164]	3829	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v -c $job_catalog $jobfile
[1]	3830	rm -rf $jobfile
	3831
	3832
	3833	fi # ENDE REMOTE-TEIL
	3834
	3835
	3836
	3837	# ENDE DER PROZEDUR

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