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source: palm/trunk/SCRIPTS/mrun @ 162

Last change on this file since 162 was 149, checked in by letzel, 17 years ago

Modifications of mrun concerning hard links:

link of restart files with long file name possible
If environment variable link_local_output is set to true, mrun tries "ln -f" on local output and resorts to "cp" or "cp -r" on error

Property svn:keywords set to Rev

File size: 141.7 KB

Rev	Line
[71]	1	#!/bin/ksh
[66]	2	# mrun - Plot-Shellskript
	3	# $Id: mrun 61 2007-03-12 05:42:06Z raasch $
[1]	4
	5	# Prozedur zum Starten von Modellaeufen
	6
	7	# letzte Aenderung:
	8	# 03/03/94 - Siggi - Entwicklungsbeginn
	9	# 21/03/94 - Siggi - Entwicklungsabschluss (Version 1.0)
	10	# 09/12/94 - Siggi - allexport unterbunden; statt dessen werden jetzt ein-
	11	# zelne Variable exportiert. Dies ist noetig, weil an-
	12	# sonsten irgendein Speicher ueberlaeuft und von mrun
	13	# aufgerufene Programme (z.B. stageout) mit Fehlern
	14	# abbrechen (too many arguments)
	15	# 20/06/95 - Siggi - noclobber muss explizit abgeschaltet, da jetzt
	16	# defaultmaessig im RRZN-Profile eingeschaltet
	17	# 10/06/97 - Siggi - Zusaetzliche Option -C bei cpp, damit // nicht
	18	# wegfallen
	19	# 25/04/00 - Siggi - Version 1.5
	20	# remote_addres und remote_user in return_addres bzw.
	21	# return_username umbenannt, return_username wird dem
	22	# mrun-Aufruf im Job ueber Option -U mitgegeben.
	23	# Neue Variable remote_username, die beim interaktiven
	24	# mrun-Aufruf zwingend ueber die neue Option -u oder
	25	# in der Konfigurationsdatei angegeben werden muss.
	26	# 08/02/01 - Siggi - Alle mrun-Meldungen ins englische uebersetzt,
	27	# Version 1.7
	28	# 05/05/02 - Siggi - Uebersetzungen mittels make-Mechanismus moeglich
	29	# 21/11/02 - Siggi - ENV-Variable XLFRTEOPTS wird vor Ausfuehrung auf
	30	# IBM gesetzt, um Record-Laenge der NAMELIST-Dateien,
	31	# zu bestimmen; Praeprozessoroptionen haben nun alle
	32	# die Form -Dtext=text, weil auf IBM sonst text durch
	33	# die leere Zeichenkette ersetzt wird
	34	# 01/08/03 - Siggi - Test of implementing dvrp+1PE on ibm
	35	# 07/01/04 - Siggi - additional preprocessor directive for ibm included
	36	# (-D$OMP=OMP) in order to avoid problems with
	37	# OMP_NUM_THREADS
	38	# 04/01/05 - Siggi - archiving on hanni and berni is done in separate
	39	# tar files, one for each node used
	40	# 07/01/04 - Siggi - old code for t3e, vpp and hpcs eliminated
	41	# 09/01/05 - Siggi - workaround for getting the IP address on gfdl3
	42	# 17/01/05 - Siggi - job for data transfer to local machine now within
	43	# job class c1 (HLRN)
	44	# 27/01/05 - Siggi - IP address workaround for gfdl3 removed
	45	# 28/01/05 - Siggi - tar-filenames on $PERM (HLRN) now include the
	46	# base filename and cycle number
	47	# 16/02/05 - Gerald - hababai validated
	48	# 14/03/05 - Siggi - abort on NEC after first runtime error (F_ERRCNT)
	49	# 29/03/05 - Marcus - berni*-en0 validated
	50	# 21/04/05 - Siggi - transfer-job-protocol for avs-data is no more stored
	51	# 24/04/05 - Siggi - netcdf support on lcmuk
	52	# 25/04/05 - Siggi - netcdf support on gfld3 (decalpha)
	53	# 11/05/05 - Siggi - files with non-numeric extensions (.xxx after cycle
	54	# number) can now be used within interactive runs
	55	# 12/05/05 - Siggi - netcdf support on ibm
	56	# 13/05/05 - Siggi - error in tar-filenames on $PERM (HLRN) removed
	57	# 18/05/05 - Siggi - netcdf support on nec
	58	# 24/05/05 - Siggi - netcdf support on ibms
	59	# 14/06/05 - Siggi - sleep interval after submit of restart job increased
	60	# to 30 seconds
	61	# 28/06/05 - Siggi - bora adjusted to new intel compiler (LD_LIBRARY_
	62	# PATH is temporarily set)
	63	# 07/09/05 - Siggi - setting of MP_EAGER_LIMIT switched off because it
	64	# caused warnings in the job protocol
	65	# 20/10/05 - Siggi - update of netcdf-version on decalpha (gfdl3)
	66	# 25/10/05 - Siggi - error in listing files for getting the cycle number
	67	# removed
	68	# 26/10/05 - Siggi - new paths for dvrp-library, transfer of catalogs
	69	# realized by file attribute trpe
	70	# 28/10/05 - Siggi - if existing, the file extension is output in case
	71	# of missing input file - no job abort in case of
	72	# missing input files with file extensions
	73	# (preliminary solution)
	74	# 31/10/05 - Siggi - data transfer from nech now within seperate job
	75	# 04/11/05 - Siggi - netcdf 3.6.0-p1 on ibmh/ibmb
	76	# 07/12/05 - Siggi - gallego and elephanta admitted
	77	# 30/12/05 - Siggi - gfdl5 (ibmy) admitted
	78	# 10/01/06 - Siggi - cpp directive for NetCDF 64bit support
	79	# 20/01/06 - Siggi - cpp directive for ibmy
	80	# 09/02/06 - Siggi - ibmy admitted for batch mode
	81	# 13/04/06 - Siggi - ostria admitted
	82	# 18/04/06 - Siggi - usage of OpenMP implemented (additional option -O)
	83	# 10/05/06 - Siggi - environment variable XLSMPOPTS set on IBM for
	84	# optimization of OpenMP runs (option stacksize is
	85	# necessary for large gridpoint numbers because
	86	# otherwise a segmentation fault occurs)
	87	# 23/05/05 - Siggi - lctit (SUN Fire X4600) admitted
	88	# 21/08/06 - Siggi - standard mrun path on scirocco is as on bora
	89	# 23/08/06 - Siggi - netcdf support for scirocco (notebook)
	90	# 20/09/06 - Marcus - add DVRP library on nech
	91	# 24/10/06 - Siggi - Environment variables for PALM steering are written
	92	# on local NAMELIST file ENVPAR
	93	# 24/11/06 - Siggi - levanto admitted, maestro switched to ifc 9.1
	94	# 28/11/06 - Siggi - call to interpret_config.x_levanto because of SuSe 10
	95	# 06/02/07 - Siggi - add DVRP library on lcmuk
	96	# 07/02/07 - Siggi - revision of source code handling, source code is
	97	# now expected in directory given by source_path and
	98	# not in the current working directory, source code
	99	# files provided in add_source_path are allways
	100	# compiled, source code to be compiled is allways
	101	# sampled in SOURCES_FOR_RUN_$fname which is a
	102	# subdirectory of the current working directory,
[5]	103	# -s TEST changed to -s WRITE_PERMIT or -s WP,
[1]	104	# adapted for RIAM (neck)
[5]	105	# bugfix for cycle number of output file (extout)
	106	# all hpmuk-related code removed
[14]	107	# 14/02/07 - Siggi - dvrp support for neck added
[21]	108	# 28/02/07 - Siggi - empty lines in configuration file are accepted
[26]	109	# mrun_path replaced by PALM_BIN,
	110	# all machines are calling interpret_config.x
[66]	111	# 14/03/07 - Siggi - fimm admitted, revision number added to terminal
	112	# output
[69]	113	# 16/03/07 - Siggi - adjustments for lctit
[78]	114	# 29/03/07 - Siggi - global revision transfered to batch job by new
	115	# option -G
[82]	116	# 30/03/07 - Siggi - compilation "by hand" removed, cpp-directives/options
	117	# + netcdf/dvrp-options are read from configuration
	118	# file, host identifier (local_host) is read from
	119	# config file, code related to ftp filetransfer
	120	# removed (incl. option -f)
[97]	121	# 19/06/07 - Siggi - time limit for cdata jobs increased
[102]	122	# 25/07/07 - Siggi - two sets of executables can be started on lcmuk,
	123	# if new option -Y (coupling) is given,
	124	# output of executables to aout_output removed,
	125	# messages are immediately written to stdout instead
[108]	126	# 03/08/07 - Marcus - add XOPT="-X $numprocs" for lcfimm
	127	# 09/08/07 - Marcus - workaround on lcfimm to propagate environment
	128	# variables out to the nodes in coupled mode -disabled-
	129	# 13/08/07 - Marcus - start local restart jobs per ssh on lcfimm
[109]	130	# 28/08/07 - Marcus - completely remove workaround on lcfimm to propagate
	131	# environment variables out to the nodes in coupled mode
[118]	132	# 15/10/07 - Siggi - Preliminary adjustments for lctit, based on Jin's
	133	# suggestions
[122]	134	# 19/10/07 - Marcus - further adjustments for lctit: add new optional
	135	# argument -g group_number, admit all sla* node_usage
	136	# queues
[129]	137	# 30/10/07 - Marcus - further adjustments for queues on lctit
[149]	138	# 14/02/08 - Bjoern - link of restart files with long file name possible
	139	# 28/02/08 - Marcus - If environment variable link_local_output is set to
	140	# true, mrun tries "ln -f" on local output and resorts
	141	# to "cp" or "cp -r" on error
[1]	142
	143	# VARIABLENVEREINBARUNGEN + DEFAULTWERTE
	144
	145	set +o allexport # SICHERHEITSHALBER UNTERBINDEN, DA SONST EVTL. STAGEOUT
	146	# NICHT LAUEFT (TOO MANY ARGUMENTS - PROBLEM)
	147	set +o noclobber # EXISTIERENDE DATEIEN DUERFEN UEBERSCHRIEBEN WERDEN
	148
	149	AddFilenames=""
	150	additional_conditions=""
	151	add_source_path=""
	152	afname=""
	153	archive_save=true
	154	archive_system=none
	155	compiler_name=""
	156	cond1=""
	157	cond2=""
	158	config_file=.mrun.config
	159	cpp_opts=""
[82]	160	cpp_options=""
[1]	161	cpumax=0
	162	cpurest=0
	163	delete_temporary_catalog=true
	164	do_batch=false
	165	do_compile=true
	166	do_remote=false
	167	do_stagein=true
	168	do_stageout=true
	169	do_trace=false
	170	email_notification=""
	171	exclude=""
	172	executable=""
	173	execution_error=false
[67]	174	fimm=false
[1]	175	fname=test
	176	fromhost=""
[78]	177	global_revision=""
[122]	178	group_number=none
[1]	179	host=""
	180	host_file=""
	181	hp=""
	182	ignore_archive_error=false
	183	input_list=""
	184	interpreted_config_file=""
	185	job_on_file=""
	186	keep_data_from_previous_run=false
[149]	187	link_local_output=false
[1]	188	localhost_realname=$(hostname)
	189	local_compile=false
	190	locat=normal
	191	mainprog=""
	192	makefile=""
	193	mc=$0
	194	while [[ $(echo $mc \| grep -c "/") != 0 ]]
	195	do
	196	mc=`echo $mc \| cut -f2- -d"/"`
	197	done
	198	module_files=""
	199	mrun_script_name=$mc
[82]	200	netcdf_inc=""
	201	netcdf_lib=""
[1]	202	netcdf_support=false
	203	node_usage=default
	204	numprocs=""
	205	OOPT=""
	206	openmp=false
	207	output_list=""
	208	package_list=""
	209	punkte="..........................................................."
	210	queue=none
	211	read_from_config=""
[5]	212	restart_run=false
[146]	213	return_addres=$(nslookup `hostname` 2>&1 \| grep "Address:" \| tail -1 \| awk '{print $2}')
[1]	214	if [[ $return_addres = 130.75.105.158 ]]
	215	then
	216	return_addres=172.20.25.41
	217	echo "+++ WARNING: return_addres changed to $return_addres !!!!!"
	218	fi
	219	# if [[ $return_addres = 210.117.65.1 ]]
	220	# if [[ $(nslookup `hostname` 2>&1 \| grep -c 210.117.65.1) = 1 ]]
	221	# then
	222	# [[ $localhost_realname = gfdl3.yonsei.ac.kr ]] && return_addres=165.132.26.56
	223	# fi
	224	return_password=""
	225	return_username=$LOGNAME
	226	remotecall=false
	227	remote_username=""
[102]	228	run_coupled_model=false
[1]	229	run_mode=""
	230	scirocco=false
	231	store_on_archive_system=true
	232	striche=" ----------------------------------------------------------------------------"
	233	silent=false
	234	source_list=""
	235	source_path=SOURCE
	236	tasks_per_node=""
	237	threads_per_task=1
	238	tmpcreate=false
	239	tmp_data_catalog=""
	240	transfer_problems=false
	241	usern=$LOGNAME
	242	working_directory=`pwd`
	243	TOPT=""
	244	XOPT=""
	245	zeit=$( date \| cut -c 12-19 )
	246
	247	typeset -i iec=0 iic=0 iin=0 ioc=0 iout=0 memory=0 stagein_anz=0 stageout_anz=0
[102]	248	typeset -i cputime i ii iii icycle inode ival jobges jobsek maxcycle minuten nodes pes sekunden tp1
[1]	249
[66]	250	typeset -R30 calltime
[1]	251	typeset -L20 spalte1
	252	typeset -L40 spalte2
	253	typeset -L60 spalte3
	254	typeset -L35 string1=`date`
	255	typeset -L12 string2=$usern
	256	typeset -L12 string3=$localhost_realname
	257	typeset -L12 string4
	258	typeset -L12 string5
[67]	259	typeset -L30 version="MRUN 2.0 Rev$Rev: 149 $"
[1]	260
	261
	262
	263	# EINZELNE VARIABLE FUER HAUPTPROGRAMM EXPORTIEREN
	264	export cpurest fname host localhost return_addres return_username remotecall tasks_per_node
	265
	266	# FOLGENDE VARIABLEN MUESSEN FUER DIE INTERPRETATION DER KONFIGURATIONSDATEI
	267	# EXPORTIERT WERDEN
	268	export afname config_file cpp_opts cpumax do_batch do_trace fname fromhost
[127]	269	export group_number input_list memory numprocs output_list queue run_mode
[1]	270
	271
	272
	273	# FEHLERBEHANDLUNG
	274	# BEI EXIT:
[83]	275	trap 'rm -rf $working_directory/tmp_mrun
[69]	276	if [[ $locat != localhost ]]
[1]	277	then
[22]	278	# if [[ ! -f ${mrun_path}/statistik/mrun_statistik ]]
	279	# then
	280	# cat > ${mrun_path}/statistik/mrun_statistik << %STATEND%
	281	#MRUN-calls on $localhost
	282	#
	283	#date and time user localhost remotehost termination mrun-command
	284	#--------------------------------------------------------------------------------------------------------------------
	285	#%STATEND%
	286	# chmod 666 ${mrun_path}/statistik/mrun_statistik
	287	# fi
	288	#
	289	# # EINTRAG IN DIE STATISTIK-DATEI
	290	# string4=$host
	291	# string5=$locat
	292	# if [[ "$job_on_file" = "" && $locat != control_c && $locat != user_abort ]]
	293	# then
	294	# if [[ $do_batch = true ]]
	295	# then
	296	# printf "$string1$string2$string3$string4$string5$mrun_com \n" >> ${mrun_path}/statistik/mrun_statistik
	297	# else
	298	# printf "$string1$string2$string3$string4$string5$mc \n" >> ${mrun_path}/statistik/mrun_statistik
	299	# fi
	300	# fi
[69]	301	echo " " > /dev/null
[1]	302	fi
	303
	304	if [[ $locat != normal && $locat != control_c && $locat != local_compile ]]
	305	then
	306
	307	# EVENTUELLE ERROR-KOMMANDOS ABARBEITEN
	308	(( i = 0 ))
	309	while (( i < iec ))
	310	do
	311	(( i = i + 1 ))
	312	printf "\n *** Execution of ERROR-command:\n"
	313	printf " >>> ${err_command[$i]}\n"
	314	eval ${err_command[$i]}
	315	done
	316	if [[ -n $interpreted_config_file ]] then
	317	rm -rf $interpreted_config_file
	318	fi
[71]	319	if [[ -n .mrun_environment ]] then
	320	rm -rf .mrun_environment
	321	fi
[1]	322	if [[ $tmpcreate = true ]]
	323	then
	324	printf "\n *** Contents of \"$TEMPDIR\":\n"
	325	ls -al; cd
	326	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	327	fi
	328	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	329	then
	330	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	331	fi
	332	printf "\n\n+++ MRUN killed \n\n"
	333	elif [[ $locat != control_c ]]
	334	then
	335	printf "\n\n --> all actions finished\n\n"
	336	printf " Bye, bye $usern !!\n\n"
	337	fi' exit
	338
	339
	340	# BEI TERMINAL-BREAK:
[83]	341	trap 'rm -rf $working_directory/tmp_mrun
[69]	342	[[ $tmpcreate = true ]] && (cd; rm -rf $TEMPDIR)
[1]	343	if [[ -f ~/job_queue/JOBINFO.$QSUB_REQID ]]
	344	then
	345	rm -rf ~/job_queue/JOBINFO.$QSUB_REQID
	346	fi
	347	printf "\n+++ MRUN killed by \"^C\" \n\n"
	348	locat=control_c
	349	exit
	350	' 2
	351
	352
[22]	353	# CHECK IF THE PATH FOR THE PALM BINARIES (SCRIPTS+UTILITY-PROGRAMS) HAS
	354	# BEEN SET
	355	if [[ "$PALM_BIN" = "" ]]
	356	then
	357	printf "\n +++ environment variable PALM_BIN has not been set"
	358	printf "\n please set it to the directory where the PALM scripts are located"
	359	locat=palm_bin; exit
	360	fi
	361
	362
[1]	363
	364	# SHELLSCRIPT-OPTIONEN EINLESEN UND KOMMANDO NEU ZUSAMMENSETZEN, FALLS ES
	365	# FUER FOLGEJOBS BENOETIGT WIRD
[122]	366	while getopts :a:AbBc:Cd:D:Fg:G:h:H:i:IkK:m:M:n:o:Op:P:q:r:R:s:St:T:u:U:vxX:Y option
[1]	367	do
	368	case $option in
	369	(a) afname=$OPTARG;;
	370	(A) store_on_archive_system=false; mc="$mc -A";;
	371	(b) do_batch=true; mc="$mc -b";;
	372	(B) delete_temporary_catalog=false; mc="$mc -B";;
	373	(c) config_file=$OPTARG; mc="$mc -c$OPTARG";;
[5]	374	(C) restart_run=true; mc="$mc -C";;
[1]	375	(d) fname=$OPTARG; mc="$mc -d$OPTARG";;
	376	(D) cpp_opts="$cpp_opts $OPTARG"; mc="$mc -D$OPTARG";;
[79]	377	(F) job_on_file="-D"; mc="$mc -F";;
[122]	378	(g) group_number=$OPTARG; mc="$mc -g$OPTARG";;
[78]	379	(G) global_revision=$OPTARG; mc="$mc -G'$OPTARG'";;
[1]	380	(h) host=$OPTARG; mc="$mc -h$OPTARG";;
	381	(H) fromhost=$OPTARG; mc="$mc -H$OPTARG";;
	382	(i) input_list=$OPTARG; mc="$mc -i'$OPTARG'";;
	383	(I) ignore_archive_error=true; mc="$mc -I";;
	384	(k) keep_data_from_previous_run=true; mc="$mc -k";;
	385	(K) additional_conditions="$OPTARG"; mc="$mc -K$OPTARG";;
	386	(m) memory=$OPTARG; mc="$mc -m$OPTARG";;
	387	(M) makefile=$OPTARG; mc="$mc -M$OPTARG";;
	388	(n) node_usage=$OPTARG; mc="$mc -n$OPTARG";;
	389	(o) output_list=$OPTARG; mc="$mc -o'$OPTARG'";;
	390	(O) use_openmp=true; mc="$mc -O";;
	391	(p) package_list=$OPTARG; mc="$mc -p'$OPTARG'";;
	392	(P) return_password=$OPTARG; mc="$mc -P$OPTARG";;
	393	(q) queue=$OPTARG; mc="$mc -q$OPTARG";;
	394	(r) run_mode=$OPTARG; mc="$mc -r'$OPTARG'";;
	395	(R) remotecall=true;return_addres=$OPTARG; mc="$mc -R$OPTARG";;
	396	(s) source_list=$OPTARG; mc="$mc -s'$OPTARG'";;
	397	(S) read_from_config=false; mc="$mc -S";;
	398	(t) cpumax=$OPTARG; mc="$mc -t$OPTARG";;
	399	(T) tasks_per_node=$OPTARG; mc="$mc -T$OPTARG";;
	400	(u) remote_username=$OPTARG; mc="$mc -u$OPTARG";;
	401	(U) return_username=$OPTARG; mc="$mc -U$OPTARG";;
	402	(v) silent=true; mc="$mc -v";;
	403	(x) do_trace=true;set -x; mc="$mc -x";;
	404	(X) numprocs=$OPTARG; mc="$mc -X$OPTARG";;
[102]	405	(Y) run_coupled_model=true; mc="$mc -Y";;
[1]	406	(\?) printf "\n +++ unknown option $OPTARG \n"
	407	printf "\n --> type \"$0 ?\" for available options \n"
	408	locat=parameter;exit;;
	409	esac
	410	done
	411
	412
	413	# EVTL. POSITIONSPARAMETER EINLESEN
	414	# ZUR ZEIT GIBT ES NUR DEN PARAMETER ? (=KURZINFO)
	415	shift OPTIND-1
	416
	417
	418	# KURZE AUFRUFBESCHREIBUNG WIRD HIER AUSGEGEBEN
	419	if [[ "$1" = "?" ]]
	420	then
	421	(printf "\n *** mrun can be called as follows:\n"
	422	printf "\n $mrun_script_name -b -c.. -d.. -D.. -f.. -F -h.. -i.. -I -K.. -m.. -o.. -p.. -r.. -R -s.. -t.. -T.. -v -x -X.. <modus>\n"
	423	printf "\n Description of available options:\n"
	424	printf "\n Option Description Default-Value"
	425	printf "\n -a base name of input files equiv. -d"
	426	printf "\n -A no archiving when using file-attribute fl"
	427	printf "\n -b batch-job on local machine ---"
	428	printf "\n -B do not delete temporary directory at end ---"
	429	printf "\n -c configuration file .mrun.config"
	430	printf "\n -d base name of files attached to program test"
	431	printf "\n -D preprocessor(cpp)-directives \"\" "
	432	printf "\n -F create remote job file only ---"
	433	printf "\n -h execution host $localhost_realname"
	434	printf "\n -i INPUT control list \"\" "
	435	printf "\n -I archiving errors of previous batch-jobs"
	436	printf "\n will be ignored"
	437	printf "\n -k keep data from previous run"
	438	printf "\n -K additional conditions for controling"
	439	printf "\n usage of conditional code and"
	440	printf "\n env-variables in configuration file \"\" "
	441	printf "\n -m memory demand in MB (batch-jobs) 0 MB"
	442	printf "\n -M Makefile name Makefile"
	443	printf "\n -n node usage (shared/not_shared) depending on -h"
	444	printf "\n -o OUTPUT control list \"\" "
	445	printf "\n -O use OpenMP ---"
	446	printf "\n -p software package list \"\" "
	447	printf "\n -q queue \"$queue\" "
	448	printf "\n -r run control list (combines -i -o) \"\" "
	449	printf "\n -s filenames of routines to be compiled \"\" "
	450	printf "\n must end with .f, .f90, .F, or .c !"
	451	printf "\n use \"..\" for more than one file and wildcards"
	452	printf "\n -s TEST compiles all files with w-permit"
	453	printf "\n -S config file interpreted by shellscript ---"
	454	printf "\n -t allowed cpu-time in seconds (batch) 0"
	455	printf "\n -T tasks per node depending on -h"
	456	printf "\n -u username on remote machine \"\" "
	457	printf "\n -v no prompt for confirmation ---"
	458	printf "\n -x tracing of mrun for debug purposes ---"
	459	printf "\n -X # of processors (on parallel machines) 1"
[102]	460	printf "\n -Y run coupled model ---"
[1]	461	printf "\n "
	462	printf "\n Possible values of positional parameter <modus>:"
	463	printf "\n \"?\" - this outline \n\n") \| more
	464	exit
	465	elif [[ "$1" != "" ]]
	466	then
	467	printf "\n +++ positional parameter $1 unknown \n"
	468	locat=parameter; exit
	469	fi
	470
	471
	472
	473	# KURZE STARTMELDUNG
	474	printf "\n*** $version "
	475	printf "\n will be executed. Please wait ..."
	476
	477
[82]	478
	479	# PRUEFEN, OB KONFIGURATIONS-DATEI VORHANDEN
	480	if [[ ! -f $config_file ]]
	481	then
	482	printf "\n\n +++ configuration file: "
	483	printf "\n $config_file"
	484	printf "\n does not exist"
	485	locat=connect; exit
	486	fi
	487
	488
	489	# HOST-IDENTIFIER (local_host) AUS KONFIGURATIONSDATEI BESTIMMEN
	490	line=""
	491	grep "%host_identifier" $config_file > tmp_mrun
	492	while read line
	493	do
	494	if [[ "$line" != "" \|\| $(echo $line \| cut -c1) != "#" ]]
	495	then
	496	HOSTNAME=`echo $line \| cut -d" " -s -f2`
	497	host_identifier=`echo $line \| cut -d" " -s -f3`
[83]	498	if [[ $localhost_realname = $HOSTNAME ]]
[82]	499	then
	500	localhost=$host_identifier
	501	break
	502	fi
	503	fi
	504	done < tmp_mrun
	505
	506	if [[ "$localhost" = "" ]]
	507	then
	508	printf "\n\n +++ no host identifier found in configuration file \"$config_file\""
	509	printf "\n for local host \"$localhost_realname\"."
	510	printf "\n Please add line"
	511	printf "\n \"\%host_identifier $localhost_realname <identifier>\""
	512	printf "\n to the configuration file."
	513	locat=localhost; exit
	514	fi
	515
	516
	517
	518	# HOSTSPEZIFISCHE VARIABLEN SETZEN
	519	case $localhost_realname in
	520	(breg-en0\|berni-en0) archive_system=tivoli;;
	521	(cs*) archive_system=ut;;
	522	(fimm.bccs.uib.no) fimm=true;;
	523	(gate\|n-sx) PATH=$PALM_BIN:$PATH:/usr/bin/nqsII;;
	524	(hreg-en0\|hanni-en0) archive_system=tivoli;;
	525	(scirocco) scirocco=true;;
	526	esac
	527
	528
	529
[1]	530	# BASISNAME DER INPUT-DATEIEN GLEICH ALLGEMEINEM BASISNAMEN SETZEN,
	531	# WENN NICHT VOM BENUTZER ANDERS BESTIMMT
	532	[[ "$afname" = "" ]] && afname=$fname
	533
	534
	535	# EVTL. RUN-MODUS DEN I/O-LISTEN HINZUFUEGEN
	536	if [[ "$run_mode" != "" ]]
	537	then
	538	input_list="$input_list $run_mode"
	539	output_list="$output_list $run_mode"
	540	fi
	541
	542
	543	# RECHNERNAMEN ABSPEICHERN, VON DEM AUS JOB GESTARTET WIRD,
	544	# ALLERDINGS NUR DANN, WENN NICHT PER OPTION -H BEREITS EIN WERT
	545	# ZUGEWIESEN WURDE (MRUN MACHT DIES IMMER, WENN ES SELBST BATCH-JOBS
	546	# STARTET)
	547	if [[ "$fromhost" = "" ]]
	548	then
	549	fromhost=$localhost
	550	fi
	551
	552
	553	# PRUEFEN, OB MRUN NUR TESTWEISE AUF DER LOKALEN MASCHINE KOMPILIEREN SOLL
	554	if [[ "$source_list" = LOCAL_COMPILE_TEST ]]
	555	then
	556	source_list=TEST
	557	local_compile=true
	558	host=$localhost
	559	fi
	560
	561
	562	# PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	563	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	564	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	565	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	566	if [[ -n $host && "$host" != $localhost ]]
	567	then
	568	do_batch=true
	569	do_remote=true
	570	case $host in
[5]	571	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|nech\|neck\|lctit\|unics) true;;
[1]	572	(*) printf "\n"
[83]	573	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	574	printf "\n is not available"
[1]	575	locat=nqs; (( iec = 0 )); exit;;
	576	esac
	577	else
	578	host=$localhost
	579	fi
	580
	581
	582	# ZUSATZBEDINGUNGEN (OPTION -K) AUSWERTEN
	583	if [[ -n $additional_conditions ]]
	584	then
[69]	585	# echo $additional_conditions \| cut -d" " -f1-3 \| read cond1 cond2 dummy
	586	cond1=`echo $additional_conditions \| cut -d" " -f1`
	587	cond2=`echo $additional_conditions \| cut -d" " -s -f2`
	588	dummy=`echo $additional_conditions \| cut -d" " -s -f3`
[1]	589	if [[ -n $dummy ]]
	590	then
	591	printf "\n +++ more than 2 additional conditions given for Option \"-K\""
	592	locat=options; exit
	593	fi
	594	fi
	595
	596
	597	# PRUEFEN, OB EVTL. BEI VORHERGEHENDEM LAUF (KETTENJOB) EINE
	598	# ARCHIVIERUNG FEHLGESCHLAGEN IST
	599	if [[ -f ~/job_queue/ARCHIVE_ERROR_$fname ]]
	600	then
	601	if [[ $ignore_archive_error = false ]]
	602	then
	603	printf "\n +++ data archiving of previous run failed"
	604	printf "\n see directory \~/job_queue on remote machine"
	605	locat=archive; exit
	606	else
	607	printf "\n +++ warning: data archiving in a previous run failed"
	608	printf "\n MRUN continues, trying to get backup copy"
	609	fi
	610	fi
	611
	612
	613
	614	# LESEN UND INTERPRETIEREN DER KONFIGURATIONS-DATEI VOM SHELLSCRIPT AUS
	615	# VORUEBERGEHEND ZWINGEND AUF LINUX-RECHNERN
	616	if [[ "$read_from_config" = false ]]
	617	then
	618
	619	[[ $silent = false ]] && printf "\n Reading the configuration file... "
	620	while read zeile
	621	do
	622	[[ $silent = false ]] && printf "."
	623
	624
	625	# ZUERST EVENTUELL VORKOMMENDE ENVIRONMENT-VARIABLEN DURCH IHRE WERTE
	626	# ERSETZEN
	627	eval zeile=\"$zeile\"
	628
	629
	630	# INTERPRETATION DER ZEILE
[21]	631	if [[ "$(echo $zeile)" = "" ]]
[1]	632	then
[21]	633	# LEERZEILE, KEINE AKTION
	634	continue
[1]	635
[21]	636	elif [[ "$(echo $zeile \| cut -c1)" = "#" ]]
	637	then
	638
[1]	639	# ZEILE IST KOMMENTARZEILE
	640	true
	641
	642	elif [[ "$(echo $zeile \| cut -c1)" = "%" ]]
	643	then
	644
	645	# ZEILE DEFINIERT ENVIRONMENT-VARIABLE
	646	zeile=$(echo $zeile \| cut -c2-)
[69]	647	# echo $zeile \| cut -d" " -f1-5 \| read var value for_host for_cond1 for_cond2
	648	var=`echo $zeile \| cut -d" " -f1`
	649	value=`echo $zeile \| cut -d" " -s -f2`
	650	for_host=`echo $zeile \| cut -d" " -s -f3`
	651	for_cond1=`echo $zeile \| cut -d" " -s -f4`
	652	for_cond2=`echo $zeile \| cut -d" " -s -f5`
[1]	653
	654	if [[ "$for_host" = "" \|\| ( "$for_host" = $host && "$for_cond1" = "$cond1" && "$for_cond2" = "$cond2" ) \|\| $(echo "$input_list$output_list"\|grep -c "$for_host") != 0 ]]
	655	then
	656
	657	# BEI COMPILER- CPP- ODER LINKEROPTIONEN EVTL ":" DURCH " "
	658	# ERSETZEN. "::" WIRD DURCH ":" ERSETZT.
	659	value=`echo $value \| sed 's/::/%DUM%/g' \| sed 's/:/ /g' \| sed 's/%DUM%/:/g'`
	660
	661
	662	# ENVIRONMENT-VARIABLE WIRD WERT AUS KONFIGURATIONSDATEI
	663	# ZUGEWIESEN, WENN SIE SELBST NOCH KEINEN WERT UEBER DIE
	664	# ENTSPRECHENDE SCRIPT-OPTION ERHALTEN HAT. SOLCHE
	665	# VARIABLEN HAETTEN DANN DEN WERT "" ODER IM INTEGER-FALL DEN
	666	# WERT 0. ALLGEMEINE REGEL ALSO: SCRIPT-OPTION GEHT UEBER
	667	# KONFIGURATIONSDATEI
	668	if [[ "$(eval echo \$$var)" = "" \|\| "$(eval echo \$$var)" = "0" ]]
	669	then
	670	eval $var=\$value
	671
	672	# EVTL. BILDSCHIRMAUSGABEN DER ENVIRONMENT-VARIABLEN
	673	if [[ $do_trace = true ]]
	674	then
	675	printf "\n*** ENVIRONMENT-VARIABLE $var = $value"
	676	fi
	677	fi
	678
	679	# WENN ENVIRONMENT-VARIABLE HOST VEREINBART, DANN SOFORT AUSWERTEN
	680	# WERT VON do-remote WIRD BEI DATEIVERBINDUNGEN BENOETIGT
	681	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	682	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	683	if [[ $var = host ]]
	684	then
	685	if [[ -n $host && "$host" != $localhost ]]
	686	then
	687	do_batch=true
	688	do_remote=true
	689	case $host in
	690	(ibm\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
[83]	691	(*) printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	692	printf "\n is not available"
[1]	693	locat=nqs; exit;;
	694	esac
	695	else
	696	host=$localhost
	697	fi
	698	fi
	699
	700	# VOM BENUTZER DEFINIERTE ENVIRONMENT VARIABLEN MUESSEN PRINZIPIELL
	701	# EXPORTIERT WERDEN, DA SIE VIELLEICHT IN WEITER UNTEN AUFZURUFEN-
	702	# DEN PROGRAMMEN BENOETIGT WERDEN
	703	export $var
	704	fi
	705
	706
	707
	708
	709	elif [[ "$(echo $zeile \| cut -c1-3)" = "EC:" ]]
	710	then
	711
	712	# ZEILE DEFINIERT ERROR-KOMMANDO
	713	(( iec = iec + 1 ))
	714	zeile=$(echo $zeile \| cut -c4-)
	715	err_command[$iec]="$zeile"
	716
	717	elif [[ "$(echo $zeile \| cut -c1-3)" = "IC:" ]]
	718	then
	719
	720	# ZEILE DEFINIERT INPUT-KOMMANDO
	721	(( iic = iic + 1 ))
	722	zeile=$(echo $zeile \| cut -c4-)
	723	in_command[$iic]="$zeile"
	724
	725	elif [[ "$(echo $zeile \| cut -c1-3)" = "OC:" ]]
	726	then
	727
	728	# ZEILE DEFINIERT OUTPUT-KOMMANDO
	729	(( ioc = ioc + 1 ))
	730	zeile=$(echo $zeile \| cut -c4-)
	731	out_command[$ioc]="$zeile"
	732
	733	else
	734
	735	# ZEILE DEFINIERT DATEIVERBINDUNG. EINLESEN DER DATEIEIGENSCHAFTEN
	736	# s2a: in/out - Feld
	737	# s2b: loc - Feld (optional)
	738	# s2c: tr/ar - Feld (optional)
[69]	739	# echo $zeile \| cut -d" " -f1-2 \| read s1 s2
	740	s1=`echo $zeile \| cut -d" " -f1`
	741	s2=`echo $zeile \| cut -d" " -s -f2`
[1]	742	s2a=$(echo $s2 \| cut -d":" -f1)
	743	if [[ $(echo $s2 \| grep -c ":") = 0 ]]
	744	then
	745	s2b=""
	746	s2c=""
	747	else
[69]	748	# echo $s2 \| cut -d":" -f2-3 \| sed 's/:/ /g' \| read s2b s2c
	749	s2b=`echo $s2 \| cut -d":" -f2 \| sed 's/:/ /g'`
	750	s2c=`echo $s2 \| cut -d":" -s -f3 \| sed 's/:/ /g'`
[1]	751	fi
[69]	752	# echo $zeile \| cut -d" " -f3-6 \| read s3 s4 s5 s6
	753	s3=`echo $zeile \| cut -d" " -f3`
	754	s4=`echo $zeile \| cut -d" " -s -f4`
	755	s5=`echo $zeile \| cut -d" " -s -f5`
	756	s6=`echo $zeile \| cut -d" " -s -f6`
[1]	757
	758
	759	# ABSPEICHERN DER DATEIVERBINDUNG, FALLS IN INPUT- ODER OUTPUT-LIST
	760	# VERMERKT. VARIABLE S3 KANN AUCH LISTE ENTHALTEN (FELDTRENNER ":")
	761	# DATEIVERBINDUNG WIRD DANN NICHT ABGESPEICHERT UND GEPRUEFT, WENN
	762	# PROGRAMMLAUF AUF REMOTE-MASCHINE ERFOLGT UND DATEI NUR LOKAL VOR-
	763	# HANDEN SEIN MUSS (D.H. s2b = loc)
	764	IFSALT="$IFS"; IFS="$IFS:"
	765	if [[ "$s2a" = in && ! ( $do_remote = true && ( "$s2b" = loc \|\| "$s2b" = locopt ) ) ]]
	766	then
	767	found=false
	768	for actual in $input_list
	769	do
	770	for formal in $s3
	771	do
	772	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	773	done
	774	done
	775	if [[ $found = true ]]
	776	then
	777	(( iin = iin + 1 ))
	778	localin[$iin]=$s1; transin[$iin]=$s2b; actionin[$iin]=$s2c;
	779	typein[$iin]=$s3; pathin[$iin]=$s4; endin[$iin]=$s5;
	780	extin[$iin]=$s6
	781	fi
	782	elif [[ "$s2a" = out && ! ( $do_remote = true && "$s2b" = loc ) ]]
	783	then
	784	found=false
	785	for actual in $output_list
	786	do
	787	for formal in $s3
	788	do
	789	[[ $actual = $formal \|\| "$formal" = "-" ]] && found=true
	790	done
	791	done
	792	if [[ $found = true ]]
	793	then
	794	(( iout = iout + 1 ))
	795	localout[$iout]=$s1; actionout[$iout]=$s2c; typeout[$iout]=$s3;
	796	pathout[$iout]=$s4; endout[$iout]=$s5; extout[$iout]=$s6
	797	fi
	798	elif [[ "$s2a" != in && "$s2a" != out ]]
	799	then
	800	printf "\n +++ I/O-attribute in configuration file $config_file has the invalid"
	801	printf "\n value \"$s2\". Only \"in\" and \"out\" are allowed!"
	802	locat=connect; exit
	803	fi
	804	IFS="$IFSALT"
	805	fi
	806	done < $config_file
	807
	808	else
	809
	810
	811	# INTERPRETATION DER KONFIGURATIONSDATEI MITTELS FORTRAN 90 - PROGRAMM
	812	[[ $silent = false ]] && printf "..."
	813	export cond1 cond2 config_file do_remote do_trace input_list localhost output_list
	814	export interpreted_config_file=.icf.$RANDOM
	815
	816
[69]	817
	818	# ENVIRONMENT-VARIABLEN FUER INTERPRET_CONFIG UEBER NAMELIST_DATEI ZUR
	819	# VERFUEGUNG STELLEN
	820	cat > .mrun_environment << %%END%%
	821	&mrun_environment cond1 = '$cond1', cond2 = '$cond2',
	822	config_file = '$config_file', do_remote = '$do_remote',
	823	do_trace = '$do_trace', host = '$host',
	824	input_list = '$input_list', icf = '$interpreted_config_file',
	825	localhost = '$localhost', output_list = '$output_list' /
	826
	827	%%END%%
	828
	829	# WERTE VON MRUN-OPTIONEN SICHERN UND DAMIT GEGEBENENFALLS SPAETER DIE
	830	# IN DER KONFIGURAIONSDATEI ANGEGEBENEN WERTE UEBERSTEUERN
	831	mrun_memory=$memory
[127]	832	mrun_group_number=$group_number
[69]	833	mrun_cpumax=$cpumax
	834	mrun_numprocs=$numprocs
	835
[66]	836	if [[ $localhost_realname = "gate" ]]
	837	then
	838	interpret_config_gate.x
	839	else
	840	interpret_config.x
	841	fi
[71]	842	rm .mrun_environment
[1]	843
[71]	844
[1]	845	# AUSFUEHRUNG DER GENERIERTEN SHELL-KOMMANDOS IN DIESER SHELL
	846	chmod u+x $interpreted_config_file
	847	export PATH=$PATH:.
	848	. $interpreted_config_file
[71]	849	rm $interpreted_config_file
[1]	850
[71]	851
[69]	852	# OPTIONSWERTE UEBERSTEUERN KONFIGURATIONSDATEI
[71]	853	[[ $mrun_memory != 0 ]] && memory=$mrun_memory
[127]	854	[[ "$mrun_group_number" != "none" ]] && group_number=$mrun_group_number
[71]	855	[[ $mrun_cpumax != 0 ]] && cpumax=$mrun_cpumax
	856	[[ "$mrun_numprocs" != "" ]] && numprocs=$mrun_numprocs
[69]	857
[1]	858	fi
	859
	860
	861	# QUELLTEXTVERZEICHNIS AUF LOKALER MASCHINE AUS KONFIGURATIONSDATEI
	862	# BESTIMMEN (WUERDE SONST EVTL. DAS VERZEICHNIS DES JEWEILS UNTER -h
	863	# ANGEGEBENEN REMOTE-RECHNERS SEIN)
	864	# BEI BATCH-JOBS SIND DIE ZU UEBERSETZENDEN PROGRAMMTEILE SCHON KOMPLETT
	865	if [[ "$SOURCES_COMPLETE" = "" ]]
	866	then
	867
	868	# ZUERST PRUEFEN, OB EIN GLOBALER QUELLTEXTPFAD FUER ALLE RECHNER
	869	# VEREINBART WURDE
	870	source_path=""
	871	line=""
	872	grep "%source_path" $config_file > tmp_mrun
	873	while read line
	874	do
	875	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	876	then
	877	if [[ "$(echo $line \| cut -d" " -f3)" = "" ]]
	878	then
	879	global_source_path=`echo $line \| cut -d" " -f2`
	880	fi
	881	fi
	882	done < tmp_mrun
	883
	884	line=""
	885	found=false
	886	grep " $localhost" $config_file \| grep "%source_path" > tmp_mrun
	887	while read line
	888	do
	889	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	890	then
	891	if [[ $found = true ]]
	892	then
	893	printf "\n\n +++ more than one source path found in configuration file"
	894	printf "\n for local host \"$localhost\" "
	895	locat=source_path; exit
	896	fi
	897	source_path=`echo $line \| cut -d" " -f2`
	898	found=true
	899	fi
	900	done < tmp_mrun
	901	rm tmp_mrun
	902
	903	if [[ "$source_path" = "" ]]
	904	then
	905	if [[ "$global_source_path" != "" ]]
	906	then
	907	source_path=$global_source_path
	908	else
	909	printf "\n\n +++ no source path found in configuration file"
	910	printf "\n for local host \"$localhost\" "
	911	locat=source_path; exit
	912	fi
	913	fi
	914	eval source_path=$source_path
	915
	916	if [[ ! -d $source_path ]]
	917	then
	918	printf "\n\n +++ source path \"$source_path\" on local host"
	919	printf "\n \"$localhost\" does not exist"
	920	locat=source_path; exit
	921	fi
	922
	923	fi
	924
	925
[78]	926	# GLOBALE REVISIONSNUMMER ERMITTELN (FORTSETZUNGSLAEUFEN WIRD DIESE
	927	# DURCH OPTION -G MITGETEILT)
	928	if [[ "$global_revision" = "" ]]
	929	then
	930	global_revision=`svnversion $source_path 2>/dev/null`
	931	global_revision="Rev: $global_revision"
	932	fi
[1]	933
[78]	934
[1]	935	# NOCHMAL PRUEFEN, OB AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL
	936	# (HOST KANN IN KONFIGURATIONSDATEI ANDERS FESTGELEGT WORDEN SEIN)
	937	# WERT VON do_remote WIRD FUER DATEIVERBINDUNGEN BENOETIGT.
	938	# WENN AUF REMOTE-MASCHINE GERECHNET WIRD, IST GLEICHZEITIG KLAR,
	939	# DASS EIN BATCH-JOB GESTARTET WERDEN MUSS
	940	if [[ -n $host && "$host" != $localhost ]]
	941	then
	942	do_batch=true
	943	do_remote=true
	944	case $host in
[5]	945	(ibm\|ibmb\|ibmh\|ibms\|ibmy\|lctit\|nech\|neck\|unics) true;;
[1]	946	(*) printf "\n"
[83]	947	printf "\n +++ sorry: execution of batch jobs on remote host \"$host\""
	948	printf "\n is not available"
[1]	949	locat=nqs; (( iec = 0 )); exit;;
	950	esac
	951	else
	952	host=$localhost
	953	fi
	954
	955
	956	# PRUEFUNG EINIGER PROZESSORZAHLANGABEN BEI RECHNUNGEN AUF PARALLELRECHNERN
	957	if [[ "$cond1" = parallel \|\| "$cond2" = parallel ]]
	958	then
	959
	960	# PRUEFEN, OB DIE ANZAHL DER ZU VERWENDENDEN PES ANGEGEBEN WURDE
	961	if [[ ! -n $numprocs ]]
	962	then
	963	printf "\n"
	964	printf "\n +++ option \"-K parallel\" requires additional specification"
	965	printf "\n of the number of processors to be used by"
	966	printf "\n mrun-option \"-X\" or by environment-variable"
	967	printf "\n \"numprocs\" in the configuration file"
	968	locat=numprocs; (( iec = 0 )); exit
	969	fi
	970
	971	# PRUEFEN, OB DIE PROZESSORANZAHL PRO KNOTEN ANGEGEBEN WURDE (GGF.
	972	# DEFAULT-WERT SETZEN) UND OB SIE EIN GANZZAHLIGER TEILER DER
	973	# GESAMTPROZESSORANZAHL IST
	974	if [[ $host = nech \|\| $host = neck \|\| $host = ibmh \|\| $host = ibmb \|\| $host = ibms ]]
	975	then
	976	[[ "$tasks_per_node" = "" ]] && tasks_per_node=6
	977	(( ival = $tasks_per_node ))
	978	(( pes = numprocs ))
	979	# if [[ $(echo $package_list \| grep -c dvrp_graphics+1PE) = 1 ]]
	980	# then
	981	# (( pes = pes - 1 ))
	982	# fi
	983	(( ii = pes / ival ))
	984	if (( pes - ii * ival > 0 ))
	985	then
	986	printf "\n"
	987	printf "\n +++ tasks per node (option \"-T\") must be an integral"
	988	printf "\n divisor of the total number of processors (option \"-X\")"
	989	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	990	locat=tasks_per_node; (( iec = 0 )); exit
	991	fi
	992	fi
	993
	994	# IBMY HAT NUR EINEN KNOTEN
	995	if [[ $host = ibmy ]]
	996	then
	997	if [[ "$tasks_per_node" != "" && "$tasks_per_node" != "$numprocs" ]]
	998	then
	999	printf "\n"
	1000	printf "\n +++ on ibmy, tasks per node (option \"-T\") must be equal to the"
	1001	printf "\n total number of processors (option \"-X\")"
	1002	printf "\n values of this mrun-call: \"-T $tasks_per_node\" \"-X $numprocs\""
	1003	locat=tasks_per_node; (( iec = 0 )); exit
	1004	fi
	1005	fi
	1006
	1007	# FALLS OPENMP PARALLELISIERUNG VERWENDET WERDEN SOLL, ANZAHL VON THREADS
	1008	# SETZEN UND ZAHL DER TASKS PRO KNOTEN AUF 1 SETZEN
	1009	if [[ $use_openmp = true ]]
	1010	then
	1011	threads_per_task=$tasks_per_node
	1012	tasks_per_node=1
	1013	fi
	1014	OOPT="-O $threads_per_task"
	1015	TOPT="-T $tasks_per_node"
	1016
	1017	# GESAMTZAHL DER KNOTEN BESTIMMEN
	1018	if [[ "$tasks_per_node" != "" ]]
	1019	then
	1020	(( nodes = numprocs / ( tasks_per_node * threads_per_task ) ))
	1021	fi
	1022
	1023	# PRUEFEN, OB NODE USAGE EINEN ERLAUBTEN WERT HAT BZW. DEN DEFAULT
	1024	# SETZEN
	1025	if [[ $node_usage = default ]]
	1026	then
	1027	if [[ $host = ibms ]]
	1028	then
	1029	node_usage=shared
[118]	1030	elif [[ $host = lctit ]]
	1031	then
[129]	1032	node_usage=sla3
[1]	1033	else
	1034	node_usage=not_shared
	1035	fi
	1036	fi
[126]	1037	if [[ $node_usage != shared && $node_usage != not_shared && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]]
[1]	1038	then
	1039	printf "\n"
	1040	printf "\n +++ node usage (option \"-n\") is only allowed to be set"
	1041	printf "\n \"shared\" or \"not_shared\""
	1042	locat=tasks_per_node; (( iec = 0 )); exit
	1043	fi
	1044
	1045	fi
	1046
	1047	# PRUEFEN, OB HOSTFILE EXISTIERT
	1048	if [[ -n $hostfile ]]
	1049	then
	1050	if [[ ! -f $hostfile ]]
	1051	then
	1052	printf "\n"
	1053	printf "\n +++ hostfile \"$hostfile\" does not exist"
	1054	locat=hostfile; exit
	1055	fi
	1056	fi
	1057
	1058	# PRUEFEN, OB RHOSTS DATEI EXISTIERT. GEGEBENENFALLS ANLEGEN BZW. ERWEITERN
	1059	if [[ $host = ibmy && $do_remote = false ]]
	1060	then
	1061	if [[ ! -f $HOME/.rhosts ]]
	1062	then
	1063	echo "gfdl5.yonsei.ac.kr" > $HOME/.rhosts
	1064	printf "\n\n *** file:"
	1065	printf "\n $HOME/.rhosts"
	1066	printf "\n was created\n"
	1067	fi
	1068	if [[ $(grep -c gfdl5.yonsei.ac.kr $HOME/.rhosts) = 0 ]]
	1069	then
	1070	echo "gfdl5.yonsei.ac.kr" >> $HOME/.rhosts
	1071	printf "\n\n *** file:"
	1072	printf "\n $HOME/.rhosts"
	1073	printf "\n was extended by the name of the current host\n"
	1074	fi
	1075	fi
	1076
	1077
	1078
	1079	# FALLS NICHT VORGEGEBEN, DEFAULT-QUEUE AUF DER ZIELMASCHINE FESTLEGEN
	1080	if [[ $queue = none ]]
	1081	then
	1082	case $host in
	1083	(ibmb) if [[ $node_usage = shared ]]
	1084	then
	1085	queue=cshare
	1086	else
	1087	queue=csolo
	1088	fi;;
	1089	(ibmh) if [[ $node_usage = shared ]]
	1090	then
	1091	queue=cshare
	1092	else
	1093	queue=csolo
	1094	fi;;
	1095	(ibmy) queue=parallel;;
[129]	1096	(lctit) queue=sla3;;
[1]	1097	(nech) queue=none;;
	1098	(neck) queue=P;;
	1099	(unics) queue=unics;;
	1100	esac
	1101	fi
	1102
	1103
	1104	# VOLLSTAENDIGE DATEINAMEN DER INPUT-FILES BILDEN,
	1105	# INPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1106	# ERMITTELN
	1107	(( i = 0 ))
	1108	while (( i < iin ))
	1109	do
	1110	(( i = i + 1 ))
	1111	(( maxcycle = 0 ))
	1112
	1113	# NAMENSBILDUNG (EVTL. IST FESTER DATEINAME VORGEGEBEN)
	1114	if [[ "${actionin[$i]}" = di ]]
	1115	then
	1116	remotepathin[$i]=${pathin[$i]}/${endin[$i]} # REMOTE-PFAD ERST AUF
	1117	# REM-MASCHINE AUSWERTEN
	1118	eval filename=${pathin[$i]}/${endin[$i]}
	1119	else
	1120	remotepathin[$i]=${pathin[$i]}/${afname}${endin[$i]} # REMOTE-PFAD ERST AUF
	1121	# REM-MASCHINE AUSWERTEN
	1122	eval filename=${pathin[$i]}/${afname}${endin[$i]}
	1123	fi
	1124
	1125	# PRUEFEN AUF VORHANDENSEIN
	1126	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1127	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1128	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1129	then
	1130	# DATEIEN MIT EXTENSION (Z.B. NC) MUESSEN NICHT ZWINGEND VORHANDEN
	1131	# SEIN, DESHALB IN SOLCHEN FAELLEN KEIN ABBRUCH. DIES IST NUR EINE
	1132	# VORUEBERGEHENDE LOESUNG (OKT 05). NICHT ZWINGEND BENOETIGTE
	1133	# EINGABEDATEIEN SOLLTEN EINE SPEZIELLE OPTION IN DER DATEI-
	1134	# VERBINDUNGSANWEISUNG BEKOMMEN (Z.B. inopt?)
	1135	if [[ "${transin[$i]}" != "locopt" ]]
	1136	then
	1137	printf "\n\n +++ INPUT-file: "
	1138	if [[ "${extin[$i]}" = "" ]]
	1139	then
	1140	printf "\n $filename"
	1141	else
	1142	printf "\n $filename.${extin[$i]}"
	1143	fi
	1144	printf "\n does not exist\n"
	1145	locat=input; exit
	1146	else
	1147	transin[$i]="unavailable"
	1148	fi
	1149	else
	1150
	1151	# ZYKLUSNUMMER FESTSTELLEN
	1152	ls -1 -d $filename > filelist 2>/dev/null
	1153	ls -1 -d $filename.* >> filelist 2>/dev/null
	1154	while read zeile
	1155	do
	1156	cycle=$(print $zeile \| cut -f2 -d".")
	1157	if [[ "$cycle" = "$zeile" ]]
	1158	then
	1159	(( icycle = 0 ))
	1160	elif [[ "$cycle" = "${extin[$i]}" ]]
	1161	then
	1162	(( icycle = 0 ))
	1163	else
	1164	(( icycle = $cycle ))
	1165	fi
	1166	if (( icycle > maxcycle ))
	1167	then
	1168	(( maxcycle = icycle ))
	1169	file_to_be_used=$zeile
	1170	fi
	1171	done <filelist
	1172	rm filelist
	1173
	1174	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN
	1175	if (( maxcycle > 0 ))
	1176	then
	1177	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1178	then
	1179	filename=${filename}.$maxcycle.${extin[$i]}
	1180	else
	1181	filename=${filename}.$maxcycle
	1182	fi
	1183	else
	1184	if [[ "${extin[$i]}" != " " && "${extin[$i]}" != "" ]]
	1185	then
	1186	filename=${filename}.${extin[$i]}
	1187	fi
	1188	fi
	1189
	1190	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1191	# DA SPAETER BEI RUECKSPEICHERN VOM ARCHIVSYSTEM EVTL. BENOETIGT
	1192	absnamein[$i]=$filename
	1193	if (( maxcycle > 0 ))
	1194	then
	1195	if [[ "${actionin[$i]}" = di ]]
	1196	then
	1197	frelin[$i]=${endin[$i]}.$maxcycle
	1198	else
	1199	frelin[$i]=${afname}${endin[$i]}.$maxcycle
	1200	fi
	1201	else
	1202	if [[ "${actionin[$i]}" = di ]]
	1203	then
	1204	frelin[$i]=${endin[$i]}
	1205	else
	1206	frelin[$i]=${afname}${endin[$i]}
	1207	fi
	1208	fi
	1209
	1210	fi
	1211	done
	1212
	1213
	1214	# VOLLSTAENDIGE DATEINAMEN (OHNE $ ODER ~) DER OUTPUT-FILES BILDEN,
	1215	# OUTPUT-DATEIEN AUF VORHANDENSEIN PRUEFEN UND EVTL. HOECHSTE ZYKLUSNUMMER
	1216	# ERMITTELN ODER, FALLS NICHT VORHANDEN, PRUEFEN, OB SIE SICH ANLEGEN LASSEN
	1217	# DIESE AKTIONEN FINDEN NICHT STATT, WENN PROGRAMM AUF REMOTE-MASCHINE
	1218	# RECHNET UND DATEI ANSCHLIESSEND TRANSFERIERT WERDEN SOLL!
	1219	(( i = 0 ))
	1220	while (( i < iout ))
	1221	do
	1222	(( i = i + 1 ))
	1223	if [[ ! ( $fromhost != $localhost && ( "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ) ) ]]
	1224	then
	1225	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = trpe ]]
	1226	then
	1227	actionout[$i]=""
	1228	elif [[ "${actionout[$i]}" = tra ]]
	1229	then
	1230	actionout[$i]=a
	1231	fi
	1232	(( maxcycle = 0 ))
	1233	eval filename=${pathout[$i]}/${fname}${endout[$i]}
	1234	eval catalogname=${pathout[$i]}
	1235	if [[ $(ls $filename* 2>&1 \| grep -c "not found") = 1 \|\| \
	1236	$(ls $filename* 2>&1 \| grep -c "No such file") = 1 \|\| \
	1237	$(ls $filename* 2>&1 \| grep -c "does not exist") = 1 ]]
	1238	then
	1239
	1240	# OUTPUT-DATEI NICHT VORHANDEN. PRUEFEN, OB ANLEGEN MOEGLICH.
	1241	if cat /dev/null > $filename
	1242	then
	1243	rm $filename
	1244	else
	1245
	1246	# PRUEFEN, OB KATALOG VORHANDEN UND EVTL. DIESEN ANLEGEN
	1247	if [[ ! -d $catalogname ]]
	1248	then
	1249	if mkdir -p $catalogname
	1250	then
	1251	printf "\n\n *** directory:"
	1252	printf "\n $catalogname"
	1253	printf "\n was created\n"
	1254	else
	1255	printf "\n\n +++ OUTPUT-file:"
	1256	printf "\n $filename"
	1257	printf "\n cannot be created, because directory does not exist"
	1258	printf "\n and cannot be created either"
	1259	printf "\n"
	1260	locat=output ; exit
	1261	fi 2>/dev/null
	1262	else
	1263	printf "\n\n +++ OUTPUT-file:"
	1264	printf "\n $filename"
	1265	printf "\n cannot be created, although directory exists"
	1266	printf "\n"
	1267	locat=output ; exit
	1268	fi
	1269	fi 2>/dev/null
	1270	else
	1271
	1272	# ZYKLUSNUMMER FESTSTELLEN
	1273	ls -1 -d $filename > filelist 2>/dev/null
	1274	ls -1 -d $filename.* >> filelist 2>/dev/null
	1275	while read zeile
	1276	do
	1277	cycle=$(print $zeile \| cut -f2 -d".")
	1278	if [[ "$cycle" = "$zeile" \|\| "$cycle" = ${extout[$i]} ]]
	1279	then
	1280	(( icycle = 1 ))
	1281	else
	1282	(( icycle = $cycle + 1 ))
	1283	fi
	1284	if (( icycle > maxcycle ))
	1285	then
	1286	(( maxcycle = icycle ))
	1287	fi
	1288	done <filelist
	1289	rm filelist
	1290	fi
	1291
	1292	# EVTL. ZYKLUSNUMMER AN DATEINAMEN ANFUEGEN UND PRUEFEN, OB SICH
	1293	# DATEI AUCH WIRKLICH ANLEGEN LAESST. IM APPEND-FALL MUSS AN DEN
	1294	# HOECHSTEN VORHANDENEN ZYKLUS-ANGEHAENGT WERDEN. ANLAGEPRUEFUNG
	1295	# IST DANN NATUERLICH NICHT ZULAESSIG BZW. MOEGLICH
	1296	if [[ "${actionout[$i]}" != a ]]
	1297	then
	1298	if (( maxcycle > 0 ))
	1299	then
	1300	filename=${filename}.$maxcycle
	1301	if cat /dev/null > $filename
	1302	then
	1303	rm $filename
	1304	else
	1305	printf "\n +++ OUTPUT-file:"
	1306	printf "\n $filename"
	1307	printf "\n cannot be created"
	1308	locat=output ; exit
	1309	fi
	1310	fi
	1311	else
	1312	(( maxcycle = maxcycle - 1 ))
	1313	if (( maxcycle > 0 ))
	1314	then
	1315	filename=${filename}.$maxcycle
	1316	fi
	1317	fi
	1318
	1319	# DATEINAMEN OHNE PFAD ABER MIT ZYKLUSNUMMER ABSPEICHERN,
	1320	# DA SPAETER BEI ABLAGE AUF ARCHIVSYSTEM BZW. FUER
	1321	# DATEI OUTPUT_FILE_CONNECTIONS EVTL. BENOETIGT
	1322	pathout[$i]=$filename
	1323	if (( maxcycle > 0 ))
	1324	then
	1325	frelout[$i]=${fname}${endout[$i]}.$maxcycle
	1326	else
	1327	frelout[$i]=${fname}${endout[$i]}
	1328	fi
	1329
	1330	fi
	1331	done
	1332
	1333
[83]	1334	# DAS DVRP-PAKET ERFORDERT EINE ENTSPRECHENDE BIBLIOTHEK
	1335	if [[ $(echo $package_list \| grep -c dvrp_graphics) != 0 ]]
	1336	then
	1337	if [[ "$dvrp_inc" = "" ]]
	1338	then
	1339	printf "\n\n +++ no value for \"dvrp_inc\" given in configuration file"
	1340	printf "\n This is required for the dvrp_graphics package.\n"
	1341	locat=dvrp; exit
	1342	fi
	1343	if [[ "$dvrp_lib" = "" ]]
	1344	then
	1345	printf "\n\n +++ no value for \"dvrp_lib\" given in configuration file"
	1346	printf "\n This is required for the dvrp_graphics package.\n"
	1347	locat=dvrp; exit
	1348	fi
	1349	fi
	1350
	1351
[1]	1352	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM ODER NUR EIN AUSFUEHRBARES
	1353	# PROGRAMM VEREINBART WURDE (IN DIESEM FALL BRAUCHT IM WEITEREN NICHT
	1354	# UEBERSETZT ZU WERDEN)
	1355	if [[ "$mainprog" = "" && "$executable" = "" ]]
	1356	then
	1357	printf "\n +++ neither main program nor executable defined"
	1358	locat=source; exit
	1359	elif [[ "$mainprog" != "" && "$executable" != "" ]]
	1360	then
	1361	printf "\n +++ main program as well as executable defined"
	1362	locat=source; exit
	1363	elif [[ "$mainprog" = "" && "$executable" != "" ]]
	1364	then
	1365	do_compile=false
	1366	fi
	1367
	1368
	1369	# ALLE ZU UEBERSETZENDEN PROGRAMMTEILE ZUSAMMENSAMMELN
	1370	# BEI BATCH-JOBS IST DIES NICHT NOETIG, WEIL DIE PROGRAMMTEILE BEREITS DURCH
	1371	# DEN MRUN-AUFRUF ERMITTELT SIND, DER DEN BATCH-JOB GENERIERT HAT, UND
	1372	# IM VERZEICHNIS SOURCES_FOR_RUN_... ABGELEGT SIND
	1373	if [[ $do_compile = true && "$SOURCES_COMPLETE" = "" ]]
	1374	then
	1375
[5]	1376	[[ "$source_list" = LM ]] && source_list=LOCALLY_MODIFIED
	1377	[[ "$source_list" = WP ]] && source_list=WRITE_PERMIT
[1]	1378
[5]	1379	if [[ $restart_run != true ]]
[1]	1380	then
	1381	rm -rf SOURCES_FOR_RUN_$fname
	1382	mkdir SOURCES_FOR_RUN_$fname
	1383	fi
	1384
	1385
	1386	# EVTL. ZU UEBERSETZENDE PROGRAMMTEILE DADURCH BESTIMMEN, DASS GEPRUEFT
	1387	# WIRD, WELCHE DATEIEN WRITE-PERMIT BESITZEN (DATEIEN SOLLTEN DESHALB
	1388	# UNTER RCS-KONTROLLE STEHEN). MIT DER VARIABLEN EXCLUDE KOENNEN
	1389	# BESTIMMTE DATEIEN GRUNDSAETZLICH VON DER UEBERSETZUNG AUSGESCHLOSSEN
	1390	# WERDEN. DIES IST NUR BEI MANUELLEM START VON MRUN DURCH DEN BENUTZER
	1391	# MOEGLICH, DA BEI AUTOMATISCHEN RESTARTS TEST DURCH DIE TATSAECHLICH
	1392	# ZU UBERSETZENDEN DATEIEN ERSETZT IST.
	1393	# ALLE ERMITTELTEN DATEIEN WERDEN IM VERZEICHNIS SOURCES_FOR_RUN_...
	1394	# GESAMMELT
[5]	1395	if [[ "$source_list" = WRITE_PERMIT ]]
[1]	1396	then
	1397
	1398	source_list=""
	1399	cd $source_path
	1400
	1401
	1402	# ALLE MOEGLICHEN QUELLCODEDATEIEN AUFLISTEN
	1403	Names=$(ls -1 *.f90 2>&1)
	1404	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && Filenames="$Names"
	1405	Names=$(ls -1 *.F90 2>&1)
	1406	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && Filenames="$Filenames $Names"
	1407	Names=$(ls -1 *.F 2>&1)
	1408	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && Filenames="$Filenames $Names"
	1409	Names=$(ls -1 *.f 2>&1)
	1410	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && Filenames="$Filenames $Names"
	1411	Names=$(ls -1 *.c 2>&1)
	1412	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && Filenames="$Filenames $Names"
	1413
	1414
	1415	# DATEIEN MIT WRITE-PERMIT NACH SOURCES_FOR_RUN_... KOPIEREN
	1416	for dateiname in $Filenames
	1417	do
	1418	if [[ -w $dateiname ]]
	1419	then
	1420	if [[ "$exclude" = "" \|\| $(echo $exclude \| grep -c $dateiname) = 0 ]]
	1421	then
	1422	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1423	source_list=$source_list"$dateiname "
	1424	fi
	1425	fi
	1426	done
	1427
	1428	cd - > /dev/null
	1429
	1430
[5]	1431	elif [[ "$source_list" = LOCALLY_MODIFIED ]]
	1432	then
	1433
	1434	# MODIFIZIERTE DATEIEN DER SVN-ARBEITSKOPIE BESTIMMEN
	1435	source_list=""
	1436	cd $source_path
	1437
	1438
	1439	# PRUEFEN, OB VERZEICHNIS UEBERHAUPT UNTER SVN-KONTROLLE STEHT
	1440	if [[ ! -d .svn ]]
	1441	then
	1442	printf "\n\n +++ source directory"
	1443	printf "\n \"$source_path\" "
	1444	printf "\n is not under control of \"subversion\"."
	1445	printf "\n Please do not use mrun-option \"-s LOCALLY MODIFIED\"\n"
	1446	fi
	1447
	1448
	1449	# ALLE MODIFIZIERTEN QUELLCODEDATEIEN AUFLISTEN
	1450	Filenames=""
[69]	1451	svn status > tmp_mrun
	1452	while read line
[5]	1453	do
	1454	firstc=`echo $line \| cut -c1`
	1455	if [[ $firstc = M \|\| $firstc = "?" ]]
	1456	then
	1457	Name=`echo "$line" \| cut -c8-`
	1458	extension=`echo $Name \| cut -d. -f2`
	1459	if [[ "$extension" = f90 \|\| "$extension" = F90 \|\| "$extension" = f \|\| "$extension" = F \|\| "$extension" = c ]]
	1460	then
	1461	Filenames="$Filenames "$Name
	1462	fi
	1463	fi
[69]	1464	done < tmp_mrun
[5]	1465
	1466
	1467	# DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1468	for dateiname in $Filenames
	1469	do
	1470	cp $dateiname $working_directory/SOURCES_FOR_RUN_$fname
	1471	source_list=$source_list"$dateiname "
	1472	done
	1473
	1474	cd - > /dev/null
	1475
	1476
[1]	1477	# MITTELS OPTION -s ANGEGEBENE DATEIEN NACH SOURCES_FOR_RUN_... KOPIEREN
	1478	# BEI AUTOMATISCHEN FORTSETZUNGSLAEUFEN SIND DORT SCHON ALLE DATEIEN
	1479	# VORHANDEN
[5]	1480	elif [[ "$source_list" != "" && $restart_run != true ]]
[1]	1481	then
	1482
	1483	cd $source_path
	1484
	1485	for filename in $source_list
	1486	do
	1487
	1488	# QUELLTEXT-DATEI DARF KEINE PFADE BEINHALTEN
	1489	if [[ $(print $filename \| grep -c "/") != 0 ]]
	1490	then
	1491	printf "\n +++ source code file: $filename"
	1492	printf "\n must not contain (\"/\") "
	1493	locat=source; exit
	1494	fi
	1495
	1496	if [[ ! -f $filename ]]
	1497	then
	1498	printf "\n +++ source code file: $filename"
	1499	printf "\n does not exist"
	1500	locat=source; exit
	1501	else
	1502	cp $filename $working_directory/SOURCES_FOR_RUN_$fname
	1503	fi
	1504
	1505	done
	1506
	1507	cd - > /dev/null
	1508
	1509	fi
	1510
	1511
	1512	# PRUEFEN, OB ENTWEDER HAUPTPROGRAMM VORHANDEN UND ES EVTL. IN DER
	1513	# LISTE DER ZU UEBERSETZENDEN PROGRAMMTEILE MIT ENTHALTEN IST (WENN
	1514	# NICHT, WIRD ES DIESER LISTE HINZUGEFUEGT)
[5]	1515	if [[ $restart_run != true ]]
[1]	1516	then
	1517
	1518	if [[ ! -f "$source_path/$mainprog" ]]
	1519	then
	1520	printf "\n\n +++ main program: $mainprog"
	1521	printf "\n does not exist in source directory"
	1522	printf "\n \"$source_path\"\n"
	1523	locat=source; exit
	1524	else
	1525	if [[ $(echo $source_list \| grep -c $mainprog) = 0 ]]
	1526	then
	1527	cp $source_path/$mainprog SOURCES_FOR_RUN_$fname
	1528	source_list=${mainprog}" $source_list"
	1529	fi
	1530	fi
	1531	fi
	1532
	1533
	1534	# DATEIEN AUS ZUSAETZLICHEM QUELLVERZEICHNIS HINZUFUEGEN
[5]	1535	if [[ $restart_run != true && "$add_source_path" != "" ]]
[1]	1536	then
	1537
	1538	# GIBT ES DAS VERZEICHNIS UEBERHAUPT?
	1539	if [[ ! -d $add_source_path ]]
	1540	then
	1541	printf "\n\n +++ WARNING: additional source code directory"
	1542	printf "\n \"$add_source_path\" "
	1543	printf "\n does not exist or is not a directory."
	1544	printf "\n No source code will be used from this directory!\n"
	1545	add_source_path=""
	1546	sleep 3
	1547	else
	1548
	1549	cd $add_source_path
	1550
	1551	Names=$(ls -1 *.f90 2>&1)
	1552	[[ $(echo $Names \| grep -c '*.f90') = 0 ]] && AddFilenames="$Names"
	1553	Names=$(ls -1 *.F90 2>&1)
	1554	[[ $(echo $Names \| grep -c '*.F90') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1555	Names=$(ls -1 *.F 2>&1)
	1556	[[ $(echo $Names \| grep -c '*.F') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1557	Names=$(ls -1 *.f 2>&1)
	1558	[[ $(echo $Names \| grep -c '*.f') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1559	Names=$(ls -1 *.c 2>&1)
	1560	[[ $(echo $Names \| grep -c '*.c') = 0 ]] && AddFilenames="$AddFilenames $Names"
	1561
	1562	cd - > /dev/null
	1563	cd SOURCES_FOR_RUN_$fname
	1564
	1565	for dateiname in $AddFilenames
	1566	do
	1567	if [[ -f $dateiname ]]
	1568	then
	1569	printf "\n +++ source code file \"$dateiname\" found in additional"
	1570	printf "\n source code directory \"$add_source_path\" "
	1571	printf "\n as well as in directory \"$source_path\"."
	1572	locat=source; exit
	1573	fi
	1574
	1575	cp $add_source_path/$dateiname .
	1576	source_list="$source_list $dateiname"
	1577
	1578	# Default User-Interface von der Liste entfernen, falls Datei
	1579	# ein User-Interface enthaelt
	1580	if [[ $( cat $dateiname \| grep -c "END SUBROUTINE user_parin" ) != 0 ]]
	1581	then
[50]	1582	if [[ $dateiname != user_interface.f90 && -f user_interface.f90 ]]
[1]	1583	then
	1584	rm -rf user_interface.f90
	1585	source_list=`echo $source_list \| sed -e 's/user_interface.f90//'`
[50]	1586	printf "\n\n *** default \"user_interface.f90\" removed from the files to be translated"
[1]	1587	printf "\n since a user-interface is found in file"
	1588	printf "\n \"$add_source_path/$dateiname\" \n"
	1589	sleep 3
	1590	else
	1591	printf "\n\n *** user-interface file \"$dateiname\" "
	1592	printf "\n added to the files to be translated \n"
	1593	sleep 3
	1594	fi
	1595	fi
	1596	done
	1597
	1598	cd - > /dev/null
	1599	fi
	1600	fi
	1601
	1602
	1603	# ALLE UNTERPROGRAMME, DIE ZU VEREINBARTEN SOFTWAREPAKETEN GEHOEREN,
	1604	# DER LISTE DER ZU UEBERSETZENDEN DATEIEN HINZUFUEGEN
[5]	1605	if [[ $restart_run != true && -n $package_list ]]
[1]	1606	then
	1607
	1608	cd $source_path
	1609
	1610	for package in $package_list
	1611	do
	1612
	1613	[[ $package = "dvrp_graphics+1PE" ]] && package=dvrp_graphics
	1614
	1615	# ERMITTELE ALLE DATEIEN, DIE ZUM PAKET GEHOEREN
	1616	# FEHLERMELDUNGEN WERDEN ABGEFANGEN, DA * AUCH VERZEICHNISSNAMEN
	1617	# LIEFERT
	1618	package_source_list=`grep "defined( __$package " * 2>/dev/null \| cut -f1 -d:`
	1619
	1620
	1621	# FUEGE DIESE DATEIEN DER LISTE DER ZU UEBERSETZENDEN DATEIEN
	1622	# HINZU, FALLS SIE NOCH NICHT DAZUGEHOEREN
	1623	for source_list_name in $package_source_list
	1624	do
	1625	if [[ $(echo $source_list \| grep -c $source_list_name) = 0 ]]
	1626	then
	1627
	1628	# NUR DATEIEN MIT GUELTIGEN ENDUNGEN VERWENDEN
	1629	ending=`echo $source_list_name \| cut -f2 -d.`
	1630	if [[ "$ending" = f90 \|\| "$ending" = F90 \|\| "$ending" = f \|\| "$ending" = F \|\| "$ending" = c ]]
	1631	then
	1632	cp $source_list_name $working_directory/SOURCES_FOR_RUN_$fname
	1633	source_list="$source_list $source_list_name"
	1634	fi
	1635	fi
	1636	done
	1637	done
	1638
	1639	cd - > /dev/null
	1640	fi
	1641
	1642
	1643	# MAKEFILE AUF VORHANDENSEIN PRUEFEN UND KOPIEREN
	1644	# BEI RESTART-LAEUFEN LIEGT ES SCHON IM VERZEICHNIS SOURCES_FOR_RUN...
[82]	1645	if [[ "$restart_run" != true ]]
[1]	1646	then
	1647	[[ "$makefile" = "" ]] && makefile=$source_path/Makefile
	1648	if [[ ! -f $makefile ]]
	1649	then
	1650	printf "\n +++ file \"$makefile\" does not exist"
	1651	locat=make; exit
	1652	else
	1653	cp $makefile SOURCES_FOR_RUN_$fname/Makefile
	1654	fi
	1655	fi
	1656
	1657	fi # do_compile=true
	1658
	1659
	1660	# FALLS PROGRAMMTEILE UEBERSETZT WERDEN SOLLEN, FOLGEN JETZT EINIGE
	1661	# UEBERPRUEFUNGEN UND DAS SETZEN DER PRAEPROZESSOR-DIREKTIVEN
	1662	if [[ $do_compile = true ]]
	1663	then
	1664
	1665	# PRAEPROZESSOR-DIREKTIVEN ZUM SELEKTIVEN AUSWAEHLEN VON CODETEILEN
	1666	# ZUSAMMENSETZEN
[83]	1667	# DIREKTIVEN ZUM AKTIVIEREN VON RECHNERSPEZIFISCHEM CODE
[1]	1668	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1669	then
[82]	1670	cpp_options="${cpp_options},-D__ibm=__ibm"
[1]	1671	elif [[ $(echo $localhost \| cut -c1-3) = nec ]]
	1672	then
[82]	1673	cpp_options="$cpp_options -D__nec"
	1674	elif [[ $(echo $localhost \| cut -c1-2) = lc ]]
	1675	then
	1676	cpp_options="$cpp_options -D__lc"
[1]	1677	else
[82]	1678	cpp_options="$cpp_options -D__$localhost"
[1]	1679	fi
[83]	1680
	1681	# DIREKTIVEN DIE DURCH OPTION -K BESTIMMT WERDEN (Z.B. PARALLEL)
[1]	1682	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1683	then
[82]	1684	[[ -n $cond1 ]] && cpp_options="${cpp_options},-D__$cond1=__$cond1"
	1685	[[ -n $cond2 ]] && cpp_options="${cpp_options},-D__$cond2=__$cond2"
[1]	1686	else
[82]	1687	[[ -n $cond1 ]] && cpp_options="$cpp_options -D__$cond1"
	1688	[[ -n $cond2 ]] && cpp_options="$cpp_options -D__$cond2"
[1]	1689	fi
[83]	1690
	1691	# DIREKTIVEN DIE SOFTWAREPAKETE AKTIVIEREN (OPTION -p)
[1]	1692	if [[ -n $package_list ]]
	1693	then
	1694	for package in $package_list
	1695	do
	1696	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1697	then
	1698	if [[ $package != "dvrp_graphics+1PE" ]]
	1699	then
[82]	1700	cpp_options="${cpp_options},-D__$package=__$package"
[1]	1701	else
[82]	1702	cpp_options="${cpp_options},-D__dvrp_graphics=__dvrp_graphics"
[1]	1703	export use_seperate_pe_for_dvrp_output=true
	1704	fi
	1705	else
	1706	if [[ $package != "dvrp_graphics+1PE" ]]
	1707	then
[82]	1708	cpp_options="$cpp_options -D__$package"
[1]	1709	else
[82]	1710	cpp_options="$cpp_options -D__dvrp_graphics"
[1]	1711	export use_seperate_pe_for_dvrp_output=true
	1712	fi
	1713	fi
	1714	done
	1715	fi
[83]	1716
	1717	# DIREKTIVEN DIE DURCH OPTION -D FESTGELEGT SIND
[1]	1718	if [[ -n $cpp_opts ]]
	1719	then
	1720	for popts in $cpp_opts
	1721	do
[82]	1722	if [[ $(echo $localhost \| cut -c1-3) = ibm ]]
	1723	then
	1724	cpp_options="${cpp_options},-D__$popts=__$popts"
	1725	else
	1726	cpp_options="$cpp_options -D__$popts"
	1727	fi
[1]	1728	done
	1729	fi
	1730
	1731	else
	1732
	1733
	1734	# BEI LOKALEN RECHNUNGEN PRUEFEN, OB EXECUTABLE VORHANDEN
	1735	if [[ $do_remote = false ]]
	1736	then
	1737	if [[ ! -f $executable ]]
	1738	then
	1739	printf "\n +++ executable file: $executable"
	1740	printf "\n does not exist"
	1741	locat=executable; exit
	1742	fi
	1743	fi
	1744	fi
	1745
	1746
	1747	# JOBMODUS FESTSTELLEN
	1748	if [[ "$ENVIRONMENT" = BATCH && $localhost != lctit \|\| "$QUEUE" != interactive && $localhost = lctit ]]
	1749	then
	1750	jobmo=BATCH
	1751	else
	1752	jobmo=INTERACTIVE
	1753	fi
	1754
	1755
	1756	# HOSTSPEZIFISCHE DEFAULT-COMPILER SETZEN, FALLS NICHT BEREITS
	1757	# DURCH BENUTZER ANDERWEITIG VEREINBART
	1758	if [[ "$compiler_name" = "" ]]
	1759	then
[82]	1760
	1761	printf "\n +++ no compiler specified for \"$localhost $cond1 $cond2\""
	1762	locat=compiler_name; exit
	1763
[1]	1764	fi
	1765
	1766
	1767	# COMPILER AUF NECK UEBERSCHREIBEN
	1768	[[ $localhost = neck ]] && compiler_name=mpif90
	1769
	1770
	1771
	1772	# TEMPORAEREN KATALOGNAMEN BESTIMMEN
	1773	kennung=$RANDOM
	1774	if [[ "$tmp_user_catalog" = "" ]]
	1775	then
	1776	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1777	then
	1778	tmp_user_catalog=$TMPDIR
	1779	elif [[ $localhost = nech ]]
	1780	then
	1781	tmp_user_catalog=$WRKSHR
	1782	else
	1783	tmp_user_catalog=/tmp
	1784	fi
	1785	fi
	1786	TEMPDIR=$tmp_user_catalog/${usern}.$kennung
	1787
	1788
	1789	# KATALOGNAMEN FUER ZWISCHENSPEICHERUNG VON FORTSETZUNGSLAUFDATEIEN
	1790	# BESTIMMEN
	1791	if [[ "$tmp_data_catalog" = "" ]]
	1792	then
	1793	if [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	1794	then
	1795	tmp_data_catalog=$WORK/mrun_restart_data
	1796	elif [[ $localhost = nech ]]
	1797	then
	1798	tmp_data_catalog=$WRKSHR/mrun_restart_data
	1799	else
	1800	tmp_data_catalog=/tmp/mrun_restart_data
	1801	fi
	1802	fi
	1803
	1804
	1805	# EVENTUELL BEI LOKALEN RECHNUNGEN $-ZEICHEN IN ENVIRONMENT-VARIABLEN
	1806	# ERSETZEN
	1807	if [[ $do_remote = false && $do_compile = true ]]
	1808	then
	1809	eval fopts=\"$fopts\"
	1810	eval lopts=\"$lopts\"
	1811	fi
	1812
	1813
	1814
	1815	# COMPILE- UND LINK-OPTIONEN BESTIMMEN
[82]	1816	fopts="$fopts $netcdf_inc $dvrp_inc"
	1817	lopts="$lopts $netcdf_lib $dvrp_lib"
[1]	1818	ROPTS="$ropts"
[108]	1819	if [[ ( $(echo $host \| cut -c1-3) = nec \|\| $(echo $host \| cut -c1-3) = ibm \|\| $host = lctit \|\| $host = lcfimm ) && -n $numprocs ]]
[1]	1820	then
	1821	XOPT="-X $numprocs"
	1822	fi
	1823
	1824
	1825
	1826	# PRUEFEN DER CPU-ZEIT. (CPUMAX WIRD ALS ENV-VARIABLE VOM HAUTPRO-
	1827	# GRAMM BENOETIGT
	1828	done=false
	1829	while [[ $done = false ]]
	1830	do
	1831	cputime=$cpumax
	1832	if (( $cputime == 0 ))
	1833	then
	1834	printf "\n +++ cpu-time is undefined"
	1835	printf "\n >>> Please type CPU-time in seconds as INTEGER:"
	1836	printf "\n >>> "
	1837	read cputime 1>/dev/null 2>&1
	1838	else
	1839	done=true
	1840	fi
	1841	cpumax=$cputime
	1842	done
	1843
	1844	(( minuten = cputime / 60 ))
	1845	(( sekunden = cputime - minuten * 60 ))
	1846
	1847
	1848	# PRUEFEN DER KERNSPEICHERANFORDERUNG
	1849	if [[ $do_batch = true ]]
	1850	then
	1851	done=false
	1852	while [[ $done = false ]]
	1853	do
	1854	if (( memory == 0 ))
	1855	then
	1856	printf "\n +++ memory demand is undefined"
	1857	printf "\n >>> Please type memory in MByte per process as INTEGER:"
	1858	printf "\n >>> "
	1859	read memory 1>/dev/null 2>&1
	1860	else
	1861	done=true
	1862	fi
	1863	done
	1864	fi
	1865
	1866
	1867	# PRUEFEN, OB FUER REMOTE-RECHNUNGEN EIN BENUTZERNAME ANGEGEBEN WURDE
	1868	if [[ $do_remote = true && -z $remote_username ]]
	1869	then
	1870	while [[ -z $remote_username ]]
	1871	do
	1872	printf "\n +++ username on remote host \"$host\" is undefined"
	1873	printf "\n >>> Please type username:"
	1874	printf "\n >>> "
	1875	read remote_username
	1876	done
	1877	mc="$mc -u$remote_username"
	1878	fi
	1879
	1880	###########################################################################
	1881	# HEADER-AUSGABE
	1882	###########################################################################
	1883
	1884
	1885	calltime=$(date)
	1886	printf "\n"
	1887	# [[ $silent = false ]] && clear
	1888	printf "#--------------------------------------------------------------# \n"
	1889	printf "\| $version$calltime \| \n"
	1890	printf "\| \| \n"
	1891	spalte1="called on:"; spalte2=$localhost_realname
	1892	printf "\| $spalte1$spalte2 \| \n"
	1893	if [[ $local_compile = false ]]
	1894	then
	1895	if [[ $do_remote = true ]]
	1896	then
	1897	spalte1="execution on:"; spalte2="$host (username: $remote_username)"
	1898	else
	1899	spalte1="execution on:"; spalte2="$host ($localhost_realname)"
	1900	fi
	1901	else
	1902	spalte1="compiling test only!"; spalte2=""
	1903	fi
	1904	printf "\| $spalte1$spalte2 \| \n"
	1905	if [[ -n $numprocs ]]
	1906	then
	1907	spalte1="number of PEs:"; spalte2=$numprocs
	1908	printf "\| $spalte1$spalte2 \| \n"
	1909	fi
	1910	if [[ -n $tasks_per_node ]]
	1911	then
	1912	spalte1="tasks per node:"; spalte2="$tasks_per_node (number of nodes: $nodes)"
	1913	printf "\| $spalte1$spalte2 \| \n"
	1914	fi
	1915	if [[ $threads_per_task != 1 ]]
	1916	then
	1917	spalte1="threads per task:"; spalte2="$threads_per_task"
	1918	printf "\| $spalte1$spalte2 \| \n"
	1919	fi
	1920	printf "\| \| \n"
	1921	if [[ $do_compile = true ]]
	1922	then
[82]	1923	spalte1=cpp-directives:; spalte2=$cpp_options
[1]	1924	printf "\| $spalte1$spalte2 \| \n"
[82]	1925	zeile=$(echo "$cpp_options" \| cut -c41-)
[1]	1926	while [[ "$zeile" != "" ]]
	1927	do
	1928	spalte1=""
	1929	spalte2=$zeile
	1930	printf "\| $spalte1$spalte2 \| \n"
	1931	zeile=$(echo "$zeile" \| cut -c41-)
	1932	done
	1933
[82]	1934	spalte1=compiler-options:; spalte2="$fopts"
[1]	1935	printf "\| $spalte1$spalte2 \| \n"
[82]	1936	zeile=$(echo "$fopts" \| cut -c41-)
[1]	1937	while [[ "$zeile" != "" ]]
	1938	do
	1939	spalte1=""
	1940	spalte2=$zeile
	1941	printf "\| $spalte1$spalte2 \| \n"
	1942	zeile=$(echo "$zeile" \| cut -c41-)
	1943	done
	1944
[82]	1945	spalte1=linker-options:; spalte2=$lopts
[1]	1946	printf "\| $spalte1$spalte2 \| \n"
[82]	1947	zeile=$(echo "$lopts" \| cut -c41-)
[1]	1948	while [[ "$zeile" != "" ]]
	1949	do
	1950	spalte1=""
	1951	spalte2=$zeile
	1952	printf "\| $spalte1$spalte2 \| \n"
	1953	zeile=$(echo "$zeile" \| cut -c41-)
	1954	done
	1955
	1956	spalte1="main program":; spalte2=$mainprog
	1957	printf "\| $spalte1$spalte2 \| \n"
	1958	else
	1959	spalte1=executable:; spalte2=$executable
	1960	printf "\| $spalte1$spalte2 \| \n"
	1961	fi
	1962	printf "\| \| \n"
	1963	spalte1="base name of files":; spalte2=$fname
	1964	printf "\| $spalte1$spalte2 \| \n"
	1965	if [[ $fname != $afname ]]
	1966	then
	1967	spalte1="base name of input files":; spalte2=$afname
	1968	printf "\| $spalte1$spalte2 \| \n"
	1969	fi
	1970	spalte1="INPUT control list":; spalte2=$input_list
	1971	printf "\| $spalte1$spalte2 \| \n"
	1972	spalte1="OUTPUT control list":; spalte2=$output_list
	1973	printf "\| $spalte1$spalte2 \| \n"
	1974
	1975	if [[ $do_batch = true \|\| "$LOADLBATCH" = yes ]]
	1976	then
	1977	spalte1="memory demand / PE":; spalte2="$memory MB"
	1978	printf "\| $spalte1$spalte2 \| \n"
	1979	spalte1=CPU-time:; spalte2="$minuten:$sekunden"
	1980	printf "\| $spalte1$spalte2 \| \n"
	1981	fi
	1982
	1983	if [[ $do_compile = true ]]
	1984	then
	1985	printf "\| \| \n"
	1986	printf "\| Files to be compiled: \| \n"
	1987	zeile=$source_list
	1988	while [[ "$zeile" != "" ]]
	1989	do
	1990	spalte3=$zeile
	1991	printf "\| $spalte3 \| \n"
	1992	zeile=$(echo "$zeile" \| cut -c61-)
	1993	done
	1994	fi
	1995	printf "#--------------------------------------------------------------#"
	1996
	1997
	1998
	1999	# BEDINGTE AUSGABE DER DATEIVERBINDUNGEN
	2000	if [[ $do_trace = true ]]
	2001	then
	2002	(( i = 0 ))
	2003	while (( i < iin ))
	2004	do
	2005	(( i = i + 1 ))
	2006	if (( i == 1 ))
	2007	then
	2008	printf "\n\n >>> INPUT-file assignments:\n"
	2009	fi
	2010	printf "\n ${localin[$i]} : ${absnamein[$i]}"
	2011	done
	2012	(( i = 0 ))
	2013	while (( i < iout ))
	2014	do
	2015	(( i = i + 1 ))
	2016	if (( i == 1 ))
	2017	then
	2018	printf "\n\n >>> OUTPUT-file assignments:\n"
	2019	fi
	2020	printf "\n ${localout[$i]} : ${pathout[$i]}"
	2021	done
	2022	(( i = 0 ))
	2023	while (( i < iic ))
	2024	do
	2025	(( i = i + 1 ))
	2026	if (( i == 1 ))
	2027	then
	2028	printf "\n\n >>> INPUT-commands:\n"
	2029	fi
	2030	printf "\n ${in_command[$i]}"
	2031	done
	2032	(( i = 0 ))
	2033	while (( i < ioc ))
	2034	do
	2035	(( i = i + 1 ))
	2036	if (( i == 1 ))
	2037	then
	2038	printf "\n\n >>> OUTPUT-commands:\n"
	2039	fi
	2040	printf "\n ${out_command[$i]}"
	2041	done
	2042	fi
	2043
	2044
	2045	# ABFRAGEN BEI AUFRUF AUF LOKALER MASCHINE
	2046	if [[ $remotecall = false && $silent = false && $jobmo != BATCH ]]
	2047	then
	2048	antwort=dummy
	2049	printf "\n\n"
	2050	while [[ "$antwort" != y && "$antwort" != Y && "$antwort" != n && "$antwort" != N ]]
	2051	do
	2052	printf " >>> everything o.k. (y/n) ? "
	2053	read antwort
	2054	done
	2055	if [[ $antwort = n \|\| $antwort = N ]]
	2056	then
	2057	locat=user_abort; (( iec = 0 )); exit
	2058	fi
	2059	if [[ $do_batch = true ]]
	2060	then
	2061	printf " >>> batch-job will be created and submitted"
	2062	else
	2063	if [[ $local_compile = false ]]
	2064	then
	2065	printf " >>> MRUN will now continue to execute on this machine"
	2066	else
	2067	printf " >>> a test compilation will now be carried out on this machine"
	2068	fi
	2069	fi
	2070	fi
	2071
	2072
	2073
	2074
	2075	# FALLS AUF DIESER MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	2076	# CHENDE AKTIONEN DURCHGEFUEHRT
	2077	if [[ $do_batch = false ]]
	2078	then
	2079
	2080
	2081	# TEMPORAEREN KATALOG ERZEUGEN
	2082	mkdir -p $TEMPDIR
	2083	chmod go+rx $TEMPDIR
	2084	tmpcreate=true
	2085
	2086
	2087	# SAEMTLICHE QUELLTEXT-DATEIEN BZW. AUSFUEHRBARES PROGRAMM IN
	2088	# TEMPORAERES VERZEICHNIS KOPIEREN
	2089	if [[ $do_compile = true ]]
	2090	then
	2091
	2092	# ON NEC, COMPILATION IS DONE ON HOST CROSS VIA CROSS COMPILING
	2093	# CREATE A TEMPORARY DIRECTORY ON THAT MACHINE (HOME MOUNTED VIA NFS)
	2094	if [[ $localhost = nech ]]
	2095	then
	2096	TEMPDIR_COMPILE=$HOME/work/${usern}.$kennung
	2097	if mkdir -p $TEMPDIR_COMPILE
	2098	then
	2099	printf "\n *** \"$TEMPDIR_COMPILE\" "
	2100	printf "\n is generated as temporary directory for cross compiling\n"
	2101	else
	2102	printf "\n +++ creating directory \"$TEMPDIR_COMPILE\" "
	2103	printf "\n needed for cross compilation failed"
	2104	locat=compile
	2105	exit
	2106	fi
	2107	else
	2108	TEMPDIR_COMPILE=$TEMPDIR
	2109	fi
	2110
	2111
[82]	2112	# PFADNAMEN FUER DAS MAKE-DEPOSITORY ERMITTELN
	2113	line=""
	2114	grep "%depository_path" $config_file > tmp_mrun
	2115	while read line
	2116	do
	2117	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
	2118	then
	2119	if [[ "$(echo $line \| cut -d" " -s -f3)" = "" ]]
[1]	2120	then
[82]	2121	global_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2122	fi
[82]	2123	fi
	2124	done < tmp_mrun
[1]	2125
[82]	2126	line=""
	2127	grep " $localhost" $config_file \| grep "%depository_path" > tmp_mrun
	2128	while read line
	2129	do
	2130	if [[ "$line" != "" && $(echo $line \| cut -c1) != "#" ]]
[1]	2131	then
[82]	2132	local_depository_path=`echo $line \| cut -d" " -s -f2`
[1]	2133	fi
[82]	2134	done < tmp_mrun
[1]	2135
[82]	2136	if [[ "$local_depository_path" = "" ]]
	2137	then
	2138	if [[ "$global_depository_path" != "" ]]
[1]	2139	then
[82]	2140	local_depository_path=$global_depository_path
[1]	2141	else
[82]	2142	printf "\n\n +++ no depository path found in configuration file"
	2143	printf "\n for local host \"$localhost\" "
	2144	printf "\n please set \"\%depository_path\" in configuration file\n"
	2145	locat=config_file; exit
[1]	2146	fi
[82]	2147	fi
	2148	eval local_depository_path=$local_depository_path
[1]	2149
[82]	2150	basename=`print $mainprog \| cut -f1 -d"."`
	2151	eval make_depository=${local_depository_path}/${basename}_current_version.tar
	2152	if [[ ! -f $make_depository ]]
	2153	then
	2154	printf "\n"
	2155	printf "\n *** WARNING: make depository \"$make_depository\" not found"
	2156	printf "\n \"make\" will fail, if the Makefile or other source files are missing\n"
	2157	else
	2158	cp $make_depository $TEMPDIR_COMPILE
[1]	2159	cd $TEMPDIR_COMPILE
[82]	2160	tar -xf $make_depository > /dev/null 2>&1
[1]	2161	cd - > /dev/null
	2162	fi
[82]	2163
	2164	cp SOURCES_FOR_RUN_$fname/* $TEMPDIR_COMPILE
	2165
	2166	# FALLS USER-INTERFACE VORHANDEN UND AUF DATEI MIT ANDEREM NAMEN
	2167	# ALS user_interface.f90 LIEGT, DIESEN GEAENDERTEN NAMEN INS
	2168	# MAKEFILE EINTRAGEN
	2169	cd $TEMPDIR_COMPILE
	2170	interface_file=`grep -l "END SUBROUTINE user_parin" $source_list`
	2171	if [[ "$interface_file" != "" ]]
	2172	then
	2173	interface_file=`echo $interface_file \| cut -d"." -f1`
	2174	mv Makefile Makefile_old
	2175	sed "s/user_interface/$interface_file/g" Makefile_old > Makefile
	2176	fi
	2177	cd - > /dev/null
[1]	2178	else
	2179	cp $executable ${TEMPDIR}/a.out
	2180	fi
	2181
	2182
	2183	# WECHSEL IN TEMPORAEREN KATALOG
	2184	cd $TEMPDIR
	2185	printf "\n *** changed to temporary directory: $TEMPDIR"
	2186
	2187
	2188	# OUTPUT-DATEI-VERBINDUNGEN AUF TEMPORAERER DATEI ABLEGEN
	2189	# DIESE DATEI KANN VON SPAETER AUFZURUFENDEN BENUTZERPROZEDUREN GELESEN
	2190	# WERDEN, UM ZU LOKALEN DATEINAMEN GEHOERENDE PERMANENTE NAMEN ZU
	2191	# ERMITTELN
	2192	(( i = 0 ))
	2193	while (( i < iout ))
	2194	do
	2195	(( i = i + 1 ))
	2196	if [[ "${actionout[$i]}" = tr \|\| "${actionout[$i]}" = tra \|\| "${actionout[$i]}" = trpe ]]
	2197	then
	2198	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${localhost}_${fname}${endout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2199	else
	2200	printf "${localout[$i]} ${actionout[$i]}\n${pathout[$i]}\n${frelout[$i]}\n" >> OUTPUT_FILE_CONNECTIONS
	2201	fi
	2202	done
	2203
	2204
	2205	# EVTL. UEBERSETZUNGSAKTIONEN STARTEN
	2206	if [[ $do_compile = true ]]
	2207	then
	2208
	2209
	2210	# COMPILING WITH MAKE (ON NEC COMPILER IS CALLED ON HOST CROSS)
[82]	2211	printf "\n\n\n *** compilation starts \n$striche\n"
	2212	printf " *** compilation with make using following options:\n"
	2213	printf " compilername: $compiler_name\n"
	2214	printf " options: $fopts\n"
	2215	printf " preprocessor-directives: $cpp_options \n"
	2216	printf " linker-options: $lopts \n"
	2217	printf " source code files: $source_list \n"
	2218
	2219	if [[ $localhost = nech ]]
[1]	2220	then
[82]	2221	ssh 136.172.44.192 -l $usern ". /SX/opt/etc/initsx.sh; cd \$HOME/work/${usern}.$kennung; sxmake -f Makefile PROG=a.out F90=$compiler_name COPT=\"$cpp_options\" F90FLAGS=\"$fopts\" LDFLAGS=\"$lopts\" "
	2222	cp $TEMPDIR_COMPILE/a.out .
	2223	[[ $? != 0 ]] && compile_error=true
	2224	rm -rf $TEMPDIR_COMPILE
[1]	2225	else
[118]	2226	[[ $localhost = lctit ]] && export LM_LICENSE_FILE=27050@tggls
[82]	2227	make -f Makefile PROG=a.out F90=$compiler_name COPT="$cpp_options" F90FLAGS="$fopts" LDFLAGS="$lopts"
	2228	fi
[1]	2229
	2230	if [[ $? != 0 \|\| "$compile_error" = true \|\| "$module_compile_error" = true ]]
	2231	then
	2232	printf "\n +++ error occured while compiling or linking"
	2233	locat=compile
	2234	exit
	2235	else
	2236	printf "$striche\n *** compilation finished \n"
	2237	fi
	2238	fi
	2239
	2240
	2241	# FALLS NUR TESTWEISE KOMPILIERT WERDEN SOLLTE, IST MRUN JETZT FERTIG
	2242	if [[ $local_compile = true ]]
	2243	then
	2244	cd $HOME
	2245	rm -rf $TEMPDIR
	2246	locat=local_compile; exit
	2247	fi
	2248
	2249
	2250	# BEREITSTELLEN DER INPUT-DATEIEN
	2251	# SCHLEIFE UEBER ALLE VOM BENUTZER ANGEGEBENEN DATEIEN
	2252	(( i = 0 ))
	2253	while (( i < iin ))
	2254	do
	2255	(( i = i + 1 ))
	2256	if (( i == 1 ))
	2257	then
	2258	printf "\n\n *** providing INPUT-files:\n$striche"
	2259	fi
	2260
	2261
	2262	# OPTIONALE DATEIEN BEI NICHTVORHANDENSEIN UEBERGEHEN
	2263	if [[ "${transin[$i]}" = unavailable ]]
	2264	then
	2265	if [[ "${extin[$i]}" = "" \|\| "${extin[$i]}" = " " ]]
	2266	then
	2267	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}\" "
	2268	printf "\n is not available!"
	2269	else
	2270	printf "\n +++ WARNING: input file \"${pathin[$i]}/${afname}${endin[$i]}.${extin[$i]}\" "
	2271	printf "\n is not available!"
	2272	fi
	2273	continue
	2274	fi
	2275
	2276	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2277	files_for_pes=false; datentyp=file
	2278	if [[ "${actionin[$i]}" = pe && -n $numprocs ]]
	2279	then
	2280	files_for_pes=true; datentyp=directory
	2281	actionin[$i]=""
	2282	elif [[ "${actionin[$i]}" = pe && ! -n $numprocs ]]
	2283	then
	2284	actionin[$i]=""
	2285	elif [[ "${actionin[$i]}" = arpe && -n $numprocs ]]
	2286	then
	2287	files_for_pes=true; datentyp=directory
	2288	actionin[$i]="ar"
	2289	elif [[ "${actionin[$i]}" = arpe && ! -n $numprocs ]]
	2290	then
	2291	actionin[$i]="ar"
	2292	elif [[ "${actionin[$i]}" = flpe && -n $numprocs ]]
	2293	then
	2294	files_for_pes=true; datentyp=directory
	2295	actionin[$i]="fl"
	2296	elif [[ "${actionin[$i]}" = flpe && ! -n $numprocs ]]
	2297	then
	2298	actionin[$i]="fl"
	2299	fi
	2300
	2301	if [[ $files_for_pes = true ]]
	2302	then
	2303	printf "\n >>> INPUT: ${absnamein[$i]}/.... to ${localin[$i]}"
	2304	else
	2305	printf "\n >>> INPUT: ${absnamein[$i]} to ${localin[$i]}"
	2306	fi
	2307
	2308	# INPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. ES WIRD GEPRUEFT,
	2309	# OB DIESE DATEI NOCH AUF DEM TEMPORAEREN DATENKATALOG VORHANDEN
	2310	# IST. FALLS NICHT, WIRD VERSUCHT, SIE ANSCHLIESSEND VOM ARCHIV-
	2311	# SERVER ZU HOLEN
	2312	if [[ "${actionin[$i]}" = fl ]]
	2313	then
	2314	printf "\n $datentyp will be fetched from temporary directory \"${tmp_data_catalog}\" !"
	2315	if [[ $files_for_pes = false ]]
	2316	then
	2317	if [[ -f "$tmp_data_catalog/${frelin[$i]}" ]]
	2318	then
	2319	ln $tmp_data_catalog/${frelin[$i]} ${localin[$i]}
	2320	got_tmp[$i]=true
	2321	elif [[ -f "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2322	then
	2323	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2324	printf "\n *** trying to use backup copy in \"$WORK\" "
	2325	cp $WORK/${frelin[$i]} ${localin[$i]}
	2326	else
	2327	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2328	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2329	printf "\n *** trying to get copy from archive"
	2330	actionin[$i]=ar
	2331	fi
	2332	else
	2333	if [[ -d "$tmp_data_catalog/${frelin[$i]}" ]]
	2334	then
	2335	mkdir ${localin[$i]}
[149]	2336	cd $tmp_data_catalog/${frelin[$i]}
	2337	for file in $(ls *)
	2338	do
	2339	ln $file $TEMPDIR/${localin[$i]}
	2340	done
	2341	cd $TEMPDIR
[1]	2342	got_tmp[$i]=true
	2343	elif [[ -d "$WORK/${frelin[$i]}" && $ignore_archive_error = true ]]
	2344	then
	2345	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" !"
	2346	printf "\n *** trying to use backup copy in \"$WORK\" "
	2347	cp -r $WORK/${frelin[$i]} ${localin[$i]}
	2348	else
	2349	printf "\n +++ $datentyp not found in \"$tmp_data_catalog\" "
	2350	printf "\n or \"$tmp_data_catalog\" does not exist!"
	2351	printf "\n *** trying to get copy from archive"
	2352	actionin[$i]=ar
	2353	fi
	2354	fi
	2355	fi
	2356
	2357
	2358	# DATEI LIEGT AUF ARCHIV-SERVER
	2359	if [[ "${actionin[$i]}" = ar ]]
	2360	then
	2361
	2362	if [[ $files_for_pes = false ]]
	2363	then
	2364	printf "\n file will be restored from archive-system ($archive_system)!"
	2365	else
	2366	printf "\n directory will be restored from archive-system ($archive_system)!"
	2367	fi
	2368
	2369	file_restored=false
	2370
	2371	if [[ $archive_system = asterix ]]
	2372	then
	2373	do_stagein=true
	2374	(( stagein_anz = 0 ))
	2375	while [[ $do_stagein = true ]]
	2376	do
	2377	if [[ $files_for_pes = false ]]
	2378	then
	2379	stagein -O ${frelin[$i]} > STAGEIN_OUTPUT
	2380	else
	2381	stagein -t -O ${frelin[$i]} > STAGEIN_OUTPUT
	2382	fi
	2383	cat STAGEIN_OUTPUT
	2384	if [[ $(grep -c "st.msg:i24" STAGEIN_OUTPUT) != 0 ]]
	2385	then
	2386	file_restored=true
	2387	do_stagein=false
	2388	else
	2389	(( stagein_anz = stagein_anz + 1 ))
	2390	if (( stagein_anz == 10 ))
	2391	then
	2392	printf "\n +++ stagein stoped after 10 tries"
	2393	locat=stage
	2394	exit
	2395	fi
	2396	printf "\n +++ restoring from archive failed, trying again:"
	2397	sleep 900
	2398	fi
	2399	done
	2400	elif [[ $archive_system = DMF ]]
	2401	then
	2402	if [[ $files_for_pes = false ]]
	2403	then
	2404	printf "\n +++ restoring of single files impossible with $archive_system !\n"
	2405	locat=DMF
	2406	exit
	2407	else
	2408	find $ARCHIVE/${frelin[$i]} -type m -print \| dmget
	2409	cp -r $ARCHIVE/${frelin[$i]} $PWD
	2410	file_restored=true
	2411	fi
	2412	elif [[ $archive_system = tivoli ]]
	2413	then
	2414	if [[ $files_for_pes = false ]]
	2415	then
	2416	if [[ $localhost = ibmh ]]
	2417	then
	2418	ssh $usern@hdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2419	else
	2420	ssh $usern@bdata.hlrn.de "cp $PERM/${frelin[$i]} $PWD"
	2421	fi
	2422	else
	2423	(( inode = 0 ))
	2424	while (( inode < nodes ))
	2425	do
	2426	if [[ $localhost = ibmh ]]
	2427	then
	2428	ssh $usern@hdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2429	else
	2430	ssh $usern@bdata.hlrn.de "cd $PWD; tar xf $PERM/${frelin[$i]}/${frelin[$i]}.node_$inode.tar"
	2431	fi
	2432	(( inode = inode + 1 ))
	2433	done
	2434	fi
	2435	file_restored=true
	2436	elif [[ $archive_system = ut ]]
	2437	then
	2438	if [[ $files_for_pes = false ]]
	2439	then
	2440	cp $UT/${frelin[$i]} .
	2441	else
	2442	(( inode = 0 ))
	2443	while (( inode < nodes ))
	2444	do
	2445	tar xf $UT/${frelin[$i]}/${frelin[$i]}.node_$inode.tar
	2446	(( inode = inode + 1 ))
	2447	done
	2448	fi
	2449	file_restored=true
	2450	else
	2451	printf "\n +++ archive_system=\"$archive_system\" restore impossible!"
	2452	locat=rearchive
	2453	exit
	2454	fi
	2455
	2456	if [[ $file_restored = true ]]
	2457	then
	2458
	2459	# DATEI AUCH AUF TEMPORAERES DATENVERZEICHNIS LEGEN, DAMIT
	2460	# SIE BEI WEITEREN ZUGRIFFEN NOCH VORHANDEN IST
	2461	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog; chmod g+rx $tmp_data_catalog
	2462	if [[ $files_for_pes = false ]]
	2463	then
	2464	ln -f ${frelin[$i]} $tmp_data_catalog/${frelin[$i]}
	2465	else
	2466	mkdir $tmp_data_catalog/${frelin[$i]}
	2467	ln -f ${frelin[$i]}/* $tmp_data_catalog/${frelin[$i]}
	2468	fi
	2469	got_tmp[$i]=true
	2470
	2471	# DATEI UNTER LOKALEM NAMEN ZUR VERFUEGUNG STELLEN
	2472	mv ${frelin[$i]} ${localin[$i]}
	2473
	2474	fi
	2475	fi
	2476
	2477
	2478	# DATEI LIEGT IM VOM BENUTZER ANGEGEBENEN VERZEICHNIS
	2479	if [[ "${actionin[$i]}" = "" \|\| "${actionin[$i]}" = "di" \|\| "${actionin[$i]}" = "npe" ]]
	2480	then
	2481
	2482	if [[ "${actionin[$i]}" = "npe" && -n $numprocs ]]
	2483	then
	2484
	2485	# DATEI WIRD FUER DIE PROZESSOREN EINES PARALLERECHNERS BEREITGESTELLT
	2486	printf "\n file will be provided for $numprocs processors"
	2487	mkdir ${localin[$i]}
	2488	ival=$numprocs
	2489	(( ii = 0 ))
	2490	while (( ii <= ival-1 ))
	2491	do
	2492	if (( ii < 10 ))
	2493	then
	2494	cp ${absnamein[$i]} ${localin[$i]}/_000$ii
	2495	elif (( ii < 100 ))
	2496	then
	2497	cp ${absnamein[$i]} ${localin[$i]}/_00$ii
	2498	elif (( ii < 1000 ))
	2499	then
	2500	cp ${absnamein[$i]} ${localin[$i]}/_0$ii
	2501	else
	2502	cp ${absnamein[$i]} ${localin[$i]}/_$ii
	2503	fi
	2504	(( ii = ii + 1 ))
	2505	done
	2506
	2507	else
	2508
	2509	if [[ $files_for_pes = true ]]
	2510	then
	2511
	2512	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	2513	# DATEIEN WERDEN BEREITGESTELLT, INDEM ZUERST DER GESAMTE
	2514	# KATALOGINHALT KOPIERT UND DANN DIE EINZELNEN DATEIEN
	2515	# PER MOVE UMBENANNT WERDEN
	2516	printf "\n providing $numprocs files for the respective processors"
	2517	mkdir ${localin[$i]}
	2518	cp -r ${absnamein[$i]}/* ${localin[$i]}
	2519
	2520	else
	2521	# BEREITSTELLUNG AUF EINPROZESSORRECHNERN
	2522	cp ${absnamein[$i]} ${localin[$i]}
	2523	fi
	2524	fi
	2525	fi
	2526
	2527	done
	2528	if (( i != 0 ))
	2529	then
	2530	printf "\n$striche\n *** all INPUT-files provided \n"
	2531	fi
	2532
	2533
	2534	# NAMELIST-DATEI MIT WERTEN VON ENVIRONMENT-VARIABLEN ERZEUGEN (ZU
	2535	# LESEN VON PALM)
	2536	cat > ENVPAR << %%END%%
	2537	&envpar run_identifier = '$fname', host = '$localhost',
	2538	write_binary = '$write_binary', tasks_per_node = $tasks_per_node,
[75]	2539	maximum_cpu_time_allowed = ${cpumax}.,
	2540	revision = '$global_revision' /
[1]	2541
	2542	%%END%%
	2543
	2544
	2545	# EVENTUELLE INPUT-KOMMANDOS ABARBEITEN
	2546	(( i = 0 ))
	2547	while (( i < iic ))
	2548	do
	2549	(( i = i + 1 ))
	2550	if (( i == 1 ))
	2551	then
	2552	printf "\n\n *** execution of INPUT-commands:\n$striche"
	2553	fi
	2554	printf "\n >>> ${in_command[$i]}"
	2555	eval ${in_command[$i]}
	2556	if (( i == iic ))
	2557	then
	2558	printf "\n$striche\n"
	2559	fi
	2560	done
	2561
	2562
	2563	# VERBLEIBENDE CPU-ZEIT BERECHNEN
	2564	cpurest=${cpumax}.
	2565
	2566
	2567	# PROGRAMMSTART
	2568	printf "\n\n *** execution starts in directory\n \"`pwd`\"\n$striche\n"
	2569	PATH=$PATH:$TEMPDIR
	2570
	2571	if [[ "$cond1" = debug \|\| "$cond2" = debug ]]
	2572	then
	2573	if [[ "$ENVIRONMENT" = BATCH ]]
	2574	then
	2575	printf "\n +++ debug is allowed in interactive mode only"
	2576	locat=debug
	2577	exit
	2578	fi
[5]	2579	if [[ $localhost = decalpha ]]
[1]	2580	then
	2581	dxladebug a.out
	2582	elif [[ $localhost = ibmb \|\| $localhost = ibmh ]]
	2583	then
	2584
	2585	# SETUP THE IBM MPI ENVIRONMENT
	2586	export MP_SHARED_MEMORY=yes
	2587	export AIXTHREADS_SCOPE=S
	2588	export OMP_NUM_THREADS=$threads_per_task
	2589	export AUTHSTATE=files
	2590	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2591
	2592	# FOLLOWING OPTIONS ARE MANDATORY FOR TOTALVIEW
	2593	export MP_ADAPTER_USE=shared
	2594	export MP_CPU_USE=multiple
	2595	export MP_TIMEOUT=1200
	2596
	2597	unset MP_TASK_AFFINITY
	2598
	2599	# SO FAR, TOTALVIEW NEEDS HOSTFILE MECHANISM FOR EXECUTION
	2600	#(( ii = 1 ))
	2601	#while (( ii <= $numprocs ))
	2602	#do
	2603	# echo $localhost_realname >> hostfile
	2604	# (( ii = ii + 1 ))
	2605	#done
	2606	#export MP_HOSTFILE=hostfile
	2607
	2608	if [[ "$LOADLBATCH" = yes ]]
	2609	then
	2610	totalview poe a.out $ROPTS
	2611	else
	2612	echo totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2613	export TVDSVRLAUNCHCMD=ssh
	2614	totalview poe -a a.out -procs $numprocs -rmpool 0 -nodes 1 $ROPTS
	2615	fi
	2616	else
	2617	printf "\n +++ no debug available on \"$localhost\" "
	2618	printf "\n or not implemented in mrun so far"
	2619	locat=debug
	2620	exit
	2621	fi
	2622	else
	2623	if [[ -n $numprocs ]]
	2624	then
	2625
	2626	# RUNNING THE PROGRAM ON PARALLEL MACHINES
	2627	if [[ $(echo $host \| cut -c1-3) = ibm ]]
	2628	then
	2629	# SETUP THE IBM MPI ENVIRONMENT
	2630	export MP_SHARED_MEMORY=yes
	2631	export AIXTHREAD_SCOPE=S
	2632	export OMP_NUM_THREADS=$threads_per_task
	2633	export XLSMPOPTS="spins=0:yields=0:stack=20000000"
	2634	export AUTHSTATE=files
	2635	export XLFRTEOPTS="nlwidth=132:err_recovery=no" # RECORD-LENGTH OF NAMELIST-OUTPUT
	2636	# export MP_PRINTENV=yes
	2637
	2638	# TUNING-VARIABLEN ZUR VERBESSERUNG DER KOMMUNIKATION
	2639	# ZEIGEN ABER DERZEIT (SEP 04, FEDERATION) KAUM WIRKUNG
	2640	export MP_WAIT_MODE=poll
	2641	[[ $node_usage = not_shared ]] && export MP_SINGLE_THREAD=yes
	2642	# export MP_EAGER_LIMIT=65535
	2643
	2644	# # TESTWEISE FUER TURBOMPI (JAN 05)
	2645	# export MPJ_MTAB=128
	2646	# export MPJ_ALLTOALL=1
	2647	# export MPJ_ALLTOALLV=1
	2648
	2649	if [[ "$LOADLBATCH" = yes ]]
	2650	then
	2651	printf "\n--- Control: OMP_NUM_THREADS = \"$OMP_NUM_THREADS\" \n"
	2652	if [[ "$cond1" = hpmcount \|\| "$cond2" = hpmcount ]]
	2653	then
[102]	2654	/opt/optibm/HPM_2_4_1/bin/hpmcount a.out $ROPTS
[1]	2655	else
[102]	2656	poe ./a.out $ROPTS
[1]	2657	fi
	2658	else
	2659	if [[ $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms ]]
	2660	then
[102]	2661	poe a.out -procs $numprocs -nodes 1 -rmpool 0 $ROPTS
[1]	2662	elif [[ $localhost = ibmy ]]
	2663	then
	2664	if [[ -f $hostfile ]]
	2665	then
	2666	cp $hostfile hostfile
	2667	else
	2668	(( ii = 1 ))
	2669	while (( ii <= $numprocs ))
	2670	do
	2671	echo $localhost_realname >> hostfile
	2672	(( ii = ii + 1 ))
	2673	done
	2674	fi
	2675	export MP_HOSTFILE=hostfile
[102]	2676	./a.out -procs $tasks_per_node $ROPTS
[1]	2677	else
	2678	if [[ "$host_file" = "" ]]
	2679	then
	2680	printf "\n +++ no hostfile given in configuration file"
	2681	locat=config_file
	2682	exit
	2683	else
	2684	eval host_file=$host_file
	2685	fi
	2686	export MP_HOSTFILE=$host_file
[102]	2687	poe a.out -procs $numprocs -tasks_per_node $numprocs $ROPTS
[1]	2688	fi
	2689	fi
	2690	elif [[ $host = nech \|\| $host = neck ]]
	2691	then
	2692	(( ii = nodes ))
	2693	if [[ $ii = 1 ]]
	2694	then
	2695	export F_ERRCNT=0 # acceptable number of errors before program is stopped
	2696	export MPIPROGINF=YES
[61]	2697	# export F_TRACE=YES\|FMT1\|FMT2 # output of ftrace informations to job protocol
[1]	2698	echo "*** execution on single node with mpirun"
[102]	2699	mpirun -np $numprocs ./a.out $ROPTS
[1]	2700	else
	2701	(( i = 0 ))
	2702	while (( i < ii ))
	2703	do
	2704	echo "-h $i -p $tasks_per_node -e ./mpi_exec_shell" >> multinode_config
	2705	(( i = i + 1 ))
	2706	done
	2707
	2708	echo "#!/bin/sh" > mpi_exec_shell
	2709	echo " " >> mpi_exec_shell
	2710	echo "set -u" >> mpi_exec_shell
	2711	echo "F_ERRCNT=0" >> mpi_exec_shell
	2712	echo "MPIPROGINV=YES" >> mpi_exec_shell
	2713	echo "OMP_NUM_THREADS=$threads_per_task" >> mpi_exec_shell
	2714	echo "cpurest=$cpurest" >> mpi_exec_shell
	2715	echo "fname=$fname" >> mpi_exec_shell
	2716	echo "localhost=$localhost" >> mpi_exec_shell
	2717	echo "return_addres=$return_addres" >> mpi_exec_shell
	2718	echo "return_username=$return_username" >> mpi_exec_shell
	2719	echo "tasks_per_node=$tasks_per_node" >> mpi_exec_shell
	2720	echo "write_binary=$write_binary" >> mpi_exec_shell
	2721	echo "use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2722	echo " " >> mpi_exec_shell
	2723	echo "export F_ERRCNT" >> mpi_exec_shell
	2724	echo "export MPIPROGINV" >> mpi_exec_shell
	2725	echo "export OMP_NUM_THREADS" >> mpi_exec_shell
	2726	echo "export cpurest" >> mpi_exec_shell
	2727	echo "export fname" >> mpi_exec_shell
	2728	echo "export localhost" >> mpi_exec_shell
	2729	echo "export return_addres" >> mpi_exec_shell
	2730	echo "export return_username" >> mpi_exec_shell
	2731	echo "export tasks_per_node" >> mpi_exec_shell
	2732	echo "export write_binary" >> mpi_exec_shell
	2733	echo "export use_seperate_pe_for_dvrp_output" >> mpi_exec_shell
	2734	echo " " >> mpi_exec_shell
[102]	2735	echo "exec ./a.out" >> mpi_exec_shell
[1]	2736
	2737	chmod u+x mpi_exec_shell
	2738	export MPIPROGINF=YES
	2739	mpirun -f multinode_config &
	2740	wait
	2741
	2742	fi
[82]	2743	elif [[ $(echo $host \| cut -c1-2) = lc && $host != lctit ]]
[1]	2744	then
	2745
	2746	# COPY HOSTFILE FROM SOURCE DIRECTORY OR CREATE IT, IF IT
	2747	# DOES NOT EXIST
	2748	if [[ -f $hostfile ]]
	2749	then
	2750	cp $hostfile hostfile
	2751	else
	2752	(( ii = 1 ))
	2753	while (( ii <= $numprocs / $threads_per_task ))
	2754	do
	2755	echo $localhost_realname >> hostfile
	2756	(( ii = ii + 1 ))
	2757	done
	2758	fi
	2759	(( ii = $numprocs / $threads_per_task ))
	2760	eval zeile=\"`head -n $ii hostfile`\"
	2761	printf "\n *** running on: $zeile"
	2762	export OMP_NUM_THREADS=$threads_per_task
	2763	if [[ $threads_per_task != 1 ]]
	2764	then
	2765	printf "\n threads per task: $threads_per_task"
	2766	fi
[102]	2767	if [[ $run_coupled_model = false ]]
[1]	2768	then
[102]	2769	printf "\n\n"
[109]	2770	mpiexec -machinefile hostfile -n $ii a.out $ROPTS
[1]	2771	else
[102]	2772	(( iii = ii / 2 ))
	2773	printf "\n coupled run ($iii atmosphere, $iii ocean)"
	2774	printf "\n\n"
[109]	2775	mpiexec -machinefile hostfile -n $iii -env coupling_mode atmosphere_to_ocean a.out $ROPTS &
	2776	mpiexec -machinefile hostfile -n $iii -env coupling_mode ocean_to_atmosphere a.out $ROPTS &
[102]	2777	wait
[1]	2778	fi
[102]	2779
	2780	# if [[ $scirocco = true ]]
	2781	# then
	2782	# mpiexec -machinefile hostfile -n $ii a.out $ROPTS
	2783	# else
	2784	# mpirun -machinefile hostfile -np $ii a.out $ROPTS
	2785	# fi
	2786
[1]	2787	elif [[ $host = decalpha ]]
	2788	then
[102]	2789	dmpirun -np $numprocs a.out $ROPTS
[1]	2790	elif [[ $host = lctit ]]
	2791	then
	2792	export runfile=runfile.$kennung
	2793
	2794	echo "cd $PWD" > $runfile
	2795	echo "export OMP_NUM_THREADS=$OMP_NUM_THREADS" >> $runfile
	2796	echo "export cpurest=$cpurest" >> $runfile
	2797	echo "export fname=$fname" >> $runfile
	2798	echo "export localhost=$localhost" >> $runfile
	2799	echo "export return_addres=$return_addres" >> $runfile
	2800	echo "export return_username=$return_username" >> $runfile
	2801	echo "export tasks_per_node=$tasks_per_node" >> $runfile
	2802	echo "export write_binary=$write_binary" >> $runfile
	2803	echo "export use_seperate_pe_for_dvrp_output=$use_seperate_pe_for_dvrp_output" >> $runfile
	2804	echo "./a.out" >> $runfile
	2805	chmod u+x $runfile
	2806
	2807	if [[ "$QUEUE" = interactive ]]
	2808	then
[102]	2809	mpirun -np $numprocs a.out $ROPTS
[1]	2810	else
[127]	2811	(( mem_tsubame = $memory / 1024.0 ))
	2812	echo "Memory for Tsubame for each process in GB:", $mem_tsubame
[118]	2813	# n1ge -fore -g 1S060156 -mpi $numprocs -mem 4 -N palm -q $queue a.out $ROPTS
[126]	2814	/n1ge/TITECH_GRID/tools/bin/n1ge -fore -g $group_number -mpi ${numprocs}:$tasks_per_node -mem $mem_tsubame -N palm -rt $minuten -q $queue a.out $ROPTS
[1]	2815	fi
	2816
	2817	rm $runfile
	2818	else
[102]	2819	mpprun -n $numprocs a.out $ROPTS
[1]	2820	fi
	2821	[[ $? != 0 ]] && execution_error=true
	2822
	2823
	2824	# PERFORMANCE-AUSWERTUNG MIT APPRENTICE
	2825	if [[ "$cond1" = apprentice \|\| "$cond2" = apprentice ]]
	2826	then
	2827	apprentice
	2828	fi
	2829	else
[102]	2830	a.out $ROPTS
[1]	2831	fi
	2832	fi
	2833	if [[ $? != 0 \|\| $execution_error = true ]]
	2834	then
	2835
	2836	# ABBRUCH BEI LAUFZEITFEHLER
[102]	2837	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	2838	printf "\n +++ runtime error occured"
	2839	locat=execution
	2840	exit
	2841	else
[102]	2842	# [[ ! ( "$cond1" = debug \|\| "$cond2" = debug ) ]] && cat aout_output*
[1]	2843	printf "\n$striche\n *** execution finished \n"
	2844	fi
	2845
	2846
	2847
	2848	# EVENTUELLE OUTPUT-KOMMANDOS ABARBEITEN
	2849	(( i = 0 ))
	2850	while (( i < ioc ))
	2851	do
	2852	(( i = i + 1 ))
	2853	if (( i == 1 ))
	2854	then
	2855	printf "\n\n *** execution of OUTPUT-commands:\n$striche"
	2856	fi
	2857	printf "\n >>> ${out_command[$i]}"
	2858	eval ${out_command[$i]}
	2859	if (( i == ioc ))
	2860	then
	2861	printf "\n$striche\n"
	2862	fi
	2863	done
	2864
	2865
	2866	# EVTL. INHALT DES AKTUELLEN VERZEICHNISSES AUSGEBEN
	2867	if [[ $do_trace = true ]]
	2868	then
	2869	printf "\n\n"
	2870	ls -al
	2871	fi
	2872
	2873
	2874
	2875	# OUTPUT-DATEIEN AN IHRE ZIELORTE KOPIEREN
	2876	(( i = 0 ))
	2877	while (( i < iout ))
	2878	do
	2879	(( i = i + 1 ))
	2880	if (( i == 1 ))
	2881	then
	2882	printf "\n\n *** saving OUTPUT-files:\n$striche"
	2883	fi
	2884
	2885	# PRUEFEN, OB EINZELDATEI ODER DATEI PRO PROZESSOR
	2886	files_for_pes=false; filetyp=file
	2887	if [[ "${actionout[$i]}" = pe && -n $numprocs ]]
	2888	then
	2889	files_for_pes=true; filetyp=directory
	2890	actionout[$i]=""
	2891	elif [[ "${actionout[$i]}" = pe && ! -n $numprocs ]]
	2892	then
	2893	actionout[$i]=""
	2894	elif [[ "${actionout[$i]}" = arpe && -n $numprocs ]]
	2895	then
	2896	files_for_pes=true; filetyp=directory
	2897	actionout[$i]="ar"
	2898	elif [[ "${actionout[$i]}" = arpe && ! -n $numprocs ]]
	2899	then
	2900	actionout[$i]="ar"
	2901	elif [[ "${actionout[$i]}" = flpe && -n $numprocs ]]
	2902	then
	2903	files_for_pes=true; filetyp=directory
	2904	actionout[$i]="fl"
	2905	elif [[ "${actionout[$i]}" = flpe && ! -n $numprocs ]]
	2906	then
	2907	actionout[$i]="fl"
	2908	elif [[ "${actionout[$i]}" = trpe && -n $numprocs ]]
	2909	then
	2910	files_for_pes=true; filetyp=directory
	2911	actionout[$i]="tr"
	2912	elif [[ "${actionout[$i]}" = trpe && ! -n $numprocs ]]
	2913	then
	2914	actionout[$i]="tr"
	2915	fi
	2916
	2917	if [[ ! -f ${localout[$i]} && $files_for_pes = false ]]
	2918	then
	2919	printf "\n +++ temporary OUTPUT-file ${localout[$i]} does not exist\n"
	2920	elif [[ ! -f ${localout[$i]}/_0000 && $files_for_pes = true ]]
	2921	then
	2922	printf "\n +++ temporary OUTPUT-file ${localout[$i]}/.... does not exist\n"
	2923	else
	2924
	2925
	2926	# KOPIEREN PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	2927	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	2928	# REMOTE-RECHNUNGEN
	2929	if [[ "${actionout[$i]}" = tr ]]
	2930	then
	2931	if [[ $localhost != $fromhost ]]
	2932	then
	2933	if [[ $files_for_pes = false ]]
	2934	then
	2935	cps=""
	2936	cst=""
	2937	else
	2938	cps=-c
	2939	cst="/"
	2940	fi
	2941	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	2942	then
	2943
	2944	# TRANSFER IN EIGENSTAENDIGEM JOB
	2945	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	2946	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	2947	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	2948	if [[ $files_for_pes = false ]]
	2949	then
	2950	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	2951	else
	2952	mkdir $tmp_data_catalog/TRANSFER/$file_to_transfer
	2953	ln ${localout[$i]}/* $tmp_data_catalog/TRANSFER/$file_to_transfer
	2954	fi
	2955
	2956	echo "set -x" > transfer_${localout[$i]}
	2957	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	2958
	2959	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP in seperate job to"
	2960	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst"
	2961	printf "\n or higher cycle\n"
	2962	echo "batch_scp $cps -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	2963
[1]	2964	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	2965
	2966	if [[ $localhost = nech ]]
	2967	then
[82]	2968	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	2969	else
	2970	if [[ "$LOGNAME" = b323013 ]]
	2971	then
[82]	2972	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	2973	else
[82]	2974	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	2975	fi
	2976	fi
	2977
	2978	else
	2979
	2980	# TRANSFER INNERHALB DIESES JOBS
	2981	transfer_failed=false
[82]	2982	printf "\n >>> OUTPUT: ${localout[$i]}$cst by SCP to"
	2983	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}$cst\n"
	2984	batch_scp $cps -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	2985	[[ $? != 0 ]] && transfer_failed=true
[1]	2986
	2987	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	2988	# LOKALER MASCHINE ANLEGEN
	2989	if [[ $transfer_failed = true ]]
	2990	then
	2991	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	2992	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	2993
	2994	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	2995	# ANLEGEN.
	2996	eval local_catalog=${pathout[$i]}
	2997	if [[ ! -d $local_catalog ]]
	2998	then
	2999	printf " *** local directory does not exist. Trying to create:\n"
	3000	printf " $local_catalog \n"
	3001	mkdir -p $local_catalog
	3002	fi
	3003	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3004	transfer_problems=true
	3005	fi
	3006	fi
	3007	else
	3008
	3009	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR KOPIERT WIRD
	3010	actionout[$i]=""
	3011	fi
	3012	fi
	3013
	3014
	3015	# APPEND PER FTP/SCP (IMMER IM BINAERMODUS, -M: FALLS ZIELKATALOG
	3016	# NICHT VORHANDEN, WIRD VERSUCHT, IHN ANZULEGEN), ABER NUR BEI
	3017	# REMOTE-RECHNUNGEN
	3018	if [[ "${actionout[$i]}" = tra ]]
	3019	then
	3020	if [[ $localhost != $fromhost ]]
	3021	then
	3022	if [[ $localhost = ibmh \|\| $localhost = ibmb \|\| $localhost = nech ]]
	3023	then
	3024
	3025	# TRANSFER IN EIGENSTAENDIGEM JOB
	3026	# ZUERST KOPIE DER DATEI INS TEMPORAERE DATENVERZEICHNIS
	3027	[[ ! -d $tmp_data_catalog/TRANSFER ]] && mkdir -p $tmp_data_catalog/TRANSFER
	3028	file_to_transfer=${fname}_${localout[$i]}_to_transfer_$kennung
	3029	ln -f ${localout[$i]} $tmp_data_catalog/TRANSFER/$file_to_transfer
	3030
	3031	echo "set -x" > transfer_${localout[$i]}
	3032	echo "cd $tmp_data_catalog/TRANSFER" >> transfer_${localout[$i]}
[82]	3033
	3034	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP in seperate job to"
	3035	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}"
	3036	printf "\n or higher cycle\n"
	3037	echo "batch_scp -A -b -m -u $return_username $return_addres $file_to_transfer \"${pathout[$i]}\" ${localhost}_${fname}${endout[$i]} ${extout[$i]}" >> transfer_${localout[$i]}
	3038
[1]	3039	echo "[[ \$? = 0 ]] && rm $file_to_transfer" >> transfer_${localout[$i]}
	3040
	3041	if [[ $localhost = nech ]]
	3042	then
[82]	3043	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3044	else
	3045	if [[ $LOGNAME = b323013 ]]
	3046	then
[82]	3047	subjob -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3048	else
[82]	3049	subjob -d -v -q c1 -X 0 -m 1000 -t 900 transfer_${localout[$i]}
[1]	3050	fi
	3051	fi
	3052
	3053	else
	3054
	3055	# TRANSFER INNERHALB DIESES JOBS
	3056	transfer_failed=false
[82]	3057	printf "\n >>> OUTPUT: ${localout[$i]} append by SCP to"
	3058	printf "\n ${pathout[$i]}/${localhost}_${fname}${endout[$i]}\n"
	3059	batch_scp -A -b -m -u $return_username $return_addres ${localout[$i]} "${pathout[$i]}" ${localhost}_${fname}${endout[$i]} ${extout[$i]}
	3060	[[ $? != 0 ]] && transfer_failed=true
[1]	3061
	3062	# BEI FEHLGESCHLAGENEM TRANSFER SICHERUNGSKOPIE AUF
	3063	# LOKALER MASCHINE ANLEGEN
	3064	if [[ $transfer_failed = true ]]
	3065	then
	3066	printf " +++ transfer failed. Trying to save a copy on the local host under:\n"
	3067	printf " ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung\n"
	3068
	3069	# ERSTMAL PRUEFEN, OB VERZEICHNIS EXISTIERT. GEGEBENENFALLS
	3070	# ANLEGEN
	3071	eval local_catalog=${pathout[$i]}
	3072	if [[ ! -d $local_catalog ]]
	3073	then
	3074	printf " *** local directory does not exist. Trying to create:\n"
	3075	printf " $local_catalog \n"
	3076	mkdir -p $local_catalog
	3077	fi
	3078
	3079	eval cp ${localout[$i]} ${pathout[$i]}/${localhost}_${fname}${endout[$i]}_$kennung
	3080	transfer_problems=true
	3081	fi
	3082	fi
	3083	else
	3084
	3085	# WERTZUWEISUNG, SO DASS WEITER UNTEN NUR APPEND AUF
	3086	# LOKALER MASCHINE DURCHGEFUEHRT WIRD
	3087	actionout[$i]=a
	3088	fi
	3089	fi
	3090
	3091
	3092	# OUTPUT-DATEI FUER EINEN FORTSETZUNGSLAUF. DATEI WIRD PER
	3093	# LINK AUF DEN TEMPORAEREN DATENKATALOG GELEGT. OPTION -f WIRD
	3094	# VERWENDET, FALLS DORT NOCH EINE DATEI GLEICHEN NAMENS VORHANDEN
	3095	# SEIN SOLLTE. ANSCHLIESSEND WIRD SEINE ARCHIVIERUNG ANGESTOSSEN
	3096	if [[ "${actionout[$i]}" = fl ]]
	3097	then
	3098	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3099	chmod g+rx $tmp_data_catalog
	3100	if [[ $files_for_pes = false ]]
	3101	then
	3102	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3103	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3104	ln -f ${localout[$i]} $tmp_data_catalog/${frelout[$i]}
	3105	else
	3106	printf "\n >>> OUTPUT: ${localout[$i]}/.... to"
	3107	printf "\n $tmp_data_catalog/${frelout[$i]} (temporary data catalog)\n"
	3108	mkdir $tmp_data_catalog/${frelout[$i]}
[149]	3109	cd ${localout[$i]}
	3110	for file in $(ls *)
	3111	do
	3112	ln -f $file $tmp_data_catalog/${frelout[$i]}
	3113	done
	3114	cd $TEMPDIR
[1]	3115	fi
	3116
	3117
	3118	# ARCHIVIERUNGSJOB WIRD ERZEUGT UND ABGESCHICKT
	3119	if [[ $store_on_archive_system = true ]]
	3120	then
	3121
	3122	if [[ $archive_system = asterix ]]
	3123	then
	3124	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3125	if [[ $files_for_pes = false ]]
	3126	then
	3127	echo "stageout ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3128	else
	3129	echo "stageout -t ${frelout[$i]} > STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3130	fi
	3131	echo "cat STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3132	echo "if [[ \$(grep -c \"st.msg:150\" STAGE_OUTPUT${i}_$kennung) != 0 ]]" >> archive_${frelout[$i]}
	3133	echo "then" >> archive_${frelout[$i]}
	3134	echo " do_stageout=false" >> archive_${frelout[$i]}
	3135	echo "else" >> archive_${frelout[$i]}
	3136	echo " echo \" +++ $filetyp ${frelout[$i]} could not be stored on archive-system\" " >> archive_${frelout[$i]}
	3137	echo " cat /dev/null > ~/job_queue/ARCHIVE_ERROR_$fname" >> archive_${frelout[$i]}
	3138	echo " cat STAGE_OUTPUT${i}_$kennung > ~/job_queue/archive_${frelout[$i]}_error" >> archive_${frelout[$i]}
	3139	echo " echo \" *** $filetyp ${frelout[$i]} will be copied to \$WORK as backup\" " >> archive_${frelout[$i]}
	3140	if [[ $files_for_pes = false ]]
	3141	then
	3142	echo " cp ${frelout[$i]} \$WORK" >> archive_${frelout[$i]}
	3143	else
	3144	echo " cp -r ${frelout[$i]} \$WORK/${frelout[$i]}" >> archive_${frelout[$i]}
	3145	fi
	3146	echo " echo \" *** $filetyp ${frelout[$i]} saved\" " >> archive_${frelout[$i]}
	3147	echo "fi" >> archive_${frelout[$i]}
	3148	echo "rm STAGE_OUTPUT${i}_$kennung" >> archive_${frelout[$i]}
	3149	elif [[ $archive_system = DMF ]]
	3150	then
	3151	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3152	if [[ $files_for_pes = false ]]
	3153	then
	3154	printf "\n +++ archiving of single files impossible with $archive_system !\n"
	3155	locat=DMF
	3156	exit
	3157	else
	3158	# FUER RECHNER IN JUELICH. DORT KOENNTEN AUCH
	3159	# EINZELNE DATEIEN GESICHERT WERDEN (SPAETER KORR.)
	3160	echo "rm -rf \$ARCHIVE/${frelout[$i]}" >> archive_${frelout[$i]}
	3161	echo "cp -r ${frelout[$i]} \$ARCHIVE" >> archive_${frelout[$i]}
	3162	fi
	3163	elif [[ $archive_system = tivoli ]]
	3164	then
	3165	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3166	if [[ $files_for_pes = false ]]
	3167	then
	3168	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3169	echo "set -x" >> archive_${frelout[$i]}
	3170	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3171	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3172	else
	3173
	3174	echo "set -x" >> archive_${frelout[$i]}
	3175	echo "rm -rf \$PERM/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3176	echo "[[ ! -d \$PERM/${frelout[$i]} ]] && mkdir $PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3177	cd $tmp_data_catalog
	3178	all_files=`ls -1 ${frelout[$i]}/*`
	3179	cd - > /dev/null
	3180	(( inode = 0 ))
	3181	(( tp1 = tasks_per_node + 1 ))
	3182	while (( inode < nodes ))
	3183	do
	3184	# echo "*** all_files = \"$all_files\" "
	3185	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3186	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3187	# echo "*** tasks_per_node = \"$tasks_per_node\" "
	3188	# echo "*** files = \"$files\" "
	3189	# echo "*** all_files = \"$all_files\" "
	3190	echo "tar cvf \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3191	echo "dsmc incremental \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3192	echo "dsmmigrate \$PERM/${frelout[$i]}/${frelout[$i]}.node_$inode.tar" >> archive_${frelout[$i]}
	3193	(( inode = inode + 1 ))
	3194	done
	3195	# echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3196	# echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3197	fi
	3198	elif [[ $archive_system = ut ]]
	3199	then
	3200	echo "cd $tmp_data_catalog" >> archive_${frelout[$i]}
	3201	if [[ $files_for_pes = false ]]
	3202	then
	3203	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3204	echo "set -x" >> archive_${frelout[$i]}
	3205	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3206	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3207	else
	3208
	3209	echo "set -x" >> archive_${frelout[$i]}
	3210	echo "rm -rf \$UT/${frelout[$i]}/*" >> archive_${frelout[$i]}
	3211	echo "[[ ! -d \$UT/${frelout[$i]} ]] && mkdir $UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3212	cd $tmp_data_catalog
	3213	all_files=`ls -1 ${frelout[$i]}/*`
	3214	cd - > /dev/null
	3215	(( inode = 0 ))
	3216	(( tp1 = tasks_per_node + 1 ))
	3217	while (( inode < nodes ))
	3218	do
	3219	files=`echo $all_files \| cut -d" " -f1-$tasks_per_node`
	3220	all_files=`echo $all_files \| cut -d" " -f$tp1-`
	3221	echo "tar cvf \$UT/${frelout[$i]}/${frelout[$i]}.node_$inode.tar $files" >> archive_${frelout[$i]}
	3222	(( inode = inode + 1 ))
	3223	done
	3224	fi
	3225	elif [[ $archive_system = none ]]
	3226	then
	3227	printf " +++ archiving on $localhost not available!\n"
	3228	fi
	3229
	3230	if [[ $archive_system != none ]]
	3231	then
	3232	if [[ $localhost = ibmh \|\| $localhost = ibmb ]]
	3233	then
[97]	3234	# subjob -d -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
	3235	subjob -v -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
[1]	3236	elif [[ $localhost = nech ]]
	3237	then
[82]	3238	subjob -d -c /pf/b/$usern/job_queue -v -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3239	fi
	3240	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3241	fi
	3242	else
	3243	printf " +++ caution: option -A is switched on. No archiving on $archive_system!\n"
	3244	fi
	3245
	3246
	3247	# LEERDATEI IM BENUTZERVERZEICHNIS ANLEGEN, DAMIT BEKANNT IST,
	3248	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3249	if [[ $files_for_pes = false ]]
	3250	then
	3251	cat /dev/null > ${pathout[$i]}
	3252	else
	3253	mkdir -p ${pathout[$i]}
	3254	fi
	3255
	3256	fi
	3257
	3258
	3259	# KOPIEREN AUF LOKALER MASCHINE ZUM ARCHIV-SYSTEM
	3260	# AUSSERDEM MUSS LEERDATEI ANGELEGT WERDEN, DAMIT BEKANNT IST,
	3261	# WIE DIE HOECHSTE ZYKLUSNUMMER AUF DEM ARCHIV-SYSTEM LAUTET
	3262	# FALLS IRGENDEINE (VON MEHREREN) ARCHIVIERUNGEN SCHIEF GEHT,
	3263	# WIRD FLAG GESETZT UND BLEIBT AUCH BEI WEITEREN ORDNUNGS-
	3264	# GEMAESSEN ARCHIVIERUNGEN GESETZT
	3265	if [[ "${actionout[$i]}" = ar ]]
	3266	then
	3267	if [[ $files_for_pes = false ]]
	3268	then
	3269	printf "\n >>> OUTPUT: ${localout[$i]} to"
	3270	printf "\n ${pathout[$i]}"
	3271	printf "\n File will be copied to archive-system ($archive_system) !\n"
	3272	else
	3273	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to"
	3274	printf "\n ${pathout[$i]}"
	3275	printf "\n Directory will be copied to archive-system ($archive_system) !\n"
	3276	fi
	3277	mv ${localout[$i]} ${frelout[$i]}
	3278
	3279	file_saved=false
	3280
	3281	if [[ $archive_system = asterix ]]
	3282	then
	3283	do_stageout=true
	3284	(( stageout_anz = 0 ))
	3285	while [[ $do_stageout = true ]]
	3286	do
	3287	if [[ $files_for_pes = false ]]
	3288	then
	3289	stageout ${frelout[$i]} > STAGE_OUTPUT
	3290	else
	3291	stageout -t ${frelout[$i]} > STAGE_OUTPUT
	3292	fi
	3293	cat STAGE_OUTPUT
	3294	if [[ $(grep -c "st.msg:150" STAGE_OUTPUT) != 0 ]]
	3295	then
	3296	file_saved=true
	3297	do_stageout=false
	3298	else
	3299	if [[ $files_for_pes = false ]]
	3300	then
	3301	printf "\n +++ file ${frelout[$i]} could not be saved on archive-system"
	3302	else
	3303	printf "\n +++ directory ${frelout[$i]} could not be saved on archive-system"
	3304	fi
	3305	(( stageout_anz = stageout_anz + 1 ))
	3306	if (( stageout_anz == 10 ))
	3307	then
	3308	printf "\n +++ stoped after 10 unsuccessful tries!"
	3309	archive_save=false
	3310	do_stageout=false
	3311	else
	3312	printf "\n *** new try to store on archive after 15 min:"
	3313	sleep 900
	3314	fi
	3315	fi
	3316	done
	3317	elif [[ $archive_system = DMF ]]
	3318	then
	3319	if [[ $files_for_pes = false ]]
	3320	then
	3321	printf "\n +++ archiving of single files impossible on $archive_system!\n"
	3322	locat=DMF
	3323	exit
	3324	else
	3325	rm -rf $ARCHIVE/${frelout[$i]}
	3326	cp -r ${frelout[$i]} $ARCHIVE
	3327	fi
	3328	file_saved=true
	3329	elif [[ $archive_system = tivoli ]]
	3330	then
	3331	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3332	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3333	# GELEGT WERDEN
	3334	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3335	chmod g+rx $tmp_data_catalog
	3336	if [[ $files_for_pes = false ]]
	3337	then
	3338	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3339	else
	3340	mkdir $tmp_data_catalog/${frelout[$i]}
	3341	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3342	fi
	3343
	3344	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3345	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3346	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3347	if [[ $files_for_pes = false ]]
	3348	then
	3349	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3350	echo "rm -rf \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3351	echo "cp ${frelout[$i]} \$PERM/${frelout[$i]}" >> archive_${frelout[$i]}
	3352	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3353	else
	3354	echo "rm -rf \$PERM/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3355	echo "tar cvf \$PERM/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3356	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3357	fi
	3358
[97]	3359	subjob -v -d -q cdata -X 0 -m 1000 -t 43200 archive_${frelout[$i]}
[1]	3360	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3361	file_saved=true
	3362
	3363	elif [[ $archive_system = ut ]]
	3364	then
	3365	# ARCHIVIERUNG NUR PER BATCH-JOB MOEGLICH
	3366	# DATEI MUSS ZWISCHENZEITLICH INS TEMPORAERE DATENVERZEICHNIS
	3367	# GELEGT WERDEN
	3368	[[ ! -d $tmp_data_catalog ]] && mkdir -p $tmp_data_catalog
	3369	chmod g+rx $tmp_data_catalog
	3370	if [[ $files_for_pes = false ]]
	3371	then
	3372	ln -f ${frelout[$i]} $tmp_data_catalog/${frelout[$i]}
	3373	else
	3374	mkdir $tmp_data_catalog/${frelout[$i]}
	3375	ln -f ${frelout[$i]}/* $tmp_data_catalog/${frelout[$i]}
	3376	fi
	3377
	3378	# BATCH JOB GENERIEREN UND ABSCHICKEN; DATEI MUSS WIEDER
	3379	# AUS TEMPORAEREM DATENVERZEICHNIS ENTFERNT WERDEN
	3380	echo "cd $tmp_data_catalog" > archive_${frelout[$i]}
	3381	if [[ $files_for_pes = false ]]
	3382	then
	3383	# EVENTUELL NOCH VORHANDENE DATEI IM ARCHIV LOSCHEN
	3384	echo "rm -rf \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3385	echo "cp ${frelout[$i]} \$UT/${frelout[$i]}" >> archive_${frelout[$i]}
	3386	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3387	else
	3388	echo "rm -rf \$UT/${frelout[$i]}.tar" >> archive_${frelout[$i]}
	3389	echo "tar cvf \$UT/${frelout[$i]}.tar ${frelout[$i]}" >> archive_${frelout[$i]}
	3390	echo "rm -rf ${frelout[$i]}" >> archive_${frelout[$i]}
	3391	fi
	3392
[82]	3393	subjob -v -c /pf/b/$usern/job_queue -d -q pp -X 0 -m 1000 -t 7200 archive_${frelout[$i]}
[1]	3394	printf " Archiving of $tmp_data_catalog/${frelout[$i]} initiated (batch job submitted)\n"
	3395	file_saved=true
	3396
	3397	else
	3398	printf "\n +++ archive_system=\"$archive_system\" archiving impossible!"
	3399	archive_save=false
	3400	fi
	3401	if [[ $file_saved = true ]]
	3402	then
	3403	if [[ $files_for_pes = false ]]
	3404	then
	3405	cat /dev/null > ${pathout[$i]}
	3406	else
	3407	mkdir -p ${pathout[$i]}
	3408	fi
	3409	fi
	3410	fi
	3411
	3412	# APPEND AUF LOKALER MASCHINE
	3413	if [[ "${actionout[$i]}" = "a" ]]
	3414	then
	3415	printf "\n >>> OUTPUT: ${localout[$i]} append to ${pathout[$i]}\n"
	3416	cat ${localout[$i]} >> ${pathout[$i]}
	3417	fi
	3418
	3419	# KOPIEREN AUF LOKALER MASCHINE
	3420	# ES MUSS KOPIERT WERDEN, DA MOVE NICHT UEBER FILESYSTEM HINAUS MOEGLICH
	3421	if [[ "${actionout[$i]}" = "" && $files_for_pes = false ]]
	3422	then
	3423
	3424	# KOPIEREN AUF EINPROZESSORMASCHINE
[5]	3425	if [[ "${extout[$i]}" != " " && "${extout[$i]}" != "" ]]
[1]	3426	then
	3427	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}.${extout[$i]}\n"
[149]	3428	if [[ $link_local_output = true ]]
	3429	then
	3430	printf " using ln -f\n"
	3431	ln -f ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3432	fi
	3433	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3434	if [[ ! -f "${pathout[$i]}.${extout[$i]}" ]]
	3435	then
	3436	if [[ $link_local_output = true ]]
	3437	then
	3438	printf " ln failed, using cp...\n"
	3439	fi
	3440	cp ${localout[$i]} ${pathout[$i]}.${extout[$i]}
	3441	fi
[1]	3442	else
	3443	printf "\n >>> OUTPUT: ${localout[$i]} to ${pathout[$i]}\n"
[149]	3444	if [[ $link_local_output = true ]]
	3445	then
	3446	printf " using ln -f\n"
	3447	ln -f ${localout[$i]} ${pathout[$i]}
	3448	fi
	3449	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp"
	3450	if [[ ! -f "${pathout[$i]}" ]]
	3451	then
	3452	if [[ $link_local_output = true ]]
	3453	then
	3454	printf " ln failed, using cp...\n"
	3455	fi
	3456	cp ${localout[$i]} ${pathout[$i]}
	3457	fi
[1]	3458	fi
	3459
	3460	elif [[ "${actionout[$i]}" = "" && $files_for_pes = true ]]
	3461	then
	3462
	3463	# DIE DEN PROZESSOREN EINES PARALLELRECHNERS ZUGEHOERIGEN
	3464	# DATEIEN WERDEN ERST IN EINEM KATALOG GESAMMELT UND DIESER
	3465	# WIRD DANN KOPIERT
	3466	# PER MOVE UMBENANNT WERDEN
	3467	printf "\n >>> OUTPUT: ${localout[$i]}/_.... to ${pathout[$i]}\n"
[149]	3468	if [[ $link_local_output = true ]]
	3469	then
	3470	printf " using ln -f\n"
	3471	mkdir ${pathout[$i]}
	3472	cd ${localout[$i]}
	3473	for file in $(ls *)
	3474	do
	3475	ln -f $file ${pathout[$i]}
	3476	done
	3477	cd $TEMPDIR
	3478	fi
	3479	# If "ln -f" fails of if "$link_local_output = false" do a normal "cp -r"
	3480	if [[ ! -f "${pathout[$i]}/_0000" ]]
	3481	then
	3482	if [[ $link_local_output = true ]]
	3483	then
	3484	printf " ln failed for .../_0000, using cp...\n"
	3485	fi
	3486	cp -r ${localout[$i]} ${pathout[$i]}
	3487	fi
[1]	3488
	3489	fi
	3490	fi
	3491	done
	3492	if (( i != 0 ))
	3493	then
	3494	if [[ $transfer_problems = true ]]
	3495	then
	3496	printf "\n$striche\n *** OUTPUT-files saved"
	3497	printf "\n +++ WARNING: some data transfers failed! \n"
	3498	else
	3499	printf "\n$striche\n *** all OUTPUT-files saved \n"
	3500	fi
	3501	fi
	3502
	3503
	3504	# EVENTUELL FOLGEJOB STARTEN
	3505	# DATEI CONTINUE_RUN MUSS VOM BENUTZERPROGRAMM AUS ERZEUGT WERDEN
	3506	if [[ -f CONTINUE_RUN ]]
	3507	then
	3508
	3509	if [[ $archive_save = true ]]
	3510	then
	3511
	3512	# ZUERST IN MRUN-AUFRUF OPTIONEN FUER FORTSETZUNGSLAUF, FUER
	3513	# STILLES ABARBEITEN (OHNE INTERAKTIVE RUECKFAGEN) UND FUER
	3514	# BATCH-BETRIEB (NUR WICHTIG, FALLS BATCH AUF LOKALER MASCHINE
	3515	# DURCHGEFUEHRT WERDEN SOLL) EINFUEGEN, FALLS NICHT BEREITS VOR-
	3516	# HANDEN
	3517	[[ $(echo $mc \| grep -c "\-C") = 0 ]] && mc="$mc -C"
	3518	[[ $(echo $mc \| grep -c "\-v") = 0 ]] && mc="$mc -v"
	3519	[[ $(echo $mc \| grep -c "\-b") = 0 ]] && mc="$mc -b"
	3520	if [[ $(echo $mc \| grep -c "#") != 0 ]]
	3521	then
	3522	mc=`echo $mc \| sed 's/#/f/g'`
	3523	fi
	3524
	3525
	3526	# JOB STARTEN
	3527	printf "\n\n *** initiating restart-run on \"$return_addres\" using command:\n"
	3528	echo " $mc"
	3529	printf "\n$striche\n"
	3530	if [[ $localhost != $fromhost ]]
	3531	then
	3532
	3533	if [[ $localhost = nech \|\| $localhost = ibmb \|\| $localhost = ibmh \|\| $localhost = ibms \|\| $localhost = lctit ]]
	3534	then
	3535	echo "*** ssh will be used to initiate restart-runs!"
	3536	echo " return_addres=\"$return_addres\" "
	3537	echo " return_username=\"$return_username\" "
	3538	if [[ $return_addres = 172.20.25.41 ]]
	3539	then
	3540	# WORKAROUND AUF SCIROCCO AM TIT
[33]	3541	print "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc " \| ssh $return_addres -l $return_username
[1]	3542	else
[33]	3543	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
[1]	3544	fi
	3545	else
	3546	printf "\n +++ no restart mechanism available for host \"$localhost\" "
	3547	locat=restart; exit
	3548	fi
	3549
	3550	# WARTEN, DAMIT SICH RESTART JOB IN QUEUE EINREIHEN KANN, BEVOR
	3551	# DER AKTUELLE JOB ENDET
	3552	sleep 30
	3553
	3554	else
	3555
	3556	# BEI RECHNUNGEN AUF LOKALER MASCHINE KANN MRUN DIREKT AUFGE-
[108]	3557	# RUFEN WERDEN, AUSSER AUF lcfimm
[1]	3558	cd $LOCAL_PWD
[108]	3559	if [[ $localhost = lcfimm ]]
	3560	then
	3561	ssh $return_addres -l $return_username "PATH=\$PATH:$LOCAL_MRUN_PATH;export PALM_BIN=$LOCAL_MRUN_PATH;cd $LOCAL_PWD; $mc "
	3562	else
	3563	eval $mc # ' MUESSEN AUSGEWERTET WERDEN
	3564	fi
[1]	3565	cd - > /dev/null
	3566	fi
	3567	printf "\n$striche\n *** restart-run initiated \n"
	3568
	3569
	3570	# EVENTUELL INPUT-DATEIEN, DIE VON TEMPORAEREM DATENVERZEICHNIS
	3571	# GEHOLT WORDEN SIND, LOESCHEN
	3572	(( i = 0 ))
	3573	while (( i < iin ))
	3574	do
	3575	(( i = i + 1 ))
	3576	if [[ "${got_tmp[$i]}" = true && $keep_data_from_previous_run = false ]]
	3577	then
	3578	rm -r $tmp_data_catalog/${frelin[$i]}
	3579	fi
	3580	done
	3581
	3582	else
	3583
	3584	printf "\n +++ no restart-run possible, since errors occured"
	3585	printf "\n during the archive process"
	3586	fi
	3587
	3588	fi
	3589
	3590
	3591
	3592	# EVTL. EMAIL-BENACHRICHTIGUNG UEBER ABGESCHLOSSENEN LAUF
	3593	if [[ "$email_notification" != "" ]]
	3594	then
	3595
	3596	if [[ $localhost != $fromhost ]]
	3597	then
	3598	if [[ -f CONTINUE_RUN ]]
	3599	then
	3600	echo "PALM restart run necessary" > email_text
	3601	echo "description header of actual run:" >> email_text
	3602	cat CONTINUE_RUN >> email_text
	3603	echo "mrun-command to restart:" >> email_text
	3604	echo "$mc" >> email_text
	3605	else
	3606	echo "PALM run with base filename \"$fname\" on host \"$localhost\" finished" > email_text
	3607	fi
	3608	mail $email_notification < email_text
	3609	printf "\n *** email notification sent to \"$email_notification\" "
	3610	fi
	3611	fi
	3612
	3613
	3614
	3615	# ALLE ARBEITEN BEENDET. TEMPORAERER KATALOG KANN GELOESCHT WERDEN
	3616	cd $HOME
	3617	[[ $delete_temporary_catalog = true ]] && rm -rf $TEMPDIR
	3618
	3619	else
	3620
	3621
	3622	# FALLS AUF REMOTE-MASCHINE GERECHNET WERDEN SOLL, WERDEN JETZT ENTSPRE-
	3623	# CHENDE AKTIONEN DURCHGEFUEHRT
	3624
	3625	# MRUN-BEFEHL FUER REMOTE-MASCHINE ZUSAMMENSTELLEN
[82]	3626	mrun_com="$mrun_script_name -a $afname -c $config_file -d $fname -h $host -H $fromhost -m $memory -t $cpumax -q $queue -R $return_addres -U $return_username -u $remote_username"
[1]	3627	[[ "$cpp_opts" != "" ]] && mrun_com=${mrun_com}" -D \"$cpp_opts\""
[79]	3628	[[ "$global_revision" != "" ]] && mrun_com=${mrun_com}" -G \"$global_revision\""
[123]	3629	[[ $group_number != none ]] && mrun_com=${mrun_com}" -g $group_number"
[1]	3630	[[ $do_compile = true ]] && mrun_com=${mrun_com}" -s \"$source_list\""
	3631	[[ "$input_list" != "" ]] && mrun_com=${mrun_com}" -i \"$input_list\""
	3632	[[ $ignore_archive_error = true ]] && mrun_com=${mrun_com}" -I"
	3633	[[ $keep_data_from_previous_run = true ]] && mrun_com=${mrun_com}" -k"
	3634	[[ "$additional_conditions" != "" ]] && mrun_com=${mrun_com}" -K \"$additional_conditions\""
	3635	# [[ "$makefile" != "$source_path/Makefile" ]] && mrun_com=${mrun_com}" -M \"$makefile\""
	3636	[[ "$output_list" != "" ]] && mrun_com=${mrun_com}" -o \"$output_list\""
	3637	[[ "$read_from_config" = false ]] && mrun_com=${mrun_com}" -S"
	3638	[[ $do_trace = true ]] && mrun_com=${mrun_com}" -x"
	3639	[[ "$numprocs" != "" ]] && mrun_com=${mrun_com}" -X $numprocs"
	3640	if [[ $use_openmp = true ]]
	3641	then
	3642	mrun_com=${mrun_com}" -O"
	3643	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $threads_per_task"
	3644	else
	3645	[[ "$tasks_per_node" != "" ]] && mrun_com=${mrun_com}" -T $tasks_per_node"
	3646	fi
	3647	[[ $store_on_archive_system = false ]] && mrun_com=${mrun_com}" -A"
	3648	[[ $package_list != "" ]] && mrun_com=${mrun_com}" -p \"$package_list\""
	3649	[[ $return_password != "" ]] && mrun_com=${mrun_com}" -P $return_password"
	3650	[[ $delete_temporary_catalog = false ]] && mrun_com=${mrun_com}" -B"
[127]	3651	[[ $node_usage != default && "$(echo $node_usage \| cut -c1-3)" != "sla" && $node_usage != novice ]] && mrun_com=${mrun_com}" -n $node_usage"
[102]	3652	[[ $run_coupled_model = true ]] && mrun_com=${mrun_com}" -Y"
[1]	3653	if [[ $do_remote = true ]]
	3654	then
	3655	printf "\n>>>> MRUN-command on execution host:\n>>>> $mrun_com \n"
	3656	fi
	3657
	3658
	3659	# ZUSAMMENSTELLUNG DES JOBSCRIPTS AUF DATEI jobfile
	3660	jobfile=jobfile.$RANDOM
	3661
	3662
	3663	# TEMPORAERES VERZEICHNIS GENERIEREN UND NACH DORT WECHSELN
	3664	echo "mkdir $TEMPDIR" >> $jobfile
	3665	echo "cd $TEMPDIR" >> $jobfile
	3666
	3667
	3668	# EVENTUELL FEHLERVERFOLGUNG AKTIVIEREN
	3669	if [[ $do_trace = true ]]
	3670	then
	3671	echo "set -x" >> $jobfile
	3672	else
	3673	echo "set +vx" >> $jobfile
	3674	fi
	3675
	3676
	3677	# ABSPEICHERN DER QUELLTEXTE (NUR FALLS UEBERSETZT WERDEN SOLL)
	3678	# SOWIE GEGEBENENFALLS DES MAKEFILES
	3679	if [[ $do_compile = true ]]
	3680	then
	3681
	3682	source_catalog=SOURCES_FOR_RUN_$fname
	3683
	3684	# UNTERVERZEICHNIS FUER QUELLTEXTE UND MAKEFILE ANLEGEN
	3685	# MRUN WIRD DIESES VRZEICHNIS UEBER ENVIRONMENT VARIABLE
	3686	# MITGETEILT (UEBERSTEUERT ANGABE IN KONFIGURATIONSDATEI)
	3687	echo "mkdir SOURCES_FOR_RUN_$fname" >> $jobfile
	3688	echo "export SOURCES_COMPLETE=true" >> $jobfile
	3689	echo "cd SOURCES_FOR_RUN_$fname" >> $jobfile
	3690
	3691	for filename in $source_list
	3692	do
	3693	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3694	echo "cat > $filename << \"%END%\"" >> $jobfile
	3695	cat $source_catalog/$filename >> $jobfile
	3696	echo " " >> $jobfile
	3697	echo "%END%" >> $jobfile
	3698	echo " " >> $jobfile
	3699	done
	3700
[82]	3701	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3702	echo "cat > Makefile << \"%END%\"" >> $jobfile
	3703	cat $source_catalog/Makefile >> $jobfile
	3704	echo " " >> $jobfile
	3705	echo "%END%" >> $jobfile
	3706	echo " " >> $jobfile
[1]	3707
	3708	echo "cd - > /dev/null" >> $jobfile
	3709
	3710	fi
	3711
	3712
	3713	# ABSPEICHERN DER KONFIGURATIONSDATEI
	3714	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3715	echo "cat > $config_file << \"%END%\"" >> $jobfile
	3716	cat $config_file >> $jobfile
	3717	echo "%END%" >> $jobfile
	3718	echo " " >> $jobfile
	3719
	3720
	3721	# ABSPEICHERN DER AKTUELLEN MRUN-VERSION
	3722	# ABDECKZEICHEN VERHINDERN, DASS ERSETZUNGEN ERFOLGEN
	3723	echo "cat > $mrun_script_name <<\"%END%\"" >> $jobfile
[22]	3724	cat ${PALM_BIN}/$mrun_script_name >> $jobfile
[1]	3725	echo "%END%" >> $jobfile
	3726	if [[ $host = lctit ]]
	3727	then
	3728	echo "sed 's/bin\/ksh/home2\/usr5\/mkanda\/pub\/ksh/' < $mrun_script_name > mrun_new" >> $jobfile
	3729	echo "mv mrun_new $mrun_script_name" >> $jobfile
	3730	fi
	3731	echo "chmod u+x $mrun_script_name" >> $jobfile
	3732	echo "execute_mrun=true" >> $jobfile
	3733	echo " " >> $jobfile
	3734
	3735	# EVTL. BENOETIGTE INPUT-DATEIEN PER FTP HOLEN ODER DEM JOB DIREKT
	3736	# MITGEBEN UND AUF DEM REMOTE-RECHNER IM BENUTZERVERZEICHNIS ABLEGEN
	3737	# FALLS DIESES NICHT EXISTIERT, WIRD VERSUCHT, DAS JEWEILS LETZTE
	3738	# UNTERVERZEICHNIS DES PFADNAMENS ANZULEGEN
	3739	if [[ $do_remote = true ]]
	3740	then
	3741	(( i = 0 ))
	3742	while (( i < iin ))
	3743	do
	3744	(( i = i + 1 ))
	3745	echo "[[ ! -d ${pathin[$i]} ]] && mkdir -p ${pathin[$i]}" >> $jobfile
	3746	if [[ "${transin[$i]}" = job ]]
	3747	then
	3748	echo "cat > ${remotepathin[$i]} <<\"%END%\"" >> $jobfile
	3749	eval cat ${pathin[$i]}/${frelin[$i]} >> $jobfile
	3750	echo " " >> $jobfile
	3751	echo "%END%" >> $jobfile
	3752	else
[82]	3753	echo "batch_scp -b -o -g -s -u $return_username $return_addres ${remotepathin[$i]} \"${pathin[$i]}\" ${frelin[$i]}" >> $jobfile
[1]	3754	fi
	3755
	3756	# UEBERPRUEFEN, OB DATEI ANGELEGT WERDEN KONNTE
	3757	echo "if [[ \$? = 1 ]]" >> $jobfile
	3758	echo "then" >> $jobfile
	3759	echo " echo \" \" " >> $jobfile
	3760	echo " echo \"+++ file ${remotepathin[$i]} could not be created\" " >> $jobfile
	3761	echo " echo \" please check, if directory exists on $host!\" " >> $jobfile
	3762	echo " echo \"+++ MRUN will not be continued\" " >> $jobfile
	3763	echo " execute_mrun=false" >> $jobfile
	3764	echo "fi" >> $jobfile
	3765	done
	3766	fi
	3767
	3768	# ARBEITSKATALOG AUF DER LOKALEN MASCHINE FUER EVENTUELLE
	3769	# FORTSETZUNGSLAUEFE PER ENV-VARIABLE UEBERGEBEN
	3770	echo "LOCAL_PWD=$working_directory" >> $jobfile
	3771	echo "export LOCAL_PWD" >> $jobfile
	3772
	3773	# EBENSO LOKALEN MRUN-KATALOG UEBERGEBEN
[22]	3774	echo "LOCAL_MRUN_PATH=$PALM_BIN" >> $jobfile
[1]	3775	echo "export LOCAL_MRUN_PATH" >> $jobfile
	3776
[66]	3777	# WORKAROUND FUER RIAM-NEC-JOBS WEGEN PROFILE-SCHWIERIGKEITEN
[69]	3778	if [[ $localhost_realname = "gate" \|\| $localhost = lctit ]]
[66]	3779	then
	3780	echo "export PALM_BIN=$PALM_BIN" >> $jobfile
	3781	fi
[1]	3782
	3783	# MRUN AUF ZIELRECHNER AUFRUFEN
	3784	echo "set -x" >> $jobfile
	3785	echo "[[ \$execute_mrun = true ]] && ./$mrun_com" >> $jobfile
	3786
	3787	echo 'ls -al; echo `pwd`' >> $jobfile
	3788	echo "cd \$HOME" >> $jobfile
	3789	echo "rm -rf $TEMPDIR" >> $jobfile
	3790
	3791
	3792
	3793
	3794	# JOB PER SUBJOB STARTEN
	3795	if [[ $silent = false ]]
	3796	then
	3797	printf "\n "
	3798	else
	3799	printf "\n\n"
	3800	fi
	3801
[122]	3802	subjob $job_on_file -h $host -u $remote_username -g $group_number -q $queue -m $memory -N $node_usage -t $cpumax $XOPT $TOPT $OOPT -n $fname -v $jobfile
[1]	3803	rm -rf $jobfile
	3804
	3805
	3806	fi # ENDE REMOTE-TEIL
	3807
	3808
	3809
	3810	# ENDE DER PROZEDUR

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