source: palm/trunk/SCRIPTS/.palm.config.crayb @ 3806

#$Id: .palm.config.crayb 3465 2018-10-30 18:26:17Z raasch $
#column 1          column 2
#name of variable  value of variable (~ must not be used)
#----------------------------------------------------------------------------
%base_data           ~/palm/current_version/JOBS
%base_directory      $HOME/palm/current_version
%source_path         $HOME/palm/current_version/trunk/SOURCE
%user_source_path    $base_directory/JOBS/$run_identifier/USER_CODE
%fast_io_catalog     /gfs2/tmp/<replace_by_your_HLRN_username>
%local_jobcatalog    /home/<replace_by_your_local_username>/job_logfiles
%remote_jobcatalog   /home/h/<replace_by_your_HLRN_username>/job_logfiles
#
%local_ip            130.75.105.106
%local_username      <replace_by_your_local_username>
%remote_ip           130.73.233.1
%remote_loginnode    blogin1
%remote_username     <replace_by_your_HLRN_username>
%ssh_key             id_rsa_hlrn
%defaultqueue        mpp2testq
%submit_command      /opt/moab/default/bin/msub -E
#
%compiler_name       ftn
%compiler_name_ser   ftn
%cpp_options         -e Z -DMPI_REAL=MPI_DOUBLE_PRECISION -DMPI_2REAL=MPI_2DOUBLE_PRECISION -D__parallel -D__netcdf -D__netcdf4 -D__netcdf4_parallel -D__fftw
%make_options        -j 4
%compiler_options    -em -O3 -hnoomp -hnoacc -hfp3 -hdynamic -K trap=fp
%linker_options      -em -O3 -hnoomp -hnoacc -hfp3 -hdynamic -dynamic -K trap=fp
%execute_command     aprun  -n {{mpi_tasks}}  -N {{tasks_per_node}}  palm
%execute_command_for_combine     aprun  -n 1  -N 1  ./combine_plot_fields.x
%memory              2300
%module_commands     module switch craype-ivybridge craype-haswell; module load fftw cray-hdf5-parallel cray-netcdf-hdf5parallel
#
#
# BATCH-directives to be used for batch jobs
BD:#!/bin/bash
BD:#PBS -A {{project_account}}
BD:#PBS -N {{run_id}}
BD:#PBS -l walltime={{cpu_hours}}:{{cpu_minutes}}:{{cpu_seconds}}
BD:#PBS -l nodes={{nodes}}:ppn={{tasks_per_node}}
BD:#PBS -o {{job_protocol_file}}
BD:#PBS -j oe
BD:#PBS -q {{queue}}
#

#
# BATCH-directives for batch jobs used to send back the jobfile from a remote to a local host
BDT:#!/bin/bash
BDT:#PBS -A {{project_account}}
BDT:#PBS -N job_protocol_transfer
BDT:#PBS -l walltime=00:30:00
BDT:#PBS -l nodes=1:ppn=1
BDT:#PBS -o {{job_transfer_protocol_file}}
BDT:#PBS -j oe
BDT:#PBS -q dataq
#
#----------------------------------------------------------------------------
# INPUT-commands, executed before running PALM - lines must start with "IC:" 
#----------------------------------------------------------------------------
IC:export ATP_ENABLED=1
IC:export MPICH_GNI_BTE_MULTI_CHANNEL=disabled
IC:ulimit  -s unlimited
#
#----------------------------------------------------------------------------
# ERROR-commands - executed when program terminates abnormally
#----------------------------------------------------------------------------
EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
#
#----------------------------------------------------------------------------
# OUTPUT-commands - executed when program terminates normally
#----------------------------------------------------------------------------
#
OC:echo \\\"PALM run with job id {{run_id}} finished\\\" | mail <replace_by_your_mail_address>