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source: palm/trunk/SCRIPTS/.mrun.config.lcxe6 @ 1332

Last change on this file since 1332 was 1241, checked in by heinze, 11 years ago

Nudging and large scale forcing from external file implemented
  • Property svn:keywords set to Id
File size: 12.2 KB
Line 
1#$Id: .mrun.config.lcxe6 1241 2013-10-30 11:36:58Z suehring $
2#column 1          column 2                                   column 3
3#name of variable  value of variable (~ must not be used)     scope
4#----------------------------------------------------------------------------
5%mainprog          palm.f90
6%base_directory    $HOME/palm/current_version
7%base_data         ~/palm/current_version/JOBS
8%source_path       $base_directory/trunk/SOURCE
9%add_source_path   $base_directory/USER_CODE/$fname
10%depository_path   $base_directory/MAKE_DEPOSITORY
11%use_makefile      true
12#
13# Enter your own host below by adding another line containing in the second
14# column your hostname (as provided by the unix command "hostname") and in the
15# third column the host identifier. Depending on your operating system, the
16# first characters of the host identifier should be "lc" (Linux cluster), "ibm"
17# (IBM-AIX), or "nec" (NEC-SX), respectively.
18#
19# The next line is just an example. Add your own line below or replace this line.
20%host_identifier   hexagon*  lcxe6
21#
22#
23# The next block contains all informations for compiling the PALM code
24# and for generating and running the PALM executable using MPI. Replace all
25# required paths (given in <>) by the respective paths valid on your host.
26# Also replace <hi> by your host identifier (see above) in each line!
27# Compilernames, cpp-options and compiler-options are assuming
28# an Intel-Compiler and mpich2 on this host! Please change
29# appropriately, if you are using a different compiler / MPI-Version.
30#
31# Additional hints: during mrun error messages will occur related to the
32# "module swap" command. You can simply ignore those messages. If you do not
33# know your project account, check the output of the "cost" command on hexagon
34#
35%tmp_user_catalog    /work/<replace by your CrayXE6 username>                                                         lcxe6 parallel
36%tmp_data_catalog    /work/<replace by your CrayXE6 username>/tmp/                                                    lcxe6 parallel
37%compiler_name       ftn                                                                                              lcxe6 parallel
38%compiler_name_ser   ftn                                                                                              lcxe6 parallel
39%cpp_options         -cpp:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__intel_openmp_bug lcxe6 parallel
40%netcdf_inc          -I:/opt/cray/netcdf-hdf5parallel/default/netcdf-hdf5parallel-intel/include:-I/opt/cray/hdf5-parallel/default/hdf5-parallel-intel/include  lcxe6 parallel
41%netcdf_lib          -L/opt/cray/netcdf-hdf5parallel/default/netcdf-hdf5parallel-intel/lib:-lnetcdf:-lnetcdff:-L/opt/cray/hdf5-parallel/default/hdf5-parallel-intel/lib:-lhdf5_fortran:-lhdf5hl_fortran  lcxe6 parallel
42%mopts               -j:4                                                                                             lcxe6 parallel
43%fopts               -r8:-O3:-nbs:-convert:little_endian:-I:/opt/cray/mpt/default/xt/gemini/mpich2-intel/120/include  lcxe6 parallel
44%lopts               -r8:-O3:-nbs:-L:/opt/cray/mpt/default/xt/gemini/mpich2-intel/120/lib                             lcxe6 parallel
45%remote_username      <replace by your CrayXE6 username>                                                              lcxe6 parallel
46%memory              1000                                                                                             lcxe6 parallel
47%project_account     <replace by your project account>                                                                lcxe6 parallel
48%modules             modules:Base-opts:pmi:hdf5-parallel:netcdf-hdf5parallel:xtpe-network-gemini:gni-headers          lcxe6 parallel
49%login_init_cmd      .:/opt/modules/default/init/ksh\;:.:/etc/bash.bashrc.local\;:module:swap:PrgEnv-cray:PrgEnv-intel\;:module:swap:cray-mpich2:xt-mpich2   lcxe6 parallel
50%email_notification  <replace by your email address>                                                                  lcxe6 parallel
51#             
52%write_binary        true                             restart
53#
54#----------------------------------------------------------------------------
55# INPUT-commands, executed before running PALM - lines must start with "IC:"
56#----------------------------------------------------------------------------
57#IC:
58#
59#----------------------------------------------------------------------------
60# ERROR-commands - executed when program terminates abnormally
61#----------------------------------------------------------------------------
62EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
63EC:pwd; ls -al
64#
65#----------------------------------------------------------------------------
66# OUTPUT-commands - executed when program terminates normally
67#----------------------------------------------------------------------------
68#
69# Combine 1D- and 3D-profile output (these files are not usable for plotting)
70OC:[[ -f LIST_PROFIL_1D     ]]  &&  cat  LIST_PROFIL_1D  >>  LIST_PROFILE
71OC:[[ -f LIST_PROFIL        ]]  &&  cat  LIST_PROFIL     >>  LIST_PROFILE
72#
73# Combine all particle information files
74OC:[[ -f PARTICLE_INFOS/_0000 ]]  &&  cat  PARTICLE_INFOS/* >> PARTICLE_INFO
75#
76#----------------------------------------------------------------------------
77# List of input-files
78#----------------------------------------------------------------------------
79PARIN                    in:job        d3#      $base_data/$fname/INPUT    _p3d
80PARIN                    in:job        d3f      $base_data/$fname/INPUT    _p3df
81TOPOGRAPHY_DATA          in:locopt     d3#:d3f  $base_data/$fname/INPUT    _topo
82NUDGING_DATA             in:locopt     d3#:d3f  $base_data/$fname/INPUT    _nudge
83LSF_DATA                 in:locopt     d3#:d3f  $base_data/$fname/INPUT    _lsf
84BININ                    in:loc:flpe   d3f      $base_data/$fname/RESTART  _d3d
85PARTICLE_RESTART_DATA_IN in:loc:flpe   prtf     $base_data/$fname/RESTART  _rprt
86DATA_1D_PR_NETCDF        in:locopt     prf      $base_data/$fname/OUTPUT   _pr     nc
87DATA_1D_SP_NETCDF        in:locopt     spf      $base_data/$fname/OUTPUT   _sp     nc
88DATA_1D_TS_NETCDF        in:locopt     tsf      $base_data/$fname/OUTPUT   _ts     nc
89DATA_1D_PTS_NETCDF       in:locopt     ptsf     $base_data/$fname/OUTPUT   _pts    nc
90DATA_2D_XY_NETCDF        in:locopt     xyf      $base_data/$fname/OUTPUT   _xy     nc
91DATA_2D_XY_AV_NETCDF     in:locopt     xyf      $base_data/$fname/OUTPUT   _xy_av  nc
92DATA_2D_XZ_NETCDF        in:locopt     xzf      $base_data/$fname/OUTPUT   _xz     nc
93DATA_2D_YZ_NETCDF        in:locopt     yzf      $base_data/$fname/OUTPUT   _yz     nc
94DATA_3D_NETCDF           in:locopt     3df      $base_data/$fname/OUTPUT   _3d     nc
95DATA_PRT_NETCDF          in:locopt:pe  prtf     $base_data/$fname/OUTPUT   _prt
96#
97#----------------------------------------------------------------------------
98# List of output-files
99#----------------------------------------------------------------------------
100BINOUT                    out:loc:flpe restart   $base_data/$fname/RESTART  _d3d
101PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART  _rprt
102#
103RUN_CONTROL       out:loc:tr   d3#     $base_data/$fname/MONITORING  _rc
104RUN_CONTROL       out:loc:tra  d3f     $base_data/$fname/MONITORING  _rc
105HEADER            out:loc:tr   d3#     $base_data/$fname/MONITORING  _header
106HEADER            out:loc:tra  d3f     $base_data/$fname/MONITORING  _header
107CPU_MEASURES      out:loc:tr   d3#     $base_data/$fname/MONITORING  _cpu
108CPU_MEASURES      out:loc:tra  d3f     $base_data/$fname/MONITORING  _cpu
109#
110DATA_1D_PR_NETCDF    out:loc:tr   pr#:prf   $base_data/$fname/OUTPUT  _pr     nc
111DATA_1D_SP_NETCDF    out:loc:tr   sp#:spf   $base_data/$fname/OUTPUT  _sp     nc
112DATA_1D_TS_NETCDF    out:loc:tr   ts#:tsf   $base_data/$fname/OUTPUT  _ts     nc
113DATA_1D_PTS_NETCDF   out:loc:tr   pts#:ptsf $base_data/$fname/OUTPUT  _pts    nc
114DATA_2D_XY_NETCDF    out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy     nc
115DATA_2D_XY_AV_NETCDF out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy_av  nc
116DATA_2D_XZ_NETCDF    out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz     nc
117DATA_2D_XZ_AV_NETCDF out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz_av  nc
118DATA_2D_YZ_NETCDF    out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz     nc
119DATA_2D_YZ_AV_NETCDF out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz_av  nc
120DATA_3D_NETCDF       out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d     nc
121DATA_3D_AV_NETCDF    out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d_av  nc
122DATA_MASK_01_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01     nc
123DATA_MASK_01_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01_av  nc
124DATA_MASK_02_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02     nc
125DATA_MASK_02_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02_av  nc
126DATA_MASK_03_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03     nc
127DATA_MASK_03_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03_av  nc
128DATA_MASK_04_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04     nc
129DATA_MASK_04_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04_av  nc
130DATA_MASK_05_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05     nc
131DATA_MASK_05_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05_av  nc
132DATA_MASK_06_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06     nc
133DATA_MASK_06_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06_av  nc
134DATA_MASK_07_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07     nc
135DATA_MASK_07_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07_av  nc
136DATA_MASK_08_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08     nc
137DATA_MASK_08_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08_av  nc
138DATA_MASK_09_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09     nc
139DATA_MASK_09_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09_av  nc
140DATA_MASK_10_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10     nc
141DATA_MASK_10_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10_av  nc
142DATA_MASK_11_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11     nc
143DATA_MASK_11_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11_av  nc
144DATA_MASK_12_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12     nc
145DATA_MASK_12_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12_av  nc
146DATA_MASK_13_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13     nc
147DATA_MASK_13_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13_av  nc
148DATA_MASK_14_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14     nc
149DATA_MASK_14_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14_av  nc
150DATA_MASK_15_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15     nc
151DATA_MASK_15_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15_av  nc
152DATA_MASK_16_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16     nc
153DATA_MASK_16_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16_av  nc
154DATA_MASK_17_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17     nc
155DATA_MASK_17_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17_av  nc
156DATA_MASK_18_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18     nc
157DATA_MASK_18_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18_av  nc
158DATA_MASK_19_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19     nc
159DATA_MASK_19_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19_av  nc
160DATA_MASK_20_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20     nc
161DATA_MASK_20_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20_av  nc
162DATA_PRT_NETCDF      out:loc:pe   prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
163DATA_PRT_NETCDF      out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
164DATA_DVR             out:loc:trpe dvr       $base_data/$fname/OUTPUT  _dvr
165#
166DVRP_LOG          out:loc:tr   dv#       $base_data/$fname/MONITORING  _dvrp_log
167DVRP_LOG          out:loc:tra  dvf       $base_data/$fname/MONITORING  _dvrp_log
168PARTICLE_INFO     out:loc:tr   pt#       $base_data/$fname/MONITORING  _prt_info
169PARTICLE_INFO     out:loc:tra  ptf       $base_data/$fname/MONITORING  _prt_info
170PARTICLE_DATA     out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT      _prt_dat
171# A BLANK LINE MUST FOLLOW
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