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source: palm/trunk/SCRIPTS/.mrun.config.imuk_hlrn @ 878

Last change on this file since 878 was 754, checked in by raasch, 13 years ago

debug block added to hlrn config file
File size: 11.1 KB
RevLine 
[346]1#column 1          column 2                                   column 3
2#name of variable  value of variable (~ must not be used)     scope
3#----------------------------------------------------------------------------
4%mainprog          palm.f90
[751]5%base_directory    $HOME/palm/current_version
6%base_data         ~/palm/current_version/JOBS
[346]7%source_path       $base_directory/trunk/SOURCE
8%add_source_path   $base_directory/USER_CODE/$fname
9%depository_path   $base_directory/MAKE_DEPOSITORY
10%use_makefile      true
11#
12# Enter your own host below by adding another line containing in the second
13# column your hostname (as provided by the unix command "hostname") and in the
14# third column the host identifier. Depending on your operating system, the
15# first characters of the host identifier should be "lc" (Linux cluster), "ibm"
16# (IBM-AIX), or "nec" (NEC-SX), respectively.
17%host_identifier   service100  lcsgih
18%host_identifier   r1*         lcsgih
19%host_identifier   h01*        lcsgih
20%host_identifier   r2*         lcsgib
21%host_identifier   b01*        lcsgib
[733]22%host_identifier   inferno     lcmuk
[346]23#
24# The following blocks contain all information for compiling the PALM code
25# and for generating and running the PALM executable using MPI. Replace all
26# required paths (given in <>) by the respective paths valid on your host.
[750]27# Please adjust compilernames, cpp-options, compiler-options etc.
[346]28# appropriately for your own system(s), and please delete or comment out
29# blocks for unused systems.
30#
31# The following 'lcmuk parallel' block assumes PALM compilation and execution
[733]32# on host inferno. Please note that other hosts within the IMUK linux cluster,
33# e.g. bora, may require different settings.
[346]34#
[750]35#%remote_username   <replace by your IMUK username>               lcmuk parallel
36#%tmp_user_catalog  /home/<replace by your IMUK username>/palm/tmp/  lcmuk parallel
[346]37%compiler_name     mpif90                                        lcmuk parallel
38%compiler_name_ser ifort                                         lcmuk parallel
[733]39%cpp_options       -DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf   lcmuk parallel
40%netcdf_inc        -I:/muksoft/packages/netcdf/3.6.3/include     lcmuk parallel
41%netcdf_lib        -L/muksoft/packages/netcdf/3.6.3/lib:-lnetcdf lcmuk parallel
[503]42%mopts             -j:4                                          lcmuk parallel
[733]43%fopts             -openmp:-xS:-fpe0:-O3:-cpp:-r8:-fp-model:precise:-align:all:-ftz:-fno-alias:-no-scalar-rep:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-convert:little_endian     lcmuk parallel
44%lopts             -openmp:-xS:-fpe0:-O3:-cpp:-r8:-fp-model:precise:-align:all:-ftz:-fno-alias:-no-scalar-rep:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-Vaxlib                    lcmuk parallel
[346]45#%hostfile          $base_directory/.hostfile                    lcmuk parallel
46#
47#
[753]48%sgi_feature       ice2                                       lcsgih parallel
49%modules           intel.compiler/11.1.072:mpt:phdf5/1.8.5-mpt-intel-11.1:pnetcdf/4.1.1-mpt-intel-11.1  lcsgih parallel
50#%remote_username    <replace by your HLRN username>          lcsgih parallel
51%compiler_name     ifort                                      lcsgih parallel
52%compiler_name_ser ifort                                      lcsgih parallel
53%cpp_options       -DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__mpi2   lcsgih parallel
54%netcdf_inc        -I:/sw/dataformats/pnetcdf/netcdf-4.1.1-mpt-intel-11.1/include:-I:/sw/dataformats/phdf5/hdf5-1.8.5-mpt-intel-11.1/include    lcsgih parallel
55%netcdf_lib        -L/sw/dataformats/pnetcdf/netcdf-4.1.1-mpt-intel-11.1/lib:-lnetcdf:-lnetcdff:-L/sw/dataformats/phdf5/hdf5-1.8.5-mpt-intel-11.1/lib:-lhdf5:-lhdf5_hl:-lz      lcsgih parallel
56%mopts             -j:4                                       lcsgih parallel
57%fopts             -openmp:-xS:-fpe0:-O3:-cpp:-r8:-fp-model:precise:-align:all:-ftz:-fno-alias:-no-scalar-rep:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-convert:little_endian  lcsgih parallel
58%lopts             -openmp:-xS:-fpe0:-O3:-cpp:-r8:-fp-model:precise:-align:all:-ftz:-fno-alias:-no-scalar-rep:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-Vaxlib:-lmpi           lcsgih parallel
59%memory            1500                                       lcsgih parallel
60#%tmp_data_catalog  /gfs2/work/<replace by your HLRN username>/palm_restart_data      lcsgih parallel
61#%tmp_user_catalog  /gfs2/tmp/<replace by your HLRN username>                         lcsgih parallel
[346]62#
63#
[754]64#
65%sgi_feature       ice2                                       lcsgih parallel trace
66%modules           intel.compiler/11.1.072:mpt:phdf5/1.8.5-mpt-intel-11.1:pnetcdf/4.1.1-mpt-intel-11.1  lcsgih parallel trace
67#%remote_username    <replace by your HLRN username>          lcsgih parallel trace
68%compiler_name     ifort                                      lcsgih parallel trace
69%compiler_name_ser ifort                                      lcsgih parallel trace
70%cpp_options       -DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf4:-D__mpi2   lcsgih parallel trace
71%netcdf_inc        -I:/sw/dataformats/pnetcdf/netcdf-4.1.1-mpt-intel-11.1/include:-I:/sw/dataformats/phdf5/hdf5-1.8.5-mpt-intel-11.1/include    lcsgih parallel trace
72%netcdf_lib        -L/sw/dataformats/pnetcdf/netcdf-4.1.1-mpt-intel-11.1/lib:-lnetcdf:-lnetcdff:-L/sw/dataformats/phdf5/hdf5-1.8.5-mpt-intel-11.1/lib:-lhdf5:-lhdf5_hl:-lz      lcsgih parallel trace
73%mopts             -j:4                                       lcsgih parallel trace
74%fopts             -openmp:-override-limits:-C:-ftrapuv:-xS:-debug:extended:-check:nooutput_conversion:-O0:-fpe0:-g:-traceback:-cpp:-r8:-fp-model:precise:-align:all:-ftz:-fno-alias:-no-scalar-rep:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-convert:little_endian  lcsgih parallel trace
75%lopts             -openmp:-C:-ftrapuv:-xS:-debug:extended:-check:nooutput_conversion:-O0:-fpe0:-g:-traceback:-cpp:-r8:-fp-model:precise:-align:all:-ftz:-fno-alias:-no-scalar-rep:-no-prec-div:-no-prec-sqrt:-ip:-nbs:-Vaxlib:-lmpi           lcsgih parallel trace
76%memory            1500                                       lcsgih parallel trace
77#%tmp_data_catalog  /gfs2/work/<replace by your HLRN username>/palm_restart_data      lcsgih parallel trace
78#%tmp_user_catalog  /gfs2/tmp/<replace by your HLRN username>                         lcsgih parallel trace
79#
80#
[346]81%write_binary                true                             restart
82#
83#----------------------------------------------------------------------------
[750]84# INPUT-commands, executed before running PALM - lines must start with "IC:"
[346]85#----------------------------------------------------------------------------
86#IC:
87#
88#----------------------------------------------------------------------------
89# ERROR-commands - executed when program terminates abnormally
90#----------------------------------------------------------------------------
91EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
92EC:pwd; ls -al
93#
94#----------------------------------------------------------------------------
95# OUTPUT-commands - executed when program terminates normally
96#----------------------------------------------------------------------------
97#
98# Combine 1D- and 3D-profile output (these files are not usable for plotting)
99OC:[[ -f LIST_PROFIL_1D     ]]  &&  cat  LIST_PROFIL_1D  >>  LIST_PROFILE
100OC:[[ -f LIST_PROFIL        ]]  &&  cat  LIST_PROFIL     >>  LIST_PROFILE
101#
102# Combine all particle information files
103OC:[[ -f PARTICLE_INFOS/_0000 ]]  &&  cat  PARTICLE_INFOS/* >> PARTICLE_INFO
104#
105#----------------------------------------------------------------------------
106# List of input-files
107#----------------------------------------------------------------------------
108PARIN                    in:job        d3#      $base_data/$fname/INPUT    _p3d
109PARIN                    in:job        d3f      $base_data/$fname/INPUT    _p3df
110TOPOGRAPHY_DATA          in:locopt     d3#:d3f  $base_data/$fname/INPUT    _topo
111BININ                    in:loc:flpe   d3f      $base_data/$fname/RESTART  _d3d
112PARTICLE_RESTART_DATA_IN in:loc:flpe   prtf     $base_data/$fname/RESTART  _rprt
113DATA_1D_PR_NETCDF        in:locopt     prf      $base_data/$fname/OUTPUT   _pr     nc
114DATA_1D_SP_NETCDF        in:locopt     spf      $base_data/$fname/OUTPUT   _sp     nc
115DATA_1D_TS_NETCDF        in:locopt     tsf      $base_data/$fname/OUTPUT   _ts     nc
116DATA_1D_PTS_NETCDF       in:locopt     ptsf     $base_data/$fname/OUTPUT   _pts    nc
117DATA_2D_XY_NETCDF        in:locopt     xyf      $base_data/$fname/OUTPUT   _xy     nc
118DATA_2D_XY_AV_NETCDF     in:locopt     xyf      $base_data/$fname/OUTPUT   _xy_av  nc
119DATA_2D_XZ_NETCDF        in:locopt     xzf      $base_data/$fname/OUTPUT   _xz     nc
120DATA_2D_YZ_NETCDF        in:locopt     yzf      $base_data/$fname/OUTPUT   _yz     nc
121DATA_3D_NETCDF           in:locopt     3df      $base_data/$fname/OUTPUT   _3d     nc
122DATA_PRT_NETCDF          in:locopt:pe  prtf     $base_data/$fname/OUTPUT   _prt
123#
124#----------------------------------------------------------------------------
125# List of output-files
126#----------------------------------------------------------------------------
127BINOUT                    out:loc:flpe restart   $base_data/$fname/RESTART  _d3d
128PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART  _rprt
129#
130RUN_CONTROL       out:loc:tr   d3#     $base_data/$fname/MONITORING  _rc
131RUN_CONTROL       out:loc:tra  d3f     $base_data/$fname/MONITORING  _rc
132HEADER            out:loc:tr   d3#     $base_data/$fname/MONITORING  _header
133HEADER            out:loc:tra  d3f     $base_data/$fname/MONITORING  _header
134CPU_MEASURES      out:loc:tr   d3#     $base_data/$fname/MONITORING  _cpu
135CPU_MEASURES      out:loc:tra  d3f     $base_data/$fname/MONITORING  _cpu
136#
137DATA_1D_PR_NETCDF    out:loc:tr   pr#:prf   $base_data/$fname/OUTPUT  _pr     nc
138DATA_1D_SP_NETCDF    out:loc:tr   sp#:spf   $base_data/$fname/OUTPUT  _sp     nc
139DATA_1D_TS_NETCDF    out:loc:tr   ts#:tsf   $base_data/$fname/OUTPUT  _ts     nc
140DATA_1D_PTS_NETCDF   out:loc:tr   pts#:ptsf $base_data/$fname/OUTPUT  _pts    nc
141DATA_2D_XY_NETCDF    out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy     nc
142DATA_2D_XY_AV_NETCDF out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy_av  nc
143DATA_2D_XZ_NETCDF    out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz     nc
144DATA_2D_XZ_AV_NETCDF out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz_av  nc
145DATA_2D_YZ_NETCDF    out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz     nc
146DATA_2D_YZ_AV_NETCDF out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz_av  nc
147DATA_3D_NETCDF       out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d     nc
148DATA_3D_AV_NETCDF    out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d_av  nc
149DATA_PRT_NETCDF      out:loc:pe   prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
150DATA_PRT_NETCDF      out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
[750]151DATA_DVR             out:loc:trpe dvr       $base_data/$fname/OUTPUT  _dvr
[346]152#
153DVRP_LOG          out:loc:tr   dv#       $base_data/$fname/MONITORING  _dvrp_log
154DVRP_LOG          out:loc:tra  dvf       $base_data/$fname/MONITORING  _dvrp_log
155PARTICLE_INFO     out:loc:tr   pt#       $base_data/$fname/MONITORING  _prt_info
156PARTICLE_INFO     out:loc:tra  ptf       $base_data/$fname/MONITORING  _prt_info
157PARTICLE_DATA     out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT      _prt_dat
158
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