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source: palm/trunk/SCRIPTS/.mrun.config.gfortran @ 2249

Last change on this file since 2249 was 2236, checked in by suehring, 7 years ago

Add NetCDF input file for topography
File size: 13.1 KB
Line 
1#$Id: .mrun.config.gfortran 1446 2014-08-07 10:08:56Z knoop $
2#column 1          column 2                                   column 3
3#name of variable  value of variable (~ must not be used)     scope
4#----------------------------------------------------------------------------
5%mainprog          palm.f90
6%base_directory    $HOME/palm/current_version
7%base_data         ~/palm/current_version/JOBS
8%source_path       $base_directory/trunk/SOURCE
9%add_source_path   $base_directory/USER_CODE/$fname
10%depository_path   $base_directory/MAKE_DEPOSITORY
11%use_makefile      true
12#
13# Enter your own host below by adding another line containing in the second
14# column your hostname (as provided by the unix command "hostname") and in the
15# third column the host identifier. Depending on your operating system, the
16# first characters of the host identifier should be "lc" (Linux cluster), "ibm"
17# (IBM-AIX), or "nec" (NEC-SX), respectively.
18#
19# The next line is just an example. Add your own line below or replace this line.
20%host_identifier   <replace_with_your_hostname>  <hi>
21#
22#
23# The next block contains all informations for compiling the PALM code
24# and for generating and running the PALM executable using MPI. Replace all
25# required paths (given in <>) by the respective paths valid on your host.
26# Also replace <hi> by your host identifier (for example "lcmy")
27# in each line!
28# Compilernames, cpp-options and compiler-options are assuming
29# an GNU-Compiler and mpich2 on this host! Please change
30# appropriately, if you are using a different compiler / MPI-Version.
31#
32#
33%remote_username   <replace_with_your_local_username>            <hi> parallel
34%tmp_user_catalog  $HOME/palm/tmp                                <hi> parallel
35%compiler_name     mpif90                                        <hi> parallel
36%compiler_name_ser gfortran                                      <hi> parallel
37%cpp_options       -cpp:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__lc:-D__netcdf:-D__parallel   <hi> parallel
38%netcdf_inc        -I:<replace_by_netcdf_include_path>           <hi> parallel
39%netcdf_lib        -L:<replace_by_netcdf_library_path>:-lnetcdf  <hi> parallel
40%mopts             -j:4                                          <hi> parallel
41%fopts             -Ofast                                        <hi> parallel
42%lopts             -Ofast                                        <hi> parallel
43# if you want to use your own hostfile, uncomment next line
44#%hostfile          $base_directory/.hostfile                    <hi> parallel
45# if you want to load modules on the remote host, use the following line
46#%modules           <replace_by_the_modules_to_be_loaded>        <hi> parallel
47# if you want to perform initial commands on ssh connections, use the following line
48#%login_init_cmd    <replace_by_the_inital_commands>             <hi> parallel
49#
50#
51%remote_username   <replace_with_your_local_username>            <hi> parallel trace
52%tmp_user_catalog  $HOME/palm/tmp                                <hi> parallel trace
53%compiler_name     mpif90                                        <hi> parallel trace
54%compiler_name_ser gfortran                                      <hi> parallel trace
55%cpp_options       -cpp:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__lc:-D__netcdf:-D__parallel   <hi> parallel trace
56%netcdf_inc        -I:<replace_by_netcdf_include_path>           <hi> parallel trace
57%netcdf_lib        -L:<replace_by_netcdf_library_path>:-lnetcdf  <hi> parallel trace
58%mopts             -j:4                                          <hi> parallel trace
59%fopts             -O0:-Wall:-fbacktrace                         <hi> parallel trace
60%lopts             -O0:-Wall:-fbacktrace                         <hi> parallel trace
61# if you want to use your own hostfile, uncomment next line
62#%hostfile          $base_directory/.hostfile                    <hi> parallel trace
63# if you want to load modules on the remote host, use the following line
64#%modules           <replace_by_the_modules_to_be_loaded>        <hi> parallel trace
65# if you want to perform initial commands on ssh connections, use the following line
66#%login_init_cmd    <replace_by_the_inital_commands>             <hi> parallel trace
67#
68#
69%write_binary                true                             restart
70#
71#----------------------------------------------------------------------------
72# INPUT-commands, executed before running PALM - lines must start with "IC:"
73#----------------------------------------------------------------------------
74#IC:
75#
76#----------------------------------------------------------------------------
77# ERROR-commands - executed when program terminates abnormally
78#----------------------------------------------------------------------------
79EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
80EC:pwd; ls -al
81#
82#----------------------------------------------------------------------------
83# OUTPUT-commands - executed when program terminates normally
84#----------------------------------------------------------------------------
85#
86# Combine 1D- and 3D-profile output (these files are not usable for plotting)
87OC:[[ -f LIST_PROFIL_1D     ]]  &&  cat  LIST_PROFIL_1D  >>  LIST_PROFILE
88OC:[[ -f LIST_PROFIL        ]]  &&  cat  LIST_PROFIL     >>  LIST_PROFILE
89#
90# Combine all particle information files
91OC:[[ -f PARTICLE_INFOS/_0000 ]]  &&  cat  PARTICLE_INFOS/* >> PARTICLE_INFO
92#
93#----------------------------------------------------------------------------
94# List of input-files
95#----------------------------------------------------------------------------
96PARIN                    in:job        d3#      $base_data/$fname/INPUT    _p3d
97PARIN                    in:job        d3f      $base_data/$fname/INPUT    _p3df
98TOPOGRAPHY_DATA          in:locopt     d3#:d3f  $base_data/$fname/INPUT    _topo
99TOPOGRAPHY_DATA_NC       in:locopt     d3#:d3f  $base_data/$fname/INPUT    _topo_nc
100NUDGING_DATA             in:locopt     d3#:d3f  $base_data/$fname/INPUT    _nudge
101LSF_DATA                 in:locopt     d3#:d3f  $base_data/$fname/INPUT    _lsf
102WTM_DATA                 in:locopt     d3#:d3f  $base_data/$fname/INPUT    _wtm
103BININ                    in:loc:flpe   d3f      $base_data/$fname/RESTART  _d3d
104PARTICLE_RESTART_DATA_IN in:loc:flpe   prtf     $base_data/$fname/RESTART  _rprt
105DATA_1D_FL_NETCDF        in:locopt     flf      $base_data/$fname/OUTPUT   _fl     nc
106DATA_1D_PR_NETCDF        in:locopt     prf      $base_data/$fname/OUTPUT   _pr     nc
107DATA_1D_SP_NETCDF        in:locopt     spf      $base_data/$fname/OUTPUT   _sp     nc
108DATA_1D_TS_NETCDF        in:locopt     tsf      $base_data/$fname/OUTPUT   _ts     nc
109DATA_1D_PTS_NETCDF       in:locopt     ptsf     $base_data/$fname/OUTPUT   _pts    nc
110DATA_2D_XY_NETCDF        in:locopt     xyf      $base_data/$fname/OUTPUT   _xy     nc
111DATA_2D_XY_AV_NETCDF     in:locopt     xyf      $base_data/$fname/OUTPUT   _xy_av  nc
112DATA_2D_XZ_NETCDF        in:locopt     xzf      $base_data/$fname/OUTPUT   _xz     nc
113DATA_2D_YZ_NETCDF        in:locopt     yzf      $base_data/$fname/OUTPUT   _yz     nc
114DATA_3D_NETCDF           in:locopt     3df      $base_data/$fname/OUTPUT   _3d     nc
115DATA_PRT_NETCDF          in:locopt:pe  prtf     $base_data/$fname/OUTPUT   _prt
116#
117#----------------------------------------------------------------------------
118# List of output-files
119#----------------------------------------------------------------------------
120BINOUT                    out:loc:flpe restart   $base_data/$fname/RESTART  _d3d
121PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART  _rprt
122#
123RUN_CONTROL       out:loc:tr   d3#     $base_data/$fname/MONITORING  _rc
124RUN_CONTROL       out:loc:tra  d3f     $base_data/$fname/MONITORING  _rc
125HEADER            out:loc:tr   d3#     $base_data/$fname/MONITORING  _header
126HEADER            out:loc:tra  d3f     $base_data/$fname/MONITORING  _header
127CPU_MEASURES      out:loc:tr   d3#     $base_data/$fname/MONITORING  _cpu
128CPU_MEASURES      out:loc:tra  d3f     $base_data/$fname/MONITORING  _cpu
129TURBINE_PARAMETERS01  out:loc:tr  d3#:d3f   $base_data/$fname/MONITORING  _turbine_parameters01
130TURBINE_PARAMETERS02  out:loc:tr  d3#:d3f   $base_data/$fname/MONITORING  _turbine_parameters02
131TURBINE_PARAMETERS03  out:loc:tr  d3#:d3f   $base_data/$fname/MONITORING  _turbine_parameters03
132TURBINE_PARAMETERS04  out:loc:tr  d3#:d3f   $base_data/$fname/MONITORING  _turbine_parameters04
133#
134DATA_1D_FL_NETCDF    out:loc:tr   fl#:flf   $base_data/$fname/OUTPUT  _fl     nc
135DATA_1D_PR_NETCDF    out:loc:tr   pr#:prf   $base_data/$fname/OUTPUT  _pr     nc
136DATA_1D_SP_NETCDF    out:loc:tr   sp#:spf   $base_data/$fname/OUTPUT  _sp     nc
137DATA_1D_TS_NETCDF    out:loc:tr   ts#:tsf   $base_data/$fname/OUTPUT  _ts     nc
138DATA_1D_PTS_NETCDF   out:loc:tr   pts#:ptsf $base_data/$fname/OUTPUT  _pts    nc
139DATA_2D_XY_NETCDF    out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy     nc
140DATA_2D_XY_AV_NETCDF out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy_av  nc
141DATA_2D_XZ_NETCDF    out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz     nc
142DATA_2D_XZ_AV_NETCDF out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz_av  nc
143DATA_2D_YZ_NETCDF    out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz     nc
144DATA_2D_YZ_AV_NETCDF out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz_av  nc
145DATA_3D_NETCDF       out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d     nc
146DATA_3D_AV_NETCDF    out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d_av  nc
147DATA_MASK_01_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01     nc
148DATA_MASK_01_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01_av  nc
149DATA_MASK_02_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02     nc
150DATA_MASK_02_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02_av  nc
151DATA_MASK_03_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03     nc
152DATA_MASK_03_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03_av  nc
153DATA_MASK_04_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04     nc
154DATA_MASK_04_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04_av  nc
155DATA_MASK_05_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05     nc
156DATA_MASK_05_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05_av  nc
157DATA_MASK_06_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06     nc
158DATA_MASK_06_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06_av  nc
159DATA_MASK_07_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07     nc
160DATA_MASK_07_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07_av  nc
161DATA_MASK_08_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08     nc
162DATA_MASK_08_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08_av  nc
163DATA_MASK_09_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09     nc
164DATA_MASK_09_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09_av  nc
165DATA_MASK_10_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10     nc
166DATA_MASK_10_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10_av  nc
167DATA_MASK_11_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11     nc
168DATA_MASK_11_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11_av  nc
169DATA_MASK_12_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12     nc
170DATA_MASK_12_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12_av  nc
171DATA_MASK_13_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13     nc
172DATA_MASK_13_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13_av  nc
173DATA_MASK_14_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14     nc
174DATA_MASK_14_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14_av  nc
175DATA_MASK_15_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15     nc
176DATA_MASK_15_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15_av  nc
177DATA_MASK_16_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16     nc
178DATA_MASK_16_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16_av  nc
179DATA_MASK_17_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17     nc
180DATA_MASK_17_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17_av  nc
181DATA_MASK_18_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18     nc
182DATA_MASK_18_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18_av  nc
183DATA_MASK_19_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19     nc
184DATA_MASK_19_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19_av  nc
185DATA_MASK_20_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20     nc
186DATA_MASK_20_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20_av  nc
187DATA_PRT_NETCDF      out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
188DATA_DVR             out:loc:trpe dvr       $base_data/$fname/OUTPUT  _dvr
189#
190DVRP_LOG          out:loc:tr   dv#       $base_data/$fname/MONITORING  _dvrp_log
191DVRP_LOG          out:loc:tra  dvf       $base_data/$fname/MONITORING  _dvrp_log
192PARTICLE_INFO     out:loc:tr   pt#       $base_data/$fname/MONITORING  _prt_info
193PARTICLE_INFO     out:loc:tra  ptf       $base_data/$fname/MONITORING  _prt_info
194PARTICLE_DATA     out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT      _prt_dat
195# A BLANK LINE MUST FOLLOW
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