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source: palm/trunk/SCRIPTS/.mrun.config.default @ 415

Last change on this file since 415 was 410, checked in by letzel, 15 years ago
  • reintegrate branch letzel/masked_output into trunk; new funtionality: masked data output (not yet documented)
File size: 10.6 KB
RevLine 
[1]1#column 1          column 2                                   column 3
2#name of variable  value of variable (~ must not be used)     scope
3#----------------------------------------------------------------------------
4%mainprog          palm.f90
[40]5%base_directory    $HOME/palm/current_version
6%base_data         ~/palm/current_version/JOBS
7%source_path       $base_directory/trunk/SOURCE
[1]8%add_source_path   $base_directory/USER_CODE/$fname
9%depository_path   $base_directory/MAKE_DEPOSITORY
10%use_makefile      true
11#
[83]12# Enter your own host below by adding another line containing in the second
13# column your hostname (as provided by the unix command "hostname") and in the
[246]14# third column the host identifier. Depending on your operating system, the
15# first characters of the host identifier should be "lc" (Linux cluster), "ibm"
[83]16# (IBM-AIX), or "nec" (NEC-SX), respectively.
17#
[246]18# The next line is just an example. Add your own line below or replace this line.
19%host_identifier   myhostname  lcmy
[1]20#
21#
[246]22# The next block contains all informations for compiling the PALM code
23# and for generating and running the PALM executable using MPI. Replace all
24# required paths (given in <>) by the respective paths valid on your host.
25# Also replace <hi> by your host identifier (see above) in each line!
26# Compilernames, cpp-options and compiler-options are assuming
27# an Intel-Compiler and mpich2 on this host! Please change
28# appropriately, if you are using a different compiler / MPI-Version.
[1]29#
[246]30%tmp_user_catalog  /tmp                                          <hi> parallel
31%compiler_name     mpif90                                        <hi> parallel
32%compiler_name_ser ifort                                         <hi> parallel
[260]33%cpp_options       -D__mpi2:-DMPI_REAL=MPI_DOUBLE_PRECISION:-DMPI_2REAL=MPI_2DOUBLE_PRECISION:-D__netcdf:-D__netcdf_64bit   <hi> parallel
[246]34%netcdf_inc        -I:<replace by netcdf include path>           <hi> parallel
35%netcdf_lib        -L<replace by netcdf library path>:-lnetcdf   <hi> parallel
[260]36%fopts             -axW:-cpp:-r8:-nbs:-convert:little_endian:-I:<replace by mpi include path>   <hi> parallel
37%lopts             -axW:-cpp:-r8:-nbs:-Vaxlib:-L:<replace by mpi library path>                  <hi> parallel
[246]38# if you want to use your own hostfile, uncomment next line
39#%hostfile          $base_directory/.hostfile                    <hi> parallel
40# if you want this host to be used as a remote host, uncomment next line
41#%remote_username   <replace by your username on this host>      <hi> parallel
[181]42#
[1]43%write_binary                true                             restart
44#
45#----------------------------------------------------------------------------
46# INPUT-commands, executed before running PALM - lines must start with "IC:"
47#----------------------------------------------------------------------------
[246]48#IC:
[1]49#
50#----------------------------------------------------------------------------
51# ERROR-commands - executed when program terminates abnormally
52#----------------------------------------------------------------------------
53EC:[[ \$locat = execution ]]  &&  cat  RUN_CONTROL
[246]54EC:pwd; ls -al
[1]55#
56#----------------------------------------------------------------------------
57# OUTPUT-commands - executed when program terminates normally
58#----------------------------------------------------------------------------
59#
60# Combine 1D- and 3D-profile output (these files are not usable for plotting)
61OC:[[ -f LIST_PROFIL_1D     ]]  &&  cat  LIST_PROFIL_1D  >>  LIST_PROFILE
62OC:[[ -f LIST_PROFIL        ]]  &&  cat  LIST_PROFIL     >>  LIST_PROFILE
63#
64# Combine all particle information files
65OC:[[ -f PARTICLE_INFOS/_0000 ]]  &&  cat  PARTICLE_INFOS/* >> PARTICLE_INFO
66#
[246]67# Collect plot data (2d/3d) into one file
68OC:combine_plot_fields.x
[1]69#
70#----------------------------------------------------------------------------
71# List of input-files
72#----------------------------------------------------------------------------
[255]73PARIN                    in:job        d3#      $base_data/$fname/INPUT    _p3d
74PARIN                    in:job        d3f      $base_data/$fname/INPUT    _p3df
75TOPOGRAPHY_DATA          in:locopt     d3#:d3f  $base_data/$fname/INPUT    _topo
76BININ                    in:loc:flpe   d3f      $base_data/$fname/RESTART  _d3d
77PARTICLE_RESTART_DATA_IN in:loc:flpe   prtf     $base_data/$fname/RESTART  _rprt
78DATA_1D_PR_NETCDF        in:locopt     prf      $base_data/$fname/OUTPUT   _pr     nc
79DATA_1D_SP_NETCDF        in:locopt     spf      $base_data/$fname/OUTPUT   _sp     nc
80DATA_1D_TS_NETCDF        in:locopt     tsf      $base_data/$fname/OUTPUT   _ts     nc
81DATA_1D_PTS_NETCDF       in:locopt     ptsf     $base_data/$fname/OUTPUT   _pts    nc
82DATA_2D_XY_NETCDF        in:locopt     xyf      $base_data/$fname/OUTPUT   _xy     nc
83DATA_2D_XY_AV_NETCDF     in:locopt     xyf      $base_data/$fname/OUTPUT   _xy_av  nc
84DATA_2D_XZ_NETCDF        in:locopt     xzf      $base_data/$fname/OUTPUT   _xz     nc
85DATA_2D_YZ_NETCDF        in:locopt     yzf      $base_data/$fname/OUTPUT   _yz     nc
86DATA_3D_NETCDF           in:locopt     3df      $base_data/$fname/OUTPUT   _3d     nc
87DATA_PRT_NETCDF          in:locopt:pe  prtf     $base_data/$fname/OUTPUT   _prt
[1]88#
89#----------------------------------------------------------------------------
90# List of output-files
91#----------------------------------------------------------------------------
[18]92BINOUT                    out:loc:flpe restart   $base_data/$fname/RESTART  _d3d
93PARTICLE_RESTART_DATA_OUT out:loc:flpe prt#:prtf $base_data/$fname/RESTART  _rprt
[1]94#
[18]95RUN_CONTROL       out:loc:tr   d3#     $base_data/$fname/MONITORING  _rc
96RUN_CONTROL       out:loc:tra  d3f     $base_data/$fname/MONITORING  _rc
97HEADER            out:loc:tr   d3#     $base_data/$fname/MONITORING  _header
98HEADER            out:loc:tra  d3f     $base_data/$fname/MONITORING  _header
99CPU_MEASURES      out:loc:tr   d3#     $base_data/$fname/MONITORING  _cpu
100CPU_MEASURES      out:loc:tra  d3f     $base_data/$fname/MONITORING  _cpu
[1]101#
[18]102DATA_1D_PR_NETCDF    out:loc:tr   pr#:prf   $base_data/$fname/OUTPUT  _pr     nc
103DATA_1D_SP_NETCDF    out:loc:tr   sp#:spf   $base_data/$fname/OUTPUT  _sp     nc
104DATA_1D_TS_NETCDF    out:loc:tr   ts#:tsf   $base_data/$fname/OUTPUT  _ts     nc
105DATA_1D_PTS_NETCDF   out:loc:tr   pts#:ptsf $base_data/$fname/OUTPUT  _pts    nc
106DATA_2D_XY_NETCDF    out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy     nc
107DATA_2D_XY_AV_NETCDF out:loc:tr   xy#:xyf   $base_data/$fname/OUTPUT  _xy_av  nc
108DATA_2D_XZ_NETCDF    out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz     nc
109DATA_2D_XZ_AV_NETCDF out:loc:tr   xz#:xzf   $base_data/$fname/OUTPUT  _xz_av  nc
110DATA_2D_YZ_NETCDF    out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz     nc
111DATA_2D_YZ_AV_NETCDF out:loc:tr   yz#:yzf   $base_data/$fname/OUTPUT  _yz_av  nc
112DATA_3D_NETCDF       out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d     nc
113DATA_3D_AV_NETCDF    out:loc:tr   3d#:3df   $base_data/$fname/OUTPUT  _3d_av  nc
[410]114DATA_MASK_01_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01     nc
115DATA_MASK_01_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m01_av  nc
116DATA_MASK_02_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02     nc
117DATA_MASK_02_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m02_av  nc
118DATA_MASK_03_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03     nc
119DATA_MASK_03_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m03_av  nc
120DATA_MASK_04_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04     nc
121DATA_MASK_04_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m04_av  nc
122DATA_MASK_05_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05     nc
123DATA_MASK_05_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m05_av  nc
124DATA_MASK_06_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06     nc
125DATA_MASK_06_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m06_av  nc
126DATA_MASK_07_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07     nc
127DATA_MASK_07_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m07_av  nc
128DATA_MASK_08_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08     nc
129DATA_MASK_08_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m08_av  nc
130DATA_MASK_09_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09     nc
131DATA_MASK_09_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m09_av  nc
132DATA_MASK_10_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10     nc
133DATA_MASK_10_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m10_av  nc
134DATA_MASK_11_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11     nc
135DATA_MASK_11_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m11_av  nc
136DATA_MASK_12_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12     nc
137DATA_MASK_12_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m12_av  nc
138DATA_MASK_13_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13     nc
139DATA_MASK_13_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m13_av  nc
140DATA_MASK_14_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14     nc
141DATA_MASK_14_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m14_av  nc
142DATA_MASK_15_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15     nc
143DATA_MASK_15_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m15_av  nc
144DATA_MASK_16_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16     nc
145DATA_MASK_16_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m16_av  nc
146DATA_MASK_17_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17     nc
147DATA_MASK_17_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m17_av  nc
148DATA_MASK_18_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18     nc
149DATA_MASK_18_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m18_av  nc
150DATA_MASK_19_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19     nc
151DATA_MASK_19_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m19_av  nc
152DATA_MASK_20_NETCDF    out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20     nc
153DATA_MASK_20_AV_NETCDF out:loc:tr ma#:maf   $base_data/$fname/OUTPUT  _m20_av  nc
[18]154DATA_PRT_NETCDF      out:loc:pe   prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
155DATA_PRT_NETCDF      out:loc:trpe prt#:prtf $base_data/$fname/OUTPUT  _prt    nc
[272]156DATA_DVR             out:loc:trpe dvr       $base_data/$fname/OUTPUT  _dvr
[1]157#
[246]158DVRP_LOG          out:loc:tr   dv#       $base_data/$fname/MONITORING  _dvrp_log
159DVRP_LOG          out:loc:tra  dvf       $base_data/$fname/MONITORING  _dvrp_log
160PARTICLE_INFO     out:loc:tr   pt#       $base_data/$fname/MONITORING  _prt_info
161PARTICLE_INFO     out:loc:tra  ptf       $base_data/$fname/MONITORING  _prt_info
162PARTICLE_DATA     out:loc:flpe prt#:prtf $base_data/$fname/OUTPUT      _prt_dat
[18]163
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